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Information for RPM R-qtl-1.66-5.fc41.src.rpm

ID	1430807
Name	R-qtl
Version	1.66
Release	5.fc41
Epoch
Arch	src
Summary	Tools for analyzing QTL experiments
Description	R-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
Build Time	2024-08-13 19:20:25 GMT
Size	4.00 MB
SIGMD5	dcc1ba828d5dcdf137f96bd2aa9bb2e3
License	GPL-3.0-only
Buildroot	f41-build-840745-160865
Provides	R-qtl = 1.66-5.fc41
Obsoletes	No Obsoletes
Conflicts	No Conflicts
Requires	R-core-devel >= 3.1.1 R-grDevices R-graphics R-parallel R-rpm-macros R-stats R-testthat R-utils gcc-c++ make rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 tex(fancyhdr.sty) tex(fullpage.sty) tex(inconsolata.sty) tex(latex)
Recommends	No Recommends
Suggests	No Suggests
Supplements	No Supplements
Enhances	No Enhances
Files	1 through 2 of 2 Name Size R-qtl.spec 13.96 KB qtl_1.66.tar.gz 4.06 MB
Component of	No Buildroots