Information for RPM python-probeinterface-0.2.20-2.fc40.src.rpm
ID | 1155702 | ||||||||||||||||||||||||||
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Name | python-probeinterface | ||||||||||||||||||||||||||
Version | 0.2.20 | ||||||||||||||||||||||||||
Release | 2.fc40 | ||||||||||||||||||||||||||
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Arch | src | ||||||||||||||||||||||||||
Summary | Handles probe layout, geometry, and wiring to device | ||||||||||||||||||||||||||
Description | A Python package to handle the layout, geometry, and wiring of silicon probes for extracellular electrophysiology experiments. Goals Make a lightweight package to handle: • probe contact geometry (both 2D and 3D layouts) • probe shape (contour of the probe, shape of channel contact, …) • probe wiring to device (the physical layout often doesn’t match the channel ordering) • combining several probes into a device with global geometry + global wiring • exporting probe geometry data into JSON files • loading existing probe geometry files (Neuronexus, imec, Cambridge Neurotech…) Started here Bonus: • optional plotting (based on matplotlib) • load/save geometry using common formats (PRB, CSV, NWB, …) • handle SI length units correctly um/mm/… Target users/project: • spikeinterface team: integrate this into spikeextractor for channel location • neo team: handle array_annotations for AnalogSignal • spikeforest team: use this package for plotting probe activity • phy team: integrate for probe display • spyking-circus team: handle probe with this package • kilosort team: handle probe with this package • tridesclous team: handle probe with this package • open ephys team: automatically generate channel map configuration files | ||||||||||||||||||||||||||
Build Time | 2023-12-18 19:20:22 GMT | ||||||||||||||||||||||||||
Size | 1.68 MB | ||||||||||||||||||||||||||
648948b198a17aa9dc3e2f13496408aa | |||||||||||||||||||||||||||
License | MIT | ||||||||||||||||||||||||||
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Component of | No Buildroots |