Tue, 21 May 2024 09:14:54 UTC | login

Information for build R-qtl-1.42.8-2.fc29

ID63804
Package NameR-qtl
Version1.42.8
Release2.fc29
Epoch
SummaryTools for analyzing QTL experiments
DescriptionR-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
Built bydavidlt
State complete
Volume DEFAULT
StartedSat, 21 Jul 2018 03:17:08 UTC
CompletedSat, 21 Jul 2018 10:04:54 UTC
Taskbuild (f29-candidate, R-qtl-1.42.8-2.fc29.src.rpm)
Tags
f29
f30
f31
RPMs
src
R-qtl-1.42.8-2.fc29.src.rpm (info) (download)
riscv64
R-qtl-1.42.8-2.fc29.riscv64.rpm (info) (download)
R-qtl-debuginfo-1.42.8-2.fc29.riscv64.rpm (info) (download)
R-qtl-debugsource-1.42.8-2.fc29.riscv64.rpm (info) (download)
Logs
riscv64
build.log
hw_info.log
mock_output.log
root.log
state.log
Changelog * Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.42.8-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Thu May 17 2018 Tom Callaway <spot@fedoraproject.org> - 1.42.8-1 - update to 1.42-8 * Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.41.6-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.41.6-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.41.6-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Fri Jun 16 2017 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.41.6-1 - Update to 1.41.6 - Add BuildRequires on R-testthat for Fedora (not available in EPEL) - EPEL 5 End-Of-Life specfile clean-up - Remove Group and BuildRoot tags - Remove license macro definition - Don't clear the buildroot in the install section - Remove the clean section * Wed May 31 2017 Tom Callaway <spot@fedoraproject.org> - 1.40.8-3 - rebuild for R 3.4.0 * Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.40.8-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Wed Nov 30 2016 Mattias Ellert <mattias.ellert@physast.uu.se> - 1.40.8-1 - Update to 1.40.8