Information for build R-ape-5.1-2.fc29
| ID | 62137 | |||||||||||
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| Package Name | R-ape | |||||||||||
| Version | 5.1 | |||||||||||
| Release | 2.fc29 | |||||||||||
| Epoch | ||||||||||||
| Summary | Analyses of Phylogenetics and Evolution | |||||||||||
| Description | Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R. | |||||||||||
| Built by | davidlt | |||||||||||
| State | complete | |||||||||||
| Volume | DEFAULT | |||||||||||
| Started | Thu, 19 Jul 2018 23:52:44 UTC | |||||||||||
| Completed | Fri, 20 Jul 2018 02:04:43 UTC | |||||||||||
| Task | build (f29-candidate, R-ape-5.1-2.fc29.src.rpm) | |||||||||||
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| Changelog | * Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 5.1-1 - update to 5.1, rebuild for R 3.5.0 * Fri Mar 23 2018 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.0-1 - initial package for Fedora |
