| Changelog |
* Mon Mar 19 2018 Christoph Junghans <junghans@votca.org> - 2018.1-1
- Bump to version 2018.1 (bug #1559202)
* Sat Feb 24 2018 Christoph Junghans <junghans@votca.org> - 2018-1.2
- add gcc-c++ as BuildRequires
- use bundled tinyml2 to build tests, system one is too new
* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2018-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Fri Jan 19 2018 Christoph Junghans <junghans@votca.org> - 2018-1
- Update to 2018
- Drop 43a0002.diff, merged upstream
* Sat Dec 30 2017 Christoph Junghans <junghans@votca.org> - 2018-0.2rc1
- Update to 2018-rc1 for testing
- Update b7713bf.diff to 43a0002.diff
* Mon Dec 25 2017 Christoph Junghans <junghans@votca.org> - 2018-0.1beta3
- Update to 2018-beta3 for testing
- Disable HardwareTopologyTest.NumaCacheSelfconsistency test on aarch64
- Run regressiontests for serial build (don't work for mpi build)
- Clean up
- Drop execstack as everything is intristic now
- No la .files anymore, so drop find -delete
- OpenMPI was ported to s390, so enable it everywhere
* Fri Sep 15 2017 Christoph Junghans <junghans@votca.org> - 2016.4-1
- Update to 2016.4
* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2016.3-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2016.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Tue Mar 14 2017 Christoph Junghans <junghans@votca.org> - 2016.3-1
- Update to 2016.3
* Tue Feb 07 2017 Christoph Junghans <junghans@votca.org> - 2016.2-1
- Update to 2016.2
- Drop boost dependency, not uses anymore
- Drop gromacs-tng.patch, made it upstream
* Fri Jan 27 2017 Jonathan Wakely <jwakely@redhat.com> - 2016.1-3
- Rebuilt for Boost 1.63
* Fri Dec 23 2016 Christoph Junghans <junghans@votca.org> - 2016.1-2
- fixed wording description
- drop dangerous GMXRC* - not needed when installed in /usr
would prepent /usr/lib in LD_LIBRARY_PATH
-drop otherwise empty zsh/csh package as actual completion is done in 2016
nothing left in package after removing GMXRC.*
- fix location of bash-completion
- added GMX_USE_RDTSCP=OFF for docker, which has not support of rdtscp yet
* Thu Nov 03 2016 Christoph Junghans <junghans@votca.org> - 2016.1-1
- Update to 2016.1
- Drop gromacs-use-system-lmfit.patch, made it upstream
- Update gromacs-tng.patch, https://gerrit.gromacs.org/#/c/6319/
* Fri Oct 21 2016 Orion Poplawski <orion@cora.nwra.com>
- Rebuild for openmpi 2.0
* Tue Aug 23 2016 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 2016-1
- update to 2016 release
- drop upstreamed patches
- fix build with system lmfit
- fix build with bundled tng removed
- drop pocl from BuildRequires, it's not required to build
- enable OpenCL on all arches (except ppc64le, where it's still failing)
* Sat May 21 2016 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 2016-0.5.20160510gitd44d7d6
- unbundle tinyxml2
* Sun Apr 10 2016 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 2016-0.4.20160510gitd44d7d6
- update from git master
- enable OpenCL on armv7hl and BR: pocl >= 0.13-4 (#1324438)
- drop libxml2 BR (upstream switched to bundled tinyxml2-3.0.0)
- add missing arches in arch-dependent sections
* Wed Apr 06 2016 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 2016-0.3.20160403gitd6e35c9
- re-enable OpenCL (pocl was fixed recently)
* Mon Apr 04 2016 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 2016-0.2.20160403gitd6e35c9
- update to git master branch
- drop obsolete patches
- enable NEON instructions on armv7hnl arch
- drop condition around execstack usage, it's available everywhere now
* Fri Mar 18 2016 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 2016-0.1.20160318gitbec9c87
- update to git master branch
- disable OpenCL for now (due to pocl FTBFS #1307869)
- use BOOL with all boolean cmake options
- enable hwloc support
- don't install OpenCL kernels by default (but recommend them)
- unbundle lmfit (F24+), tng
- don't build shared libs for MPI builds
- drop -libs and -devel MPI subpackages
- disable failing tests on arm and i686
* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.1-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Tue Nov 17 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.1.1-1
- update to 5.1.1
* Wed Sep 23 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.1-6
- don't remove -DNDEBUG from CFLAGS (makes HandlesPermuteModifier test fail
randomly)
- convert shell variables to rpm macros
- enable OpenCL support (x86 and single precision only)
* Tue Sep 22 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.1-5
- disable HandlesPermuteModifier test which fails randomly on i686
* Tue Sep 15 2015 Orion Poplawski <orion@cora.nwra.com> - 5.1-4
- Rebuild for openmpi 1.10.0
* Thu Aug 27 2015 Jonathan Wakely <jwakely@redhat.com> - 5.1-3
- Rebuilt for Boost 1.59
* Wed Aug 19 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.1-2
- enable NEON SIMD on aarch64
- fix compilation of VSX code with double precision on ppc64le
- enable VSX on ppc64le only
- don't manually output testuite logs upon failure, ctest does that already
* Sat Aug 15 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.1-1
- update to 5.1
- drop ancient Obsoletes:/Provides:
- drop Group: tags
- build mdrun-only MPI binaries again
- simplify SIMD enablement handling
- enable SIMD on ppc64(le)
- no execstack on ppc64 or s390(x), either
- output testsuite logs upon failure
* Sat Aug 15 2015 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 5.0.6-6
- Rebuild for MPI provides
* Mon Aug 10 2015 Sandro Mani <manisandro@gmail.com> - 5.0.6-5
- Rebuild for RPM MPI Requires Provides Change
* Thu Aug 06 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.0.6-4
- fix up dependencies between subpackages
* Thu Aug 06 2015 Jonathan Wakely <jwakely@redhat.com> 5.0.6-3
- Rebuilt for Boost 1.58
* Wed Jul 29 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 5.0.6-2
- Rebuilt for https://fedoraproject.org/wiki/Changes/F23Boost159
* Sun Jul 26 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.0.6-1
- update to 5.0.6
* Wed Jul 22 2015 David Tardon <dtardon@redhat.com> - 5.0.5-4
- rebuild for Boost 1.58
* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 5.0.5-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Mon Jun 15 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.0.5-2
- obsolete old -common subpackage in -doc so that users don't lose the manual
* Sat Jun 13 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.0.5-1
- update to 5.0.5
- fix path to packaged dssp
- drop upstreamed patch
- move the large manual into a separate -doc subpackage
* Tue Apr 14 2015 Dominik 'Rathann' Mierzejewski <rpm@greysector.net> - 5.0.4-1
- update to 5.0.4
- switch Motif library to original Motif (as it's in Fedora since long)
- link against new-style atlas library (atlas 3.10.1+)
- BR: boost-devel
- csh/zsh completion removed upstream
- move bash completion into main package
- separate ngmx and mdrun dropped upstream
- enable testsuite
- factorize a lot of build logic
- drop redundant comments
- skip double precision tests on i686 (http://redmine.gromacs.org/issues/1716)
* Mon Apr 13 2015 Dominik Mierzejewski <rpm@greysector.net> - 4.6.5-6
- rebuilt for changed mpich libraries
* Sat Aug 16 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.6.5-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Fri Jun 13 2014 Peter Robinson <pbrobinson@fedoraproject.org> 4.6.5-4
- Fix builds on aarch64/ppc64le
- Modernise spec
- Remove ancient obsoletes
* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.6.5-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Sat Feb 22 2014 Deji Akingunola <dakingun@gmail.com> - 4.6.5-2
- Rebuild for mpich-3.1
* Tue Dec 03 2013 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6.5-1
- Update to 4.6.5.
* Thu Nov 14 2013 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6.4-1
- Update to 4.6.4.
* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.6.3-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Sat Jul 20 2013 Deji Akingunola <dakingun@gmail.com> - 4.6.3-2
- Rename mpich2 sub-packages to mpich and rebuild for mpich-3.0
* Sat Jul 06 2013 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6.3-1
- Update to 4.6.3.
* Tue Jun 04 2013 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6.2-1
- Update to 4.6.2.
* Wed Mar 06 2013 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6.1-1
- Update to 4.6.1.
* Thu Feb 14 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.6-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Mon Jan 21 2013 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6-1
- Update to stable 4.6 release.
* Mon Dec 31 2012 Dan Horák <dan[at]danny.cz> - 4.6-0.2.beta3
- fix build on non-x86 arches
* Mon Dec 24 2012 Susi Lehtola <jussilehtola@fedoraproject.org> - 4.6-0.1.beta3
- Update to 4.6 beta 3.
* Fri Nov 02 2012 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.5-3.1
- Bump due to MPICH2 update.
* Thu Jul 19 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.5.5-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
* Fri Jan 13 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.5.5-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild
* Tue Sep 20 2011 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.5-1
- Update to 4.5.5.
* Wed Mar 30 2011 Deji Akingunola <dakingun@gmail.com> - 4.5.4-2
- Rebuild for mpich2 soname bump
* Wed Mar 23 2011 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.4-1
- Update to 4.5.4.
* Sun Feb 13 2011 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.3-4
- Get rid of executable stacks.
* Mon Feb 07 2011 Dan Horák <dan[at]danny.cz> - 4.5.3-3
- conditionalize OpenMPI support
- fix build on 64-bit platforms
* Mon Dec 20 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.3-2
- Fix rest of BZ #649338.
* Thu Nov 18 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.3-1
- Update to 4.5.3.
* Fri Nov 05 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.2-3
- Rebuild due to libxml2 soname bump.
* Wed Nov 03 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.2-2
- Make gromacs package obsolete older versions of gromacs package due to the
branching of libraries.
* Mon Nov 01 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.2-1
- Update to 4.5.2.
* Wed Oct 27 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.1-2
- Patch around #644950.
- Split libraries in own packages to avoid multilib problems.
* Sat Oct 09 2010 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.5.1-1
- Update to 4.5.1.
* Sun Dec 06 2009 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.0.7-1
- Update to 4.0.7.
* Sun Dec 06 2009 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.0.6-1
- Update to 4.0.6.
* Fri Dec 04 2009 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.0.5-6
- Fix file conflict.
* Tue Dec 01 2009 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.0.5-5
- Put correct MPI devel package requires in place.
* Tue Dec 01 2009 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.0.5-4
- Fix obsoletes.
* Mon Nov 30 2009 Jussi Lehtola <jussilehtola@fedoraproject.org> - 4.0.5-3
- Combine libs with binaries and drop debug packages to avoid explosion of
number of packages.
- Adopt use of MPI guidelines.
* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.0.5-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
* Fri May 22 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.5-1
- Update to 4.0.5.
- Change spec %defines to %globals.
- Add debug subpackages to make debugging of GROMACS possible.
* Tue Feb 17 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.4-1
- Update to 4.0.4.
* Mon Jan 19 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.3-4
- Retry fixing gmxdemo.
* Mon Jan 19 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.3-3
- Fixed gmxdemo.
* Mon Jan 19 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.3-2
- Fix EPEL 4 build.
* Mon Jan 19 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.3-1
- Update to 4.0.3.
* Wed Jan 14 2009 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.2-7
- Update manual to latest version.
- Removed Requires: blas and lapack.
* Mon Nov 10 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.2-6
- Update to 4.0.2.
* Sun Nov 09 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.1-5
- Add Requires: blas too.
* Sun Nov 09 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0.1-4
- Update to 4.0.1.
- Add Requires: lapack and openmpi to prevent yum from pulling atlas and lam
instead.
* Wed Oct 15 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-3
- Rename also man pages.
* Mon Oct 13 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-2
- Added noreplace to bash completion file.
- Changed double precision mpi binary suffix to _mpi_d.
* Sun Oct 12 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-1
- Update to Gromacs 4.0.
- Remove module system and patch file names to begin with g_.
* Wed Oct 08 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.15.rc3
- Changed location of binaries.
- Removed conflict of module file, as the program is binary compatible with older versions.
* Wed Oct 08 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.14.rc3
- The gromacs module is loaded automatically and it conflicts with gromacs3.
* Tue Oct 07 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.13.rc3
- Renamed module files from %{name}-%{version} to %{name}.
* Mon Oct 06 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.12.rc3
- Fix BR to get GROMACS to build in mock for epel-4.
* Sat Oct 04 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.11.rc3
- Fix to get GROMACS to build in mock for epel-5.
* Sat Oct 04 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.10.rc3
- Implement module system & remove binary renaming.
- No need for autoreconf anymore.
- Update to rc3.
* Sat Oct 04 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.9.rc2
- Fall back to autoreconf due to binary renaming.
* Fri Oct 03 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.8.rc2
- Modified install commands to preserve timestamps.
* Fri Oct 03 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.7.rc2
- Even more review fixes.
- Binaries renamed:
highway -> g_highway
luck -> g_luck
sigeps -> g_sigeps
wheel -> g_wheel
* Thu Oct 02 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.6.rc2
- Final review fixes.
* Wed Oct 01 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.5.rc2
- Strip down requires by branching tutor to its own package.
* Tue Sep 30 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.4.rc2
- Extensive package review fixes.
- Unclear licenses on some files, filed upstream bug 217.
http://bugzilla.gromacs.org/show_bug.cgi?id=217
* Mon Sep 29 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.3.rc2
- Move .so files to -devel package.
- Remove .la files.
* Mon Sep 29 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.2.rc2
- Implement out-of-tree-builds.
- Add --noexecstack to CFLAGS.
- Remove execstack procedure and prelink from buildreqs.
- Filed upstream bug 215 to add .note.GNU-stack .
- Fix incorrect file permission on src/tools/gmx_xpm2ps.c .
* Mon Sep 29 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.1.rc2
- Alphabetized buildrequires.
- Changed gromacs-share to gromacs-common.
* Fri Sep 26 2008 Jussi Lehtola <jussi.lehtola@iki.fi> - 4.0-0.0.rc2
- Initial build.
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