Sun, 05 May 2024 07:03:17 UTC | login

Information for build R-ape-5.7.1-3.fc40

ID262788
Package NameR-ape
Version5.7.1
Release3.fc40
Epoch
Sourcegit+https://src.fedoraproject.org/rpms/R-ape.git#7f85e1d2829eb4354ec3065bc127fbfbc95136fb
SummaryAnalyses of Phylogenetics and Evolution
DescriptionFunctions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
Built bydavidlt
State complete
Volume DEFAULT
StartedWed, 13 Dec 2023 19:55:55 UTC
CompletedWed, 13 Dec 2023 21:03:55 UTC
Taskbuild (f40, /rpms/R-ape.git:7f85e1d2829eb4354ec3065bc127fbfbc95136fb)
Extra{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/R-ape.git#7f85e1d2829eb4354ec3065bc127fbfbc95136fb'}}
Tags
f40
RPMs
src
R-ape-5.7.1-3.fc40.src.rpm (info) (download)
riscv64
R-ape-5.7.1-3.fc40.riscv64.rpm (info) (download)
R-ape-debuginfo-5.7.1-3.fc40.riscv64.rpm (info) (download)
R-ape-debugsource-5.7.1-3.fc40.riscv64.rpm (info) (download)
Logs
riscv64
state.log
root.log
hw_info.log
build.log
mock_output.log
Changelog * Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 5.7.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild * Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 5.7.1-2 - R-maint-sig mass rebuild * Mon Mar 13 2023 Tom Callaway <spot@fedoraproject.org> - 5.7.1-1 - update to 5.7-1 * Sun Jan 22 2023 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.6.2-3 - Drop support for i686 - Switch to SPDX licenses * Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 5.6.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild * Fri Sep 02 2022 Tom Callaway <spot@fedoraproject.org> - 5.6.2-1 - update to 5.6-2 - rebuild for R 4.2.1 - bootstrap on * Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 5.5-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 5.5-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 5.5-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild