Tue, 21 May 2024 11:24:47 UTC | login

Information for build R-qtl-1.47.9-1.fc33

ID192817
Package NameR-qtl
Version1.47.9
Release1.fc33
Epoch
Sourcegit+https://src.fedoraproject.org/rpms/R-qtl.git#783f80a39565f961afbdfa655a937ad33c136090
SummaryTools for analyzing QTL experiments
DescriptionR-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
Built bydavidlt
State failed
Volume DEFAULT
StartedTue, 02 Mar 2021 15:06:48 UTC
CompletedTue, 02 Mar 2021 15:22:37 UTC
Taskbuild (f33, /rpms/R-qtl.git:783f80a39565f961afbdfa655a937ad33c136090)
Extra{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/R-qtl.git#783f80a39565f961afbdfa655a937ad33c136090'}}
Tags No tags
RPMs No RPMs
Changelog * Wed Jan 27 2021 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.47.9-1 - Update to 1.47-9 * Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.2-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Mon Aug 10 2020 Tom Callaway <spot@fedoraproject.org> - 1.46.2-5 - rebuild for FlexiBLAS R * Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.2-4 - Second attempt - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.2-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild * Fri Jun 05 2020 Tom Callaway <spot@fedoraproject.org> - 1.46.2-2 - rebuild for R 4 * Sat Mar 21 2020 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.46.2-1 - Update to 1.46-2 * Tue Feb 18 2020 Tom Callaway <spot@fedoraproject.org> - 1.44.9-7 - rebuild against R without libRlapack.so * Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.9-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild * Thu Sep 19 2019 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.44.9-5 - Unify specfile * Mon Aug 12 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 1.44.9-4 - Remove explicit dependencies provided by automatic dependency generator * Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.9-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.9-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild