R-ape-5.3-3.fc31 | Build Info

Information for build R-ape-5.3-3.fc31

124796

Package Name

R-ape

Version

5.3

Release

3.fc31

Epoch

Source

git+https://src.fedoraproject.org/rpms/R-ape.git#203b78b3121848f2915432a94227b0b1f6031cad

Summary

Analyses of Phylogenetics and Evolution

Description

Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.

Built by

davidlt

State

complete

Volume

DEFAULT

Started

Sat, 31 Aug 2019 18:56:22 UTC

Completed

Sun, 01 Sep 2019 00:55:19 UTC

Task

build (f31-candidate, /rpms/R-ape.git:203b78b3121848f2915432a94227b0b1f6031cad)

Extra

{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/R-ape.git#203b78b3121848f2915432a94227b0b1f6031cad'}}

Tags

RPMs

src
	R-ape-5.3-3.fc31.src.rpm (info) (download)
riscv64
	R-ape-5.3-3.fc31.riscv64.rpm (info) (download)
	R-ape-debuginfo-5.3-3.fc31.riscv64.rpm (info) (download)
	R-ape-debugsource-5.3-3.fc31.riscv64.rpm (info) (download)

Logs

riscv64
	build.log
	hw_info.log
	mock_output.log
	root.log
	state.log

Changelog

* Sun Aug 11 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.3-3 - Remove explicit dependencies provided by automatic dependency generator * Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 5.3-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Sun Mar 17 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.3-1 - Update to latest version * Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 5.2-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Tue Jan 22 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.2-1 - Update to latest version - Re-enable build checks - Re-arrange to match latest template * Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 5.1-1 - update to 5.1, rebuild for R 3.5.0 * Fri Mar 23 2018 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 5.0-1 - initial package for Fedora

Main Site Links:

Information for build R-ape-5.3-3.fc31