R-qtl-1.44.9-2.fc31 | Build Info

Information for build R-qtl-1.44.9-2.fc31

102539

Package Name

R-qtl

Version

1.44.9

Release

2.fc31

Epoch

Source

git+https://src.fedoraproject.org/rpms/R-qtl.git#d1ecaa2ec50940e505b56e065397823a2eaa918a

Summary

Tools for analyzing QTL experiments

Description

R-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.

Built by

davidlt

State

complete

Volume

DEFAULT

Started

Thu, 25 Jul 2019 09:00:54 UTC

Completed

Thu, 25 Jul 2019 12:46:39 UTC

Task

build (f31-candidate, /rpms/R-qtl.git:d1ecaa2ec50940e505b56e065397823a2eaa918a)

Extra

{'source': {'original_url': 'git+https://src.fedoraproject.org/rpms/R-qtl.git#d1ecaa2ec50940e505b56e065397823a2eaa918a'}}

Tags

f31

RPMs

src
	R-qtl-1.44.9-2.fc31.src.rpm (info) (download)
riscv64
	R-qtl-1.44.9-2.fc31.riscv64.rpm (info) (download)
	R-qtl-debuginfo-1.44.9-2.fc31.riscv64.rpm (info) (download)
	R-qtl-debugsource-1.44.9-2.fc31.riscv64.rpm (info) (download)

Logs

riscv64
	build.log
	hw_info.log
	mock_output.log
	root.log
	state.log

Changelog

* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.9-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Wed Jan 23 2019 Mattias Ellert <mattias.ellert@physics.uu.se> - 1.44.9-1 - Update to 1.44-9 * Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.42.8-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Fri May 18 2018 Tom Callaway <spot@fedoraproject.org> - 1.42.8-1.1 - actually rebuild against R 3.5.0 * Thu May 17 2018 Tom Callaway <spot@fedoraproject.org> - 1.42.8-1 - update to 1.42-8 * Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.41.6-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.41.6-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.41.6-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

Main Site Links:

Information for build R-qtl-1.44.9-2.fc31