371 lines
11 KiB
RPMSpec
371 lines
11 KiB
RPMSpec
# Copyright (c) 2016 Dave Love, Liverpool University
|
|
# Copyright (c) 2018 Dave Love, University of Manchester
|
|
# MIT licence, per Fedora policy.
|
|
|
|
# Following scalapack
|
|
%{!?openblas_arches:%global openblas_arches x86_64 %{ix86} armv7hl %{power64} aarch64}
|
|
%ifarch %{openblas_arches}
|
|
%bcond_without openblas
|
|
%else
|
|
%bcond_with openblas
|
|
%endif
|
|
|
|
%bcond_without check
|
|
|
|
%if 0%{?el6}%{?el7}
|
|
# For good enough C++
|
|
%global dts devtoolset-7-
|
|
%endif
|
|
|
|
Name: superlu_dist
|
|
Version: 6.3.1
|
|
Release: 1%{?dist}
|
|
Summary: Solution of large, sparse, nonsymmetric systems of linear equations
|
|
License: BSD
|
|
URL: http://crd-legacy.lbl.gov/~xiaoye/SuperLU/
|
|
Source0: http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_dist_%version.tar.gz
|
|
Source1: superlu_dist-make.inc
|
|
# Use CFLAGS in INSTALL/Makefile (was only failing on some targets)
|
|
Patch1: superlu_dist-inst.patch
|
|
BuildRequires: scotch-devel
|
|
BuildRequires: %{?dts}gcc-c++
|
|
%if %{with openblas}
|
|
BuildRequires: openblas-devel
|
|
# [else] Probably not worth a bundled provides for the bundled partial cblas.
|
|
%endif
|
|
# The test program runs if we link with -lmetis but crashes if linked with
|
|
# -lscotchmetis.
|
|
BuildRequires: metis-devel
|
|
|
|
%ifarch %power64
|
|
%if 0%{?el6}
|
|
%bcond_with mpich
|
|
%else
|
|
%bcond_without mpich
|
|
%endif
|
|
%else
|
|
%bcond_without mpich
|
|
%endif
|
|
|
|
%bcond_without openmpi
|
|
|
|
%if %{with openmpi}
|
|
%global openmpi openmpi
|
|
%else
|
|
%global openmpi %nil
|
|
%endif
|
|
%if %{with mpich}
|
|
%global mpich mpich
|
|
%else
|
|
%global mpich %nil
|
|
%endif
|
|
|
|
# For library soname. Start at one in case we need the incompatible
|
|
# v4 packaged separately.
|
|
%global major 1
|
|
%global minor 4
|
|
%global miner 0
|
|
%global sover %major.%minor.%miner
|
|
|
|
|
|
%global desc \
|
|
SuperLU is a general purpose library for the direct solution of large,\
|
|
sparse, nonsymmetric systems of linear equations. The library is\
|
|
written in C and is callable from either C or Fortran program. It\
|
|
uses MPI, OpenMP and CUDA to support various forms of parallelism. It\
|
|
supports both real and complex datatypes, both single and double\
|
|
precision, and 64-bit integer indexing. The library routines performs\
|
|
an LU decomposition with partial pivoting and triangular system solves\
|
|
through forward and back substitution. The LU factorization routines\
|
|
can handle non-square matrices but the triangular solves are performed\
|
|
only for square matrices. The matrix columns may be preordered\
|
|
(before factorization) either through library or user supplied\
|
|
routines. This preordering for sparsity is completely separate from\
|
|
the factorization. Working precision iterative refinement subroutines\
|
|
are provided for improved backward stability. Routines are also\
|
|
provided to equilibrate the system, estimate the condition number,\
|
|
calculate the relative backward error, and estimate error bounds for\
|
|
the refined solutions.\
|
|
\
|
|
This version uses MPI and OpenMP.
|
|
|
|
|
|
%description
|
|
%desc
|
|
|
|
%if %{with openmpi}
|
|
%package openmpi
|
|
Summary: Solution of large, sparse, nonsymmetric systems of linear equations - openmpi
|
|
Requires: openmpi%{?_isa}
|
|
|
|
%description openmpi
|
|
%desc
|
|
|
|
This is the openmpi version.
|
|
|
|
%package openmpi-devel
|
|
Summary: Development files for %name-openmpi
|
|
# ptscotch-openmpi-devel-parmetis is missing from RHEL8 for some reason
|
|
# https://bugzilla.redhat.com/show_bug.cgi?id=1750180
|
|
BuildRequires: openmpi-devel %{!?el8:ptscotch-openmpi-devel-parmetis}
|
|
BuildRequires: ptscotch-openmpi-devel
|
|
Requires: openmpi-devel%{?_isa}
|
|
Requires: %name-openmpi%{?_isa} = %version-%release
|
|
|
|
%description openmpi-devel
|
|
Development files for %name-openmpi
|
|
%endif
|
|
|
|
%package doc
|
|
Summary: Documentation for %name
|
|
BuildArch: noarch
|
|
|
|
%description doc
|
|
Documentation for %name
|
|
|
|
%if %{with mpich}
|
|
%package mpich
|
|
Summary: Solution of large, sparse, nonsymmetric systems of linear equations - mpich
|
|
BuildRequires: mpich-devel ptscotch-mpich-devel ptscotch-mpich-devel-parmetis
|
|
Requires: mpich%{?_isa}
|
|
|
|
%description mpich
|
|
%desc
|
|
|
|
This is the mpich version.
|
|
|
|
%package mpich-devel
|
|
Summary: Development files for %name-mpich
|
|
Requires: mpich-devel%{?_isa}
|
|
Requires: ptscotch-mpich-devel%{?_isa} ptscotch-mpich-devel-parmetis%{?_isa}
|
|
Requires: %name-mpich%{?_isa} = %version-%release
|
|
|
|
%description mpich-devel
|
|
Development files for %name-mpich
|
|
%endif
|
|
|
|
|
|
%prep
|
|
%setup -q -n SuperLU_DIST_%version
|
|
cp %SOURCE1 make.inc
|
|
%patch1 -p1 -b .orig
|
|
|
|
|
|
%build
|
|
%{?dts:source /opt/rh/devtoolset-7/enable}
|
|
export CFLAGS="%build_cflags" LDFLAGS="%build_ldflags" CXXFLAGS="%build_cxxflags"
|
|
# This order to leave openmpi version in place for %%check
|
|
for m in %mpich %openmpi; do
|
|
case $m in
|
|
openmpi) %_openmpi_load ;;
|
|
mpich) %_mpich_load ;;
|
|
esac
|
|
find -name \*.[oa] | xargs rm 2>/dev/null || true # no "clean" target
|
|
%if %{with openblas}
|
|
make SuperLUroot=$(pwd) INCLUDEDIR=$(pwd)/SRC V=1
|
|
%else
|
|
make blaslib HEADER=. BLASLIB='../libblas.a' INCLUDEDIR=%_includedir V=1
|
|
make SuperLUroot=$(pwd) BLASDEF= BLASLIB='../libblas.a' INCLUDEDIR=$(pwd)/SRC V=1
|
|
%endif
|
|
mkdir -p tmp $m
|
|
pushd tmp
|
|
ar x ../SRC/libsuperlu_dist.a
|
|
mpicxx -shared -Wl,-soname=libsuperlu_dist.so.%major \
|
|
-o ../$m/libsuperlu_dist.so.%sover *.o -fopenmp \
|
|
-lptscotchparmetis -lscotchmetis -lscotch -lptscotch \
|
|
-lptscotcherr -lptscotcherrexit \
|
|
%if %{with openblas}
|
|
-lopenblas \
|
|
%endif
|
|
%{?__global_ldflags}
|
|
popd
|
|
case $m in
|
|
openmpi)
|
|
cp -a EXAMPLE/pddrive .
|
|
%_openmpi_unload ;;
|
|
mpich)
|
|
make -C EXAMPLE clean
|
|
%_mpich_unload ;;
|
|
esac
|
|
done
|
|
|
|
|
|
%install
|
|
|
|
for m in %mpich %openmpi; do
|
|
case $m in
|
|
openmpi) %_openmpi_load ;;
|
|
mpich) %_mpich_load ;;
|
|
esac
|
|
mkdir -p %buildroot$MPI_LIB %buildroot$MPI_INCLUDE/superlu_dist
|
|
install -m644 SRC/*.h %buildroot$MPI_INCLUDE/superlu_dist
|
|
|
|
install -m 755 $m/libsuperlu_dist.so* %buildroot$MPI_LIB
|
|
pushd %buildroot$MPI_LIB
|
|
ln -s libsuperlu_dist.so.%sover libsuperlu_dist.so
|
|
ln -s libsuperlu_dist.so.%sover libsuperlu_dist.so.%major
|
|
ln -s libsuperlu_dist.so.%sover libsuperlu_dist.so.%major.%minor
|
|
popd
|
|
case $m in
|
|
openmpi) %_openmpi_unload ;;
|
|
mpich) %_mpich_unload ;;
|
|
esac
|
|
done
|
|
|
|
%check
|
|
# This is hanging inconsistently in koji, normally on i686 and arm. I
|
|
# can't debug it, so let's hope it doesn't deadlock in realistic
|
|
# situations.
|
|
%if %{with check}
|
|
%{?dts:source /opt/rh/devtoolset-7/enable}
|
|
pushd EXAMPLE
|
|
%if %{with openmpi}
|
|
# just check that it runs
|
|
%_openmpi_load
|
|
# Allow for more processes than cores
|
|
export OMPI_MCA_rmaps_base_oversubscribe=1
|
|
mpirun -n 4 ../pddrive -r 2 -c 2 g20.rua
|
|
%endif
|
|
%endif
|
|
make clean
|
|
|
|
%if %{with openmpi}
|
|
%files openmpi
|
|
%license License.txt
|
|
%_libdir/openmpi/lib/*.so.*
|
|
|
|
%files openmpi-devel
|
|
%_libdir/openmpi/lib/*.so
|
|
%_includedir/openmpi-%_arch/superlu_dist
|
|
%endif
|
|
|
|
%files doc
|
|
%license License.txt
|
|
%doc DOC/ug.pdf EXAMPLE
|
|
|
|
%if %{with mpich}
|
|
%files mpich
|
|
%license License.txt
|
|
%_libdir/mpich/lib/*.so.*
|
|
|
|
%files mpich-devel
|
|
%_libdir/mpich/lib/*.so
|
|
%_includedir/mpich-%_arch/superlu_dist
|
|
%endif
|
|
|
|
|
|
%changelog
|
|
* Thu Apr 9 2020 Dave Love <loveshack@fedoraproject.org> - 6.3.1-1
|
|
- New version
|
|
|
|
* Fri Jan 31 2020 Fedora Release Engineering <releng@fedoraproject.org> - 6.1.1-2
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
|
|
|
|
* Thu Sep 12 2019 Dave Love <loveshack@fedoraproject.org> - 6.1.1-1
|
|
- New version
|
|
|
|
* Sat Jul 27 2019 Fedora Release Engineering <releng@fedoraproject.org> - 6.1.0-3
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
|
|
|
|
* Thu Feb 14 2019 Orion Poplawski <orion@nwra.com> - 6.1.0-2
|
|
- Rebuild for openmpi 3.1.3
|
|
|
|
* Sun Feb 03 2019 Antonio Trande <sagitter@fedoraproject.org> - 6.1.0-1
|
|
- Release 6.1.0
|
|
|
|
* Sun Feb 03 2019 Fedora Release Engineering <releng@fedoraproject.org> - 6.0.0-4
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
|
|
|
|
* Sun Dec 16 2018 Orion Poplawski <orion@cora.nwra.com> - 6.0.0-3
|
|
- libsuperlu_dist is a C++ library, link with mpicxx
|
|
- Allow oversubscription with openmpi in tests
|
|
|
|
* Thu Nov 29 2018 Orion Poplawski <orion@cora.nwra.com> - 6.0.0-2
|
|
- Re-enable tests - seem to be working with openmpi 2.1.6rc1
|
|
|
|
* Wed Nov 21 2018 Dave Love <loveshack@fedoraproject.org> - 6.0.0-1
|
|
- New version
|
|
- Avoid tests
|
|
|
|
* Thu Jul 19 2018 Sandro Mani <manisandro@gmail.com> - 5.4.0-3
|
|
- Rebuild (scotch)
|
|
|
|
* Sat Jul 14 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.4.0-2
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
|
|
|
|
* Tue Jul 10 2018 Dave Love <loveshack@fedoraproject.org> - 5.4.0-1
|
|
- New version
|
|
|
|
* Thu Apr 26 2018 Dave Love <loveshack@fedoraproject.org> - 5.3.0-3
|
|
- Require ptscotch-mpich-devel-parmetis
|
|
|
|
* Fri Feb 09 2018 Fedora Release Engineering <releng@fedoraproject.org> - 5.3.0-2
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
|
|
|
|
* Tue Jan 30 2018 Dave Love <loveshack@fedoraproject.org> - 5.3.0-1
|
|
- New version
|
|
- Update sovar
|
|
- Drop patch
|
|
|
|
* Sun Nov 5 2017 Dave Love <loveshack@fedoraproject.org> - 5.2.2-2
|
|
- Link againt ptscothmetis et al
|
|
|
|
* Tue Oct 31 2017 Dave Love <loveshack@fedoraproject.org> - 5.2.2-1
|
|
- New version
|
|
- Drop output and cmake patches
|
|
- Update soname minor version (added function)
|
|
|
|
* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.3-8
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
|
|
|
|
* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 5.1.3-7
|
|
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
|
|
|
|
* Fri Jun 9 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-6
|
|
- Maybe use openblas_arches instead
|
|
|
|
* Thu Jun 8 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-5
|
|
- Fix up mpich-devel requirement for el7 7.3
|
|
- Avoid openblas on s3909(x)
|
|
|
|
* Sat Jun 3 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-4
|
|
- Fix mpich conditional
|
|
- Build for openmpi on s390 f25+
|
|
|
|
* Tue Apr 18 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-3
|
|
- Rebuild for fix to rhbz #1435690
|
|
|
|
* Wed Apr 12 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-2
|
|
- Fix EXAMPLES clean up
|
|
|
|
* Wed Apr 12 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-1
|
|
- Exclude check on power64 and fix the mpich conditional
|
|
|
|
* Wed Mar 8 2017 Dave Love <loveshack@fedoraproject.org> - 5.1.3-1
|
|
- New version
|
|
|
|
* Fri Nov 25 2016 Dave Love <loveshack@fedoraproject.org> - 5.1.2-3
|
|
- Use optflags, __global_ldflags
|
|
|
|
* Thu Nov 17 2016 Dave Love <loveshack@fedoraproject.org> - 5.1.2-2
|
|
- Patch to avoid large diagnostic output
|
|
|
|
* Thu Oct 27 2016 Dave Love <loveshack@fedoraproject.org> - 5.1.2-1
|
|
- New version
|
|
- Drop the OpenMP patch
|
|
|
|
* Sat Oct 22 2016 Dave Love <loveshack@fedoraproject.org> - 5.1.1-3
|
|
- Fix soname
|
|
|
|
* Wed Oct 19 2016 Dave Love <loveshack@fedoraproject.org> - 5.1.1-2
|
|
- Conditionalize openmpi
|
|
|
|
* Mon Oct 17 2016 Dave Love <loveshack@fedoraproject.org> - 5.1.1-1
|
|
- New version
|
|
- Drop some patches and use ptscotch to replace parmetis
|
|
- Add mpich version
|
|
- Make -doc package
|
|
|
|
* Fri Nov 20 2015 Dave Love <loveshack@fedoraproject.org> - 4.2-1
|
|
- Initial version
|