493 lines
17 KiB
RPMSpec
493 lines
17 KiB
RPMSpec
## Define if use openmpi or not
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%ifarch s390 s390x
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%global with_openmpi 0
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%else
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%global with_openmpi 1
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%endif
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Summary: Suite of nonlinear solvers
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Name: sundials
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Version: 2.6.1
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Release: 5%{?dist}
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# SUNDIALS is licensed under BSD with some additional (but unrestrictive) clauses.
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# Check the file 'LICENSE' for details.
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License: BSD
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Group: Development/Libraries
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URL: http://www.llnl.gov/casc/sundials/
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Source0: http://www.llnl.gov/casc/sundials/download/code/%{name}-%{version}.tar.gz
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##This package provides pkg-config files of Sundials
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Source1: %{name}-pkgconfig_files.tar.gz
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BuildRequires: gcc-gfortran
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BuildRequires: cmake
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BuildRequires: lapack-devel, blas-devel
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%description
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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SUNDIALS was implemented with the goal of providing robust time integrators
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and nonlinear solvers that can easily be incorporated into existing simulation
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codes. The primary design goals were to require minimal information from the
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user, allow users to easily supply their own data structures underneath the
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solvers, and allow for easy incorporation of user-supplied linear solvers and
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preconditioners.
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%package devel
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Summary: Suite of nonlinear solvers (developer files)
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Group: Development/Libraries
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Requires: %{name}%{?_isa} = %{version}-%{release}
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Provides: %{name}-static = %{version}-%{release}
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%description devel
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the developer files (.so file, header files)
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%if 0%{?with_openmpi}
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%package openmpi
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Summary: Suite of nonlinear solvers
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Group: Development/Libraries
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BuildRequires: openmpi-devel
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%description openmpi
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials Fortran parallel OpenMPI libraries.
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%package openmpi-devel
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Summary: Suite of nonlinear solvers (static libraries)
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Group: Development/Libraries
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Requires: %{name}-openmpi%{?_isa} = %{version}-%{release}
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%description openmpi-devel
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials parallel OpenMPI devel libraries and
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header files.
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%package fortran-openmpi
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Summary: Suite of nonlinear solvers
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Group: Development/Libraries
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Requires: gcc-gfortran%{?_isa}
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%description fortran-openmpi
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials Fortran parallel OpenMPI libraries.
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%package fortran-openmpi-devel
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Summary: Suite of nonlinear solvers
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Group: Development/Libraries
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Requires: %{name}-fortran-openmpi%{?_isa} = %{version}-%{release}
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%description fortran-openmpi-devel
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials Fortran parallel OpenMPI devel libraries and
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header files.
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%endif
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%package fortran
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Summary: Suite of nonlinear solvers (static libraries)
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Group: Development/Libraries
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Requires: gcc-gfortran%{?_isa}
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%description fortran
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials Fortran libraries.
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## Cannot build shared libraries for the FCMIX (Fortran) interfaces
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## due to unresolved symbol errors
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## coming from inexistent user-provided functions.
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## This package provides some static libraries
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%package fortran-devel
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Summary: Suite of nonlinear solvers
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Group: Development/Libraries
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Requires: %{name}-fortran%{?_isa} = %{version}-%{release}
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Provides: %{name}-fortran-static = %{version}-%{release}
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%description fortran-devel
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials Fortran devel libraries and
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header files.
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%package threads
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Summary: Suite of nonlinear solvers
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Group: Development/Libraries
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%description threads
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials libraries (included the Fortran ones)
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compiled with threading support.
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%package threads-devel
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Summary: Suite of nonlinear solvers
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Group: Development/Libraries
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Requires: %{name}-threads%{?_isa} = %{version}-%{release}
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%description threads-devel
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the Sundials devel library compiled with threading support
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and relative header files.
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%package doc
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Summary: Suite of nonlinear solvers (documentation)
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Group: Documentation
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BuildArch: noarch
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%description doc
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SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
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for use in writing mathematical software.
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This package contains the documentation files
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%prep
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%setup -q
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%setup -T -D -a 1
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##Define library dirs in the pkg-config files
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sed -i 's|@@libdir@@|%{_libdir}|g' sundials-pkgconfig_files/*.pc
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sed -i 's|@@fmoddir@@|%{_fmoddir}|g' sundials-pkgconfig_files/*.pc
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sed -i 's|@@includedir@@|%{_includedir}|g' sundials-pkgconfig_files/*.pc
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##Set destination library's paths
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sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/arkode/CMakeLists.txt
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sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/arkode/fcmix/CMakeLists.txt
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sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/cvode/CMakeLists.txt
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sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/cvode/fcmix/CMakeLists.txt
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sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/cvodes/CMakeLists.txt
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sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/ida/CMakeLists.txt
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sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/ida/fcmix/CMakeLists.txt
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sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/idas/CMakeLists.txt
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sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/kinsol/CMakeLists.txt
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sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/kinsol/fcmix/CMakeLists.txt
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##Set pthread library's paths
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sed -i \
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's|INSTALL(TARGETS sundials_nvecpthreads_shared DESTINATION lib)|INSTALL(TARGETS sundials_nvecpthreads_shared DESTINATION %{_libdir})|g' \
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src/nvec_pthreads/CMakeLists.txt
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sed -i \
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's|INSTALL(TARGETS sundials_fnvecpthreads_shared DESTINATION lib)|INSTALL(TARGETS sundials_fnvecpthreads_shared DESTINATION %{_fmoddir})|g' \
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src/nvec_pthreads/CMakeLists.txt
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##Set serial library's paths
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sed -i \
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's|TARGETS sundials_nvecserial_shared DESTINATION lib|TARGETS sundials_nvecserial_shared DESTINATION %{_libdir}|g' \
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src/nvec_ser/CMakeLists.txt
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sed -i 's|DESTINATION include/nvector|DESTINATION %{_includedir}/nvector|g' src/nvec_ser/CMakeLists.txt
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sed -i \
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's|TARGETS sundials_fnvecserial_shared DESTINATION lib|TARGETS sundials_fnvecserial_shared DESTINATION %{_fmoddir}|g' \
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src/nvec_ser/CMakeLists.txt
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##Set parallel library's paths
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sed -i \
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's|TARGETS sundials_nvecparallel_shared DESTINATION lib|TARGETS sundials_nvecparallel_shared DESTINATION %{_libdir}/openmpi/lib|g' \
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src/nvec_par/CMakeLists.txt
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sed -i 's|DESTINATION include/nvector|DESTINATION %{_includedir}/openmpi-%{_arch}/nvector|g' src/nvec_par/CMakeLists.txt
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sed -i \
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's|TARGETS sundials_fnvecparallel_shared DESTINATION lib|TARGETS sundials_fnvecparallel_shared DESTINATION %{_fmoddir}/openmpi-%{_arch}|g' \
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src/nvec_par/CMakeLists.txt
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## mpif77 test fails with GNU Fortran (GCC) 5.0.0 20150319 (64bit) Fedora 23
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%if 0%{?fedora} > 22
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sed -i 's|set(MPIF_PERFORM_TEST TRUE)|set(MPIF_PERFORM_TEST FALSE)|g' config/SundialsMPIF.cmake
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sed -i 's|set(MPIF_FOUND FALSE)|set(MPIF_FOUND TRUE)|g' config/SundialsMPIF.cmake
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%endif
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mv src/arkode/README src/README-arkode
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mv src/cvode/README src//README-cvode
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mv src/cvodes/README src/README-cvodes
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mv src/ida/README src/README-ida
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mv src/idas/README src/README.idas
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mv src/kinsol/README src/README-kinsol
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mv src/nvec_ser/README src/README-nvec_ser
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mv src/nvec_par/README src/README-nvec_par
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mv src/nvec_pthreads/README src/README-nvec_pthreads
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%build
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%if 0%{?with_openmpi}
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mkdir buildparallel_dir && pushd buildparallel_dir
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%{_openmpi_load}
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export LDFLAGS=" -Wl,--as-needed -lpthread"
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%cmake \
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-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
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-DCMAKE_BUILD_TYPE:STRING=Release \
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-DCMAKE_C_FLAGS_RELEASE:STRING="%{optflags}" \
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-DCMAKE_INSTALL_PREFIX=%{_prefix} \
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-DEXAMPLES_ENABLE=ON -DEXAMPLES_INSTALL=OFF \
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-DEXAMPLES_INSTALL_PATH:STRING=share/sundials \
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-DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF \
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-DMPI_ENABLE:BOLL=ON \
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-DMPI_MPICC:STRING=%{_libdir}/openmpi/bin/mpicc \
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-DMPI_RUN_COMMAND=mpirun \
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-DMPI_MPIF77:STRING=%{_libdir}/openmpi/bin/mpif77 \
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-DFCMIX_ENABLE:BOOL=ON \
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-DCMAKE_Fortran_COMPILER:STRING=%{_bindir}/gfortran \
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-DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags}" \
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-DPTHREAD_ENABLE:BOOL=OFF \
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-DLAPACK_ENABLE:BOOL=ON -DSUPERLUMT_ENABLE:BOOL=OFF \
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-DKLU_ENABLE:BOOL=OFF -Wno-dev ..
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make V=1 %{?_smp_mflags}
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%{_openmpi_unload}
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popd
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%endif
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mkdir buildserial_dir && pushd buildserial_dir
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export LDFLAGS=" -lm "
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%cmake \
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-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
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-DCMAKE_BUILD_TYPE:STRING=Release \
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-DCMAKE_C_FLAGS_RELEASE:STRING="%{optflags}" \
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-DCMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING=" -llapack -lblas -Wl,--as-needed -lpthread " \
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-DCMAKE_INSTALL_PREFIX=%{_prefix} \
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-DEXAMPLES_ENABLE=ON -DEXAMPLES_INSTALL=OFF \
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-DEXAMPLES_INSTALL_PATH:STRING=share/sundials \
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-DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF \
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-DMPI_ENABLE:BOLL=OFF \
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-DFCMIX_ENABLE:BOOL=ON \
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-DCMAKE_Fortran_COMPILER:STRING=%{_bindir}/gfortran \
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-DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags}" \
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-DPTHREAD_ENABLE:BOOL=ON \
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-DLAPACK_ENABLE:BOOL=ON -DSUPERLUMT_ENABLE:BOOL=OFF \
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-DKLU_ENABLE:BOOL=OFF -Wno-dev ..
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make V=1 %{?_smp_mflags}
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popd
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%install
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%if 0%{?with_openmpi}
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%{_openmpi_load}
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make install DESTDIR=%{buildroot} -C buildparallel_dir
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%{_openmpi_unload}
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%endif
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make install DESTDIR=%{buildroot} -C buildserial_dir
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mkdir -p %{buildroot}%{_libdir}/pkgconfig
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install -pm 644 sundials-pkgconfig_files/*.pc %{buildroot}%{_libdir}/pkgconfig
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%post -p /sbin/ldconfig
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%postun -p /sbin/ldconfig
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%post threads -p /sbin/ldconfig
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%postun threads -p /sbin/ldconfig
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%if 0%{?with_openmpi}
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%check
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##
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pushd buildparallel_dir/examples
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arkode/C_serial/ark_analytic
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%endif
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%files
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%license LICENSE
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%doc README src/README-*
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%{_libdir}/libsundials_nvecserial.so.*
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%{_libdir}/libsundials_cvode.so.*
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%{_libdir}/libsundials_cvodes.so.*
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%{_libdir}/libsundials_arkode.so.*
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%{_libdir}/libsundials_ida.so.*
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%{_libdir}/libsundials_idas.so.*
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%{_libdir}/libsundials_kinsol.so.*
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%exclude %{_datadir}/sundials/
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%files doc
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%license LICENSE
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%doc README
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%doc doc/cvode/cv_examples.pdf
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%doc doc/cvode/cv_guide.pdf
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%doc doc/kinsol/kin_examples.pdf
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%doc doc/kinsol/kin_guide.pdf
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%doc doc/cvodes/cvs_examples.pdf
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%doc doc/cvodes/cvs_guide.pdf
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%doc doc/ida/ida_examples.pdf
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%doc doc/ida/ida_guide.pdf
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%doc doc/arkode/*
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%files devel
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%{_libdir}/libsundials_nvecserial.so
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%{_libdir}/libsundials_cvode.so
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%{_libdir}/libsundials_cvodes.so
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%{_libdir}/libsundials_arkode.so
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%{_libdir}/libsundials_ida.so
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%{_libdir}/libsundials_idas.so
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%{_libdir}/libsundials_kinsol.so
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%{_includedir}/sundials/
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%{_includedir}/cvode/
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%{_includedir}/cvodes/
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%{_includedir}/arkode/
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%{_includedir}/ida/
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%{_includedir}/idas/
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%{_includedir}/kinsol/
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%{_includedir}/nvector/
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%{_libdir}/pkgconfig/arkode.pc
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%{_libdir}/pkgconfig/cvodes.pc
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%{_libdir}/pkgconfig/idas.pc
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%{_libdir}/pkgconfig/cvode.pc
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%{_libdir}/pkgconfig/ida.pc
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%{_libdir}/pkgconfig/kinsol.pc
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%{_libdir}/pkgconfig/nvec_serial.pc
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%if 0%{?with_openmpi}
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%files openmpi
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%license LICENSE
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%doc README src/README-nvec_par
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%{_libdir}/openmpi/lib/libsundials_nvecparallel.so.*
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%files openmpi-devel
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%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
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%{_libdir}/openmpi/lib/libsundials_nvecparallel.so
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%files fortran-openmpi
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%license LICENSE
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%doc README src/README-nvec_par
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%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so.*
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%files fortran-openmpi-devel
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%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
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%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so
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%endif
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%files fortran
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%license LICENSE
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%doc README
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%{_fmoddir}/libsundials_fnvecserial.so.*
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%files fortran-devel
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%{_includedir}/sundials/sundials_fnvector.h
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%{_fmoddir}/libsundials_fnvecserial.so
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%{_fmoddir}/libsundials_*.a
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%{_libdir}/pkgconfig/fcvode_serial.pc
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%{_libdir}/pkgconfig/fkinsol_serial.pc
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%{_libdir}/pkgconfig/fnvec_serial.pc
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%{_libdir}/pkgconfig/farkode_serial.pc
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%{_libdir}/pkgconfig/fida_serial.pc
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%files threads
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%license LICENSE
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%doc README src/README-nvec_pthreads
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%{_libdir}/libsundials_nvecpthreads.so.*
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%{_fmoddir}/libsundials_fnvecpthreads.so.*
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%files threads-devel
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%{_fmoddir}/libsundials_fnvecpthreads.so
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%{_libdir}/libsundials_nvecpthreads.so
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%{_includedir}/nvector/nvector_pthreads.h
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%{_libdir}/pkgconfig/nvec_pthreads.pc
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%{_libdir}/pkgconfig/fnvec_pthreads.pc
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%changelog
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* Thu Apr 16 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-5
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- Fixed ldconfig scriptlets
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* Sat Apr 04 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-4
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- Packaged static Fortran libraries
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* Fri Apr 03 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-3
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- Packaged pkg-config files of Serial libraries
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* Wed Apr 01 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-2
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- Built OpenMPI, libraries with threading support, Fortran libraries
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* Mon Mar 30 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.6.1-1
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- Update to version 2.6.1
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- Minor bugfixes
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* Sun Mar 29 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.6.0-2
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- Ensure the shared libraries are linked correctly
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* Sun Mar 22 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.6.0-1
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- Update to 2.6.0
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- Drop patches that are not needed anymore
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* Mon Aug 18 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.5.0-6
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
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* Sat Jun 07 2014 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.5.0-5
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- Fixed patches used in the previous build
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- Fixes bug #1105767
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* Wed May 21 2014 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.5.0-4
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- added patches to fix bugs #926583 and #1037342
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* Sun Aug 04 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.5.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
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* Mon Feb 18 2013 Dan Horák <dan[at]danny.cz> - 2.5.0-2
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- openmpi not available s390(x)
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* Sat Jan 26 2013 Rahul Sundaram <sundaram@fedoraproject.org> - 2.5.0-1
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- upstream release 2.5.0
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- enable parallel build
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- drop obsolete patch
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* Sat Jul 21 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-12
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
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* Sat Jan 14 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-11
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild
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* Wed Feb 09 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-10
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
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* Sun Jul 26 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-9
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
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* Wed Feb 25 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-8
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
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* Sun Sep 21 2008 Ville Skyttä <ville.skytta at iki.fi> - 2.3.0-7
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- Fix Patch0:/%%patch mismatch (#463065).
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* Tue Feb 19 2008 Fedora Release Engineering <rel-eng@fedoraproject.org> - 2.3.0-6
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- Autorebuild for GCC 4.3
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* Sat Aug 04 2007 John Pye <john@curioussymbols.com> 2.3.0-5
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- Final corrections from Debarshi Ray:
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- Changed all file-location macros to the curly-bracket format.
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- License field changed to BSD and comments added regarding special conditions.
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* Wed Aug 01 2007 John Pye <john@curioussymbols.com> 2.3.0-4
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- Corrections from Mamoru Tasaka:
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- Removed /sbin/ldconfig call for -devel package (not required).
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- Moved *.a libraries to a -static package.
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- Corrected sub/main package dependencies (added release num).
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- Corrected and added extra 'defattr' statements in files sections.
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* Tue Jul 31 2007 John Pye <john@curioussymbols.com> 2.3.0-3
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- Removed INSTALL_NOTES.
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- Added /sbin/ldconfig call for -devel package.
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- Remove automake dependency.
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- Changed --with-mpi-root location (currently commented out).
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- Added /sbin/ldconfig call for -devel package.
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* Mon Jul 30 2007 John Pye <john@curioussymbols.com> 2.3.0-2
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- Removed OpenMPI dependencies (providing serial-only package at the moment).
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- Fixing for Debarshi Ray's feedback:
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- changed post/postun to use -p style,
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- added comments for why 'makeinstall' is required,
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- using macro instead of direct call to ./configure,
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- replaced spaces with tabs,
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- re-tagged -doc package as group Documentation,
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- removed CC=... and CXX=... from %%configure command, and
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- changed download location.
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* Sun Jul 29 2007 John Pye <john@curioussymbols.com> 2.3.0-1
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- Converting to Fedora RPM by removing distro-specific stuff.
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* Wed Jun 27 2007 John Pye <john@curioussymbols.com> 2.3.0
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- Creating separate devel, doc and library packages.
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* Sun Jun 24 2007 John Pye <john@curioussymbols.com> 2.3.0
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- Fixed problem with creation of shared libraries (correction thanks to Andrey Romanenko in Debian).
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* Sat Jun 23 2007 John Pye <john@curioussymbols.com> 2.3.0
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- Ported to OpenSUSE Build Service, working on support for openSUSE alongside FC6, FC7.
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* Thu Jul 27 2006 John Pye <john.pye@student.unsw.edu.au> 2.3.0-0
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- First RPM spec created.
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