rpms
/
sundials
2
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

Fixes for EPEL7

This commit is contained in:
sagitter 2015-11-12 20:23:25 +01:00
parent 1d970ce412
commit 4b0b0a4aea
1 changed files with 28 additions and 67 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

95
sundials.spec
View File

@ -20,7 +20,7 @@
%endif
%endif
%if 0%{?fedora} > 21
%if ( 0%{?fedora} && 0%{?fedora} > 21 ) || ( 0%{?epel} && 0%{?epel} > 6 )
%global with_parcheck 1
%global with_sercheck 1
%endif
@ -28,7 +28,7 @@
Summary: Suite of nonlinear solvers
Name: sundials
Version: 2.6.2
Release: 10%{?dist}
Release: 11%{?dist}
# SUNDIALS is licensed under BSD with some additional (but unrestrictive) clauses.
# Check the file 'LICENSE' for details.
License: BSD
@ -90,8 +90,6 @@ for use in writing mathematical software.
This package contains the Sundials parallel OpenMPI devel libraries and
header files.
%if 0%{?fedora} <= 22
%ifarch %ix86
%package fortran-openmpi
Summary: Suite of nonlinear solvers
Group: Development/Libraries
@ -113,31 +111,6 @@ for use in writing mathematical software.
This package contains the Sundials Fortran parallel OpenMPI devel libraries and
header files.
%endif
%endif
%if 0%{?fedora} > 22
%package fortran-openmpi
Summary: Suite of nonlinear solvers
Group: Development/Libraries
Requires: gcc-gfortran%{?_isa}
%description fortran-openmpi
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.
This package contains the Sundials Fortran parallel OpenMPI libraries.
%package fortran-openmpi-devel
Summary: Suite of nonlinear solvers
Group: Development/Libraries
Requires: %{name}-fortran-openmpi%{?_isa} = %{version}-%{release}
%description fortran-openmpi-devel
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.
This package contains the Sundials Fortran parallel OpenMPI devel libraries and
header files.
%endif
%endif
%package fortran
Summary: Suite of nonlinear solvers (static libraries)
@ -263,12 +236,12 @@ mv src/nvec_pthreads/README src/README-nvec_pthreads
%if 0%{?with_openmpi}
mkdir buildparallel_dir && pushd buildparallel_dir
%{_openmpi_load}
export LDFLAGS="%{__global_ldflags} -Wl,-z,now -Wl,--as-needed -lpthread"
export LDFLAGS=" -Wl,--as-needed -lpthread"
%cmake \
-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
-DCMAKE_BUILD_TYPE:STRING=Release \
-DCMAKE_C_FLAGS_RELEASE:STRING="%{optflags} -Wl,-z,relro -Wl,-z,now" \
-DCMAKE_MODULE_LINKER_FLAGS:STRING="%{__global_ldflags} -Wl,-z,now" \
-DCMAKE_MODULE_LINKER_FLAGS:STRING=" " \
-DCMAKE_INSTALL_PREFIX=%{_prefix} \
-DEXAMPLES_ENABLE=ON -DEXAMPLES_INSTALL=OFF \
-DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF \
@ -276,10 +249,14 @@ export LDFLAGS="%{__global_ldflags} -Wl,-z,now -Wl,--as-needed -lpthread"
-DMPI_ENABLE:BOLL=ON \
-DMPI_MPICC:STRING=%{_libdir}/openmpi/bin/mpicc \
-DMPI_RUN_COMMAND=mpirun \
%if 0%{?fedora}
-DMPI_MPIF77:STRING=%{_libdir}/openmpi/bin/mpifort \
%else
-DMPI_MPIF77:STRING=%{_libdir}/openmpi/bin/mpif77 \
%endif
-DFCMIX_ENABLE:BOOL=ON \
-DCMAKE_Fortran_COMPILER:STRING=%{_bindir}/gfortran \
-DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags} %{__global_ldflags} -Wl,-z,now" \
-DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags} -Wl,-z,relro -Wl,-z,now" \
-DPTHREAD_ENABLE:BOOL=OFF \
-DLAPACK_ENABLE:BOOL=ON -DSUPERLUMT_ENABLE:BOOL=OFF \
-DKLU_ENABLE:BOOL=OFF -Wno-dev ..
@ -303,7 +280,7 @@ export LDFLAGS="%{__global_ldflags} -Wl,-z,now -lm"
-DMPI_ENABLE:BOLL=OFF \
-DFCMIX_ENABLE:BOOL=ON \
-DCMAKE_Fortran_COMPILER:STRING=%{_bindir}/gfortran \
-DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags} %{__global_ldflags} -Wl,-z,now" \
-DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags} -Wl,-z,relro -Wl,-z,now" \
-DPTHREAD_ENABLE:BOOL=ON \
-DLAPACK_ENABLE:BOOL=ON -DSUPERLUMT_ENABLE:BOOL=OFF \
-DKLU_ENABLE:BOOL=OFF -Wno-dev ..
@ -332,37 +309,29 @@ install -pm 644 sundials-pkgconfig_files/*.pc %{buildroot}%{_libdir}/pkgconfig
%if 0%{?with_openmpi}
%{_openmpi_load}
##arkode
mpirun -wdir buildparallel_dir/examples/arkode/C_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 ark_diurnal_kry_bbd_p
%if 0%{?fedora} > 22
mpirun -wdir buildparallel_dir/examples/arkode/F77_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir} -np 4 fark_diag_kry_bbd_p
%endif
mpirun -wdir buildparallel_dir/examples/arkode/C_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 ark_diurnal_kry_bbd_p
mpirun -wdir buildparallel_dir/examples/arkode/F77_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 fark_diag_kry_bbd_p
##cvode
%if 0%{?fedora} > 22
mpirun -wdir buildparallel_dir/examples/cvode/fcmix_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} fcvDiag_kry_bbd_p -np 4
%endif
mpirun -wdir buildparallel_dir/examples/cvode/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{buildroot}%{_libdir} -np 4 cvAdvDiff_diag_p
mpirun -wdir buildparallel_dir/examples/cvode/fcmix_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib fcvDiag_kry_bbd_p -np 4
mpirun -wdir buildparallel_dir/examples/cvode/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 cvAdvDiff_diag_p
##cvodes
mpirun -wdir buildparallel_dir/examples/cvodes/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 cvsAdvDiff_ASAp_non_p
mpirun -wdir buildparallel_dir/examples/cvodes/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 cvsAdvDiff_ASAp_non_p
##ida
%if 0%{?fedora} > 22
mpirun -wdir buildparallel_dir/examples/ida/fcmix_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 fidaHeat2D_kry_bbd_p
%endif
mpirun -wdir buildparallel_dir/examples/ida/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 idaFoodWeb_kry_bbd_p
mpirun -wdir buildparallel_dir/examples/ida/fcmix_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 fidaHeat2D_kry_bbd_p
mpirun -wdir buildparallel_dir/examples/ida/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 idaFoodWeb_kry_bbd_p
##idas
mpirun -wdir buildparallel_dir/examples/idas/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 idasBruss_ASAp_kry_bbd_p
mpirun -wdir buildparallel_dir/examples/idas/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 idasBruss_ASAp_kry_bbd_p
##kinsol
%if 0%{?fedora} > 22
mpirun -wdir buildparallel_dir/examples/kinsol/fcmix_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 fkinDiagon_kry_p
%endif
mpirun -wdir buildparallel_dir/examples/kinsol/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 kinFoodWeb_kry_bbd_p
mpirun -wdir buildparallel_dir/examples/kinsol/fcmix_parallel -x LD_LIBRARY_PATH=%{buildroot}%{_fmoddir}/openmpi-%{_arch}:%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 fkinDiagon_kry_p
mpirun -wdir buildparallel_dir/examples/kinsol/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 kinFoodWeb_kry_bbd_p
##nvector
mpirun -wdir buildparallel_dir/examples/nvector/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir} -np 4 test_nvector_mpi 5000 4 1
mpirun -wdir buildparallel_dir/examples/nvector/parallel -x LD_LIBRARY_PATH=%{buildroot}%{_libdir}/openmpi/lib:%{buildroot}%{_libdir}:%{_libdir}/openmpi/lib -np 4 test_nvector_mpi 5000 4 1
%{_openmpi_unload}
%endif ##if openmpi
%endif ## if with_parcheck
@ -545,8 +514,6 @@ popd
%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
%{_libdir}/openmpi/lib/libsundials_nvecparallel.so
%if 0%{?fedora} <= 22
%ifarch %ix86
%files fortran-openmpi
%license LICENSE
%doc README src/README-nvec_par
@ -556,18 +523,6 @@ popd
%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so
%endif
%endif
%if 0%{?fedora} > 22
%files fortran-openmpi
%license LICENSE
%doc README src/README-nvec_par
%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so.*
%files fortran-openmpi-devel
%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so
%endif
%endif
%files fortran
%license LICENSE
@ -598,8 +553,14 @@ popd
%{_libdir}/pkgconfig/fnvec_pthreads.pc
%changelog
* Thu Nov 12 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.2-11
- Fixes for EPEL7
- Set mpif77 only for OpenMPI < 1.17 (EPEL7)
- Set mpifort for OpenMPI > 1.17 (Fedora)
- Set LDFLAGS for EPEL7
* Wed Nov 11 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.2-10
- OpenMPI Fortran lib tests not compiled on F<23
- OpenMPI Fortran lib tests not compiled on F<23
* Wed Nov 11 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.2-9
- Hardened builds on <F23