sundials/sundials.spec

## Define if use openmpi or not
%ifarch s390 s390x
%global with_openmpi 0
%else
%global with_openmpi 1
%endif

Summary:    Suite of nonlinear solvers
Name:       sundials
Version:    2.6.1
Release:    5%{?dist}
# SUNDIALS is licensed under BSD with some additional (but unrestrictive) clauses.
# Check the file 'LICENSE' for details.
License:    BSD
Group:      Development/Libraries
URL:        http://www.llnl.gov/casc/sundials/
Source0:    http://www.llnl.gov/casc/sundials/download/code/%{name}-%{version}.tar.gz

##This package provides pkg-config files of Sundials
Source1:    %{name}-pkgconfig_files.tar.gz

BuildRequires: gcc-gfortran
BuildRequires: cmake
BuildRequires: lapack-devel, blas-devel

%description
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

SUNDIALS was implemented with the goal of providing robust time integrators
and nonlinear solvers that can easily be incorporated into existing simulation
codes. The primary design goals were to require minimal information from the
user, allow users to easily supply their own data structures underneath the
solvers, and allow for easy incorporation of user-supplied linear solvers and
preconditioners. 

%package devel
Summary:    Suite of nonlinear solvers (developer files)
Group:      Development/Libraries
Requires:   %{name}%{?_isa} = %{version}-%{release}
Provides:   %{name}-static = %{version}-%{release}
%description devel
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the developer files (.so file, header files)

%if 0%{?with_openmpi}
%package openmpi
Summary:    Suite of nonlinear solvers
Group:      Development/Libraries
BuildRequires: openmpi-devel
%description openmpi
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials Fortran parallel OpenMPI libraries.

%package openmpi-devel
Summary:    Suite of nonlinear solvers (static libraries)
Group:      Development/Libraries
Requires:   %{name}-openmpi%{?_isa} = %{version}-%{release}
%description openmpi-devel
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials parallel OpenMPI devel libraries and
header files.

%package fortran-openmpi
Summary:    Suite of nonlinear solvers
Group:      Development/Libraries
Requires:   gcc-gfortran%{?_isa}
%description fortran-openmpi
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials Fortran parallel OpenMPI libraries.

%package fortran-openmpi-devel
Summary:    Suite of nonlinear solvers
Group:      Development/Libraries
Requires:   %{name}-fortran-openmpi%{?_isa} = %{version}-%{release}
%description fortran-openmpi-devel
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials Fortran parallel OpenMPI devel libraries and
header files.
%endif

%package fortran
Summary:    Suite of nonlinear solvers (static libraries)
Group:      Development/Libraries
Requires:   gcc-gfortran%{?_isa}
%description fortran
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials Fortran libraries.

## Cannot build shared libraries for the FCMIX (Fortran) interfaces 
## due to unresolved symbol errors 
## coming from inexistent user-provided functions.
## This package provides some static libraries
%package fortran-devel
Summary:    Suite of nonlinear solvers
Group:      Development/Libraries
Requires:   %{name}-fortran%{?_isa} = %{version}-%{release}
Provides:   %{name}-fortran-static = %{version}-%{release}
%description fortran-devel
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials Fortran devel libraries and
header files.

%package threads
Summary:    Suite of nonlinear solvers
Group:      Development/Libraries
%description threads
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials libraries (included the Fortran ones)
compiled with threading support.

%package threads-devel
Summary:    Suite of nonlinear solvers
Group:      Development/Libraries
Requires:   %{name}-threads%{?_isa} = %{version}-%{release}
%description threads-devel
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the Sundials devel library compiled with threading support
and relative header files.

%package doc
Summary:    Suite of nonlinear solvers (documentation)
Group:      Documentation
BuildArch: noarch
%description doc
SUNDIALS is a SUite of Non-linear DIfferential/ALgebraic equation Solvers
for use in writing mathematical software.

This package contains the documentation files

%prep
%setup -q 
%setup -T -D -a 1

##Define library dirs in the pkg-config files
sed -i 's|@@libdir@@|%{_libdir}|g' sundials-pkgconfig_files/*.pc
sed -i 's|@@fmoddir@@|%{_fmoddir}|g' sundials-pkgconfig_files/*.pc
sed -i 's|@@includedir@@|%{_includedir}|g' sundials-pkgconfig_files/*.pc

##Set destination library's paths
sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/arkode/CMakeLists.txt
sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/arkode/fcmix/CMakeLists.txt
sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/cvode/CMakeLists.txt
sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/cvode/fcmix/CMakeLists.txt
sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/cvodes/CMakeLists.txt
sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/ida/CMakeLists.txt
sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/ida/fcmix/CMakeLists.txt
sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/idas/CMakeLists.txt
sed -i 's/DESTINATION lib/DESTINATION %{_lib}/g' src/kinsol/CMakeLists.txt
sed -i 's|DESTINATION lib|DESTINATION %{_fmoddir}|g' src/kinsol/fcmix/CMakeLists.txt

##Set pthread library's paths
sed -i \
 's|INSTALL(TARGETS sundials_nvecpthreads_shared DESTINATION lib)|INSTALL(TARGETS sundials_nvecpthreads_shared DESTINATION %{_libdir})|g' \
  src/nvec_pthreads/CMakeLists.txt
sed -i \
 's|INSTALL(TARGETS sundials_fnvecpthreads_shared DESTINATION lib)|INSTALL(TARGETS sundials_fnvecpthreads_shared DESTINATION %{_fmoddir})|g' \
  src/nvec_pthreads/CMakeLists.txt

##Set serial library's paths
sed -i \
 's|TARGETS sundials_nvecserial_shared DESTINATION lib|TARGETS sundials_nvecserial_shared DESTINATION %{_libdir}|g' \
  src/nvec_ser/CMakeLists.txt
sed -i 's|DESTINATION include/nvector|DESTINATION %{_includedir}/nvector|g' src/nvec_ser/CMakeLists.txt
sed -i \
 's|TARGETS sundials_fnvecserial_shared DESTINATION lib|TARGETS sundials_fnvecserial_shared DESTINATION %{_fmoddir}|g' \
  src/nvec_ser/CMakeLists.txt

##Set parallel library's paths
sed -i \
 's|TARGETS sundials_nvecparallel_shared DESTINATION lib|TARGETS sundials_nvecparallel_shared DESTINATION %{_libdir}/openmpi/lib|g' \
  src/nvec_par/CMakeLists.txt
sed -i 's|DESTINATION include/nvector|DESTINATION %{_includedir}/openmpi-%{_arch}/nvector|g' src/nvec_par/CMakeLists.txt
sed -i \
 's|TARGETS sundials_fnvecparallel_shared DESTINATION lib|TARGETS sundials_fnvecparallel_shared DESTINATION %{_fmoddir}/openmpi-%{_arch}|g' \
  src/nvec_par/CMakeLists.txt

## mpif77 test fails with GNU Fortran (GCC) 5.0.0 20150319 (64bit) Fedora 23
%if 0%{?fedora} > 22
sed -i 's|set(MPIF_PERFORM_TEST TRUE)|set(MPIF_PERFORM_TEST FALSE)|g' config/SundialsMPIF.cmake
sed -i 's|set(MPIF_FOUND FALSE)|set(MPIF_FOUND TRUE)|g' config/SundialsMPIF.cmake
%endif

mv src/arkode/README src/README-arkode
mv src/cvode/README src//README-cvode
mv src/cvodes/README src/README-cvodes
mv src/ida/README src/README-ida
mv src/idas/README src/README.idas
mv src/kinsol/README src/README-kinsol
mv src/nvec_ser/README src/README-nvec_ser
mv src/nvec_par/README src/README-nvec_par
mv src/nvec_pthreads/README src/README-nvec_pthreads

%build
%if 0%{?with_openmpi}
mkdir buildparallel_dir && pushd buildparallel_dir
%{_openmpi_load}
export LDFLAGS=" -Wl,--as-needed -lpthread"
%cmake \
 -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
 -DCMAKE_BUILD_TYPE:STRING=Release \
 -DCMAKE_C_FLAGS_RELEASE:STRING="%{optflags}" \
 -DCMAKE_INSTALL_PREFIX=%{_prefix} \
 -DEXAMPLES_ENABLE=ON -DEXAMPLES_INSTALL=OFF \
 -DEXAMPLES_INSTALL_PATH:STRING=share/sundials \
 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF \
 -DMPI_ENABLE:BOLL=ON \
 -DMPI_MPICC:STRING=%{_libdir}/openmpi/bin/mpicc \
 -DMPI_RUN_COMMAND=mpirun \
 -DMPI_MPIF77:STRING=%{_libdir}/openmpi/bin/mpif77 \
 -DFCMIX_ENABLE:BOOL=ON \
 -DCMAKE_Fortran_COMPILER:STRING=%{_bindir}/gfortran \
 -DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags}" \
 -DPTHREAD_ENABLE:BOOL=OFF \
 -DLAPACK_ENABLE:BOOL=ON -DSUPERLUMT_ENABLE:BOOL=OFF \
 -DKLU_ENABLE:BOOL=OFF -Wno-dev ..
make V=1 %{?_smp_mflags}
%{_openmpi_unload}
popd
%endif

mkdir buildserial_dir && pushd buildserial_dir
export LDFLAGS=" -lm "
%cmake \
 -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
 -DCMAKE_BUILD_TYPE:STRING=Release \
 -DCMAKE_C_FLAGS_RELEASE:STRING="%{optflags}" \
 -DCMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING=" -llapack -lblas -Wl,--as-needed -lpthread " \
 -DCMAKE_INSTALL_PREFIX=%{_prefix} \
 -DEXAMPLES_ENABLE=ON -DEXAMPLES_INSTALL=OFF \
 -DEXAMPLES_INSTALL_PATH:STRING=share/sundials \
 -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STATIC_LIBS:BOOL=OFF \
 -DMPI_ENABLE:BOLL=OFF \
 -DFCMIX_ENABLE:BOOL=ON \
 -DCMAKE_Fortran_COMPILER:STRING=%{_bindir}/gfortran \
 -DCMAKE_Fortran_FLAGS_RELEASE:STRING="%{optflags}" \
 -DPTHREAD_ENABLE:BOOL=ON \
 -DLAPACK_ENABLE:BOOL=ON -DSUPERLUMT_ENABLE:BOOL=OFF \
 -DKLU_ENABLE:BOOL=OFF -Wno-dev ..
make V=1 %{?_smp_mflags}
popd

%install
%if 0%{?with_openmpi}
%{_openmpi_load}
make install DESTDIR=%{buildroot} -C buildparallel_dir
%{_openmpi_unload}
%endif
make install DESTDIR=%{buildroot} -C buildserial_dir

mkdir -p %{buildroot}%{_libdir}/pkgconfig
install -pm 644 sundials-pkgconfig_files/*.pc %{buildroot}%{_libdir}/pkgconfig

%post -p /sbin/ldconfig
%postun -p /sbin/ldconfig

%post threads -p /sbin/ldconfig
%postun threads -p /sbin/ldconfig

%if 0%{?with_openmpi}
%check
##
pushd buildparallel_dir/examples
arkode/C_serial/ark_analytic
%endif

%files
%license LICENSE
%doc README src/README-*
%{_libdir}/libsundials_nvecserial.so.*
%{_libdir}/libsundials_cvode.so.*
%{_libdir}/libsundials_cvodes.so.*
%{_libdir}/libsundials_arkode.so.* 
%{_libdir}/libsundials_ida.so.* 
%{_libdir}/libsundials_idas.so.* 
%{_libdir}/libsundials_kinsol.so.*
%exclude %{_datadir}/sundials/

%files doc
%license LICENSE
%doc README
%doc doc/cvode/cv_examples.pdf
%doc doc/cvode/cv_guide.pdf
%doc doc/kinsol/kin_examples.pdf
%doc doc/kinsol/kin_guide.pdf
%doc doc/cvodes/cvs_examples.pdf
%doc doc/cvodes/cvs_guide.pdf
%doc doc/ida/ida_examples.pdf
%doc doc/ida/ida_guide.pdf
%doc doc/arkode/*

%files devel
%{_libdir}/libsundials_nvecserial.so
%{_libdir}/libsundials_cvode.so
%{_libdir}/libsundials_cvodes.so
%{_libdir}/libsundials_arkode.so 
%{_libdir}/libsundials_ida.so 
%{_libdir}/libsundials_idas.so 
%{_libdir}/libsundials_kinsol.so
%{_includedir}/sundials/
%{_includedir}/cvode/
%{_includedir}/cvodes/
%{_includedir}/arkode/
%{_includedir}/ida/
%{_includedir}/idas/
%{_includedir}/kinsol/
%{_includedir}/nvector/
%{_libdir}/pkgconfig/arkode.pc
%{_libdir}/pkgconfig/cvodes.pc
%{_libdir}/pkgconfig/idas.pc
%{_libdir}/pkgconfig/cvode.pc
%{_libdir}/pkgconfig/ida.pc
%{_libdir}/pkgconfig/kinsol.pc
%{_libdir}/pkgconfig/nvec_serial.pc

%if 0%{?with_openmpi}
%files openmpi
%license LICENSE
%doc README src/README-nvec_par
%{_libdir}/openmpi/lib/libsundials_nvecparallel.so.*

%files openmpi-devel
%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
%{_libdir}/openmpi/lib/libsundials_nvecparallel.so

%files fortran-openmpi
%license LICENSE
%doc README src/README-nvec_par
%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so.*

%files fortran-openmpi-devel
%{_includedir}/openmpi-%{_arch}/nvector/nvector_parallel.h
%{_fmoddir}/openmpi-%{_arch}/libsundials_fnvecparallel.so
%endif

%files fortran
%license LICENSE
%doc README
%{_fmoddir}/libsundials_fnvecserial.so.*

%files fortran-devel
%{_includedir}/sundials/sundials_fnvector.h
%{_fmoddir}/libsundials_fnvecserial.so
%{_fmoddir}/libsundials_*.a
%{_libdir}/pkgconfig/fcvode_serial.pc
%{_libdir}/pkgconfig/fkinsol_serial.pc
%{_libdir}/pkgconfig/fnvec_serial.pc
%{_libdir}/pkgconfig/farkode_serial.pc
%{_libdir}/pkgconfig/fida_serial.pc

%files threads
%license LICENSE
%doc README src/README-nvec_pthreads
%{_libdir}/libsundials_nvecpthreads.so.*
%{_fmoddir}/libsundials_fnvecpthreads.so.*

%files threads-devel
%{_fmoddir}/libsundials_fnvecpthreads.so
%{_libdir}/libsundials_nvecpthreads.so
%{_includedir}/nvector/nvector_pthreads.h
%{_libdir}/pkgconfig/nvec_pthreads.pc
%{_libdir}/pkgconfig/fnvec_pthreads.pc

%changelog
* Thu Apr 16 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-5
- Fixed ldconfig scriptlets

* Sat Apr 04 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-4
- Packaged static Fortran libraries

* Fri Apr 03 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-3
- Packaged pkg-config files of Serial libraries

* Wed Apr 01 2015 Antonio Trande <sagitterATfedoraproject.org> - 2.6.1-2
- Built OpenMPI, libraries with threading support, Fortran libraries

* Mon Mar 30 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.6.1-1
- Update to version 2.6.1 
- Minor bugfixes

* Sun Mar 29 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.6.0-2
- Ensure the shared libraries are linked correctly

* Sun Mar 22 2015 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.6.0-1
- Update to 2.6.0
- Drop patches that are not needed anymore

* Mon Aug 18 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.5.0-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

* Sat Jun 07 2014 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.5.0-5
- Fixed patches used in the previous build
- Fixes bug #1105767

* Wed May 21 2014 Mukundan Ragavan <nonamedotc@fedoraproject.org> - 2.5.0-4
- added patches to fix bugs #926583 and #1037342

* Sun Aug 04 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.5.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild

* Mon Feb 18 2013 Dan Horák <dan[at]danny.cz> - 2.5.0-2
- openmpi not available s390(x)

* Sat Jan 26 2013 Rahul Sundaram <sundaram@fedoraproject.org> - 2.5.0-1
- upstream release 2.5.0
- enable parallel build
- drop obsolete patch

* Sat Jul 21 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-12
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild

* Sat Jan 14 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild

* Wed Feb 09 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-10
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild

* Sun Jul 26 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild

* Wed Feb 25 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild

* Sun Sep 21 2008 Ville Skyttä <ville.skytta at iki.fi> - 2.3.0-7
- Fix Patch0:/%%patch mismatch (#463065).

* Tue Feb 19 2008 Fedora Release Engineering <rel-eng@fedoraproject.org> - 2.3.0-6
- Autorebuild for GCC 4.3

* Sat Aug 04 2007 John Pye <john@curioussymbols.com> 2.3.0-5
- Final corrections from Debarshi Ray:
- Changed all file-location macros to the curly-bracket format.
- License field changed to BSD and comments added regarding special conditions.

* Wed Aug 01 2007 John Pye <john@curioussymbols.com> 2.3.0-4
- Corrections from Mamoru Tasaka:
- Removed /sbin/ldconfig call for -devel package (not required).
- Moved *.a libraries to a -static package.
- Corrected sub/main package dependencies (added release num).
- Corrected and added extra 'defattr' statements in files sections.

* Tue Jul 31 2007 John Pye <john@curioussymbols.com> 2.3.0-3
- Removed INSTALL_NOTES.
- Added /sbin/ldconfig call for -devel package.
- Remove automake dependency.
- Changed --with-mpi-root location (currently commented out).
- Added /sbin/ldconfig call for -devel package.

* Mon Jul 30 2007 John Pye <john@curioussymbols.com> 2.3.0-2
- Removed OpenMPI dependencies (providing serial-only package at the moment).
- Fixing for Debarshi Ray's feedback:
- changed post/postun to use -p style,
- added comments for why 'makeinstall' is required,
- using macro instead of direct call to ./configure,
- replaced spaces with tabs,
- re-tagged -doc package as group Documentation,
- removed CC=... and CXX=... from %%configure command, and
- changed download location.

* Sun Jul 29 2007 John Pye <john@curioussymbols.com> 2.3.0-1
- Converting to Fedora RPM by removing distro-specific stuff.

* Wed Jun 27 2007 John Pye <john@curioussymbols.com> 2.3.0
- Creating separate devel, doc and library packages.

* Sun Jun 24 2007 John Pye <john@curioussymbols.com> 2.3.0
- Fixed problem with creation of shared libraries (correction thanks to Andrey Romanenko in Debian).

* Sat Jun 23 2007 John Pye <john@curioussymbols.com> 2.3.0
- Ported to OpenSUSE Build Service, working on support for openSUSE alongside FC6, FC7.

* Thu Jul 27 2006 John Pye <john.pye@student.unsw.edu.au> 2.3.0-0
- First RPM spec created.