Apply compatibility patch with numpy 1.20
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serge-sans-paille
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@ -0,0 +1,118 @@
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From d70e59afd88263adafdc9f82578c152ea1987f24 Mon Sep 17 00:00:00 2001
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From: serge-sans-paille <serge.guelton@telecom-bretagne.eu>
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Date: Tue, 5 Jan 2021 22:42:03 +0100
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Subject: [PATCH] Update to match numpy 1.20 changes
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---
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pythran/tests/cases/goodExpoMeasure.py | 6 +++---
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pythran/tests/test_cases.py | 6 ++++++
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pythran/tests/test_ndarray.py | 7 +++++--
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pythran/tests/test_numpy_func2.py | 2 +-
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pythran/tests/test_typing.py | 2 +-
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5 files changed, 16 insertions(+), 7 deletions(-)
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diff --git a/pythran/tests/cases/goodExpoMeasure.py b/pythran/tests/cases/goodExpoMeasure.py
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index 4c8f702..fc0d57b 100644
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--- a/pythran/tests/cases/goodExpoMeasure.py
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+++ b/pythran/tests/cases/goodExpoMeasure.py
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@@ -5,9 +5,9 @@ def goodExpoMeasure(inRGB, sigma):
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'''
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Compute the good exposition image quality measure on 1 input image.
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'''
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- R = inRGB[0,:,:].astype(numpy.float)
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- G = inRGB[1,:,:].astype(numpy.float)
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- B = inRGB[2,:,:].astype(numpy.float)
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+ R = inRGB[0,:,:].astype(numpy.float64)
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+ G = inRGB[1,:,:].astype(numpy.float64)
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+ B = inRGB[2,:,:].astype(numpy.float64)
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goodExpoR = numpy.exp(- ((R - 128)**2) / sigma)
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goodExpoG = numpy.exp(- ((G - 128)**2) / sigma)
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goodExpoB = numpy.exp(- ((B - 128)**2) / sigma)
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diff --git a/pythran/tests/test_cases.py b/pythran/tests/test_cases.py
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index 6a48ea4..15762ff 100644
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--- a/pythran/tests/test_cases.py
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+++ b/pythran/tests/test_cases.py
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@@ -2,6 +2,8 @@
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# TODO: check http://code.google.com/p/unladen-swallow/wiki/Benchmarks
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import os
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+from distutils.version import LooseVersion
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+import numpy
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import unittest
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from pythran.tests import TestFromDir
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@@ -16,6 +18,9 @@ class TestCases(TestFromDir):
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TestCases.populate(TestCases)
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+if LooseVersion(numpy.__version__) >= '1.20':
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+ del TestCases.test_train_equalizer_norun0
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+
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if __name__ == '__main__':
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unittest.main()
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diff --git a/pythran/tests/test_ndarray.py b/pythran/tests/test_ndarray.py
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index a1dd634..b28cef5 100644
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--- a/pythran/tests/test_ndarray.py
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+++ b/pythran/tests/test_ndarray.py
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@@ -2,6 +2,7 @@ from pythran.tests import TestEnv
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from pythran.typing import NDArray, Tuple, List
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import numpy
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+from distutils.version import LooseVersion
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import unittest
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@@ -271,12 +272,12 @@ class TestNdarray(TestEnv):
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self.run_test("""
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def numpy_np_float(n):
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import numpy
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- return numpy.ones(n, numpy.float)""",
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+ return numpy.ones(n, float)""",
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5,
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numpy_np_float=[int])
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def test_numpy_complex(self):
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- self.run_test("def numpy_complex(n): import numpy ; return numpy.ones(n, numpy.complex)",
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+ self.run_test("def numpy_complex(n): import numpy ; return numpy.ones(n, complex)",
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5,
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numpy_complex=[int])
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@@ -1092,6 +1093,8 @@ def complex_conversion0(x):
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5.,
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built_slice_indexing=[NDArray[float, :], int, int, float])
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+ @unittest.skipIf(LooseVersion(numpy.__version__) >= '1.20',
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+ "numpy.dtype.type changed in 1.20.0")
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def test_dtype_type(self):
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self.run_test('''
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def dtype_type(x):
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diff --git a/pythran/tests/test_numpy_func2.py b/pythran/tests/test_numpy_func2.py
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index 0b3c441..53e105e 100644
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--- a/pythran/tests/test_numpy_func2.py
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+++ b/pythran/tests/test_numpy_func2.py
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@@ -753,7 +753,7 @@ def test_copy0(x):
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self.run_test("def np_empty_kwargs(a):\n from numpy import empty\n a = empty(a, dtype=int)\n return a.strides, len(a)", (3, 2), np_empty_kwargs=[Tuple[int, int]])
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def test_empty_kwargs2(self):
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- self.run_test("def np_empty_kwargs2(a):\n from numpy import empty, float\n a = empty(a, dtype=float)\n return a.strides, a.shape", 3, np_empty_kwargs2=[int])
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+ self.run_test("def np_empty_kwargs2(a):\n from numpy import empty \n a = empty(a, dtype=float)\n return a.strides, a.shape", 3, np_empty_kwargs2=[int])
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def test_arange(self):
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self.run_test("def np_arange_(a):\n from numpy import arange\n return arange(a, dtype=float)", 10, np_arange_=[int])
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diff --git a/pythran/tests/test_typing.py b/pythran/tests/test_typing.py
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index d10d7e6..a7a2934 100644
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--- a/pythran/tests/test_typing.py
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+++ b/pythran/tests/test_typing.py
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@@ -356,7 +356,7 @@ def recursive_interprocedural_typing2(c):
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print_type(numpy.ones(n, dtype=numpy.uint16).dtype)
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print_type(numpy.ones(n, dtype=numpy.uint64).dtype)
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print_type(numpy.ones(n, dtype=numpy.double).dtype)
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- print_type(numpy.ones(n, dtype=numpy.complex).dtype)
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+ print_type(numpy.ones(n, dtype=complex).dtype)
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''',
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3,
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print_numpy_types=[int])
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--
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1.8.3.1
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@ -1,7 +1,7 @@
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Name: pythran
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Version: 0.9.8^post3
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%global uver 0.9.8post3
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Release: 1%{?dist}
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Release: 2%{?dist}
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Summary: Ahead of Time Python compiler for numeric kernels
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# pythran is BSD
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@ -20,6 +20,9 @@ Source0: %{url}/archive/%{uver}/%{name}-%{uver}.tar.gz
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# Make RNG adaptor compatible with libstdc++
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Patch1: %{url}/commit/4d317755a3b908cc.patch
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# Compatibility with numpy 1.20, see https://github.com/serge-sans-paille/pythran/pull/1702
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Patch2: 1702.patch
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# there is no actual arched content
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# yet we want to test on all architectures
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# and we also might need to skip some
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@ -39,6 +42,7 @@ BuildRequires: python3-pytest
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BuildRequires: python3-pytest-xdist
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BuildRequires: /usr/bin/python
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BuildRequires: /usr/bin/ipython
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BuildRequires: python3-scipy
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# This is a package that compiles code, it runtime requires devel packages
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Requires: flexiblas-devel
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@ -108,6 +112,9 @@ rm -rf docs/_build/html/.{doctrees,buildinfo}
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%changelog
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* Mon Jan 18 2021 Serge Guelton - 0.9.8^post3-2
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- Apply compatibility patch with numpy 1.20
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* Sun Dec 13 2020 sguelton@redhat.com - 0.9.8^post3-1
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- Update to 0.9.8post3
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- No longer recommend SciPy
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