Disabling package-notes

Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>

.gitignore

@@ -14,3 +14,35 @@
 /petsc-3.11.1.tar.gz
 /petsc-3.11.2.tar.gz
 /petsc-3.11.3.tar.gz
+/petsc-3.12.0.tar.gz
+/petsc-3.12.1.tar.gz
+/petsc-3.12.2.tar.gz
+/petsc-3.12.3.tar.gz
+/petsc-3.12.4.tar.gz
+/petsc-3.13.0.tar.gz
+/petsc-3.13.1.tar.gz
+/petsc-3.13.2.tar.gz
+/petsc-3.13.3.tar.gz
+/petsc-3.13.4.tar.gz
+/petsc-3.13.5.tar.gz
+/petsc-3.14.1.tar.gz
+/petsc-3.14.2.tar.gz
+/petsc-3.14.4.tar.gz
+/petsc-3.14.5.tar.gz
+/petsc-3.14.6.tar.gz
+/petsc-with-docs-3.15.0.tar.gz
+/petsc4py-3.15.0.tar.gz
+/petsc-with-docs-3.15.1.tar.gz
+/petsc4py-3.15.1.tar.gz
+/petsc-with-docs-3.15.2.tar.gz
+/petsc4py-3.15.2.tar.gz
+/petsc-with-docs-3.15.3.tar.gz
+/petsc4py-3.15.3.tar.gz
+/petsc-with-docs-3.15.4.tar.gz
+/petsc4py-3.15.4.tar.gz
+/petsc-with-docs-3.16.0.tar.gz
+/petsc4py-3.16.0.tar.gz
+/petsc-with-docs-3.16.3.tar.gz
+/petsc4py-3.16.3.tar.gz
+/petsc-with-docs-3.16.4.tar.gz
+/petsc4py-3.16.4.tar.gz

petsc-3.13-fix_mumps_includes.patch

@@ -0,0 +1,11 @@
+--- a/config/BuildSystem/config/packages/MUMPS.orig.py	2020-03-30 05:33:12.000000000 +0200
++++ b/config/BuildSystem/config/packages/MUMPS.py	2020-04-03 17:01:49.237255499 +0200
+@@ -14,7 +14,7 @@
+                             ['libcmumps.a','libdmumps.a','libsmumps.a','libzmumps.a','libmumps_common.a','libpord.a','libmpiseq.a'],
+                             ['libcmumps.a','libdmumps.a','libsmumps.a','libzmumps.a','libmumps_common.a','libpord.a','libpthread.a','libmpiseq.a']]
+     self.functions        = ['dmumps_c']
+-    self.includes         = ['dmumps_c.h']
++    self.includes         = ['MUMPS/dmumps_c.h']
+     #
+     self.fc               = 1
+     self.precisions       = ['single','double']

petsc-3.13.0-fix_metis64.patch

@@ -0,0 +1,22 @@
+--- a/config/BuildSystem/config/packages/metis.orig.py	2020-03-29 16:29:06.000000000 +0200
++++ b/config/BuildSystem/config/packages/metis.py	2020-04-03 18:00:37.013851959 +0200
+@@ -8,8 +8,8 @@
+     self.download          = ['git://https://bitbucket.org/petsc/pkg-metis.git','https://bitbucket.org/petsc/pkg-metis/get/'+self.gitcommit+'.tar.gz']
+     self.downloaddirnames  = ['petsc-pkg-metis']
+     self.functions         = ['METIS_PartGraphKway']
+-    self.includes          = ['metis.h']
+-    self.liblist           = [['libmetis.a'],['libmetis.a','libexecinfo.a']]
++    self.includes          = ['metis64.h']
++    self.liblist           = [['libmetis64.a'],['libmetis64.a','libexecinfo.a']]
+     self.hastests          = 1
+     self.useddirectly      = 0
+     return
+@@ -50,7 +50,7 @@
+     config.package.Package.configureLibrary(self)
+     oldFlags = self.compilers.CPPFLAGS
+     self.compilers.CPPFLAGS += ' '+self.headers.toString(self.include)
+-    if not self.checkCompile('#include "metis.h"', '#if (IDXTYPEWIDTH != '+ str(self.getDefaultIndexSize())+')\n#error incompatible IDXTYPEWIDTH\n#endif'):
++    if not self.checkCompile('#include "metis64.h"', '#if (IDXTYPEWIDTH != '+ str(self.getDefaultIndexSize())+')\n#error incompatible IDXTYPEWIDTH\n#endif'):
+       if self.defaultIndexSize == 64:
+         msg= '--with-64-bit-indices option requires a metis build with IDXTYPEWIDTH=64.\n'
+       else:

petsc-3.14-hypre_2.11.2_reverting.patch

@@ -3,7 +3,7 @@ From: Satish Balay <balay@mcs.anl.gov>
 Date: Fri, 30 Mar 2018 09:53:12 -0500
 Subject: [PATCH] hypre: update to version 2.14.0
 
-Reported-by: Antonio Trande <anto.trande@gmail.com>
+Reported-by: Antonio Trande <sagitter@fedoraproject.org>
 ---
  config/BuildSystem/config/packages/hypre.py | 2 +-
  src/mat/impls/hypre/mhypre.c                | 2 +-
@@ -13,26 +13,22 @@ diff --git a/config/BuildSystem/config/packages/hypre.py b/config/BuildSystem/co
 index 1249b39..620e516 100644
 --- a/config/BuildSystem/config/packages/hypre.py
 +++ b/config/BuildSystem/config/packages/hypre.py
-@@ -4,7 +4,7 @@ import os
- class Configure(config.package.GNUPackage):
+@@ -5,7 +5,7 @@
    def __init__(self, framework):
      config.package.GNUPackage.__init__(self, framework)
--    self.gitcommit = 'v2.12.0'
-+    self.gitcommit = 'v2.15.1'
-     self.download  = ['git://https://github.com/LLNL/hypre','https://github.com/LLNL/hypre/archive/'+self.gitcommit+'.tar.gz']
-     self.functions = ['HYPRE_IJMatrixCreate']
-     self.includes  = ['HYPRE.h']
-diff --git a/src/mat/impls/hypre/mhypre.c b/src/mat/impls/hypre/mhypre.c
-index 8a51581..65595f2 100644
---- a/src/mat/impls/hypre/mhypre.c
+     self.version         = '2.19.0'
+-    self.minversion      = '2.14'
++    self.minversion      = '2.11.2'
+     self.versionname     = 'HYPRE_RELEASE_VERSION'
+     self.versioninclude  = 'HYPRE_config.h'
+     self.requiresversion = 1
+--- a/src/mat/impls/hypre/mhypre.c	
 +++ b/src/mat/impls/hypre/mhypre.c
-@@ -1450,6 +1450,6 @@ PETSC_EXTERN PetscErrorCode MatCreate_HYPRE(Mat B)
+@@ -2131,6 +2131,6 @@
  static PetscErrorCode hypre_array_destroy(void *ptr)
  {
     PetscFunctionBegin;
--   hypre_TFree(ptr);
-+   hypre_TFree(ptr,HYPRE_MEMORY_HOST);
+-   hypre_TFree(ptr,HYPRE_MEMORY_HOST);
++   hypre_TFree(ptr);
     PetscFunctionReturn(0);
  }
--- 
-2.10.5

petsc-3.14.1-fix_pkgconfig_file.patch

@@ -0,0 +1,11 @@
+--- a/config/PETSc/Configure.orig.py	2020-03-30 05:33:12.000000000 +0200
++++ b/config/PETSc/Configure.py	2020-04-04 22:58:19.770481378 +0200
+@@ -148,7 +148,7 @@
+     if not os.path.exists(os.path.join(self.petscdir.dir,self.arch.arch,'lib','pkgconfig')):
+       os.makedirs(os.path.join(self.petscdir.dir,self.arch.arch,'lib','pkgconfig'))
+     with open(os.path.join(self.petscdir.dir,self.arch.arch,'lib','pkgconfig',petsc_pc),'w') as fd:
+-      cflags_inc = ['-I${includedir}']
++      cflags_inc = ['-I${includedir}/petsc']
+       if self.framework.argDB['prefix']:
+         fd.write('prefix='+self.installdir.dir+'\n')
+       else:

petsc-3.15.0-fix_sundials_version.patch

@@ -0,0 +1,13 @@
+--- a/config/BuildSystem/config/packages/sundials2.orig.py	2019-09-30 01:36:08.000000000 +0200
++++ b/config/BuildSystem/config/packages/sundials2.py	2020-04-04 16:15:52.074244560 +0200
+@@ -3,8 +3,8 @@
+ class Configure(config.package.GNUPackage):
+   def __init__(self, framework):
+     config.package.GNUPackage.__init__(self, framework)
+-    self.version          = '2.5.0'
+-    self.maxversion       = '2.5.100000'
++    self.version          = '5.2.0'
++    self.maxversion       = '5.7.000000'
+     self.versionname      = 'SUNDIALS_PACKAGE_VERSION'
+     self.download         = ['http://ftp.mcs.anl.gov/pub/petsc/externalpackages/sundials-'+self.version+'p1.tar.gz']
+     self.downloaddirnames = ['sundials']

petsc-3.4.1-avoid_fake_MKL_detection.patch

@@ -0,0 +1,13 @@
+--- a/config/BuildSystem/config/packages/BlasLapack.orig.py	2020-11-03 19:01:59.000000000 +0100
++++ b/config/BuildSystem/config/packages/BlasLapack.py	2020-11-09 10:37:06.551705855 +0100
+@@ -546,8 +546,8 @@
+     '''Check for Intel MKL library'''
+     self.libraries.saveLog()
+     if self.libraries.check(self.dlib, 'mkl_set_num_threads'):
+-      self.mkl = 1
+-      self.addDefine('HAVE_MKL',1)
++      self.mkl = 0
++      self.addDefine('HAVE_MKL',0)
+       '''Set include directory for mkl.h and friends'''
+       '''(the include directory is in CPATH if mklvars.sh has been sourced.'''
+       ''' if the script hasn't been sourced, we still try to pick up the include dir)'''

petsc-disable_petscnagupgrade.patch

@@ -1,17 +0,0 @@
-diff --git a/lib/petsc/conf/rules b/lib/petsc/conf/rules
-index c6cfba4..7491faf 100644
---- lib/petsc/conf/rules
-+++ lib/petsc/conf/rules
-@@ -37,9 +37,10 @@ chklib_dir: chk_makej
- 	@if [ ! -d "${INSTALL_LIB_DIR}" ]; then \
- 	  echo Making directory ${INSTALL_LIB_DIR} for library; ${MKDIR} ${INSTALL_LIB_DIR} ; fi
- 
--
- # 3. Check if the shared libs are out of date
--chkopts: chk_upgrade
-+chkopts:
-+	@true
-+chkopts_disabled: chk_upgrade
- 	@for LIBNAME in ${SHLIBS}; do \
- 	  library=${INSTALL_LIB_DIR}/$$LIBNAME.a; \
- 	sharedlibrary=${INSTALL_LIB_DIR}/$$LIBNAME.${SL_LINKER_SUFFIX}; \

petsc-porting_to_python311.patch

@@ -0,0 +1,11 @@
+--- a/src/petsc4py.PETSc.origin.c	2022-01-06 03:57:32.000000000 +0100
++++ b/src/petsc4py.PETSc.c	2022-01-12 20:44:44.434469854 +0100
+@@ -193,7 +193,7 @@
+ #define CYTHON_FAST_PYCCALL  (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1)
+ #endif
+ #if CYTHON_USE_PYLONG_INTERNALS
+-  #include "longintrepr.h"
++  #include "cpython/longintrepr.h"
+   #undef SHIFT
+   #undef BASE
+   #undef MASK

sources

@@ -1 +1,2 @@
-SHA512 (petsc-3.11.3.tar.gz) = e545f69e87bc72950939ff3cec3e0ba225a5b3e7f1cb93b0fb6123194eb7240ac1d97ba397235d8ab872c653caab1427673124e5e1e706b796c0ae46ec1bcffa
+SHA512 (petsc-with-docs-3.16.4.tar.gz) = 55a835b63bdf30fd50dc327dc9fca94f8eb80fc5bf16f43238e89880d8137992028fe8a6906d2b59967370a9040456e26db27bfebfd0a4b88ea698f49de2f839
+SHA512 (petsc4py-3.16.4.tar.gz) = f431461ed2464651b1adb1f60f2e29913bb5bf889feb06a494c88bf43192733809b1a65724e29b4ec14ecb6e012af92a62a58c3fa18b50cf30c556a69e0aba7b