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Release 3.15.0| PETSc4py 3.15.0

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This commit is contained in:
Antonio Trande 2021-04-18 19:20:01 +02:00
parent 5ee887765f
commit d293ecb508
5 changed files with 52 additions and 57 deletions
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2
.gitignore vendored
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@ -30,3 +30,5 @@
/petsc-3.14.4.tar.gz
/petsc-3.14.5.tar.gz
/petsc-3.14.6.tar.gz
/petsc-with-docs-3.15.0.tar.gz
/petsc4py-3.15.0.tar.gz

13
petsc-3.13.0-fix_sundials_version.patch
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@ -1,13 +0,0 @@
--- a/config/BuildSystem/config/packages/sundials.orig.py 2019-09-30 01:36:08.000000000 +0200
+++ b/config/BuildSystem/config/packages/sundials.py 2020-04-04 16:15:52.074244560 +0200
@@ -3,8 +3,8 @@
class Configure(config.package.GNUPackage):
def __init__(self, framework):
config.package.GNUPackage.__init__(self, framework)
- self.version = '2.5.0'
- self.maxversion = '2.5.100000'
+ self.version = '5.2.0'
+ self.maxversion = '5.2.000000'
self.versionname = 'SUNDIALS_PACKAGE_VERSION'
self.download = ['http://ftp.mcs.anl.gov/pub/petsc/externalpackages/sundials-'+self.version+'p1.tar.gz']
self.functions = ['CVSpgmr']

13
petsc-3.15.0-fix_sundials_version.patch Normal file
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@ -0,0 +1,13 @@
--- a/config/BuildSystem/config/packages/sundials2.orig.py 2019-09-30 01:36:08.000000000 +0200
+++ b/config/BuildSystem/config/packages/sundials2.py 2020-04-04 16:15:52.074244560 +0200
@@ -3,8 +3,8 @@
class Configure(config.package.GNUPackage):
def __init__(self, framework):
config.package.GNUPackage.__init__(self, framework)
- self.version = '2.5.0'
- self.maxversion = '2.5.100000'
+ self.version = '5.2.0'
+ self.maxversion = '5.7.000000'
self.versionname = 'SUNDIALS_PACKAGE_VERSION'
self.download = ['http://ftp.mcs.anl.gov/pub/petsc/externalpackages/sundials-'+self.version+'p1.tar.gz']
self.downloaddirnames = ['sundials']

78
petsc.spec
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@ -8,7 +8,7 @@
%bcond_without pycheck
%endif
%global pymodule_name petsc4py
%global pymodule_version 3.14.1
%global pymodule_version 3.15.0
#
## Debug builds ?
@ -33,13 +33,8 @@
%bcond_without blas64
%endif
%if 0%{?fedora} >= 33
%global blaslib flexiblas
%global blasvar %{nil}
%else
%global blaslib openblas
%global blasvar p
%endif
#
## PETSC looks incompatible with serial MUMPS
@ -52,11 +47,9 @@
#
## Suitesparse
## Currently, suitesparse-5.4.0 is available on Fedora 32+, but this version of PETSc needs the 5.6.0 at least
## This version of PETSc needs the 5.6.0 at least
%bcond_with suitesparse
%if 0%{?fedora} && 0%{?fedora} >= 32
%bcond_with suitesparse64
%endif
#
## SuperLUDIST needs parmetis
@ -208,7 +201,8 @@
%if %{with python} \
--with-python=1 \\\
--with-python-exec=%{__python3} \\\
--download-petsc4py=1 \\\
--with-petsc4py=1 \\\
--with-petsc4py-test-np="`/usr/bin/getconf _NPROCESSORS_ONLN`" \\\
%endif \
%if 0%{?fedora} \
--with-cxxlib-autodetect=0 \\\
@ -276,15 +270,16 @@
%global mpichversion %(rpm -qi mpich | awk -F': ' '/Version/ {print $2}')
%global openmpiversion %(rpm -qi openmpi | awk -F': ' '/Version/ {print $2}')
%global releasever 3.14
%global releasever 3.15
Name: petsc
Summary: Portable Extensible Toolkit for Scientific Computation
Version: %{releasever}.6
Version: %{releasever}.0
Release: 1%{?dist}
License: BSD
URL: https://www.mcs.anl.gov/petsc
Source0: https://www.mcs.anl.gov/petsc/mirror/release-snapshots/petsc-%{version}.tar.gz
Source0: https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-with-docs-%{version}.tar.gz
Source1: https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc4py-%{version}.tar.gz
## Remove rpath flags
Patch0: %{name}-3.11-no-rpath.patch
@ -297,7 +292,7 @@ Patch2: %{name}-3.14-hypre_2.11.2_reverting.patch
Patch3: %{name}-3.13-fix_mumps_includes.patch
Patch4: %{name}-3.13.0-fix_metis64.patch
Patch5: %{name}-3.13.0-fix_sundials_version.patch
Patch5: %{name}-3.15.0-fix_sundials_version.patch
Patch6: %{name}-3.14.1-fix_pkgconfig_file.patch
Patch7: %{name}-3.4.1-avoid_fake_MKL_detection.patch
@ -568,6 +563,12 @@ Portable Extensible Toolkit for Scientific Computation (developer files).
%prep
%setup -qc
%if %{with python}
%setup -q -T -D -a 1
cp -a petsc4py-%{version}/* %{name}-%{version}/
rm -rf %{name}-%{version}/*.egg-info
rm -rf petsc4py-%{version}
%endif
pushd %{name}-%{version}
@ -697,15 +698,13 @@ pushd buildopenmpi_dir
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
make \
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/buildopenmpi_dir PETSC_ARCH=%{_arch} all
%if %{with python}
cd %{_arch}/externalpackages/petsc4py
export PETSC_ARCH=%{_arch}
export PETSC_DIR=../../../
export PETSC_DIR=./
%py3_build
unset PETSC_ARCH
unset PETSC_DIR
cd ../../..
%endif
%{_openmpi_unload}
@ -737,17 +736,15 @@ pushd buildmpich_dir
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
make \
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/buildmpich_dir PETSC_ARCH=%{_arch} all
%if %{with python}
cd %{_arch}/externalpackages/petsc4py
export PETSC_ARCH=%{_arch}
export PETSC_DIR=../../../
export PETSC_DIR=./
%py3_build
unset PETSC_ARCH
unset PETSC_DIR
cd ../../..
%endif
%{_mpich_unload}
popd
%endif
@ -843,11 +840,9 @@ sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|${PETSC_DIR}/%{_lib}/openmpi/lib|g' -i
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|${PETSC_DIR}/%{_lib}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/rules
%if %{with python}
pushd %{_arch}/externalpackages/petsc4py
export PETSC_ARCH=%{_arch}
export PETSC_DIR=../../../
export PETSC_DIR=./
%py3_install
popd
# Install petsc4py files into MPI directories
%if 0%{?rhel}
@ -899,11 +894,10 @@ sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|${PETSC_DIR}/%{_lib}/mpich/lib|g' -i %{
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|${PETSC_DIR}/%{_lib}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/rules
%if %{with python}
pushd %{_arch}/externalpackages/petsc4py
export PETSC_ARCH=%{_arch}
export PETSC_DIR=../../../
export PETSC_DIR=./
%py3_install
popd
# Install petsc4py files into MPI directories
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/mpich
@ -933,12 +927,6 @@ popd
cp -a %{name}-%{version}/docs/* %{buildroot}%{_pkgdocdir}
#
%ldconfig_scriptlets
%if %{with arch64}
%ldconfig_scriptlets -n petsc64
%endif
%check
%if %{with openmpi}
@ -962,9 +950,9 @@ xvfb-run -a make all test -C buildopenmpi_dir V=1
%if %{with python}
%if %{with pycheck}
pushd buildopenmpi_dir/%{_arch}/externalpackages/petsc4py
pushd buildopenmpi_dir
export PETSC_ARCH=%{_arch}
export PETSC_DIR=../../../
export PETSC_DIR=./
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/openmpi
%endif
@ -999,9 +987,9 @@ xvfb-run -a make all test -C buildmpich_dir V=1
%if %{with python}
%if %{with pycheck}
pushd buildmpich_dir/%{_arch}/externalpackages/petsc4py
pushd buildmpich_dir
export PETSC_ARCH=%{_arch}
export PETSC_DIR=../../../
export PETSC_DIR=./
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/mpich
%endif
@ -1130,6 +1118,10 @@ xvfb-run -a make all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version
%endif
%changelog
* Fri Apr 02 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.15.0-1
- Release 3.15.0
- PETSc4py 3.15.0
* Fri Apr 02 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.14.6-1
- Release 3.14.6
@ -1138,7 +1130,7 @@ xvfb-run -a make all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version
* Sun Feb 07 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.14.4-1
- Release 3.14.4
- Release petsc4py-3.14.1
- Release PETSc4py-3.14.1
* Tue Feb 02 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.14.2-5
- Rebuild for OpenMPI-4.1.0 and MPICH-3.4.1
@ -1148,11 +1140,11 @@ xvfb-run -a make all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Sun Dec 13 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.14.2-3
- Obsolete the stand-alone petsc4py packages
- This package now provides petsc4py/python-petsc rpms
- Obsolete the stand-alone PETSc4py packages
- This package now provides PETSc4py/python-petsc rpms
* Wed Dec 09 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.14.2-2
- Compile petsc4py code inside
- Compile PETSc4py code inside
* Sat Dec 05 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.14.2-1
- Release 3.14.2

3
sources
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@ -1 +1,2 @@
SHA512 (petsc-3.14.6.tar.gz) = 9766e164446ac5a69b8bf761a0e8a235b1a2b85ed9c96a7fd59e668ae4cceb9d9559a38b175b4aa9747e78d7b44d0018a3c02748dcd3d783d28f861f8382d44c
SHA512 (petsc-with-docs-3.15.0.tar.gz) = d141f98742b3a831d2efede7cf3c6ed12380a052c4243dcad2a770455c15b1fbd0ecc3191368ffd110491f3b239af140f7a0ebab87ceb439eb497336e0cf6f2c
SHA512 (petsc4py-3.15.0.tar.gz) = a5200967b39637171fa9426a639b37c474ee893450da53c882648d85c5d79f694def505a3dec5dca094629eda1ff7ba5572121d61372b1d74e52f277f007ff7f