petsc/petsc.spec

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RPMSpec
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# Broken package_note links in rules and variables files
# Disabling this functionality
%undefine _package_note_file
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# Disable LTO
# undefined-non-weak-symbol libpetsc.so.3.17.4_glibcxx_assert_fail
%undefine _ld_as_needed
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%global _lto_cflags %{nil}
# Testing libpetsc ?
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%bcond_without check
#
# Python binding and its testing
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%bcond_without python
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# Python tests need Cython
%bcond_with pycheck
%global pymodule_name petsc4py
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%global pymodule_version %{version}
#
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## Debug builds ?
%bcond_with debug
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#
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## Fix Epoch in EPEL9
%if 0%{?el9}
%global epoch 1
%else
%global epoch 0
%endif
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%bcond_without mpich
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%bcond_without openmpi
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%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
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%bcond_without arch64
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%else
%bcond_with arch64
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%endif
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%bcond_without blas
%if %{with arch64}
%bcond_without blas64
%endif
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%if 0%{?fedora} || 0%{?rhel} >= 9
%global blaslib flexiblas
%global blasvar %{nil}
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%else
%global blaslib openblas
%global blasvar %{nil}
%endif
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#
## PETSC looks incompatible with serial MUMPS
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%bcond_without mumps_serial
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#
## Sundials needs mpi ?
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%bcond_with sundials_serial
#
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%bcond_without superlu
#
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## Suitesparse
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## This version of PETSc needs the 5.6.0 at least
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%bcond_with suitesparse
%bcond_with suitesparse64
#
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## SuperLUDIST needs parmetis
%if 0%{?fedora} || 0%{?rhel} > 7
%bcond_without superludist >= 6.3.0
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%bcond_with cgns
%bcond_without hdf5
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%else
# Needed superludist >= 6.3.0
%bcond_with superludist
## hdf5 is required by cgns
## See rhbz#1904164
%bcond_with cgns
%bcond_with hdf5
%endif
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%bcond_with superlumt
#
## Tetgen
%bcond_with tetgen
#
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## Metis
%bcond_without metis
%if 0%{?fedora} || 0%{?rhel} < 8
%bcond_without metis64
%endif
#
# 'scalapack' is required by 'MUMPS'
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%if %{with openmpi}
%bcond_without mpi
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# PETSC-3.* is incompatible with Sundials 3+
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%bcond_with sundials
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%bcond_without scalapack
%bcond_without mumps
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%bcond_without ptscotch
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%bcond_without hypre
%endif
%if %{with mpich}
%bcond_without mpi
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# PETSC-3.* is incompatible with Sundials 3+
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%bcond_with sundials
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%bcond_without scalapack
%bcond_without mumps
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%bcond_without ptscotch
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%bcond_without hypre
%endif
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%global petsc_build_options \\\
%if %{with debug} \
CFLAGS="-O0 -g -Wl,-z,now -fPIC" CXXFLAGS="-O0 -g -Wl,-z,now -fPIC" FFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules" COPTFLAGS="-O0 -g -Wl,-z,now" \\\
CXXOPTFLAGS="-O0 -g -Wl,-z,now" FOPTFLAGS="-O0 -g -Wl,-z,now -I%{_libdir}/gfortran/modules" LDFLAGS="$LDFLAGS -fPIC" \\\
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FCFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules" \\\
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%else \
CFLAGS="$CFLAGS -O3 -fPIC" CXXFLAGS="$CXXFLAGS -O3 -fPIC" FFLAGS="$FFLAGS -O3 -fPIC" LDFLAGS="$LDFLAGS -fPIC" \\\
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COPTFLAGS="$CFLAGS -O3" CXXOPTFLAGS="$CXXFLAGS -O3" FOPTFLAGS="$FFLAGS -O3" \\\
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FCFLAGS="$FFLAGS -O3 -fPIC" \\\
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%endif \
--CC_LINKER_FLAGS="$LDFLAGS" \\\
--FC_LINKER_FLAGS="$LDFLAGS -lgfortran" \\\
--with-default-arch=0 --with-make=1 \\\
--with-cmake-exec=%{_bindir}/cmake3 --with-ctest-exec=%{_bindir}/ctest3 \\\
--with-single-library=1 \\\
--with-precision=double \\\
--with-petsc-arch=%{_arch} \\\
--with-clanguage=C \\\
--with-shared-libraries=1 \\\
--with-fortran-interfaces=1 \\\
--with-windows-graphics=0 \\\
--CC=gcc \\\
--FC=gfortran \\\
--CXX=g++ \\\
--with-shared-ld=ld \\\
--with-pic=1 \\\
--with-clib-autodetect=0 \\\
--with-fortranlib-autodetect=0 \\\
--with-threadsafety=0 --with-log=1 \\\
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--with-mkl_sparse=0 \\\
--with-mkl_sparse_optimize=0 \\\
--with-mkl_cpardiso=0 \\\
--with-mkl_pardiso=0 \\\
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--with-python=0 \\\
--with-cxxlib-autodetect=1 \\\
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%if %{with debug} \
--with-debugging=1 \\\
%else \
--with-debugging=0 \\\
%endif \
%if %{with mumps_serial} \
--with-mumps-serial=1 \\\
%endif \
--with-mpi=0 \\\
%if %{with hdf5} \
--with-hdf5=1 \\\
--with-hdf5-include= \\\
--with-hdf5-lib="-lhdf5 -lhdf5_hl" \\\
%endif \
%if %{with cgns} \
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--with-cgns=0 \\\
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%endif \
--with-x=1 \\\
--with-openmp=0 \\\
--with-hwloc=0 \\\
--with-ssl=0 \\\
%if %{with sundials_serial} \
--with-sundials=1 \\\
--with-sundials-include=%{_includedir} \\\
--with-sundials-lib="-lsundials_nvecserial -lsundials_cvode" \\\
%endif \
--with-pthread=1 \\\
--with-valgrind=1
%global petsc_mpibuild_options \\\
%if %{with debug} \
CFLAGS="-O0 -g -Wl,-z,now -fPIC" CXXFLAGS="-O0 -g -Wl,-z,now -fPIC" FFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}" COPTFLAGS="-O0 -g -Wl,-z,now" \\\
CXXOPTFLAGS="-O0 -g -Wl,-z,now" FOPTFLAGS="-O0 -g -Wl,-z,now -I${MPI_FORTRAN_MOD_DIR}" LDFLAGS="$LDFLAGS -fPIC" \\\
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FCFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}" \\\
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%else \
CFLAGS="$CFLAGS -O3 -fPIC" CXXFLAGS="$CXXFLAGS -O3 -fPIC" FFLAGS="$FFLAGS -O3 -fPIC" LDFLAGS="$LDFLAGS -fPIC" \\\
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COPTFLAGS="$CFLAGS -O3" CXXOPTFLAGS="$CXXFLAGS -O3" FOPTFLAGS="$FFLAGS -O3" \\\
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FCFLAGS="$FFLAGS -O3 -fPIC" \\\
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%endif \
--CC_LINKER_FLAGS="$LDFLAGS" \\\
--with-default-arch=0 --with-make=1 \\\
--with-cmake-exec=%{_bindir}/cmake3 --with-ctest-exec=%{_bindir}/ctest3 \\\
--with-single-library=1 \\\
--with-precision=double \\\
--with-petsc-arch=%{_arch} \\\
--with-clanguage=C \\\
--with-shared-libraries=1 \\\
--with-fortran-interfaces=1 \\\
--with-windows-graphics=0 \\\
--with-cc=${MPI_BIN}/mpicc \\\
--with-cxx=${MPI_BIN}/mpicxx \\\
--with-fc=${MPI_BIN}/mpif90 \\\
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--with-shared-ld=ld \\\
--with-pic=1 \\\
--with-clib-autodetect=0 \\\
--with-fortranlib-autodetect=0 \\\
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--with-mkl_sparse=0 \\\
--with-mkl_sparse_optimize=0 \\\
--with-mkl_cpardiso=0 \\\
--with-mkl_pardiso=0 \\\
%if %{with python} \
--with-python=1 \\\
--with-python-exec=%{__python3} \\\
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--with-petsc4py=1 \\\
--with-petsc4py-test-np="`/usr/bin/getconf _NPROCESSORS_ONLN`" \\\
%endif \
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--with-cxxlib-autodetect=1 \\\
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--with-threadsafety=0 --with-log=1 \\\
%if %{with debug} \
--with-debugging=1 \\\
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--with-mpiexec="${MPI_BIN}/mpiexec -n `/usr/bin/getconf _NPROCESSORS_ONLN` --mca btl_base_warn_component_unused 0 --mca orte_base_help_aggregate 0" \\\
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%else \
--with-debugging=0 \\\
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--with-mpiexec="${MPI_BIN}/mpiexec -n `/usr/bin/getconf _NPROCESSORS_ONLN` --mca btl_base_warn_component_unused 0" \\\
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%endif \
%if %{with scalapack} \
--with-scalapack=1 \\\
--with-scalapack-lib="-L$MPI_LIB -lscalapack" \\\
--with-scalapck-include="" \\\
%endif \
%if %{with mpi} \
--with-mpi=1 \\\
%endif \
%if %{with cgns} \
--with-cgns=1 \\\
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--with-cgns-include=%{_includedir} \\\
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--with-cgns-lib=-lcgns \\\
%endif \
%if %{with hdf5} \
--with-hdf5=1 \\\
--with-hdf5-include= \\\
--with-hdf5-lib="-L$MPI_LIB -lhdf5 -lhdf5_hl" \\\
%endif \
%if %{with ptscotch} \
--with-ptscotch=1 \\\
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--with-ptscotch-include=$MPI_INCLUDE/scotch \\\
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--with-ptscotch-lib="-L$MPI_LIB -lptscotch -lscotch -lptscotcherr -lscotcherr" \\\
%endif \
%if %{with mumps} \
--with-mumps=1 \\\
%endif \
%if %{with sundials} \
--with-sundials=1 \\\
--with-sundials-include=$MPI_INCLUDE \\\
--with-sundials-lib=-lsundials_nvecparallel \\\
%endif \
%if %{with superludist} \
--with-superlu_dist=1 \\\
--with-superlu_dist-include=$MPI_INCLUDE/superlu_dist \\\
--with-superlu_dist-lib=-lsuperlu_dist \\\
%endif \
--with-x=1 \\\
--with-openmp=0 \\\
--with-hwloc=0 \\\
--with-ssl=0 \\\
%if %{with hypre} \
--with-hypre=1 \\\
--with-hypre-include=$MPI_INCLUDE/hypre \\\
--with-hypre-lib="-L$MPI_LIB -lHYPRE" \\\
%endif \
%if %{with fftw} \
--with-fftw=1 \\\
--with-fftw-include= \\\
--with-fftw-lib="-L$MPI_LIB -lfftw3_mpi -lfftw3" \\\
%endif \
--with-pthread=1 \\\
--with-valgrind=1
%global mpichversion %(rpm -qi mpich | awk -F': ' '/Version/ {print $2}')
%global openmpiversion %(rpm -qi openmpi | awk -F': ' '/Version/ {print $2}')
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%global majorver 3
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%global releasever 3.19
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Name: petsc
Summary: Portable Extensible Toolkit for Scientific Computation
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Version: %{releasever}.6
Release: %autorelease
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License: BSD
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URL: https://petsc.org/
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Source0: https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-with-docs-%{version}.tar.gz
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# These files have been generated by Cython-0.29.36
# PETSC-3.19 is not compatible with Cython-3.0.0 yet
# See https://gitlab.com/petsc/petsc/-/issues/1431
Source2: %{name}-PETSc_cython0.29.36.c
Source3: %{name}-PETSc_cython0.29.36.h
Source4: %{name}-PETSc_api_cython0.29.36.h
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## Remove rpath flags
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Patch0: %{name}-3.11-no-rpath.patch
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## Rename library name for 64-bit integer package
Patch1: %{name}-lib64.patch
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Patch3: %{name}-3.19.4-fix_mumps_includes.patch
Patch4: %{name}-3.19.4-fix_metis64.patch
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Patch5: %{name}-3.15.0-fix_sundials_version.patch
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Patch6: %{name}-3.14.1-fix_pkgconfig_file.patch
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Patch7: %{name}-3.17.0-avoid_fake_MKL_detection.patch
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%if %{with superlu}
BuildRequires: SuperLU-devel >= 5.2.0
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%endif
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%if %{with superlumt}
BuildRequires: SuperLUMT-devel
%endif
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%if %{with mumps_serial}
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BuildRequires: MUMPS-devel >= 5.2.1
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%endif
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%if %{with metis}
BuildRequires: metis-devel >= 5.1.0
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%endif
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%if %{with suitesparse}
BuildRequires: suitesparse-devel >= 5.6.0
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%endif
%if %{with blas}
BuildRequires: %{blaslib}-devel
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%endif
BuildRequires: chrpath
BuildRequires: gcc, gcc-c++, cmake3
BuildRequires: gcc-gfortran
BuildRequires: make
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BuildRequires: libX11-devel
BuildRequires: python3-devel
BuildRequires: python3-setuptools
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BuildRequires: pcre2-devel
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%if %{with hdf5}
BuildRequires: hdf5-devel
%endif
%if %{with cgns}
BuildRequires: cgnslib-devel
BuildRequires: hdf5-devel
%endif
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BuildRequires: tcsh
%if %{with tetgen}
BuildRequires: tetgen-devel
%endif
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BuildRequires: xorg-x11-server-Xvfb
BuildRequires: valgrind-devel
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%description
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
and routines for the scalable (parallel) solution of scientific applications
modeled by partial differential equations.
%package devel
Summary: Portable Extensible Toolkit for Scientific Computation (developer files)
Requires: %{name}%{?_isa} = %{version}-%{release}
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Requires: gcc-gfortran%{?_isa}
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%description devel
Portable Extensible Toolkit for Scientific Computation (developer files).
%package doc
Summary: Portable Extensible Toolkit for Scientific Computation (documentation files)
BuildRequires: python3-sphinx
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BuildArch: noarch
%description doc
Portable Extensible Toolkit for Scientific Computation.
PDF and HTML documentation files.
%if %{with arch64}
%package -n petsc64
Summary: Portable Extensible Toolkit for Scientific Computation (64bit INTEGER)
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%if %{with metis64}
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BuildRequires: metis64-devel >= 5.1.0
%endif
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%description -n petsc64
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
and routines for the scalable (parallel) solution of scientific applications
modeled by partial differential equations (64bit INTEGER).
%package -n petsc64-devel
Requires: %{name}64%{?_isa} = %{version}-%{release}
Requires: gcc-gfortran%{?_isa}
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Summary: Portable Extensible Toolkit for Scientific Computation (64bit INTEGER)
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%description -n petsc64-devel
Portable Extensible Toolkit for Scientific Computation (developer files)
(64bit INTEGER).
%endif
#############################################################################
#########
%if %{with openmpi}
%package openmpi
Summary: Portable Extensible Toolkit for Scientific Computation (OpenMPI)
BuildRequires: openmpi-devel
%if %{with hdf5}
BuildRequires: hdf5-openmpi-devel
%endif
%if %{with cgns}
BuildRequires: cgnslib-devel
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BuildRequires: hdf5-openmpi-devel
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%endif
%if %{with ptscotch}
BuildRequires: ptscotch-openmpi-devel
%endif
%if %{with scalapack}
BuildRequires: scalapack-openmpi-devel
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%if 0%{?rhel}
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BuildRequires: blacs-openmpi-devel
%endif
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%endif
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%if %{with mumps}
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BuildRequires: MUMPS-openmpi-devel >= 5.2.1
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%endif
%if %{with sundials}
BuildRequires: sundials-openmpi-devel
%endif
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%if %{with superludist}
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BuildRequires: superlu_dist-openmpi-devel >= 6.3.0
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%endif
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%if %{with fftw}
BuildRequires: fftw-devel
BuildRequires: fftw-openmpi-devel
%endif
%if %{with hypre}
BuildRequires: hypre-openmpi-devel
%endif
%description openmpi
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
and routines for the scalable (parallel) solution of scientific applications
modeled by partial differential equations.
%package openmpi-devel
Summary: Portable Extensible Toolkit for Scientific Computation (OpenMPI)
Requires: %{name}-openmpi%{?_isa} = %{version}-%{release}
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Requires: openmpi-devel%{?_isa} = %{epoch}:%{openmpiversion}
Requires: hdf5-openmpi-devel%{?_isa}
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%description openmpi-devel
Portable Extensible Toolkit for Scientific Computation (developer files).
%endif
%if %{with python}
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%package -n python3-%{name}-openmpi
Summary: Python3 bindings for OpenMPI PETSc
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%{?python_provide:%python_provide python3-%{name}-openmpi}
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BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-wheel
BuildRequires: hdf5-openmpi-devel
BuildRequires: scalapack-openmpi-devel
BuildRequires: ptscotch-openmpi-devel
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BuildRequires: python3-numpy
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%if 0%{?rhel} || 0%{?fedora} < 39
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BuildRequires: python3-Cython
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%else
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BuildRequires: python3-pip
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%endif
Requires: petsc-openmpi%{?_isa}
Requires: hdf5-openmpi%{?_isa}
Requires: scalapack-openmpi%{?_isa}
Requires: ptscotch-openmpi%{?_isa}
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Requires: openmpi%{?_isa} = %{epoch}:%{openmpiversion}
Requires: MUMPS-openmpi%{?_isa}
Obsoletes: %{pymodule_name}-openmpi < 0:3.14.0-3
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Obsoletes: python3-%{pymodule_name}-openmpi < 0:3.14.0-3
Provides: python3-%{pymodule_name}-openmpi = 0:%{pymodule_version}-%{release}
Provides: python-%{pymodule_name}-openmpi = 0:%{pymodule_version}-%{release}
Provides: %{pymodule_name}-openmpi = 0:%{pymodule_version}-%{release}
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%description -n python3-%{name}-openmpi
This package provides Python3 bindings for OpenMPI PETSc,
the Portable, Extensible Toolkit for Scientific Computation.
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%package -n python3-%{name}-mpich
Summary: Python3 bindings for MPICH PETSc
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%{?python_provide:%python_provide python3-%{name}-mpich}
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BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-wheel
BuildRequires: hdf5-mpich-devel
BuildRequires: scalapack-mpich-devel
BuildRequires: ptscotch-mpich-devel
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BuildRequires: python3-numpy
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%if 0%{?rhel} || 0%{?fedora} < 39
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BuildRequires: python3-Cython
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%else
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BuildRequires: python3-pip
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%endif
Requires: petsc-mpich%{?_isa}
Requires: hdf5-mpich%{?_isa}
Requires: scalapack-openmpi%{?_isa}
Requires: ptscotch-mpich%{?_isa}
Requires: mpich%{?_isa} = 0:%{mpichversion}
Requires: MUMPS-mpich%{?_isa}
Obsoletes: %{pymodule_name}-mpich < 0:3.14.0-3
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Obsoletes: python3-%{pymodule_name}-mpich < 0:3.14.0-3
Provides: python3-%{pymodule_name}-mpich = 0:%{pymodule_version}-%{release}
Provides: python-%{pymodule_name}-mpich = 0:%{pymodule_version}-%{release}
Provides: %{pymodule_name}-mpich = 0:%{pymodule_version}-%{release}
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%description -n python3-%{name}-mpich
This package provides Python3 bindings for MPICH PETSc,
the Portable, Extensible Toolkit for Scientific Computation.
%endif
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######
###############################################################################
######
%if %{with mpich}
%package mpich
Summary: Portable Extensible Toolkit for Scientific Computation (MPICH)
BuildRequires: mpich-devel
%if %{with hdf5}
BuildRequires: hdf5-mpich-devel
%endif
%if %{with cgns}
BuildRequires: cgnslib-devel
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BuildRequires: hdf5-mpich-devel
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%endif
%if %{with ptscotch}
BuildRequires: ptscotch-mpich-devel
%endif
%if %{with scalapack}
BuildRequires: scalapack-mpich-devel
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%if 0%{?rhel}
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BuildRequires: blacs-mpich-devel
%endif
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%endif
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%if %{with mumps}
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BuildRequires: MUMPS-mpich-devel >= 5.2.1
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%endif
%if %{with sundials}
BuildRequires: sundials-mpich-devel
%endif
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%if %{with superludist}
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BuildRequires: superlu_dist-mpich-devel >= 6.3.0
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%endif
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%if %{with hypre}
BuildRequires: hypre-mpich-devel
%endif
%if %{with fftw}
BuildRequires: fftw-devel
BuildRequires: fftw-mpich-devel
%endif
Requires: mpich%{?_isa} = 0:%{mpichversion}
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%description mpich
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
and routines for the scalable (parallel) solution of scientific applications
modeled by partial differential equations.
%package mpich-devel
Summary: Portable Extensible Toolkit for Scientific Computation (MPICH)
Requires: %{name}-mpich%{?_isa} = %{version}-%{release}
Requires: mpich-devel%{?_isa} = 0:%{mpichversion}
Requires: hdf5-mpich-devel%{?_isa}
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%description mpich-devel
Portable Extensible Toolkit for Scientific Computation (developer files).
%endif
######
#############################################################################
%prep
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%setup -qc
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%if %{with python}
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rm -rf %{name}-%{version}/src/binding/petsc4py/src/*.egg-info
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%if 0%{?fedora}
for i in `find . -name 'setup.py' -o -name 'configure' -o -name '*.py'`; do
%py3_shebang_fix $i
done
%endif
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%endif
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pushd %{name}-%{version}
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%patch -P 7 -p1 -b .backup
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popd
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# Remove pregenerated Cython C sources
pushd %{name}-%{version}
#rm $(grep -rl '/\* Generated by Cython')
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popd
%if %{with arch64}
cp -a %{name}-%{version} build64
pushd build64
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%patch -P 1 -p0
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%if %{with metis64}
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%patch -P 4 -p1 -b .metis64
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%endif
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popd
%endif
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pushd %{name}-%{version}
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%patch -P 0 -p0 -b .backup
%patch -P 5 -p1 -b .backup
%patch -P 6 -p1 -b .backup
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popd
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%if %{with openmpi}
cp -a %{name}-%{version} buildopenmpi_dir
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%if 0%{?eln} || 0%{?fedora} > 38
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cp %{SOURCE2} buildopenmpi_dir/src/binding/petsc4py/src/petsc4py/PETSc.c
cp %{SOURCE3} buildopenmpi_dir/src/binding/petsc4py/src/petsc4py/PETSc.h
cp %{SOURCE4} buildopenmpi_dir/src/binding/petsc4py/src/petsc4py/PETSc_api.h
%endif
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%endif
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%if %{with mpich}
cp -a %{name}-%{version} buildmpich_dir
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%if 0%{?eln} || 0%{?fedora} > 38
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cp %{SOURCE2} buildmpich_dir/src/binding/petsc4py/src/petsc4py/PETSc.c
cp %{SOURCE3} buildmpich_dir/src/binding/petsc4py/src/petsc4py/PETSc.h
cp %{SOURCE4} buildmpich_dir/src/binding/petsc4py/src/petsc4py/PETSc_api.h
%endif
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%endif
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# Do NOT move up this patch
pushd %{name}-%{version}
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%patch -P 3 -p1 -b .backup
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popd
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%build
pushd %{name}-%{version}
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%configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran \
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%{petsc_build_options} \
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--with-64-bit-indices=0 \
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%if %{with blas}
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%if 0%{?fedora} || 0%{?rhel} >= 9
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--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar} --with-blaslapack-include=%{_includedir}/%{blaslib} \
%else
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar} --with-openblas-include=%{_includedir}/%{blaslib} \
%endif
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%endif
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%if %{with metis}
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--with-metis=1 \
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%endif
%if %{with tetgen}
--with-tetgen=1 \
--with-tetgen-lib=-ltetgen \
%endif
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%if %{with superlu}
--with-superlu=1 \
--with-superlu-include=%{_includedir}/SuperLU \
--with-superlu-lib=-lsuperlu \
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%endif
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%if %{with suitesparse}
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--with-suitesparse=1 \
--with-suitesparse-include=%{_includedir}/suitesparse \
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--with-suitesparse-lib="-lumfpack -lklu -lcholmod -lamd"
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%endif
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#cat config.log && exit 1
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##
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
make \
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/%{name}-%{version} PETSC_ARCH=%{_arch} all
popd
%if %{with arch64}
pushd build64
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%configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran \
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%{petsc_build_options} \
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--with-64-bit-indices=1 \
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%if %{with metis64}
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--with-metis=1 \
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%endif
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%if %{with blas64}
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%if 0%{?fedora} || 0%{?rhel} >= 9
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--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar}64 --with-blaslapack-include=%{_includedir}/%{blaslib} \
%else
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar}64 --with-openblas-include=%{_includedir}/%{blaslib} \
%endif
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%endif
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%if %{with suitesparse64}
--with-suitesparse=1 \
--with-suitesparse-include=%{_includedir}/suitesparse \
--with-suitesparse-lib="-lumfpack64 -lklu64 -lcholmod64 -lamd64"
%endif
##
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
make \
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/build64 PETSC_ARCH=%{_arch} all
popd
%endif
%if %{with openmpi}
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cd buildopenmpi_dir
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%{_openmpi_load}
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export CC=mpicc
export CXX=mpic++
export FC=mpifort
%configure --with-cc=mpicc --with-cxx=mpic++ --with-fc=mpifort \
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--FC_LINKER_FLAGS="$LDFLAGS -lgfortran -lmpi_mpifh" \
--LIBS=" -lmpi -lmpi_mpifh" \
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%{petsc_mpibuild_options} \
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%if %{with metis}
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--with-metis=1 \
%endif
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%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
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--with-64-bit-indices=0 \
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%endif
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%if %{with blas}
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%if 0%{?fedora} || 0%{?rhel} >= 9
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--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar} --with-blaslapack-include=%{_includedir}/%{blaslib} \
%else
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar} --with-openblas-include=%{_includedir}/%{blaslib} \
%endif
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%endif
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#cat config.log
#exit 1
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
make \
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/buildopenmpi_dir PETSC_ARCH=%{_arch} all
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%if %{with python}
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pushd src/binding/petsc4py
export PETSC_ARCH=%{_arch}
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export PETSC_DIR=../../../
%py3_build
unset PETSC_ARCH
unset PETSC_DIR
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popd
%endif
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%{_openmpi_unload}
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cd ..
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%endif
%if %{with mpich}
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cd buildmpich_dir
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%{_mpich_load}
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export CC=mpicc
export CXX=mpic++
export FC=mpifort
%configure --with-cc=mpicc --with-cxx=mpic++ --with-fc=mpifort \
--FC_LINKER_FLAGS="$LDFLAGS -lgfortran -lfmpich -lmpichf90" \
--LIBS=" -lmpich -lfmpich -lmpichf90" \
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%{petsc_mpibuild_options} \
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%if %{with metis}
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--with-metis=1 \
%endif
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%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
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--with-64-bit-indices=0 \
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%endif
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%if %{with blas}
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%if 0%{?fedora} || 0%{?rhel} >= 9
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--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar} --with-blaslapack-include=%{_includedir}/%{blaslib} \
%else
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar} --with-openblas-include=%{_includedir}/%{blaslib} \
%endif
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%endif
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#cat config.log
#exit 1
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
make \
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/buildmpich_dir PETSC_ARCH=%{_arch} all
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%if %{with python}
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pushd src/binding/petsc4py
export PETSC_ARCH=%{_arch}
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export PETSC_DIR=../../../
%py3_build
unset PETSC_ARCH
unset PETSC_DIR
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popd
%endif
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%{_mpich_unload}
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cd ..
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%endif
%install
pushd %{name}-%{version}
mkdir -p %{buildroot}%{_libdir} %{buildroot}%{_includedir}/%{name}
mkdir -p %{buildroot}%{_fmoddir}/%{name}
mkdir -p %{buildroot}%{_libdir}/%{name}/conf
install -pm 755 %{_arch}/lib/libpetsc.* %{buildroot}%{_libdir}
ln -sf libpetsc.so.%{version} %{buildroot}%{_libdir}/libpetsc.so
ln -sf libpetsc.so.%{version} %{buildroot}%{_libdir}/libpetsc.so.%{releasever}
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ln -sf libpetsc.so.%{version} %{buildroot}%{_libdir}/libpetsc.so.%{majorver}
install -pm 644 %{_arch}/include/*.h %{buildroot}%{_includedir}/%{name}/
install -pm 644 %{_arch}/include/*.mod %{buildroot}%{_fmoddir}/%{name}/
cp -a include/* %{buildroot}%{_includedir}/%{name}/
cp -a %{_arch}/lib/pkgconfig %{buildroot}%{_libdir}/
sed -e 's|${prefix}/lib|${prefix}/%{_lib}|g' -i %{buildroot}%{_libdir}/pkgconfig/PETSc.pc
ln -fs %{_libdir}/pkgconfig/PETSc.pc %{buildroot}%{_libdir}/pkgconfig/petsc.pc
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}%{_libdir}/%{name}/conf/
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}%{_libdir}/%{name}/conf/
install -pm 644 lib/petsc/conf/rules %{buildroot}%{_libdir}/%{name}/conf/
install -pm 644 lib/petsc/conf/variables %{buildroot}%{_libdir}/%{name}/conf/
sed -e 's|%{_builddir}/%{name}-%{version}/%{name}-%{version}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
sed -e 's|%{_builddir}/%{name}-%{version}/%{name}-%{version}/%{_arch}/|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
sed -e 's|-I%{_prefix}/%{_arch}/include|-I%{_includedir}/%{name} -I%{_fmoddir}/%{name}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
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sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}/conf/variables
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}/conf/rules
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscrules
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
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popd
%if %{with arch64}
pushd build64
mkdir -p %{buildroot}%{_libdir} %{buildroot}%{_includedir}/%{name}64
mkdir -p %{buildroot}%{_fmoddir}/%{name}64
mkdir -p %{buildroot}%{_libdir}/%{name}64/conf
mkdir -p %{buildroot}%{_libdir}/pkgconfig
install -pm 755 %{_arch}/lib/libpetsc64.* %{buildroot}%{_libdir}
ln -sf libpetsc64.so.%{version} %{buildroot}%{_libdir}/libpetsc64.so
ln -sf libpetsc64.so.%{version} %{buildroot}%{_libdir}/libpetsc64.so.%{releasever}
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ln -sf libpetsc64.so.%{version} %{buildroot}%{_libdir}/libpetsc64.so.%{majorver}
install -pm 644 %{_arch}/include/*.h %{buildroot}%{_includedir}/%{name}64/
install -pm 644 %{_arch}/include/*.mod %{buildroot}%{_fmoddir}/%{name}64/
cp -a include/* %{buildroot}%{_includedir}/%{name}64/
cp -p %{_arch}/lib/pkgconfig/PETSc.pc %{buildroot}%{_libdir}/pkgconfig/PETSc64.pc
cp -p %{_arch}/lib/pkgconfig/PETSc.pc %{buildroot}%{_libdir}/pkgconfig/petsc64.pc
sed -e 's|${prefix}/lib|${prefix}/%{_lib}|g' -i %{buildroot}%{_libdir}/pkgconfig/PETSc64.pc
sed -e 's|${prefix}/lib|${prefix}/%{_lib}|g' -i %{buildroot}%{_libdir}/pkgconfig/petsc64.pc
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}%{_libdir}/%{name}64/conf/
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}%{_libdir}/%{name}64/conf/
install -pm 644 lib/petsc/conf/rules %{buildroot}%{_libdir}/%{name}64/conf/
install -pm 644 lib/petsc/conf/variables %{buildroot}%{_libdir}/%{name}64/conf/
sed -e 's|%{_builddir}/%{name}-%{version}/build64|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
sed -e 's|%{_builddir}/%{name}-%{version}/build64/%{_arch}/|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
sed -e 's|-I%{_prefix}/%{_arch}/include/|-I%{_includedir}/%{name}64 -I%{_fmoddir}/%{name}64|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
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sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/variables
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/rules
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscrules
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
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popd
%endif
%if %{with openmpi}
pushd buildopenmpi_dir
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%{_openmpi_load}
mkdir -p %{buildroot}$MPI_LIB %{buildroot}$MPI_INCLUDE/%{name}
mkdir -p %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}
mkdir -p %{buildroot}$MPI_LIB/%{name}/conf
install -pm 755 %{_arch}/lib/libpetsc.* %{buildroot}$MPI_LIB
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{releasever}
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ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{majorver}
install -pm 644 %{_arch}/include/*.h %{buildroot}$MPI_INCLUDE/%{name}/
install -pm 644 %{_arch}/include/*.mod %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}/
cp -a include/* %{buildroot}$MPI_INCLUDE/%{name}/
cp -a %{_arch}/lib/pkgconfig %{buildroot}$MPI_LIB/
sed -e 's|-I${includedir}/petsc|-I%{_includedir}/openmpi-%{_arch}/petsc|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|-L${libdir}|-L%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|ldflag_rpath=-L|ldflag_rpath=-L%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|-lpetsc|-lpetsc -lhdf5|' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|${prefix}/lib|${prefix}/%{_lib}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
ln -fs $MPI_LIB/pkgconfig/PETSc.pc %{buildroot}$MPI_LIB/pkgconfig/petsc.pc
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}$MPI_LIB/%{name}/conf/
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}$MPI_LIB/%{name}/conf/
install -pm 644 lib/petsc/conf/rules %{buildroot}$MPI_LIB/%{name}/conf/
install -pm 644 lib/petsc/conf/variables %{buildroot}$MPI_LIB/%{name}/conf/
sed -e 's|%{_builddir}/%{name}-%{version}/buildopenmpi_dir|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
sed -e 's|%{_builddir}/%{name}-%{version}/buildopenmpi_dir/%{_arch}/|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
sed -e 's|-I%{_prefix}/%{_arch}/include|-I%{_includedir}/openmpi-%{_arch}/%{name} -I%{_fmoddir}/openmpi/%{name}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
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sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/variables
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/rules
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sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscrules
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
%if %{with python}
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pushd src/binding/petsc4py
export PETSC_ARCH=%{_arch}
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export PETSC_DIR=../../../
%py3_install -- --verbose
unset PETSC_ARCH
unset PETSC_DIR
popd
# Install petsc4py files into MPI directories
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/openmpi
%endif
mkdir -p %{buildroot}$MPI_PYTHON3_SITEARCH
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name} %{buildroot}$MPI_PYTHON3_SITEARCH/
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info %{buildroot}$MPI_PYTHON3_SITEARCH/
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
chrpath -r %{_libdir}/openmpi/lib %{buildroot}$MPI_PYTHON3_SITEARCH/%{pymodule_name}/lib/%{_arch}/*.so
%endif
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%{_openmpi_unload}
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cd ..
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%endif
%if %{with mpich}
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cd buildmpich_dir
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%{_mpich_load}
mkdir -p %{buildroot}$MPI_LIB %{buildroot}$MPI_INCLUDE/%{name}
mkdir -p %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}
mkdir -p %{buildroot}$MPI_LIB/%{name}/conf
install -pm 755 %{_arch}/lib/libpetsc.* %{buildroot}$MPI_LIB
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{releasever}
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ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{majorver}
install -pm 644 %{_arch}/include/*.h %{buildroot}$MPI_INCLUDE/%{name}/
install -pm 644 %{_arch}/include/*.mod %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}/
cp -a include/* %{buildroot}$MPI_INCLUDE/%{name}/
cp -a %{_arch}/lib/pkgconfig %{buildroot}$MPI_LIB/
sed -e 's|-I${includedir}/petsc|-I%{_includedir}/mpich-%{_arch}/petsc|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|-L${libdir}|-L%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|ldflag_rpath=-L|ldflag_rpath=-L%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|-lpetsc|-lpetsc -lhdf5|' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
sed -e 's|${prefix}/lib|${prefix}/%{_lib}/mpich/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
ln -fs $MPI_LIB/pkgconfig/PETSc.pc %{buildroot}$MPI_LIB/pkgconfig/petsc.pc
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install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}$MPI_LIB/%{name}/conf/
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}$MPI_LIB/%{name}/conf/
install -pm 644 lib/petsc/conf/rules %{buildroot}$MPI_LIB/%{name}/conf/
install -pm 644 lib/petsc/conf/variables %{buildroot}$MPI_LIB/%{name}/conf/
sed -e 's|%{_builddir}/%{name}-%{version}/buildmpich_dir|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
sed -e 's|%{_builddir}/%{name}-%{version}/buildmpich_dir/%{_arch}/|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
sed -e 's|-I%{_prefix}/%{_arch}/include|-I%{_includedir}/mpich-%{_arch}/%{name} -I%{_fmoddir}/mpich/%{name}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
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sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/variables
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/rules
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sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscrules
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
%if %{with python}
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pushd src/binding/petsc4py
export PETSC_ARCH=%{_arch}
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export PETSC_DIR=../../../
%py3_install -- --verbose
unset PETSC_ARCH
unset PETSC_DIR
popd
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# Install petsc4py files into MPI directories
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/mpich
%endif
mkdir -p %{buildroot}$MPI_PYTHON3_SITEARCH
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name} %{buildroot}$MPI_PYTHON3_SITEARCH/
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info %{buildroot}$MPI_PYTHON3_SITEARCH/
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
chrpath -r %{_libdir}/mpich/lib %{buildroot}$MPI_PYTHON3_SITEARCH/%{pymodule_name}/lib/%{_arch}/*.so
%endif
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%{_mpich_unload}
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cd ..
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%endif
# Move html documentation in _pkgdocdir
pushd %{buildroot}%{_includedir}
mkdir -p %{buildroot}%{_pkgdocdir}/headers
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for i in `find . -name "*.h.html" -type f -print`; do
mv $i %{buildroot}%{_pkgdocdir}/headers
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done
for i in `find . -name "*.html" -type f -print`; do
mv $i %{buildroot}%{_pkgdocdir}/headers
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done
find . -name "Makefile" -type f -print | xargs /bin/rm -f
popd
cp -a %{name}-%{version}/docs/* %{buildroot}%{_pkgdocdir}
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#
%check
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%if %{with openmpi}
%{_openmpi_load}
%if %{with check}
export LD_LIBRARY_PATH=%{buildroot}$MPI_LIB
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export PETSC_DIR=%{_builddir}/%{name}-%{version}/buildopenmpi_dir
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export PETSC_ARCH=%{_arch}
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export MPI_INTERFACE_HOSTNAME=localhost
export OMPI_MCA_btl_base_warn_component_unused=0
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export wPETSC_DIR=./
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/buildopenmpi_dir/share/petsc/datafiles
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
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%if %{with debug}
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}"
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildopenmpi_dir V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/buildopenmpi_dir/lib/petsc/bin/petscmpiexec -valgrind'
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%else
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildopenmpi_dir V=1
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%endif
%endif
%if %{with python}
%if %{with pycheck}
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pushd buildopenmpi_dir/src/binding/petsc4py
export PETSC_ARCH=%{_arch}
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export PETSC_DIR=../../../
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/openmpi
%endif
export PYTHONPATH=%{buildroot}$MPI_PYTHON3_SITEARCH
export LD_LIBRARY_PATH=%{buildroot}$MPI_LIB
%{__python3} setup.py test
unset PETSC_ARCH
unset PETSC_DIR
popd
%endif
%endif
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%{_openmpi_unload}
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%endif
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%if %{with mpich}
%{_mpich_load}
%if %{with check}
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export LD_LIBRARY_PATH=%{_builddir}/%{name}-%{version}/buildmpich_dir/%{_arch}/lib
export PETSC_DIR=%{_builddir}/%{name}-%{version}/buildmpich_dir
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export PETSC_ARCH=%{_arch}
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export MPI_INTERFACE_HOSTNAME=localhost
export OMPI_MCA_btl_base_warn_component_unused=0
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export wPETSC_DIR=./
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/buildmpich_dir/share/petsc/datafiles
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
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%if %{with debug}
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}"
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildmpich_dir V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/buildmpich_dir/lib/petsc/bin/petscmpiexec -valgrind'
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%else
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildmpich_dir V=1
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%endif
%endif
%if %{with python}
%if %{with pycheck}
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pushd buildmpich_dir/src/binding/petsc4py
export PETSC_ARCH=%{_arch}
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export PETSC_DIR=../../../
%if 0%{?rhel}
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/mpich
%endif
export PYTHONPATH=%{buildroot}$MPI_PYTHON3_SITEARCH
export LD_LIBRARY_PATH=%{buildroot}$MPI_LIB
%{__python3} setup.py test
unset PETSC_ARCH
unset PETSC_DIR
popd
%endif
%endif
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%{_mpich_unload}
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%endif
%if %{with check}
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export LD_LIBRARY_PATH=%{_libdir}:%{_builddir}/%{name}-%{version}/%{name}-%{version}/%{_arch}/lib
export PETSC_DIR=%{_builddir}/%{name}-%{version}/%{name}-%{version}
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export PETSC_ARCH=%{_arch}
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export wPETSC_DIR=./
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/%{name}-%{version}/share/petsc/datafiles
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
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%if %{with debug}
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules"
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C %{name}-%{version} V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/%{name}-%{version}/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS -valgrind'
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%else
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C %{name}-%{version} V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/%{name}-%{version}/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS'
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%endif
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%if %{with arch64}
export LD_LIBRARY_PATH=%{_libdir}:%{_builddir}/%{name}-%{version}/build64/%{_arch}/lib
export PETSC_DIR=%{_builddir}/%{name}-%{version}/build64
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export PETSC_ARCH=%{_arch}
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export wPETSC_DIR=./
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/build64/share/petsc/datafiles
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RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
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## 'make test' needs to link against -lpetsc
## Crude fix:
ln -s %{_builddir}/%{name}-%{version}/build64/%{_arch}/lib/libpetsc64.so %{_builddir}/%{name}-%{version}/build64/%{_arch}/lib/libpetsc.so
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%if %{with debug}
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules"
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/build64/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS -valgrind'
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%else
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xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/build64/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS'
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%endif
%endif
%endif
%files
%license %{name}-%{version}/LICENSE
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%{_libdir}/libpetsc.so.3
%{_libdir}/libpetsc.so.%{releasever}
%{_libdir}/libpetsc.so.%{version}
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%files devel
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%{_libdir}/pkgconfig/PETSc.pc
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%{_libdir}/pkgconfig/petsc.pc
%{_libdir}/%{name}/
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%{_libdir}/libpetsc.so
%{_includedir}/%{name}/
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%{_fmoddir}/%{name}/
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%files doc
%license %{name}-%{version}/LICENSE
%{_pkgdocdir}/
%if %{with arch64}
%files -n petsc64
%license build64/LICENSE
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%{_libdir}/libpetsc64.so.3
%{_libdir}/libpetsc64.so.%{releasever}
%{_libdir}/libpetsc64.so.%{version}
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%files -n petsc64-devel
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%{_libdir}/pkgconfig/PETSc64.pc
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%{_libdir}/pkgconfig/petsc64.pc
%{_libdir}/%{name}64/
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%{_libdir}/libpetsc64.so
%{_includedir}/%{name}64/
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%{_fmoddir}/%{name}64/
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%endif
%if %{with openmpi}
%files openmpi
%license buildopenmpi_dir/LICENSE
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%{_libdir}/openmpi/lib/libpetsc.so.3
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%{_libdir}/openmpi/lib/libpetsc.so.%{releasever}
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%{_libdir}/openmpi/lib/libpetsc.so.%{version}
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%files openmpi-devel
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%{_libdir}/openmpi/lib/libpetsc.so
%{_libdir}/openmpi/lib/%{name}/
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%{_libdir}/openmpi/lib/pkgconfig/PETSc.pc
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%{_libdir}/openmpi/lib/pkgconfig/petsc.pc
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%{_includedir}/openmpi-%{_arch}/%{name}/
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%{_fmoddir}/openmpi/%{name}/
%if %{with python}
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%files -n python3-%{name}-openmpi
%{python3_sitearch}/openmpi/%{pymodule_name}/
%{python3_sitearch}/openmpi/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
%endif
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%endif
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%if %{with mpich}
%files mpich
%license buildmpich_dir/LICENSE
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%{_libdir}/mpich/lib/libpetsc.so.3
%{_libdir}/mpich/lib/libpetsc.so.%{releasever}
2021-09-12 13:11:54 +00:00
%{_libdir}/mpich/lib/libpetsc.so.%{version}
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%files mpich-devel
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%{_libdir}/mpich/lib/libpetsc.so
%{_libdir}/mpich/lib/%{name}/
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%{_libdir}/mpich/lib/pkgconfig/PETSc.pc
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%{_libdir}/mpich/lib/pkgconfig/petsc.pc
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%{_includedir}/mpich-%{_arch}/%{name}/
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%{_fmoddir}/mpich/%{name}/
%if %{with python}
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%files -n python3-%{name}-mpich
%{python3_sitearch}/mpich/%{pymodule_name}/
%{python3_sitearch}/mpich/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
%endif
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%endif
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%changelog
%autochangelog
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