33 lines
1.7 KiB
Diff
33 lines
1.7 KiB
Diff
diff -up openbabel-openbabel-2-4-1/test/testpdbformat.py.taberror openbabel-openbabel-2-4-1/test/testpdbformat.py
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--- openbabel-openbabel-2-4-1/test/testpdbformat.py.taberror 2016-10-10 17:56:17.000000000 +0200
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+++ openbabel-openbabel-2-4-1/test/testpdbformat.py 2019-03-04 11:09:24.786801658 +0100
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@@ -24,12 +24,12 @@ class TestPDBFormat(BaseTest):
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def testInsertionCodes(self):
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"""
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- Testing a PDB entry with insertion codes to distinguish residues
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- upon conversion to FASTA.
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+ Testing a PDB entry with insertion codes to distinguish residues
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+ upon conversion to FASTA.
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"""
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self.canFindExecutable("babel")
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- self.entryPDBwithInsertioncodes="""ATOM 406 N VAL L 29 58.041 17.797 48.254 1.00 0.00 N
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+ self.entryPDBwithInsertioncodes="""ATOM 406 N VAL L 29 58.041 17.797 48.254 1.00 0.00 N
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ATOM 407 CA VAL L 29 57.124 18.088 47.170 1.00 0.00 C
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ATOM 408 C VAL L 29 55.739 17.571 47.538 1.00 0.00 C
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ATOM 409 O VAL L 29 55.535 16.362 47.550 1.00 0.00 O
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@@ -100,9 +100,9 @@ ATOM 473 HE1 TYR L 32 48.512
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ATOM 474 HE2 TYR L 32 48.145 19.172 44.648 1.00 0.00 H
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ATOM 475 HH TYR L 32 46.462 17.658 44.280 1.00 0.00 H
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"""
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- output, error = run_exec(self.entryPDBwithInsertioncodes,
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- "babel -ipdb -ofasta")
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- self.assertEqual(output.rstrip().rsplit("\n",1)[1], "VSSSY")
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+ output, error = run_exec(self.entryPDBwithInsertioncodes,
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+ "babel -ipdb -ofasta")
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+ self.assertEqual(output.rstrip().rsplit("\n",1)[1], "VSSSY")
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if __name__ == "__main__":
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testsuite = []
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