175 lines
7.2 KiB
Diff
175 lines
7.2 KiB
Diff
diff -up openbabel-2.1.1/src/dlhandler_unix.cpp.gcc43 openbabel-2.1.1/src/dlhandler_unix.cpp
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--- openbabel-2.1.1/src/dlhandler_unix.cpp.gcc43 2007-04-14 02:34:11.000000000 +0200
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+++ openbabel-2.1.1/src/dlhandler_unix.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -25,6 +25,7 @@ GNU General Public License for more deta
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#include <sys/stat.h>
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#include <dlfcn.h>
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#include <cstdlib>
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+#include <cstring>
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using namespace std;
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diff -up openbabel-2.1.1/src/zipstreamimpl.h.gcc43 openbabel-2.1.1/src/zipstreamimpl.h
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--- openbabel-2.1.1/src/zipstreamimpl.h.gcc43 2006-12-28 16:19:05.000000000 +0100
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+++ openbabel-2.1.1/src/zipstreamimpl.h 2008-01-07 23:15:46.000000000 +0100
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@@ -31,6 +31,8 @@ Altered by: Geoffrey Hutchison 2005 for
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minor namespace modifications, VC++ compatibility
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*/
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+#include <string.h>
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+
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//*****************************************************************************
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// template class basic_zip_streambuf
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//*****************************************************************************
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diff -up openbabel-2.1.1/src/residue.cpp.gcc43 openbabel-2.1.1/src/residue.cpp
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--- openbabel-2.1.1/src/residue.cpp.gcc43 2007-01-05 17:29:49.000000000 +0100
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+++ openbabel-2.1.1/src/residue.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -26,6 +26,8 @@ obtained in part or whole from RasMol2 b
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// File Includes
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///////////////////////////////////////////////////////////////////////////////
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+#include <cstring>
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+
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#include <openbabel/babelconfig.h>
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#include <openbabel/residue.h>
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diff -up openbabel-2.1.1/src/tokenst.cpp.gcc43 openbabel-2.1.1/src/tokenst.cpp
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--- openbabel-2.1.1/src/tokenst.cpp.gcc43 2006-12-28 16:21:51.000000000 +0100
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+++ openbabel-2.1.1/src/tokenst.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -25,7 +25,7 @@ GNU General Public License for more deta
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#include <algorithm>
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#include <vector>
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#include <string>
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-
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+#include <cstring>
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using namespace std;
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diff -up openbabel-2.1.1/src/obconversion.cpp.gcc43 openbabel-2.1.1/src/obconversion.cpp
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--- openbabel-2.1.1/src/obconversion.cpp.gcc43 2007-07-01 21:16:17.000000000 +0200
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+++ openbabel-2.1.1/src/obconversion.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -37,6 +37,7 @@ GNU General Public License for more deta
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#include <sstream>
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#include <string>
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#include <map>
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+#include <typeinfo>
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#include <openbabel/obconversion.h>
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diff -up openbabel-2.1.1/src/formats/rxnformat.cpp.gcc43 openbabel-2.1.1/src/formats/rxnformat.cpp
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--- openbabel-2.1.1/src/formats/rxnformat.cpp.gcc43 2007-03-12 15:23:38.000000000 +0100
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+++ openbabel-2.1.1/src/formats/rxnformat.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -18,6 +18,8 @@ GNU General Public License for more deta
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#pragma warning (disable : 4251) //
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#endif
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+#include <typeinfo>
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+
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#include <openbabel/babelconfig.h>
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#include <openbabel/mol.h>
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diff -up openbabel-2.1.1/src/formats/fchkformat.cpp.gcc43 openbabel-2.1.1/src/formats/fchkformat.cpp
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--- openbabel-2.1.1/src/formats/fchkformat.cpp.gcc43 2007-03-12 18:42:23.000000000 +0100
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+++ openbabel-2.1.1/src/formats/fchkformat.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -12,6 +12,7 @@ GNU General Public License for more deta
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***********************************************************************/
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#include <numeric>
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+#include <typeinfo>
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// No diagnoalization yet. Perhaps for 2.2 -GRH
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// #include <eigen/matrix.h>
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diff -up openbabel-2.1.1/src/fingerprint.cpp.gcc43 openbabel-2.1.1/src/fingerprint.cpp
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--- openbabel-2.1.1/src/fingerprint.cpp.gcc43 2007-06-02 15:56:31.000000000 +0200
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+++ openbabel-2.1.1/src/fingerprint.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -21,7 +21,7 @@ GNU General Public License for more deta
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#include <vector>
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#include <algorithm>
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#include <iosfwd>
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-#include <vector>
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+#include <cstring>
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#include <fstream>
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#include <openbabel/fingerprint.h>
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diff -up openbabel-2.1.1/scripts/perl/openbabel_perl.cpp.gcc43 openbabel-2.1.1/scripts/perl/openbabel_perl.cpp
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--- openbabel-2.1.1/scripts/perl/openbabel_perl.cpp.gcc43 2007-07-01 22:14:02.000000000 +0200
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+++ openbabel-2.1.1/scripts/perl/openbabel_perl.cpp 2008-01-07 23:30:21.000000000 +0100
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@@ -812,6 +812,8 @@ extern "C" {
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/* -----------------------------------------------------------------------------
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* error manipulation
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* ----------------------------------------------------------------------------- */
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+SWIGINTERN const char*
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+SWIG_Perl_ErrorType(int code) __attribute__((noinline));
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SWIGINTERN const char*
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SWIG_Perl_ErrorType(int code) {
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diff -up openbabel-2.1.1/include/openbabel/xml.h.gcc43 openbabel-2.1.1/include/openbabel/xml.h
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--- openbabel-2.1.1/include/openbabel/xml.h.gcc43 2007-02-26 17:28:03.000000000 +0100
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+++ openbabel-2.1.1/include/openbabel/xml.h 2008-01-07 23:15:46.000000000 +0100
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@@ -13,6 +13,8 @@ MERCHANTABILITY or FITNESS FOR A PARTICU
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GNU General Public License for more details.
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***********************************************************************/
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+#include <typeinfo>
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+
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#include <openbabel/mol.h>
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#include <openbabel/obconversion.h>
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#include <openbabel/obmolecformat.h>
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diff -up openbabel-2.1.1/include/openbabel/obconversion.h.gcc43 openbabel-2.1.1/include/openbabel/obconversion.h
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--- openbabel-2.1.1/include/openbabel/obconversion.h.gcc43 2007-06-02 15:56:37.000000000 +0200
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+++ openbabel-2.1.1/include/openbabel/obconversion.h 2008-01-07 23:15:46.000000000 +0100
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@@ -28,6 +28,7 @@ GNU General Public License for more deta
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#include <string>
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#include <vector>
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#include <map>
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+#include <strings.h>
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#include <openbabel/dlhandler.h>
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#include <openbabel/oberror.h>
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diff -up openbabel-2.1.1/include/openbabel/data.h.gcc43 openbabel-2.1.1/include/openbabel/data.h
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--- openbabel-2.1.1/include/openbabel/data.h.gcc43 2007-04-14 02:34:14.000000000 +0200
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+++ openbabel-2.1.1/include/openbabel/data.h 2008-01-07 23:15:46.000000000 +0100
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@@ -23,7 +23,7 @@ GNU General Public License for more deta
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#include <openbabel/babelconfig.h>
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#include <stdio.h>
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-
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+#include <cstring>
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#include <fstream>
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#include <vector>
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#include <string>
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diff -up openbabel-2.1.1/include/openbabel/obmolecformat.h.gcc43 openbabel-2.1.1/include/openbabel/obmolecformat.h
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--- openbabel-2.1.1/include/openbabel/obmolecformat.h.gcc43 2007-02-26 17:46:15.000000000 +0100
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+++ openbabel-2.1.1/include/openbabel/obmolecformat.h 2008-01-07 23:15:46.000000000 +0100
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@@ -23,6 +23,8 @@ GNU General Public License for more deta
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#include <hash_map>
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#endif
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+#include <typeinfo>
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+
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#include <openbabel/mol.h>
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#include <openbabel/obconversion.h>
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diff -up openbabel-2.1.1/include/openbabel/lineend.h.gcc43 openbabel-2.1.1/include/openbabel/lineend.h
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--- openbabel-2.1.1/include/openbabel/lineend.h.gcc43 2007-06-02 15:56:39.000000000 +0200
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+++ openbabel-2.1.1/include/openbabel/lineend.h 2008-01-07 23:15:46.000000000 +0100
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@@ -21,6 +21,7 @@ General Public License for more details.
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#define OB_LINEEND_H
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#include <streambuf>
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+#include <climits>
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#ifndef OBCONV
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#define OBCONV
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diff -up openbabel-2.1.1/tools/babel.cpp.gcc43 openbabel-2.1.1/tools/babel.cpp
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--- openbabel-2.1.1/tools/babel.cpp.gcc43 2007-07-07 08:35:54.000000000 +0200
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+++ openbabel-2.1.1/tools/babel.cpp 2008-01-07 23:15:46.000000000 +0100
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@@ -35,6 +35,7 @@ GNU General Public License for more deta
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#include <conio.h>
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#endif
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#include <cstdlib>
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+#include <cstring>
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#if !HAVE_STRNCASECMP
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extern "C" int strncasecmp(const char *s1, const char *s2, size_t n);
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