diff -up openbabel-openbabel-2-4-1/test/testpdbformat.py.taberror openbabel-openbabel-2-4-1/test/testpdbformat.py --- openbabel-openbabel-2-4-1/test/testpdbformat.py.taberror 2016-10-10 17:56:17.000000000 +0200 +++ openbabel-openbabel-2-4-1/test/testpdbformat.py 2019-03-04 11:09:24.786801658 +0100 @@ -24,12 +24,12 @@ class TestPDBFormat(BaseTest): def testInsertionCodes(self): """ - Testing a PDB entry with insertion codes to distinguish residues - upon conversion to FASTA. + Testing a PDB entry with insertion codes to distinguish residues + upon conversion to FASTA. """ self.canFindExecutable("babel") - self.entryPDBwithInsertioncodes="""ATOM 406 N VAL L 29 58.041 17.797 48.254 1.00 0.00 N + self.entryPDBwithInsertioncodes="""ATOM 406 N VAL L 29 58.041 17.797 48.254 1.00 0.00 N ATOM 407 CA VAL L 29 57.124 18.088 47.170 1.00 0.00 C ATOM 408 C VAL L 29 55.739 17.571 47.538 1.00 0.00 C ATOM 409 O VAL L 29 55.535 16.362 47.550 1.00 0.00 O @@ -100,9 +100,9 @@ ATOM 473 HE1 TYR L 32 48.512 ATOM 474 HE2 TYR L 32 48.145 19.172 44.648 1.00 0.00 H ATOM 475 HH TYR L 32 46.462 17.658 44.280 1.00 0.00 H """ - output, error = run_exec(self.entryPDBwithInsertioncodes, - "babel -ipdb -ofasta") - self.assertEqual(output.rstrip().rsplit("\n",1)[1], "VSSSY") + output, error = run_exec(self.entryPDBwithInsertioncodes, + "babel -ipdb -ofasta") + self.assertEqual(output.rstrip().rsplit("\n",1)[1], "VSSSY") if __name__ == "__main__": testsuite = []