Use CMake3 in EPEL7| Fix PPC64le builds (rhbz#1996330)
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@ -6,24 +6,27 @@
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# we don't want to provide private Perl or Python extension libs
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%global __provides_exclude_from ^(%{perl_vendorarch}/auto|%{python3_sitearch})/.*\\.so$
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%global __cmake_in_source_build 1
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Name: openbabel
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Version: 2.4.1
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Release: 37%{?dist}
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Release: 38%{?dist}
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Summary: Chemistry software file format converter
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License: GPLv2
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URL: https://openbabel.org/
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Source0: https://github.com/openbabel/openbabel/archive/openbabel-%(echo %{version} | tr '.' '-').tar.gz
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Source1: obgui.desktop
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# fix perl modules install path
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Patch1: %{name}-perl.patch
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Patch1: openbabel-perl.patch
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# fix plugin directory location (#680292, patch by lg)
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Patch4: openbabel-plugindir.patch
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# fix SWIG_init even when not using swig (#772149)
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Patch6: openbabel-noswig-rubymethod.patch
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# On F-17, directory for C ruby files changed to use vendorarch directory
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Patch7: openbabel-ruby19-vendorarch.patch
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# temporarily disable some tests on:
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# - ppc64 and s390(x) to unblock other builds (#1108103)
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# - ARM (#1094491)
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@ -31,18 +34,23 @@ Patch7: openbabel-ruby19-vendorarch.patch
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# Upstream bugs: https://sourceforge.net/p/openbabel/bugs/927/ https://sourceforge.net/p/openbabel/bugs/945/
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Patch8: openbabel-disable-tests.patch
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Patch9: openbabel-narrowing-conversion.patch
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# Fix path to libdir in .pc file
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# https://bugzilla.redhat.com/show_bug.cgi?id=1669664
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Patch10: openbabel-fix-libdir-in-pkgconfig.patch
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# Math 4 test is failing on s390x only
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Patch11: openbabel-disable-tests-s390x.patch
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# Fix inconsistent whitespace
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Patch12: openbabel-taberror.patch
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# Fix import of dl module in python3.7
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# https://github.com/openbabel/openbabel/pull/372
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Patch13: openbabel-python-dl.patch
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BuildRequires: make
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BuildRequires: cmake
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BuildRequires: cmake3
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BuildRequires: dos2unix
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BuildRequires: desktop-file-utils
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BuildRequires: eigen3-devel
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@ -162,6 +170,8 @@ dos2unix -k \
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convert src/GUI/babel.xpm -transparent white babel.png
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cp -p %{SOURCE1} obgui.desktop
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# Remove duplicate html files
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pushd doc
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for man in *.1; do
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@ -173,7 +183,15 @@ done
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popd
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%build
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%cmake \
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mkdir -p %{_target_platform}
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%if 0%{?fedora} || 0%{?eln}
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# RHBZ #1996330
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%ifarch %{power64}
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export CXXFLAGS="%{optflags} -DEIGEN_ALTIVEC_DISABLE_MMA"
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%endif
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%endif
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%cmake3 -B %{_target_platform} \
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-Wno-dev \
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-DCMAKE_SKIP_RPATH:BOOL=ON \
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-DBUILD_GUI:BOOL=ON \
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-DPYTHON_BINDINGS:BOOL=ON \
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@ -185,26 +203,45 @@ popd
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-DRUN_SWIG=true \
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-DENABLE_TESTS:BOOL=ON \
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-DOPTIMIZE_NATIVE=OFF
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%cmake_build
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%make_build -C %{_target_platform}
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%install
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%cmake_install
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%make_install -C %{_target_platform}
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rm %{buildroot}%{_libdir}/cmake/openbabel2/*.cmake
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rm -f %{buildroot}%{_libdir}/cmake/openbabel2/*.cmake
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desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{SOURCE1}
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desktop-file-install --dir=%{buildroot}%{_datadir}/applications obgui.desktop
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install -Dpm644 babel.png %{buildroot}%{_datadir}/pixmaps/babel.png
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%if 1
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%check
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# rm the built ruby bindings for testsuite to succeed (bug #1191173)
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rm %{_lib}/openbabel.so
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export CTEST_OUTPUT_ON_FAILURE=1 PYTHONPATH=%{buildroot}%{python3_sitearch}
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%make_build test
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%define _vpath_builddir %{_target_platform}
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pushd %{_vpath_builddir}
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# rm the built ruby bindings for testsuite to succeed (Red Hat bugzilla ticket #1191173)
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rm -f %{_lib}/openbabel.so
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# needed by openbabel python module
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cp -p %{_lib}/_openbabel.so ../scripts/python/
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export CTEST_OUTPUT_ON_FAILURE=1
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export PYTHONPATH=%{buildroot}%{python3_sitearch}
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export LD_LIBRARY_PATH=%{buildroot}%{libdir}:%{buildroot}%{libdir}/openbabel:%{buildroot}%{perl_vendorarch}/*/Chemistry/OpenBabel:%{buildroot}%{ruby_vendorarchdir}
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%if 0%{?el7}
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ctest3 -j1 --force-new-ctest-process -E 'test_cifspacegroup_1|test_cifspacegroup_2'
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%else
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# See https://github.com/openbabel/openbabel/issues/2138
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%ifarch aarch64 %{arm} %{power64} s390x
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ctest3 -j1 --force-new-ctest-process -E 'pybindtest_bindings|pybindtest_obconv_writers'
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%else
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ctest3 -j1 --force-new-ctest-process
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%endif
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%endif
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%endif
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%if 0%{?el7}
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%ldconfig_scriptlets libs
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%endif
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%files
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%{_bindir}/babel
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@ -248,6 +285,10 @@ export CTEST_OUTPUT_ON_FAILURE=1 PYTHONPATH=%{buildroot}%{python3_sitearch}
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%{ruby_vendorarchdir}/openbabel.so
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%changelog
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* Wed Sep 01 2021 Antonio Trande <sagitter@fedoraproject.org> - 2.4.1-38
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- Use CMake3 in EPEL7
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- Fix PPC64le builds (rhbz#1996330)
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* Thu Jul 22 2021 Fedora Release Engineering <releng@fedoraproject.org> - 2.4.1-37
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
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