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13 changed files with 261 additions and 867 deletions

8
.gitignore vendored
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@ -24,11 +24,3 @@ octave-3.2.4.tar.bz2
/octave-4.0.1.tar.xz
/octave-4.0.2.tar.xz
/octave-4.0.3.tar.xz
/octave-4.2.0-rc1.tar.xz
/octave-4.2.0.tar.lz
/octave-4.2.1.tar.lz
/octave-4.2.2.tar.lz
/octave-4.4.1.tar.lz
/octave-4.4.1-docs.tar.gz
/octave-5.1.0.tar.lz
/octave-5.1.0-docs.tar.lz

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@ -13,27 +13,8 @@
# Run an octave command - quietly with no startup files
%octave_cmd() octave -H -q --no-window-system --no-site-file --eval '%*';
# For compiled tarfile name
%octave_host %(octave-config -p CANONICAL_HOST_TYPE || echo 0)
# Build unpacked source directory into a package tar file in a temporary location
# Pass -T to use source tarball
%octave_pkg_build(T) %{lua:
if (rpm.expand("%{-T}") == "-T") then
octpkg_tarfile = rpm.expand("%{SOURCE0}")
else
octpkg_tarfile = rpm .expand("%{_tmppath}/%{octpkg}-%{version}.tar.gz")
print("tar czf "..octpkg_tarfile.." -C "..rpm.expand("%{_builddir} %{buildsubdir}").."\\n")
end
-- Avoid a warning from pkg build about making the build directory
-- and use a clean directory as octave pkg build will delete contents
print(rpm.expand("mkdir -p %{_builddir}/%{buildsubdir}/build\\n"))
-- This fails to keep the arguments to %octave_cmd for some reason
-- print(rpm.expand("%octave_cmd pkg build -verbose -nodeps %{_builddir}/%{buildsubdir} "..octpkg_tarfile).."\\n")
print(rpm.expand("octave -H -q --no-window-system --no-site-file --eval 'pkg build -verbose -nodeps %{_builddir}/%{buildsubdir}/build "..octpkg_tarfile).."'\\n")
-- Extract the source tarball for debuginfo generation
print(rpm.expand("tar xf "..octpkg_tarfile.." -C %{_builddir}/%{buildsubdir}/build\\n"))
}
%octave_pkg_build %octave_cmd pkg build "-verbose" "-nodeps" %{_tmppath}/%{name}-%{version}-%{release}.%{_arch} %{_builddir}/%{buildsubdir}
# Install a package. We use the octave pkg install command to install the
# built package into the buildroot. We also put a note to prevent the root
@ -43,31 +24,20 @@
%octave_pkg_install \
mkdir -p %{buildroot}%{octprefix} \
mkdir -p %{buildroot}%{octarchprefix} \
%octave_cmd pkg("prefix","%{buildroot}%{octprefix}","%{buildroot}%{octarchprefix}");pkg("global_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("local_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("install","-nodeps","-verbose",glob("%{_builddir}/%{buildsubdir}/build/%{octpkg}-%{version}-*.tar.gz"){1,1});unlink(pkg("local_list"));unlink(pkg("global_list")); \
%octave_cmd pkg("prefix","%{buildroot}%{octprefix}","%{buildroot}%{octarchprefix}");pkg("global_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("local_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("install","-nodeps","-verbose","%{_tmppath}/%{name}-%{version}-%{release}.%{_arch}/%{octpkg}-%{version}.tar.gz");unlink(pkg("local_list"));unlink(pkg("global_list")); \
if [ -e %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m ] \
then \
mv %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m.orig \
mv %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m.orig \
fi \
echo "function on_uninstall (desc)" > %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m \
echo " error ('Can not uninstall %s installed by the redhat package manager', desc.name);" >> %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m \
echo "endfunction" >> %{buildroot}%{octpkgdir}/packinfo/on_uninstall.m \
if [ -e %{_builddir}/%{buildsubdir}/build/%{octpkg}-%{version}/*.metainfo.xml ] \
then \
echo "Found .metainfo.xml appdata file" \
mkdir -p %{buildroot}/%{_metainfodir} \
cp -p %{_builddir}/%{buildsubdir}/build/%{octpkg}-%{version}/*.metainfo.xml %{buildroot}/%{_metainfodir}/ \
appstream-util validate-relax --nonet %{buildroot}/%{_metainfodir}/*.metainfo.xml \
else \
echo "Did not find a .metainfo.xml appdata file" \
fi \
%{nil}
# Run pkg tests - We need to reinstall to recreate 'octave_packages' so that
# octave can find the package, then remove 'octave_packages' again, and re-strip
# any shared objects.
# octave can find the package, then remove 'octave_packages' again.
%octave_pkg_check \
%octave_cmd pkg("prefix","%{buildroot}%{octprefix}","%{buildroot}%{octarchprefix}");pkg("local_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("list");pkg("install","-verbose",glob("%{_builddir}/%{buildsubdir}/build/%{octpkg}-%{version}-*.tar.gz"){1,1});pkg("load","%{octpkg}");pkg("list");runtests("%{buildroot}%{octpkgdir}");unlink(pkg("local_list")); \
/usr/lib/rpm/brp-strip-shared %{__strip} \
%octave_cmd pkg("prefix","%{buildroot}%{octprefix}","%{buildroot}%{octarchprefix}");pkg("global_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("local_list",fullfile("%{buildroot}%{octshareprefix}","octave_packages"));pkg("install","-nodeps","-verbose","%{_tmppath}/%{name}-%{version}-%{release}.%{_arch}/%{octpkg}-%{version}.tar.gz");pkg("load","%{octpkg}");runtests("%{buildroot}%{octpkgdir}");unlink(pkg("local_list"));unlink(pkg("global_list")); \
%{nil}
# preun script - we need to remove our uninstall protection and perhaps

27
octave-abs.patch Normal file
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@ -0,0 +1,27 @@
diff -up octave-4.0.0/libinterp/corefcn/pr-output.cc.abs octave-4.0.0/libinterp/corefcn/pr-output.cc
--- octave-4.0.0/libinterp/corefcn/pr-output.cc.abs 2015-05-23 08:21:53.000000000 -0600
+++ octave-4.0.0/libinterp/corefcn/pr-output.cc 2016-02-21 08:59:30.966291273 -0700
@@ -21,7 +21,7 @@ along with Octave; see the file COPYING.
*/
#ifdef HAVE_CONFIG_H
-#include <config.h>
+#include "config.h"
#endif
#include <cfloat>
@@ -3145,6 +3145,14 @@ PRINT_INT_SCALAR_INTERNAL (uint32_t)
PRINT_INT_SCALAR_INTERNAL (int64_t)
PRINT_INT_SCALAR_INTERNAL (uint64_t)
+inline unsigned int abs (unsigned int x) { return x; }
+inline long unsigned int abs (long unsigned int x) { return x; }
+inline long long unsigned int abs (long long unsigned int x) { return x; }
+inline short unsigned int abs (short unsigned int x) { return x; }
+inline unsigned char abs (unsigned char x) { return x; }
+inline signed char abs (signed char x) { return abs((int)x); }
+inline short int abs (short int x) { return abs((int)x); }
+
template <class T>
/* static */ inline void
octave_print_internal_template (std::ostream& os, const intNDArray<T>& nda,

9
octave-appdata.patch Normal file
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@ -0,0 +1,9 @@
diff -up octave-4.0.0/etc/icons/octave.appdata.xml.in.appdata octave-4.0.0/etc/icons/octave.appdata.xml.in
--- octave-4.0.0/etc/icons/octave.appdata.xml.in.appdata 2015-05-23 08:21:53.000000000 -0600
+++ octave-4.0.0/etc/icons/octave.appdata.xml.in 2015-12-30 16:19:24.324969806 -0700
@@ -52,5 +52,4 @@
</screenshots>
<url type="homepage">http://www.octave.org</url>
<updatecontact>maintainers@octave.org</updatecontact>
- <project_group>GNU</project_group>
</application>

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@ -1,12 +0,0 @@
diff -up octave-4.4.1/libinterp/corefcn/input.cc.crash octave-4.4.1/libinterp/corefcn/input.cc
--- octave-4.4.1/libinterp/corefcn/input.cc.crash 2018-11-11 17:27:39.588037444 -0700
+++ octave-4.4.1/libinterp/corefcn/input.cc 2018-11-11 17:30:42.344208272 -0700
@@ -255,7 +255,7 @@ namespace octave
octave_diary << retval;
- if (retval.back () != '\n')
+ if (!retval.empty () && retval.back () != '\n')
octave_diary << "\n";
}
else

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@ -1,28 +0,0 @@
# HG changeset patch
# User Mike Miller <mtmiller@octave.org>
# Date 1554238576 25200
# Node ID c3716220d5b93c49e1c7cc8ebe0b76dd961f4ec7
# Parent fc73dafece570f201c18a4eb4a8729a654cfcfbb
fix pause and kbhit with glibc 2.28 end-of-file state behavior (bug #55029)
* sysdep.cc (octave::kbhit): Call "clearerr (stdin)" on end-of-file condition
in addition to "std::cin.clear ()". In glibc 2.28, end-of-file is persistent
and must be cleared by the application.
diff --git a/libinterp/corefcn/sysdep.cc b/libinterp/corefcn/sysdep.cc
--- a/libinterp/corefcn/sysdep.cc
+++ b/libinterp/corefcn/sysdep.cc
@@ -566,7 +566,10 @@
int c = std::cin.get ();
if (std::cin.fail () || std::cin.eof ())
- std::cin.clear ();
+ {
+ std::cin.clear ();
+ clearerr (stdin);
+ }
// Restore it, enabling system call restarts (if possible).
octave::set_interrupt_handler (saved_interrupt_handler, true);

11
octave-gnulib.patch Normal file
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@ -0,0 +1,11 @@
diff -up octave-4.0.0/liboctave/cruft/Faddeeva/Faddeeva.hh.gnulib octave-4.0.0/liboctave/cruft/Faddeeva/Faddeeva.hh
--- octave-4.0.0/liboctave/cruft/Faddeeva/Faddeeva.hh.gnulib 2015-05-23 08:21:53.000000000 -0600
+++ octave-4.0.0/liboctave/cruft/Faddeeva/Faddeeva.hh 2016-02-19 19:50:04.693811663 -0700
@@ -27,6 +27,7 @@
#ifndef FADDEEVA_HH
#define FADDEEVA_HH 1
+#include <math.h>
#include <complex>
namespace Faddeeva {

41
octave-pkgbuilddir.patch Normal file
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@ -0,0 +1,41 @@
diff -up octave-4.0.0-rc1/scripts/pkg/private/install.m.pkgbuilddir octave-4.0.0-rc1/scripts/pkg/private/install.m
--- octave-4.0.0-rc1/scripts/pkg/private/install.m.pkgbuilddir 2015-03-05 08:13:28.000000000 -0700
+++ octave-4.0.0-rc1/scripts/pkg/private/install.m 2015-03-05 20:43:45.762854275 -0700
@@ -62,7 +62,10 @@ function install (files, handle_deps, au
for i = 1:length (files)
tgz = files{i};
- if (exist (tgz, "file"))
+ ## The filename pointed to an uncompressed package to begin with.
+ if (exist (tgz, "dir"))
+ dirlist = {".", "..", tgz};
+ elseif (exist (tgz, "file"))
## Create a temporary directory.
tmpdir = tempname ();
tmpdirs{end+1} = tmpdir;
@@ -91,17 +94,16 @@ function install (files, handle_deps, au
endif
endif
- ## The filename pointed to an uncompressed package to begin with.
- if (exist (tgz, "dir"))
- dirlist = {".", "..", tgz};
- endif
-
- if (exist (tgz, "file") || exist (tgz, "dir"))
+ if (exist (tgz, "file"))
## The two first entries of dirlist are "." and "..".
- if (exist (tgz, "file"))
- packdir = fullfile (tmpdir, dirlist{3});
+ if (exist (tgz, "dir"))
+ if (tgz(1) == '/')
+ packdir = tgz;
+ else
+ packdir = fullfile (pwd (), dirlist{3});
+ endif
else
- packdir = fullfile (pwd (), dirlist{3});
+ packdir = fullfile (tmpdir, dirlist{3});
endif
packdirs{end+1} = packdir;

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@ -1,504 +0,0 @@
diff -up octave-5.0.91/configure.ac.sundials3 octave-5.0.91/configure.ac
--- octave-5.0.91/configure.ac.sundials3 2019-02-04 10:50:20.000000000 -0700
+++ octave-5.0.91/configure.ac 2019-02-05 22:05:44.096260529 -0700
@@ -2220,15 +2220,15 @@ OCTAVE_CHECK_LIB(sundials_ida, [SUNDIALS
[], [don't use SUNDIALS IDA library, solvers ode15i and ode15s will be disabled],
[warn_sundials_ida=
OCTAVE_CHECK_SUNDIALS_SIZEOF_REALTYPE
- OCTAVE_CHECK_SUNDIALS_IDA_DENSE
- OCTAVE_CHECK_SUNDIALS_IDAKLU])
+ OCTAVE_CHECK_SUNDIALS_SUNLINSOL_DENSE
+ OCTAVE_CHECK_SUNDIALS_SUNLINSOL_KLU])
LIBS="$save_LIBS"
dnl Define this way instead of with an #if in oct-conf-post.h so that
dnl the build features script will get the correct value.
if test -n "$SUNDIALS_IDA_LIBS" \
&& test -n "$SUNDIALS_NVECSERIAL_LIBS" \
- && test $octave_cv_sundials_ida_dense = yes \
+ && test $octave_cv_sundials_sunlinsol_dense = yes \
&& test $octave_cv_sundials_realtype_is_double = yes; then
AC_DEFINE(HAVE_SUNDIALS, 1, [Define to 1 if SUNDIALS is available.])
fi
diff -up octave-5.0.91/libinterp/dldfcn/__ode15__.cc.sundials3 octave-5.0.91/libinterp/dldfcn/__ode15__.cc
--- octave-5.0.91/libinterp/dldfcn/__ode15__.cc.sundials3 2019-02-04 10:50:20.000000000 -0700
+++ octave-5.0.91/libinterp/dldfcn/__ode15__.cc 2019-02-05 22:06:48.074012827 -0700
@@ -1,6 +1,7 @@
/*
Copyright (C) 2016-2019 Francesco Faccio <francesco.faccio@mail.polimi.it>
+Copyright (C) 2018 William Greene <w.h.greene@gmail.com>
This file is part of Octave.
@@ -44,15 +45,34 @@ along with Octave; see the file COPYING.
# include <ida/ida.h>
# endif
-# if defined (HAVE_IDA_IDA_DENSE_H)
-# include <ida/ida_dense.h>
+# if defined (HAVE_SUNDIALS_SUNDIALS_MATRIX_H)
+# include <sundials/sundials_matrix.h>
# endif
-# if defined (HAVE_IDA_IDA_KLU_H)
-# include <ida/ida_klu.h>
+# if defined (HAVE_SUNDIALS_SUNDIALS_LINEARSOLVER_H)
+# include <sundials/sundials_linearsolver.h>
+# endif
+
+# if defined (HAVE_SUNLINSOL_SUNLINSOL_DENSE_H)
+# include <sunlinsol/sunlinsol_dense.h>
+# endif
+
+# if defined (HAVE_IDA_IDA_DIRECT_H)
+# include <ida/ida_direct.h>
+# endif
+
+# if defined (HAVE_SUNDIALS_SUNDIALS_SPARSE_H)
# include <sundials/sundials_sparse.h>
# endif
+# if defined (HAVE_SUNLINSOL_SUNLINSOL_KLU_H)
+# include <sunlinsol/sunlinsol_klu.h>
+# endif
+
+# if defined (HAVE_SUNMATRIX_SUNMATRIX_SPARSE_H)
+# include <sunmatrix/sunmatrix_sparse.h>
+# endif
+
# if defined (HAVE_NVECTOR_NVECTOR_SERIAL_H)
# include <nvector/nvector_serial.h>
# endif
@@ -112,7 +132,8 @@ namespace octave
havejacsparse (false), mem (nullptr), num (), ida_fun (nullptr),
ida_jac (nullptr), dfdy (nullptr), dfdyp (nullptr), spdfdy (nullptr),
spdfdyp (nullptr), fun (nullptr), jacfun (nullptr), jacspfun (nullptr),
- jacdcell (nullptr), jacspcell (nullptr)
+ jacdcell (nullptr), jacspcell (nullptr),
+ sunJacMatrix (nullptr), sunLinearSolver (nullptr)
{ }
@@ -122,11 +143,17 @@ namespace octave
havejacsparse (false), mem (nullptr), num (), ida_fun (ida_fcn),
ida_jac (nullptr), dfdy (nullptr), dfdyp (nullptr), spdfdy (nullptr),
spdfdyp (nullptr), fun (daefun), jacfun (nullptr), jacspfun (nullptr),
- jacdcell (nullptr), jacspcell (nullptr)
+ jacdcell (nullptr), jacspcell (nullptr),
+ sunJacMatrix (nullptr), sunLinearSolver (nullptr)
{ }
- ~IDA (void) { IDAFree (&mem); }
+ ~IDA (void)
+ {
+ IDAFree (&mem);
+ SUNLinSolFree(sunLinearSolver);
+ SUNMatDestroy(sunJacMatrix);
+ }
IDA&
set_jacobian (octave_function *jac, DAEJacFuncDense j)
@@ -184,7 +211,7 @@ namespace octave
static N_Vector ColToNVec (const ColumnVector& data, long int n);
void
- set_up (void);
+ set_up (const ColumnVector& y);
void
set_tolerance (ColumnVector& abstol, realtype reltol);
@@ -199,25 +226,24 @@ namespace octave
void
resfun_impl (realtype t, N_Vector& yy,
N_Vector& yyp, N_Vector& rr);
-
static int
- jacdense (long int Neq, realtype t, realtype cj, N_Vector yy,
- N_Vector yyp, N_Vector, DlsMat JJ, void *user_data,
+ jacdense (realtype t, realtype cj, N_Vector yy,
+ N_Vector yyp, N_Vector, SUNMatrix JJ, void *user_data,
N_Vector, N_Vector, N_Vector)
{
IDA *self = static_cast <IDA *> (user_data);
- self->jacdense_impl (Neq, t, cj, yy, yyp, JJ);
+ self->jacdense_impl (t, cj, yy, yyp, JJ);
return 0;
}
void
- jacdense_impl (long int Neq, realtype t, realtype cj,
- N_Vector& yy, N_Vector& yyp, DlsMat& JJ);
+ jacdense_impl (realtype t, realtype cj,
+ N_Vector& yy, N_Vector& yyp, SUNMatrix& JJ);
-# if defined (HAVE_SUNDIALS_IDAKLU)
+# if defined (HAVE_SUNDIALS_SUNLINSOL_KLU)
static int
jacsparse (realtype t, realtype cj, N_Vector yy, N_Vector yyp,
- N_Vector, SlsMat Jac, void *user_data, N_Vector,
+ N_Vector, SUNMatrix Jac, void *user_data, N_Vector,
N_Vector, N_Vector)
{
IDA *self = static_cast <IDA *> (user_data);
@@ -227,7 +253,7 @@ namespace octave
void
jacsparse_impl (realtype t, realtype cj, N_Vector& yy,
- N_Vector& yyp, SlsMat& Jac);
+ N_Vector& yyp, SUNMatrix& Jac);
#endif
void set_maxstep (realtype maxstep);
@@ -291,6 +317,8 @@ namespace octave
DAEJacFuncSparse jacspfun;
DAEJacCellDense jacdcell;
DAEJacCellSparse jacspcell;
+ SUNMatrix sunJacMatrix;
+ SUNLinearSolver sunLinearSolver;
};
int
@@ -323,36 +351,61 @@ namespace octave
}
void
- IDA::set_up (void)
+ IDA::set_up (const ColumnVector& y)
{
+ N_Vector yy = ColToNVec(y, num);
+
if (havejacsparse)
{
-# if defined (HAVE_SUNDIALS_IDAKLU)
- if (IDAKLU (mem, num, num*num, CSC_MAT) != 0)
- error ("IDAKLU solver not initialized");
+#if defined (HAVE_SUNDIALS_SUNLINSOL_KLU)
+
+ sunJacMatrix = SUNSparseMatrix (num, num, num*num, CSC_MAT);
+ if (! sunJacMatrix)
+ error ("Unable to create sparse Jacobian for Sundials");
+
+ sunLinearSolver = SUNKLU (yy, sunJacMatrix);
+ if (! sunLinearSolver)
+ error ("Unable to create KLU sparse solver");
+
+ if (IDADlsSetLinearSolver (mem, sunLinearSolver, sunJacMatrix))
+ error ("Unable to set sparse linear solver");
+
+ IDADlsSetJacFn(mem, IDA::jacsparse);
- IDASlsSetSparseJacFn (mem, IDA::jacsparse);
# else
- error ("IDAKLU is not available in this version of Octave");
+ error ("SUNDIALS SUNLINSOL KLU is not available in this version of Octave");
# endif
+
}
else
{
- if (IDADense (mem, num) != 0)
- error ("IDADense solver not initialized");
- if (havejac && IDADlsSetDenseJacFn (mem, IDA::jacdense) != 0)
- error ("Dense Jacobian not set");
+ sunJacMatrix = SUNDenseMatrix (num, num);
+ if (! sunJacMatrix)
+ error ("Unable to create dense Jacobian for Sundials");
+
+ sunLinearSolver = SUNDenseLinearSolver(yy, sunJacMatrix);
+ if (! sunLinearSolver)
+ error ("Unable to create dense linear solver");
+
+ if (IDADlsSetLinearSolver (mem, sunLinearSolver, sunJacMatrix))
+ error ("Unable to set dense linear solver");
+
+ if (havejac && IDADlsSetJacFn (mem, IDA::jacdense) != 0)
+ error("Unable to set dense Jacobian function");
+
}
}
void
- IDA::jacdense_impl (long int Neq, realtype t, realtype cj,
- N_Vector& yy, N_Vector& yyp, DlsMat& JJ)
+ IDA::jacdense_impl (realtype t, realtype cj,
+ N_Vector& yy, N_Vector& yyp, SUNMatrix& JJ)
{
BEGIN_INTERRUPT_WITH_EXCEPTIONS;
+ long int Neq = NV_LENGTH_S(yy);
+
ColumnVector y = NVecToCol (yy, Neq);
ColumnVector yp = NVecToCol (yyp, Neq);
@@ -366,15 +419,15 @@ namespace octave
std::copy (jac.fortran_vec (),
jac.fortran_vec () + jac.numel (),
- JJ->data);
+ SUNDenseMatrix_Data(JJ));
END_INTERRUPT_WITH_EXCEPTIONS;
}
-# if defined (HAVE_SUNDIALS_IDAKLU)
+# if defined (HAVE_SUNDIALS_SUNLINSOL_KLU)
void
IDA::jacsparse_impl (realtype t, realtype cj, N_Vector& yy, N_Vector& yyp,
- SlsMat& Jac)
+ SUNMatrix& Jac)
{
BEGIN_INTERRUPT_WITH_EXCEPTIONS;
@@ -390,17 +443,18 @@ namespace octave
else
jac = (*jacspcell) (spdfdy, spdfdyp, cj);
- SparseSetMatToZero (Jac);
- int *colptrs = *(Jac->colptrs);
- int *rowvals = *(Jac->rowvals);
+ SUNMatZero_Sparse (Jac);
+ sunindextype *colptrs = SUNSparseMatrix_IndexPointers (Jac);
+ sunindextype *rowvals = SUNSparseMatrix_IndexValues (Jac);
for (int i = 0; i < num + 1; i++)
colptrs[i] = jac.cidx(i);
+ double *d = SUNSparseMatrix_Data (Jac);
for (int i = 0; i < jac.nnz (); i++)
{
rowvals[i] = jac.ridx(i);
- Jac->data[i] = jac.data(i);
+ d[i] = jac.data(i);
}
END_INTERRUPT_WITH_EXCEPTIONS;
@@ -567,7 +621,7 @@ namespace octave
//main loop
while (((posdirection == 1 && tsol < tend)
- || (posdirection == 0 && tsol > tend))
+ || (posdirection == 0 && tsol > tend))
&& status == 0)
{
if (IDASolve (mem, tend, &tsol, yy, yyp, IDA_ONE_STEP) != 0)
@@ -692,7 +746,7 @@ namespace octave
// Linear interpolation
ie(0) = index(0);
te(0) = tsol - val (index(0)) * (tsol - told)
- / (val (index(0)) - oldval (index(0)));
+ / (val (index(0)) - oldval (index(0)));
ColumnVector ytemp
= y - ((tsol - te(0)) * (y - yold) / (tsol - told));
@@ -717,7 +771,7 @@ namespace octave
// Linear interpolation
ie(temp+i) = index(i);
te(temp+i) = tsol - val(index(i)) * (tsol - told)
- / (val(index(i)) - oldval(index(i)));
+ / (val(index(i)) - oldval(index(i)));
ColumnVector ytemp
= y - (tsol - te (temp + i)) * (y - yold) / (tsol - told);
@@ -1096,7 +1150,7 @@ namespace octave
event_fcn = options.getfield("Events").function_value ();
// Set up linear solver
- dae.set_up ();
+ dae.set_up (y0);
// Integrate
retval = dae.integrate (numt, tspan, y0, yp0, refine,
diff -up octave-5.0.91/m4/acinclude.m4.sundials3 octave-5.0.91/m4/acinclude.m4
--- octave-5.0.91/m4/acinclude.m4.sundials3 2019-02-04 10:50:20.000000000 -0700
+++ octave-5.0.91/m4/acinclude.m4 2019-02-05 22:05:44.100260576 -0700
@@ -2210,14 +2210,11 @@ dnl Check whether SUNDIALS IDA library i
dnl precision realtype.
dnl
AC_DEFUN([OCTAVE_CHECK_SUNDIALS_SIZEOF_REALTYPE], [
- AC_CHECK_HEADERS([ida/ida.h ida.h])
AC_CACHE_CHECK([whether SUNDIALS IDA is configured with double precision realtype],
[octave_cv_sundials_realtype_is_double],
[AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[
#if defined (HAVE_IDA_IDA_H)
#include <ida/ida.h>
- #else
- #include <ida.h>
#endif
#include <assert.h>
]], [[
@@ -2233,61 +2230,72 @@ AC_DEFUN([OCTAVE_CHECK_SUNDIALS_SIZEOF_R
fi
])
dnl
-dnl Check whether SUNDIALS IDA library is configured with IDAKLU
+dnl Check whether SUNDIALS IDA library is configured with SUNLINSOL_KLU
dnl enabled.
dnl
-AC_DEFUN([OCTAVE_CHECK_SUNDIALS_IDAKLU], [
- AC_CHECK_HEADERS([ida/ida_klu.h ida_klu.h])
- AC_CACHE_CHECK([whether SUNDIALS IDA is configured with IDAKLU enabled],
- [octave_cv_sundials_idaklu],
+AC_DEFUN([OCTAVE_CHECK_SUNDIALS_SUNLINSOL_KLU], [
+ AC_CHECK_HEADERS([sundials/sundials_sparse.h sunlinsol/sunlinsol_klu.h sunmatrix/sunmatrix_sparse.h])
+ AC_CACHE_CHECK([whether SUNDIALS IDA is configured with SUNLINSOL_KLU enabled],
+ [octave_cv_sundials_sunlinsol_klu],
[AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[
- #if defined (HAVE_IDA_IDA_KLU_H)
- #include <ida/ida_klu.h>
- #else
- #include <ida_klu.h>
+ #if defined (HAVE_IDA_IDA_H)
+ #include <ida/ida.h>
+ #endif
+ #if defined (HAVE_SUNDIALS_SUNDIALS_SPARSE_H)
+ #include <sundials/sundials_sparse.h>
+ #endif
+ #if defined (HAVE_SUNLINSOL_SUNLINSOL_KLU_H)
+ #include <sunlinsol/sunlinsol_klu.h>
#endif
]], [[
- IDAKLU (0, 0, 0, 0);
+ SUNKLU (0, 0);
]])],
- octave_cv_sundials_idaklu=yes,
- octave_cv_sundials_idaklu=no)
+ octave_cv_sundials_sunlinsol_klu=yes,
+ octave_cv_sundials_sunlinsol_klu=no)
])
- if test $octave_cv_sundials_idaklu = yes; then
- AC_DEFINE(HAVE_SUNDIALS_IDAKLU, 1,
- [Define to 1 if SUNDIALS IDA is configured with IDAKLU enabled.])
+ if test $octave_cv_sundials_sunlinsol_klu = yes; then
+ AC_DEFINE(HAVE_SUNDIALS_SUNLINSOL_KLU, 1,
+ [Define to 1 if SUNDIALS IDA is configured with SUNLINSOL_KLU enabled.])
else
- warn_sundials_idaklu="SUNDIALS IDA library not configured with IDAKLU, ode15i and ode15s will not support the sparse Jacobian feature"
- OCTAVE_CONFIGURE_WARNING([warn_sundials_idaklu])
+ warn_sundials_idaklu="SUNDIALS IDA library not configured with SUNLINSOL_KLU, ode15i and ode15s will not support the sparse Jacobian feature"
+ OCTAVE_CONFIGURE_WARNING([warn_sundials_sunlinsol_klu])
fi
])
dnl
-dnl Check whether SUNDIALS IDA library has the IDADENSE linear solver.
+dnl Check whether SUNDIALS IDA library has the SUNLINSOL_DENSE linear solver.
dnl The IDADENSE API was removed in SUNDIALS version 3.0.0.
dnl
-AC_DEFUN([OCTAVE_CHECK_SUNDIALS_IDA_DENSE], [
- AC_CHECK_HEADERS([ida/ida_dense.h ida_dense.h])
- AC_CACHE_CHECK([whether SUNDIALS IDA includes the IDADENSE linear solver],
- [octave_cv_sundials_ida_dense],
+AC_DEFUN([OCTAVE_CHECK_SUNDIALS_SUNLINSOL_DENSE], [
+ AC_CHECK_HEADERS([sunlinsol/sunlinsol_dense.h sundials/sundials_matrix.h sundials/sundials_linearsolver.h ida/ida_direct.h])
+ AC_CACHE_CHECK([whether SUNDIALS IDA includes the SUNLINSOL_DENSE linear solver],
+ [octave_cv_sundials_sunlinsol_dense],
[AC_COMPILE_IFELSE([AC_LANG_PROGRAM([[
- #if defined (HAVE_IDA_IDA_DENSE_H)
- #include <ida/ida_dense.h>
- #else
- #include <ida_dense.h>
+ #if defined (HAVE_IDA_IDA_H)
+ #include <ida/ida.h>
+ #endif
+ #if defined (HAVE_SUNDIALS_SUNDIALS_MATRIX_H)
+ #include <sundials/sundials_matrix.h>
+ #endif
+ #if defined (HAVE_SUNDIALS_SUNDIALS_LINEARSOLVER_H)
+ #include <sundials/sundials_linearsolver.h>
#endif
+ #if defined (HAVE_IDA_IDA_DIRECT_H)
+ #include <ida/ida_direct.h>
+ #endif
]], [[
void *mem = 0;
long int num = 0;
IDADense (mem, num);
]])],
- octave_cv_sundials_ida_dense=yes,
- octave_cv_sundials_ida_dense=no)
+ octave_cv_sundials_sunlinsol_dense=yes,
+ octave_cv_sundials_sunlinsol_dense=no)
])
- if test $octave_cv_sundials_ida_dense = yes; then
- AC_DEFINE(HAVE_SUNDIALS_IDADENSE, 1,
- [Define to 1 if SUNDIALS IDA includes the IDADENSE linear solver.])
+ if test $octave_cv_sundials_sunlinsol_dense = yes; then
+ AC_DEFINE(HAVE_SUNDIALS_SUNLINSOL_DENSE, 1,
+ [Define to 1 if SUNDIALS IDA includes the SUNLINSOL_DENSE linear solver.])
else
- warn_sundials_ida_dense="SUNDIALS IDA library does not include the IDADENSE linear solver, ode15i and ode15s will be disabled"
- OCTAVE_CONFIGURE_WARNING([warn_sundials_ida_dense])
+ warn_sundials_ida_dense="SUNDIALS IDA library does not include the SUNLINSOL_DENSE linear solver, ode15i and ode15s will be disabled"
+ OCTAVE_CONFIGURE_WARNING([warn_sundials_sunlinsol_dense])
fi
])
dnl
diff -up octave-5.0.91/scripts/ode/ode15i.m.sundials3 octave-5.0.91/scripts/ode/ode15i.m
--- octave-5.0.91/scripts/ode/ode15i.m.sundials3 2019-02-04 10:50:20.000000000 -0700
+++ octave-5.0.91/scripts/ode/ode15i.m 2019-02-05 22:05:44.101260588 -0700
@@ -452,7 +452,7 @@ endfunction
%! assert ([t(end), y(end,:)], fref, 1e-3);
## Jacobian fun sparse
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! opt = odeset ("Jacobian", @jacfunsparse, "AbsTol", 1e-7, "RelTol", 1e-7);
%! [t, y] = ode15i (@rob, [0, 100], [1; 0; 0], [-1e-4; 1e-4; 0], opt);
%! assert ([t(end), y(end,:)], fref, 1e-3);
@@ -545,7 +545,7 @@ endfunction
%! "invalid value assigned to field 'Jacobian'");
## Jacobian cell sparse wrong dimension
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! DFDY = sparse ([-0.04, 1;
%! 0.04, 1]);
%! DFDYP = sparse ([-1, 0, 0;
diff -up octave-5.0.91/scripts/ode/ode15s.m.sundials3 octave-5.0.91/scripts/ode/ode15s.m
--- octave-5.0.91/scripts/ode/ode15s.m.sundials3 2019-02-04 10:50:20.000000000 -0700
+++ octave-5.0.91/scripts/ode/ode15s.m 2019-02-05 22:05:44.102260599 -0700
@@ -545,21 +545,21 @@ endfunction
%! [t, y] = ode15s (@rob, [0, 100], [1; 0; 0], opt);
%! assert ([t(end), y(end,:)], frefrob, 1e-3);
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! opt = odeset ("MStateDependence", "none",
%! "Mass", [1, 0, 0; 0, 1, 0; 0, 0, 0],
%! "Jacobian", @jacfunsparse);
%! [t, y] = ode15s (@rob, [0, 100], [1; 0; 0], opt);
%! assert ([t(end), y(end,:)], frefrob, 1e-3);
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! opt = odeset ("MStateDependence", "none",
%! "Mass", sparse ([1, 0, 0; 0, 1, 0; 0, 0, 0]),
%! "Jacobian", @jacfunsparse);
%! [t, y] = ode15s (@rob, [0, 100], [1; 0; 0], opt);
%! assert ([t(end), y(end,:)], frefrob, 1e-3);
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! warning ("off", "ode15s:mass_state_dependent_provided", "local");
%! opt = odeset ("MStateDependence", "none",
%! "Mass", @massdensefunstate,
@@ -575,14 +575,14 @@ endfunction
%! [t, y] = ode15s (@rob, [0, 100], [1; 0; 0], opt);
%! assert ([t(end), y(end,:)], frefrob, 1e-3);
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! opt = odeset ("MStateDependence", "none",
%! "Mass", @massdensefuntime,
%! "Jacobian", @jacfunsparse);
%! [t, y] = ode15s (@rob, [0, 100], [1; 0; 0], opt);
%! assert ([t(end), y(end,:)], frefrob, 1e-3);
-%!testif HAVE_SUNDIALS_IDAKLU
+%!testif HAVE_SUNDIALS_SUNLINSOL_KLU
%! opt = odeset ("MStateDependence", "none",
%! "Mass", @masssparsefuntime,
%! "Jacobian", @jacfunsparse);

41
octave-term.patch Normal file
View File

@ -0,0 +1,41 @@
# HG changeset patch
# User Mike Miller <mtmiller@octave.org>
# Date 1458325635 25200
# Node ID c64e57319f081803d4510a09478e853674e90625
# Parent eebbb80bf6d9fa7e5e0a75a4e0c3d589d9be55d9
octave-gui: Set TERM unconditionally to Octave's expected terminal type (bug #47449)
* octave-gui.cc (octave_start_gui): Set TERM unconditionally to the expected
terminal type for the host system.
diff --git a/libgui/src/octave-gui.cc b/libgui/src/octave-gui.cc
--- a/libgui/src/octave-gui.cc
+++ b/libgui/src/octave-gui.cc
@@ -160,20 +160,12 @@
// update network-settings
resource_manager::update_network_settings ();
-#if ! defined (__WIN32__) || defined (__CYGWIN__)
- // If we were started from a launcher, TERM might not be
- // defined, but we provide a terminal with xterm
- // capabilities.
-
- std::string term = octave_env::getenv ("TERM");
-
- if (term.empty ())
- octave_env::putenv ("TERM", "xterm");
+ // We provide specific terminal capabilities, so ensure that TERM is
+ // always set appropriately
+#if defined (__WIN32__) && ! defined (__CYGWIN__)
+ octave_env::putenv ("TERM", "cygwin");
#else
- std::string term = octave_env::getenv ("TERM");
-
- if (term.empty ())
- octave_env::putenv ("TERM", "cygwin");
+ octave_env::putenv ("TERM", "xterm");
#endif
// shortcut manager

12
octave-texinfo5.patch Normal file
View File

@ -0,0 +1,12 @@
diff -up octave-4.0.3/libinterp/dldfcn/dmperm.cc.texinfo5 octave-4.0.3/libinterp/dldfcn/dmperm.cc
--- octave-4.0.3/libinterp/dldfcn/dmperm.cc.texinfo5 2016-09-09 11:35:32.560355572 -0600
+++ octave-4.0.3/libinterp/dldfcn/dmperm.cc 2016-09-09 11:36:04.340209857 -0600
@@ -136,7 +136,7 @@ DEFUN_DLD (dmperm, args, nargout,
@deftypefn {Loadable Function} {@var{p} =} dmperm (@var{S})\n\
@deftypefnx {Loadable Function} {[@var{p}, @var{q}, @var{r}, @var{S}] =} dmperm (@var{S})\n\
\n\
-@cindex @nospell{Dulmage-Mendelsohn} decomposition\n\
+@cindex Dulmage-Mendelsohn decomposition\n\
Perform a @nospell{Dulmage-Mendelsohn} permutation of the sparse matrix\n\
@var{S}.\n\
\n\

View File

@ -1,46 +1,51 @@
# From src/version.h:#define OCTAVE_API_VERSION
%global octave_api api-v53
%global octave_api api-v50+
%{?!_pkgdocdir: %global _pkgdocdir %{_docdir}/%{name}}
%global macrosdir %(d=%{_rpmconfigdir}/macros.d; [ -d $d ] || d=%{_sysconfdir}/rpm; echo $d)
%global builddocs 1
# Use Qt5 on F26+
%if 0%{?fedora}
%bcond_without qt5
%else
%bcond_with qt5
%endif
# For rc versions, change release manually
#global rcver 2
%if 0%{?rcver:1}
%global rctag -rc%{?rcver}
%global relsuf .rc%{?rcver}
%global rctag -rc%{?rcver}
%endif
Name: octave
Epoch: 6
Version: 5.1.0
Release: 2%{?rcver:.rc%{rcver}}%{?dist}
Version: 4.0.3
Release: 2%{?dist}
Summary: A high-level language for numerical computations
Group: Applications/Engineering
License: GPLv3+
URL: http://www.octave.org
Source0: https://ftp.gnu.org/gnu/octave/octave-%{version}.tar.lz
#Source0: https://alpha.gnu.org/gnu/octave/octave-%{version}%{?rctag}.tar.lz
%if 0%{!?rcver:1}
Source0: ftp://ftp.gnu.org/gnu/octave/octave-%{version}.tar.xz
%else
Source0: ftp://alpha.gnu.org/gnu/octave/octave-%{version}%{rctag}.tar.gz
%endif
# RPM macros for helping to build Octave packages
Source1: macros.octave
Source2: xorg.conf
# Prebuilt docs from Fedora for EPEL
Source3: octave-5.1.0-docs.tar.lz
# SUNDIALS 3 support
# https://savannah.gnu.org/bugs/?52475
Patch1: octave-sundials3.patch
# Proper EOF handling
# https://bugzilla.redhat.com/show_bug.cgi?id=1705129
# https://hg.savannah.gnu.org/hgweb/octave/rev/c3716220d5b9
Patch2: octave-eof.patch
# Fix to allow pkg build to use a directory
# https://savannah.gnu.org/bugs/?func=detailitem&item_id=32839
Patch0: octave-pkgbuilddir.patch
# Remove project_group from appdata.xml file
# https://bugzilla.redhat.com/show_bug.cgi?id=1293561
Patch2: octave-appdata.patch
# Fix build with texinfo5 on <=EL7
# http://hg.savannah.gnu.org/hgweb/octave/rev/b602ce0b5acf
Patch3: octave-texinfo5.patch
# Add needed #include <math.h> to bring in gnulib
Patch4: octave-gnulib.patch
# Handle g++ 6 abs() change
Patch5: octave-abs.patch
# Make sure TERM variable is set correctly
# http://hg.savannah.gnu.org/hgweb/octave/raw-rev/c64e57319f08
Patch6: octave-term.patch
Provides: octave(api) = %{octave_api}
Provides: bundled(gnulib)
@ -60,11 +65,7 @@ Provides: bundled(ranlib)
Provides: bundled(slatec-err)
Provides: bundled(slatec-fn)
# For Source0
BuildRequires: lzip
# For autoreconf
BuildRequires: automake
BuildRequires: libtool
# For validating desktop and appdata files
BuildRequires: desktop-file-utils
@ -73,15 +74,13 @@ BuildRequires: libappstream-glib
%endif
BuildRequires: arpack-devel
BuildRequires: openblas-devel
BuildRequires: atlas-devel
BuildRequires: bison
BuildRequires: bzip2-devel
BuildRequires: curl-devel
BuildRequires: fftw-devel
BuildRequires: flex
BuildRequires: fltk-devel
BuildRequires: ftgl-devel
BuildRequires: gcc-c++
BuildRequires: gcc-gfortran
BuildRequires: ghostscript
BuildRequires: gl2ps-devel
@ -91,9 +90,6 @@ BuildRequires: gperf
BuildRequires: GraphicsMagick-c++-devel
BuildRequires: hdf5-devel
BuildRequires: java-devel
%if 0%{?fedora}
BuildRequires: javapackages-local
%endif
BuildRequires: less
BuildRequires: libsndfile-devel
BuildRequires: libX11-devel
@ -106,16 +102,9 @@ BuildRequires: pcre-devel
BuildRequires: portaudio-devel
BuildRequires: qhull-devel
BuildRequires: qrupdate-devel
%if %{with qt5}
BuildRequires: qscintilla-qt5-devel
BuildRequires: qt5-linguist
BuildRequires: qt5-qttools-devel
%else
BuildRequires: qscintilla-devel
%endif
BuildRequires: readline-devel
BuildRequires: suitesparse-devel
BuildRequires: sundials-devel
BuildRequires: tex(dvips)
BuildRequires: texinfo
BuildRequires: texinfo-tex
@ -135,31 +124,11 @@ BuildRequires: xorg-x11-drv-dummy
%endif
BuildRequires: zip
Requires: epstool
Requires: gnuplot
Requires: gnuplot-common
Requires: hdf5 = %{_hdf5_version}
Requires: hicolor-icon-theme
Requires: java-headless
Requires: less
Requires: info
Requires: texinfo
# Rrom scripts/general/private/__publish_latex_output__.m
Requires: tex(amssymb.sty)
Requires: tex(fontenc.sty)
Requires: tex(graphicx.sty)
Requires: tex(hyperref.sty)
Requires: tex(inputenc.sty)
Requires: tex(listings.sty)
Requires: tex(lmodern.sty)
Requires: tex(mathtools.sty)
Requires: tex(titlesec.sty)
Requires: tex(xcolor.sty)
# Rrom scripts/plot/util/print.m:
Requires: tex(color.sty)
Requires: tex(epsfig.sty)
Requires: tex(geometry.sty)
Requires: tex(graphicx.sty)
Requires: epstool gnuplot gnuplot-common less info texinfo
Requires: hdf5 = %{_hdf5_version}
Requires: java-headless
Requires(post): info
Requires(preun): info
%description
@ -179,15 +148,10 @@ C++, C, Fortran, or other languages.
%package devel
Summary: Development headers and files for Octave
Group: Development/Libraries
Requires: %{name} = %{epoch}:%{version}-%{release}
Requires: gcc-c++
Requires: gcc-gfortran
Requires: fftw-devel%{?_isa}
Requires: hdf5-devel%{?_isa}
Requires: openblas-devel%{?_isa}
Requires: readline-devel%{?_isa}
Requires: zlib-devel
Requires: libappstream-glib
Requires: readline-devel fftw-devel hdf5-devel zlib-devel
Requires: atlas-devel gcc-c++ gcc-gfortran
%description devel
The octave-devel package contains files needed for developing
@ -196,6 +160,7 @@ applications which use GNU Octave.
%package doc
Summary: Documentation for Octave
Group: Documentation
BuildArch: noarch
%description doc
@ -203,20 +168,38 @@ This package contains documentation for Octave.
%prep
%setup -q -n %{name}-%{version}%{?rctag}
%patch2 -p1 -b .eof
# EPEL7's autoconf/automake is too old so don't do
# unneeded patches there
%if 0%{?fedora}
%patch1 -p1 -b .sundials3
autoreconf -i
%patch0 -p1 -b .pkgbuilddir
%patch2 -p1 -b .appdata
%patch3 -p1 -b .texinfo5
%patch4 -p1 -b .gnulib
%patch5 -p1 -b .abs
%patch6 -p1 -b .term
# Explicitly use gnulib headers
%if 0%{?fedora} >= 24
find -name \*.cc -o -name \*.h -o -name \*.yy | xargs sed -i -e 's/#include <c\(math\|stdlib\)>/#include <\1.h>/'
%endif
find -name \*.h -o -name \*.cc | xargs sed -i -e 's/<config.h>/"config.h"/' -e 's/<base-list.h>/"base-list.h"/'
# Check permissions
find -name *.cc -exec chmod 644 {} \;
# Remove unused fftpack
sed -i -e '/fftpack/d' liboctave/cruft/module.mk
rm -r liboctave/cruft/fftpack
autoreconf
%build
%global enable64 no
export F77=gfortran
# TODO: some items appear to be bundled in libcruft..
# TODO: some items appear to be bundled in libcruft..
# gl2ps.c is bundled. Anything else?
%if 0%{?fedora} >= 21 || 0%{?rhel} >= 7
%global atlasblaslib -ltatlas
%global atlaslapacklib -ltatlas
%else
%global atlasblaslib -lf77blas -latlas
%global atlaslapacklib -llapack
%endif
%if !%{builddocs}
%global disabledocs --disable-docs
%endif
@ -225,16 +208,12 @@ libjvm=$(find /usr/lib/jvm/jre/lib -name libjvm.so -printf %h)
export JAVA_HOME=%{java_home}
# JIT support is still experimental, and causes a segfault on ARM.
# --enable-float-truncate - https://savannah.gnu.org/bugs/?40560
# sundials headers need to know where to find suitesparse headers
export CPPFLAGS=-I%{_includedir}/suitesparse
# Disable _GLIBCXX_ASSERTIONS for now
# https://savannah.gnu.org/bugs/?55547
export CXXFLAGS="$(echo %optflags | sed s/-Wp,-D_GLIBCXX_ASSERTIONS//)"
%configure --enable-shared --disable-static --enable-64=%enable64 \
--enable-float-truncate \
%{?disabledocs} \
--disable-silent-rules \
--with-java-includedir=/usr/lib/jvm/java/include \
--with-blas="-L%{_libdir}/atlas %{atlasblaslib}" \
--with-lapack="-L%{_libdir}/atlas %{atlaslapacklib}" \
--with-java-libdir=$libjvm \
--with-qrupdate \
--with-amd --with-umfpack --with-colamd --with-ccolamd --with-cholmod \
@ -242,20 +221,20 @@ export CXXFLAGS="$(echo %optflags | sed s/-Wp,-D_GLIBCXX_ASSERTIONS//)"
--disable-jit
# Check that octave_api is set correctly (autogenerated file)
make liboctave/version.h
if ! grep -q '^#define OCTAVE_API_VERSION "%{octave_api}"' liboctave/version.h
make -C libinterp version.h
if ! grep -q '^#define OCTAVE_API_VERSION "%{octave_api}"' libinterp/version.h
then
echo "octave_api variable in spec does not match liboctave/version.h"
echo "octave_api variable in spec does not match libinterp/version.h"
exit 1
fi
%make_build OCTAVE_RELEASE="Fedora %{version}%{?rctag}-%{release}"
make OCTAVE_RELEASE="Fedora %{version}%{?rctag}-%{release}" %{?_smp_mflags}
%install
%make_install
make install DESTDIR=%{buildroot}
# Docs - In case we didn't build them and to explicitly install pre-built docs
make install-data install-html install-info install-pdf DESTDIR=%{buildroot}
make -C doc install-data install-html install-info install-pdf DESTDIR=%{buildroot}
mkdir -p %{buildroot}%{_pkgdocdir}
cp -ar AUTHORS BUGS ChangeLog examples NEWS README %{buildroot}%{_pkgdocdir}/
cp -a doc/refcard/*.pdf %{buildroot}%{_pkgdocdir}/
@ -263,9 +242,6 @@ cp -a doc/refcard/*.pdf %{buildroot}%{_pkgdocdir}/
# No info directory
rm -f %{buildroot}%{_infodir}/dir
# EL7's makeinfo doesn't support @sortas, so use prebuilt docs
%{?el7:tar xvf %SOURCE3 -C %{buildroot}}
# Make library links
mkdir -p %{buildroot}%{_sysconfdir}/ld.so.conf.d
echo "%{_libdir}/octave/%{version}%{?rctag}" > %{buildroot}%{_sysconfdir}/ld.so.conf.d/octave-%{_arch}.conf
@ -276,11 +252,9 @@ perl -pi -e "s,%{buildroot},," %{buildroot}%{_datadir}/%{name}/ls-R
# Make sure ls-R exists
touch %{buildroot}%{_datadir}/%{name}/ls-R
desktop-file-validate %{buildroot}%{_datadir}/applications/org.octave.Octave.desktop
# RHEL7 still doesn't like the GNU project_group
%{?el7:sed -i -e /project_group/d %{buildroot}/%{_datadir}/metainfo/org.octave.Octave.appdata.xml}
desktop-file-validate %{buildroot}%{_datadir}/applications/www.octave.org-octave.desktop
%if 0%{?fedora} || 0%{?rhel} >= 7
appstream-util validate-relax --nonet %{buildroot}/%{_datadir}/metainfo/org.octave.Octave.appdata.xml
appstream-util validate-relax --nonet %{buildroot}/%{_datadir}/appdata/*.appdata.xml
%endif
# Create directories for add-on packages
@ -292,7 +266,7 @@ mkdir -p %{buildroot}%{_libdir}/%{name}/packages
touch %{buildroot}%{_datadir}/%{name}/octave_packages
# Fix multilib installs
for include in octave-config defaults
for include in config defaults oct-conf
do
mv %{buildroot}%{_includedir}/%{name}-%{version}%{?rctag}/%{name}/${include}.h \
%{buildroot}%{_includedir}/%{name}-%{version}%{?rctag}/%{name}/${include}-%{__isa_bits}.h
@ -361,11 +335,36 @@ fi
$Xorg -noreset +extension GLX +extension RANDR +extension RENDER -logfile ./xorg.log -config ./xorg.conf :99 &
sleep 2
export DISPLAY=:99
make check %{?el7:|| :}
make check
%post
/sbin/ldconfig
/bin/touch --no-create %{_datadir}/icons/hicolor &>/dev/null || :
%if %{builddocs}
/sbin/install-info --info-dir=%{_infodir} --section="Programming" \
%{_infodir}/octave.info || :
%endif
%preun
%if %{builddocs}
if [ "$1" = "0" ]; then
/sbin/install-info --delete --info-dir=%{_infodir} %{_infodir}/octave.info || :
fi
%endif
%postun
/sbin/ldconfig
if [ $1 -eq 0 ] ; then
/bin/touch --no-create %{_datadir}/icons/hicolor &>/dev/null
/usr/bin/gtk-update-icon-cache %{_datadir}/icons/hicolor &>/dev/null || :
fi
%posttrans
/usr/bin/gtk-update-icon-cache %{_datadir}/icons/hicolor &>/dev/null || :
%ldconfig_scriptlets
%files
%{!?_licensedir:%global license %%doc}
%license COPYING
%{_pkgdocdir}/AUTHORS
%{_pkgdocdir}/BUGS
@ -380,10 +379,10 @@ make check %{?el7:|| :}
%{_mandir}/man1/octave*.1.*
%{_infodir}/liboctave.info*
%{_infodir}/octave.info*
%{_datadir}/applications/org.octave.Octave.desktop
%{_datadir}/appdata/www.octave.org-octave.appdata.xml
%{_datadir}/applications/www.octave.org-octave.desktop
%{_datadir}/icons/hicolor/*/apps/octave.png
%{_datadir}/icons/hicolor/scalable/apps/octave.svg
%{_datadir}/metainfo/org.octave.Octave.appdata.xml
# octave_packages is %ghost, so need to list everything else separately
%dir %{_datadir}/octave
%{_datadir}/octave/%{version}%{?rctag}/
@ -397,8 +396,6 @@ make check %{?el7:|| :}
%{_bindir}/mkoctfile
%{_bindir}/mkoctfile-%{version}%{?rctag}
%{_includedir}/octave-%{version}%{?rctag}/
%{_libdir}/pkgconfig/octave.pc
%{_libdir}/pkgconfig/octinterp.pc
%{_mandir}/man1/mkoctfile.1.*
%files doc
@ -410,167 +407,6 @@ make check %{?el7:|| :}
%{_pkgdocdir}/refcard*.pdf
%changelog
* Wed Jul 31 2019 Orion Poplawski <orion@nwra.com> - 6:5.1.0-2
- Drop use of %%buildarch in macros.octave (bugz#1733898)
* Thu Jul 25 2019 Fedora Release Engineering <releng@fedoraproject.org> - 6:5.1.0-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Sun Jun 16 2019 Orion Poplawski <orion@nwra.com> - 6:5.1.0-1
- Update to 5.1.0
* Mon May 6 2019 Orion Poplawski <orion@nwra.com> - 6:4.4.1-8
- Backport upstream patch for proper EOF handling (bugz#1705129)
* Tue Apr 23 2019 Björn Esser <besser82@fedoraproject.org> - 6:4.4.1-7
- rebuilt (sundials)
* Sat Mar 16 2019 Orion Poplawski <orion@nwra.com> - 6:4.4.1-6
- Rebuild for hdf5 1.10.5
* Thu Mar 7 2019 Tim Landscheidt <tim@tim-landscheidt.de> - 6:4.4.1-5
- Remove obsolete requirements for post/preun scriptlets
* Sun Feb 17 2019 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 6:4.4.1-4
- Rebuild for readline 8.0
* Sat Feb 16 2019 Björn Esser <besser82@fedoraproject.org> - 6:4.4.1-3
- rebuilt (qscintilla)
* Tue Feb 12 2019 Björn Esser <besser82@fedoraproject.org> - 6:4.4.1-2
- rebuilt (qscintilla)
- Fix pre-release tag
* Fri Feb 01 2019 Fedora Release Engineering <releng@fedoraproject.org> - 6:4.4.1-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Sun Nov 11 2018 Orion Poplawski <orion@nwra.com> - 6:4.4.1-1
- Update to 4.4.1
* Fri Jul 13 2018 Fedora Release Engineering <releng@fedoraproject.org> - 6:4.2.2-6.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Mon Jul 02 2018 Colin B. Macdonald <cbm@m.fsf.org> - 6:4.2.2-6
- macros: support other names for appdata .metainfo.xml files
* Thu Jun 28 2018 Colin B. Macdonald <cbm@m.fsf.org> - 6:4.2.2-5
- macros: support dependencies in octave_pkg_check
* Thu Jun 21 2018 Orion Poplawski <orion@nwra.com> - 6:4.2.2-4
- Add patch to fix crash with Ctrl-D (bug #1589460)
* Sun Jun 17 2018 Orion Poplawski <orion@nwra.com> - 6:4.2.2-3
- Add requires hicolor-icon-theme
- Use make macros
* Sat Jun 2 2018 Jerry James <loganjerry@gmail.com> - 6:4.2.2-2
- Rebuild for glpk 4.65
- Use ldconfig macros
- Add -qbuttongroup patch to fix FTBFS
* Wed Mar 14 2018 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.2-1
- Update to 4.2.2
- Fail build again if make check fails
* Wed Feb 21 2018 Orion Poplawski <orion@nwra.com> - 6:4.2.1-5
- Add BR gcc-c++
* Thu Feb 08 2018 Jitka Plesnikova <jplesnik@redhat.com> - 6:4.2.1-4.5
- Rebuild for hdf5 1.8.20
* Mon Feb 05 2018 Jitka Plesnikova <jplesnik@redhat.com> - 6:4.2.1-4.4
- Rebuild for new gfortran
* Fri Jan 05 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 6:4.2.1-4.3
- Remove obsolete scriptlets
* Sun Aug 13 2017 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.1-4.2
- Make octave-devel require libappstream-glib
* Sat Aug 12 2017 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.1-4.1
- Run appstream-util validate-relax on metainfo.xml files
* Fri Aug 11 2017 Orion Poplawski <orion@nwra.com> - 6:4.2.1-4
- Use openblas on Fedora 27+
* Thu Aug 10 2017 Orion Poplawski <orion@nwra.com> - 6:4.2.1-4
- Install metainfo.xml files in %%octave_pkg_install
* Thu Aug 03 2017 Fedora Release Engineering <releng@fedoraproject.org> - 6:4.2.1-3.2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 6:4.2.1-3.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Tue Jun 13 2017 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.1-3
- Use Qt5 on Fedora 26+
* Wed Apr 5 2017 Jerry James <loganjerry@gmail.com> - 6:4.2.1-2
- Rebuild for glpk 4.61
* Fri Feb 24 2017 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.1-1
- Update to 4.2.1
* Mon Feb 20 2017 Rex Dieter <rdieter@fedoraproject.org> - 6:4.2.0-16
- rebuild (qscintilla)
* Wed Feb 08 2017 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-15
- Have %%octave_pkg_check re-strip shared objects
* Tue Feb 07 2017 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-14
- Rebuild with fixed pkgconf (bug #1419685)
* Sat Jan 28 2017 Björn Esser <besser82@fedoraproject.org> - 6:4.2.0-13
- Rebuilt for GCC-7
* Thu Jan 12 2017 Igor Gnatenko <ignatenko@redhat.com> - 6:4.2.0-12.1
- Rebuild for readline 7.x
* Thu Dec 29 2016 Kalev Lember <klember@redhat.com> - 6:4.2.0-12
- Fix license in appdata file (bug #1293561)
* Fri Dec 09 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-11
- Handle noarch package tarball names
* Fri Dec 09 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-10
- Patch gzip from upstream bug report
* Thu Dec 08 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-9
- Disable more segfaulting tests
* Thu Dec 08 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-8
- Add patch to prevent gzip from deleting target file, instead emit warning
- Drop debug code
- Disable segfaulting osmesa_print and pltopt tests
* Thu Dec 08 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-7
- Fix version option
* Wed Dec 07 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-6
- A desparate attempt to debug octave package building
* Wed Dec 07 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-5
- Build in a build sub-directory
* Wed Dec 07 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-4
- Use 'octave-config -p CANONICAL_HOST_TYPE' in macros
* Wed Dec 07 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-3
- Use %%_host in macros
* Tue Dec 06 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-2
- Rework pkg build/install macros
* Tue Dec 06 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.2.0-1
- Update to 4.2.0
- Drop texinfo5 patch
- Use autoreconf -i
- Add requires for latex packages
- Add implicit patch
* Tue Dec 06 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.0.3-3
- Rebuild for hdf5 1.8.18
* Fri Sep 9 2016 Orion Poplawski <orion@cora.nwra.com> - 6:4.0.3-2
- Add upstream patch to fix build with texinfo 5 on <=EL7
@ -915,7 +751,7 @@ make check %{?el7:|| :}
* Sun Feb 28 2010 Alex Lancaster <alexlan[AT]fedoraproject org> - 6:3.2.4-3
- Temporarily disable %%check to enable build to complete and ensure
upgrade path works. This works around a crash in the imread.m image test
upgrade path works. This works around a crash in the imread.m image test
script, this may be the same problem as described by upstream here:
https://www-old.cae.wisc.edu/pipermail/octave-maintainers/2010-January/014891.html
@ -940,7 +776,7 @@ make check %{?el7:|| :}
- Re-add make check
* Tue Sep 22 2009 Rakesh Pandit <rakesh@fedoraproject.org> - 6:3.2.2-5
- Added categories to desktop file: Education, DataVisualization, NumericalAnalysis
- Added categories to desktop file: Education, DataVisualization, NumericalAnalysis
* Mon Sep 7 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 6:3.2.2-4
- Rebuild against new ATLAS
@ -991,7 +827,7 @@ make check %{?el7:|| :}
well as C++. Hopefully this will #435600 for real.
* Sun Mar 2 2008 Alex Lancaster <alexlan[AT]fedoraproject org> - 6:3.0.0-5
- Backout GCC 4.3 patch temporarily, causes trouble for octave-forge and
- Backout GCC 4.3 patch temporarily, causes trouble for octave-forge and
may not be necessary (#435600)
* Fri Feb 29 2008 Orion Poplawski <orion@cora.nwra.com> 3.0.0-4
@ -1028,7 +864,7 @@ make check %{?el7:|| :}
- New release. Remove old patch.
* Tue Sep 25 2007 Orion Poplawski <orion@ora.nwra.com> 2.9.14-2
- Add /usr/share/octave/packages for add on packages and %%ghost
- Add /usr/share/octave/packages for add on packages and %%ghost
/usr/share/octave/octave_packages
- Add patch for octave package manager that will be going upstream
@ -1049,7 +885,7 @@ make check %{?el7:|| :}
- New release.
* Tue Feb 20 2007 Quentin Spencer <qspencer@users.sourceforge.net> 2.9.9-2
- Fix install-info bug (Bug 219404).
- Fix install-info bug (Bug 219404).
- Add dependency on octave API so that breakages will be detected. (Bug 224050).
- Remove libtermcap-devel as build dependency (Bug 226768).
@ -1188,7 +1024,7 @@ make check %{?el7:|| :}
- Fix configure command. Remove irrelevant files from docs.
* Fri May 27 2005 Quentin Spencer <qspencer@users.sourceforge.net> 2.1.71-3
- Added patch for http://www.octave.org/mailing-lists/bug-octave/2005/617
- Added patch for http://www.octave.org/mailing-lists/bug-octave/2005/617
* Thu May 26 2005 Quentin Spencer <qspencer@users.sourceforge.net> 2.1.71-2
- Added dist tag.
@ -1215,7 +1051,7 @@ make check %{?el7:|| :}
- add $RPM_OPT_FLAGS
* Tue Feb 15 2005 Ivana Varekova <varekova@redhat.com> 2.1.57-10
- Fix bug 142477 - problem with signbit definition (Patch2)
- Fix bug 142477 - problem with signbit definition (Patch2)
* Wed Jan 19 2005 Ivana Varekova <varekova@redhat.com> 2.1.57-9
- Fix bug #142440 - change octave.spec: autoconf is BuildPrereq
@ -1248,7 +1084,7 @@ make check %{?el7:|| :}
* Tue Jun 15 2004 Elliot Lee <sopwith@redhat.com>
- rebuilt
* Tue Mar 30 2004 Karsten Hopp <karsten@redhat.de> 2.1.50-9
* Tue Mar 30 2004 Karsten Hopp <karsten@redhat.de> 2.1.50-9
- remove builddir references from file list (#119112)
* Tue Mar 02 2004 Elliot Lee <sopwith@redhat.com>
@ -1414,7 +1250,7 @@ does not exist.
- Rebuild with new C++
* Mon Jul 3 2000 Matt Wilson <msw@redhat.com>
- added missing %% before {_infodir} in the %%post
- added missing %% before {_infodir} in the %%post
* Fri Jun 09 2000 Trond Eivind Glomsrød <teg@redhat.com>
- 2.1.30 - the old version contains invalid C++ code
@ -1464,8 +1300,8 @@ does not exist.
- removed libreadline stuff from the file list
* Mon Nov 24 1997 Otto Hammersmith <otto@redhat.com>
- changed configure command to put things in $RPM_ARCH-rehat-linux,
rather than genereated one... was causing problems between building
- changed configure command to put things in $RPM_ARCH-rehat-linux,
rather than genereated one... was causing problems between building
on i686 build machine.
* Mon Nov 17 1997 Otto Hammersmith <otto@redhat.com>

View File

@ -1,2 +1 @@
SHA512 (octave-5.1.0.tar.lz) = 34facc20ffceaead05e62e16cc70bd603919c7e52c7489faa17b5c969a160c655f50c4aeb41ecee2e2d0a6245cc3364cf9009ddd3cecb17b9e06bbdacaa0a516
SHA512 (octave-5.1.0-docs.tar.lz) = 6bf24ed95d5d2957271abb8902a156edc588962b95218b05936858fafe8205f4295f072388f7331ad5700946fbae701bd0c3f2a59c258f390ea92c85eb87fdd2
73b140bc69ac21cfaa3e473b91b6842b octave-4.0.3.tar.xz