Enable MPI builds, merged from f16
This commit is contained in:
Orion Poplawski
commit
f5068e6baa
230
netcdf.spec
230
netcdf.spec
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@ -1,6 +1,6 @@
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Name: netcdf
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Version: 4.2
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Release: 0.2.rc2%{?dist}
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Release: 0.3.rc2%{?dist}
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Summary: Libraries for the Unidata network Common Data Form
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Group: Applications/Engineering
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@ -23,20 +23,30 @@ BuildRequires: zlib-devel
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%ifnarch s390 s390x %{arm}
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BuildRequires: valgrind
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%endif
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#mpiexec segfaults if ssh is not present
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#https://trac.mcs.anl.gov/projects/mpich2/ticket/1576
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BuildRequires: openssh-clients
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Requires: hdf5 = %{_hdf5_version}
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%package devel
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Summary: Development files for netcdf
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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Requires: pkgconfig
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Requires: hdf5-devel
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Requires: libcurl-devel
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%global with_mpich2 1
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%global with_openmpi 1
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%if 0%{?rhel}
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%ifarch ppc64
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# No mpich2 on ppc64 in EL
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%global with_mpich2 0
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%endif
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%endif
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%ifarch s390 s390x
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# No openmpi on s390(x)
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%global with_openmpi 0
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%endif
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%package static
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Summary: Static libs for netcdf
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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%if %{with_mpich2}
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%global mpi_list mpich2
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%endif
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%if %{with_openmpi}
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%global mpi_list %{?mpi_list} openmpi
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%endif
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%description
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NetCDF (network Common Data Form) is an interface for array-oriented
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@ -69,14 +79,99 @@ NetCDF data is:
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o Sharable: One writer and multiple readers may simultaneously
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access the same NetCDF file.
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%package devel
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Summary: Development files for netcdf
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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Requires: pkgconfig
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Requires: hdf5-devel
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Requires: libcurl-devel
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%description devel
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This package contains the netCDF C header files, shared devel libs, and
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man pages.
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%package static
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Summary: Static libs for netcdf
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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%description static
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This package contains the netCDF C static libs.
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%if %{with_mpich2}
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%package mpich2
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Summary: NetCDF mpich2 libraries
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Group: Development/Libraries
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Requires: mpich2
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BuildRequires: mpich2-devel
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BuildRequires: hdf5-mpich2-devel >= 1.8.4
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%description mpich2
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NetCDF parallel mpich2 libraries
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%package mpich2-devel
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Summary: NetCDF mpich2 development files
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Group: Development/Libraries
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Requires: %{name}-mpich2%{?_isa} = %{version}-%{release}
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Requires: mpich2
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Requires: pkgconfig
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Requires: hdf5-mpich2-devel
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Requires: libcurl-devel
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%description mpich2-devel
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NetCDF parallel mpich2 development files
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%package mpich2-static
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Summary: NetCDF mpich2 static libraries
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Group: Development/Libraries
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Requires: %{name}-mpich2-devel%{?_isa} = %{version}-%{release}
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%description mpich2-static
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NetCDF parallel mpich2 static libraries
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%endif
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%if %{with_openmpi}
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%package openmpi
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Summary: NetCDF openmpi libraries
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Group: Development/Libraries
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Requires: openmpi
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BuildRequires: openmpi-devel
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BuildRequires: hdf5-openmpi-devel >= 1.8.4
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%description openmpi
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NetCDF parallel openmpi libraries
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%package openmpi-devel
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Summary: NetCDF openmpi development files
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Group: Development/Libraries
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Requires: %{name}-openmpi%{_isa} = %{version}-%{release}
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Requires: openmpi-devel
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Requires: pkgconfig
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Requires: hdf5-openmpi-devel
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Requires: libcurl-devel
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%description openmpi-devel
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NetCDF parallel openmpi development files
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%package openmpi-static
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Summary: NetCDF openmpi static libraries
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Group: Development/Libraries
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Requires: %{name}-openmpi-devel%{?_isa} = %{version}-%{release}
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%description openmpi-static
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NetCDF parallel openmpi static libraries
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%endif
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%prep
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%setup -q -n %{name}-%{version}-rc2
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%patch0 -p1 -b .pkgconfig
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@ -84,23 +179,70 @@ This package contains the netCDF C static libs.
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%build
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%configure \
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--enable-shared \
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--enable-netcdf-4 \
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--enable-dap \
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--enable-extra-example-tests \
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--disable-dap-remote-tests
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#Do out of tree builds
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%global _configure ../configure
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#Common configure options
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%global configure_opts \\\
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--enable-shared \\\
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--enable-netcdf-4 \\\
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--enable-dap \\\
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--enable-extra-example-tests \\\
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--disable-dap-remote-tests \\\
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%{nil}
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# Serial build
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mkdir build
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pushd build
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ln -s ../configure .
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%configure %{configure_opts}
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make %{?_smp_mflags}
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popd
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# MPI builds
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export CC=mpicc
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for mpi in %{mpi_list}
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do
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mkdir $mpi
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pushd $mpi
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module load $mpi-%{_arch}
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ln -s ../configure .
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%configure %{configure_opts} \
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--libdir=%{_libdir}/$mpi/lib \
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--bindir=%{_libdir}/$mpi/bin \
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--sbindir=%{_libdir}/$mpi/sbin \
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--includedir=%{_includedir}/$mpi-%{_arch} \
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--datarootdir=%{_libdir}/$mpi/share \
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--mandir=%{_libdir}/$mpi/share/man \
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--enable-parallel-tests
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make %{?_smp_mflags}
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module purge
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popd
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done
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%install
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make install DESTDIR=${RPM_BUILD_ROOT}
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make -C build install DESTDIR=${RPM_BUILD_ROOT}
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/bin/rm -f ${RPM_BUILD_ROOT}%{_libdir}/*.la
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chrpath --delete ${RPM_BUILD_ROOT}/%{_bindir}/nc{copy,dump,gen,gen3}
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/bin/rm -f ${RPM_BUILD_ROOT}%{_infodir}/dir
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for mpi in %{mpi_list}
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do
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module load $mpi-%{_arch}
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make -C $mpi install DESTDIR=${RPM_BUILD_ROOT}
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rm $RPM_BUILD_ROOT/%{_libdir}/$mpi/lib/*.la
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chrpath --delete ${RPM_BUILD_ROOT}/%{_libdir}/$mpi/bin/nc{copy,dump,gen,gen3}
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module purge
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done
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%check
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make check
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make -C build check
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for mpi in mpich2 openmpi
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do
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module load $mpi-%{_arch}
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make -C $mpi check
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module purge
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done
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%clean
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@ -113,7 +255,6 @@ rm -rf ${RPM_BUILD_ROOT}
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%files
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%defattr(-,root,root,-)
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%doc COPYRIGHT README
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%{_bindir}/nccopy
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%{_bindir}/ncdump
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@ -123,7 +264,6 @@ rm -rf ${RPM_BUILD_ROOT}
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%{_mandir}/man1/*
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%files devel
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%defattr(-,root,root,-)
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%{_bindir}/nc-config
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%{_includedir}/netcdf.h
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%{_libdir}/*.so
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@ -131,11 +271,55 @@ rm -rf ${RPM_BUILD_ROOT}
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%{_mandir}/man3/*
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%files static
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%defattr(-,root,root,-)
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%{_libdir}/*.a
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%if %{with_mpich2}
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%files mpich2
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%doc COPYRIGHT README
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%{_libdir}/mpich2/bin/nccopy
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%{_libdir}/mpich2/bin/ncdump
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%{_libdir}/mpich2/bin/ncgen
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%{_libdir}/mpich2/bin/ncgen3
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%{_libdir}/mpich2/lib/*.so.*
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%doc %{_libdir}/mpich2/share/man/man1/*.1*
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%files mpich2-devel
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%{_libdir}/mpich2/bin/nc-config
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%{_includedir}/mpich2-%{_arch}
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%{_libdir}/mpich2/lib/*.so
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%{_libdir}/mpich2/lib/pkgconfig/%{name}.pc
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%doc %{_libdir}/mpich2/share/man/man3/*.3*
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%files mpich2-static
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%{_libdir}/mpich2/lib/*.a
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%endif
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%if %{with_openmpi}
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%files openmpi
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%doc COPYRIGHT README
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%{_libdir}/openmpi/bin/nccopy
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%{_libdir}/openmpi/bin/ncdump
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%{_libdir}/openmpi/bin/ncgen
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%{_libdir}/openmpi/bin/ncgen3
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%{_libdir}/openmpi/lib/*.so.*
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%doc %{_libdir}/openmpi/share/man/man1/*.1*
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%files openmpi-devel
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%{_libdir}/openmpi/bin/nc-config
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%{_includedir}/openmpi-%{_arch}
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%{_libdir}/openmpi/lib/*.so
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%{_libdir}/openmpi/lib/pkgconfig/%{name}.pc
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%doc %{_libdir}/openmpi/share/man/man3/*.3*
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%files openmpi-static
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%{_libdir}/openmpi/lib/*.a
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%endif
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%changelog
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* Wed Mar 7 2012 Orion Poplawski <orion@cora.nwra.com> - 4.2-0.3.rc2
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- Enable MPI builds
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* Tue Mar 6 2012 Orion Poplawski <orion@cora.nwra.com> - 4.2-0.2.rc2
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- Update to 4.2-rc2
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- Fortran and C++ APIs are now in separate packages
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