mmseq/mmseq-flags.patch
2011-10-07 16:13:42 +01:00

12 lines
382 B
Diff

--- mmseq_0.9.14/Makefile 2011-09-20 11:27:55.000000000 +0100
+++ mmseq_0.9.14.new/Makefile 2011-10-07 16:13:01.261226334 +0100
@@ -35,7 +35,7 @@
$(CXX) $(CXXFLAGS) -c sokal.cc
fasta.o : fasta.c fasta.h
- $(CC) -c fasta.c
+ $(CC) $(CXXFLAGS) -c fasta.c
bam2hits : fasta.o bam2hits.cpp
${CXX} ${MACROS} $(CXXFLAGS) -fopenmp -O3 fasta.o bam2hits.cpp -o bam2hits ${LIBS_B2H}