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Update docs and binaries to install and package and fix changelog

This commit is contained in:
Adam Huffman 2015-07-05 10:06:38 +01:00
parent 4bf0a424e9
commit e876d75e31
1 changed files with 27 additions and 11 deletions
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38
mmseq.spec
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@ -1,6 +1,6 @@
Name: mmseq
Version: 1.0.8a
Release: 2%{?dist}
Release: 3%{?dist}
Summary: Haplotype and isoform specific expression estimation for RNA-seq
Group: Applications/Engineering
@ -48,11 +48,18 @@ make %{?_smp_mflags} CXXFLAGS="%{optflags}"
rm -rf %{buildroot}
mkdir -p %{buildroot}%{_bindir}
install -p -m 0755 bam2hits %{buildroot}%{_bindir}
install -p -m 0755 mmseq %{buildroot}%{_bindir}
install -p -m 0755 *.sh %{buildroot}%{_bindir}
install -p -m 0755 *.rb %{buildroot}%{_bindir}
install -p -m 0755 ensembl_gtf_to_gff.pl %{buildroot}%{_bindir}
install -p -m 0755 bin/bam2hits %{buildroot}%{_bindir}
install -p -m 0755 bin/extract_transcripts %{buildroot}%{_bindir}
install -p -m 0755 bin/hitstools %{buildroot}%{_bindir}
install -p -m 0755 bin/mmcollapse %{buildroot}%{_bindir}
install -p -m 0755 bin/mmdiff %{buildroot}%{_bindir}
install -p -m 0755 bin/mmseq %{buildroot}%{_bindir}
install -p -m 0755 bin/offsetGTF %{buildroot}%{_bindir}
install -p -m 0755 bin/t2g_hits %{buildroot}%{_bindir}
install -p -m 0755 bin/*.sh %{buildroot}%{_bindir}
install -p -m 0755 bin/*.rb %{buildroot}%{_bindir}
install -p -m 0755 bin/ensembl_gtf_to_gff.pl %{buildroot}%{_bindir}
%clean
rm -rf %{buildroot}
@ -60,24 +67,33 @@ rm -rf %{buildroot}
%files
%defattr(-,root,root,-)
%doc AUTHORS COPYING
%doc README.md COPYING doc/
%{_bindir}/bam2hits
%{_bindir}/extract_transcripts
%{_bindir}/hitstools
%{_bindir}/mmcollapse
%{_bindir}/mmdiff
%{_bindir}/mmseq
%{_bindir}/offsetGTF
%{_bindir}/t2g_hits
%{_bindir}/fastagrep.sh
#%%{_bindir}/pileup.sh
%{_bindir}/routeB.sh
%{_bindir}/mouse_strain_transcriptome.sh
%{_bindir}/usage.sh
%{_bindir}/filterGTF.rb
#%%{_bindir}/get_isize.rb
%{_bindir}/haploref.rb
%{_bindir}/testregexp.rb
%{_bindir}/ensembl_gtf_to_gff.pl
%changelog
* Sun Jul 05 2015 Adam Huffman <bloch@verdurin.com> - 1.0.8a-3
- Update binaries and docs to install and package
- Fix changelog
* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.8a-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Sun Mar 01 2015 Adam Huffman <bloch@verdurin.com> - 1.0.8a
* Sun Mar 01 2015 Adam Huffman <bloch@verdurin.com> - 1.0.8a-1
- Update to new Github-based upstream release
- Add armadillo BR