diff --git a/mmseq-zlib.patch b/mmseq-zlib.patch index 27a3656..174d9f3 100644 --- a/mmseq-zlib.patch +++ b/mmseq-zlib.patch @@ -1,11 +1,11 @@ ---- mmseq_0.9.18/Makefile 2011-12-16 14:44:46.000000000 +0000 -+++ mmseq_0.9.18.new/Makefile 2012-01-11 15:03:03.091319510 +0000 +--- mmseq_0.9.18/src/Makefile 2011-12-16 14:44:46.000000000 +0000 ++++ mmseq_0.9.18.new/src/Makefile 2012-01-11 15:03:03.091319510 +0000 @@ -11,7 +11,7 @@ + CC = gcc CXX = g++ - LIBS = -lgsl -lgslcblas --LIBS_B2H = -lboost_regex -lbam -lz -+LIBS_B2H = -lboost_regex -lbam -Wl,--as-needed -lz +-LIBS = -lgsl -lgslcblas -lboost_regex -lbam -lboost_iostreams -lz -llapack -lblas -lgfortran ++LIBS = -lgsl -lgslcblas -lboost_regex -lbam -lboost_iostreams -llapack -lblas -lgfortran -Wl,--as-needed -lz OMP = -fopenmp OPT = -O3 - + OPTSAFE = -O2