Update to latest git

This commit is contained in:
Orion Poplawski 2020-06-25 20:02:16 -06:00
parent d624d7fdc6
commit 906d4e7096
3 changed files with 66 additions and 76 deletions

1
.gitignore vendored
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@ -13,3 +13,4 @@ gdl-0.9rc4.tar.gz
/gdl-0.9.8-git-d892ee5.tar.gz
/gdl-0.9.9.tar.gz
/gdl-0.9.9-git-2870075.tar.gz
/gdl-1.0.0-git-4892c96.tar.gz

139
gdl.spec
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@ -1,14 +1,15 @@
%global commit 287007567ba3998b4b70119025c3def86bdef649
%global commit 4892c96996d23a77c153737ace2d1f171938f560
%global shortcommit %(c=%{commit}; echo ${c:0:7})
%global __cmake_in_source_build 1
Name: gdl
Version: 0.9.9
Release: 20.20190915git%{shortcommit}%{?dist}
Version: 1.0.0
Release: 0.1.20210123git%{shortcommit}%{?dist}
Summary: GNU Data Language
License: GPLv2+
URL: http://gnudatalanguage.sourceforge.net/
#Source0: https://github.com/gnudatalanguage/gdl/archive/v%{version}/gdl-%{version}.tar.gz
#Source0: https://github.com/gnudatalanguage/gdl/archive/v%{version}-rc.3/gdl-%{version}-rc.3.tar.gz
Source0: https://github.com/gnudatalanguage/gdl/archive/%{commit}/gdl-%{version}-git-%{shortcommit}.tar.gz
Source1: gdl.csh
Source2: gdl.sh
@ -16,12 +17,15 @@ Source4: xorg.conf
# Build with system antlr library. Request for upstream change here:
# https://sourceforge.net/tracker/index.php?func=detail&aid=2685215&group_id=97659&atid=618686
Patch1: gdl-antlr.patch
# Support python3
# https://github.com/gnudatalanguage/gdl/pull/468
Patch2: gdl-python3.patch
# Fix multiple template instantiations with include guard
Patch2: gdl-guard.patch
# Fix conflict with std::vector and ALTIVEC vector
# https://github.com/gnudatalanguage/gdl/pull/535
Patch4: gdl-std.patch
#Patch4: gdl-std.patch
# Build fails on armv7hl
# https://bugzilla.redhat.com/show_bug.cgi?id=1919680
ExcludeArch: armv7hl
%if 0%{?fedora} || 0%{?rhel} >= 7
BuildRequires: gcc-c++
@ -33,16 +37,31 @@ BuildRequires: java-devel
BuildRequires: antlr
BuildRequires: java
%endif
BuildRequires: expat-devel, readline-devel, ncurses-devel
BuildRequires: gsl-devel, plplot-devel, GraphicsMagick-c++-devel
BuildRequires: netcdf-devel, hdf5-devel, libjpeg-devel
%if 0%{?fedora} || 0%{?rhel} >= 8
BuildRequires: python%{python3_pkgversion}-devel, python%{python3_pkgversion}-numpy, python%{python3_pkgversion}-matplotlib
%else
BuildRequires: python2-devel, python2-numpy, python2-matplotlib
%endif
BuildRequires: eigen3-static
BuildRequires: expat-devel
BuildRequires: fftw-devel
BuildRequires: glpk-devel
BuildRequires: GraphicsMagick-c++-devel
BuildRequires: gsl-devel
BuildRequires: hdf-static
BuildRequires: hdf5-devel
BuildRequires: libgeotiff-devel
BuildRequires: libjpeg-devel
BuildRequires: libtiff-devel
BuildRequires: libtirpc-devel
BuildRequires: ncurses-devel
BuildRequires: netcdf-devel
BuildRequires: plplot-devel
BuildRequires: proj-devel
BuildRequires: pslib-devel
BuildRequires: python%{python3_pkgversion}-devel
BuildRequires: python%{python3_pkgversion}-numpy
BuildRequires: python%{python3_pkgversion}-matplotlib
BuildRequires: readline-devel
# Not yet possible to build with external dSFMT
#BuildRequires: dSFMT-devel
Provides: bundled(dSFMT)
BuildRequires: shapelib-devel
BuildRequires: fftw-devel, hdf-static
%if 0%{?fedora} || 0%{?rhel} >= 8
# eccodes not available on these arches
%ifnarch i686 ppc64 s390x armv7hl aarch64
@ -58,17 +77,11 @@ BuildRequires: eccodes-devel
BuildRequires: grib_api-static
%endif
%endif
BuildRequires: eigen3-static
BuildRequires: libgeotiff-devel
BuildRequires: libtiff-devel
BuildRequires: libtirpc-devel
#TODO - Build with mpi support
#BuildRequires: mpich2-devel
BuildRequires: pslib-devel
# qhull too old on Fedora 24 and EPEL7
%if 0%{?fedora} || 0%{?rhel} >= 8
BuildRequires: qhull-devel
%global cmake_qhull -DQHULL=ON
%endif
BuildRequires: udunits2-devel
BuildRequires: wxGTK3-devel
@ -82,6 +95,12 @@ BuildRequires: metacity
BuildRequires: make
# Needed to pull in drivers
Requires: plplot
%if 0%{?fedora} || 0%{?rhel} >= 8
# Widgets use wx
Recommends: plplot-wxGTK
%else
Requires: plplot-wxGTK
%endif
Requires: %{name}-common = %{version}-%{release}
Provides: %{name}-runtime = %{version}-%{release}
# Need to match hdf5 compile time version
@ -103,7 +122,6 @@ BuildArch: noarch
Common files for GDL
%if 0%{?fedora} >= 29 || 0%{?rhel} >= 8
%package -n python%{python3_pkgversion}-gdl
%{?python_provide:%python_provide python%{python3_pkgversion}-gdl}
# Remove before F30
@ -118,30 +136,16 @@ Provides: %{name}-runtime = %{version}-%{release}
%description -n python%{python3_pkgversion}-gdl
%{summary}.
%else
%package -n python2-gdl
%{?python_provide:%python_provide python2-gdl}
# Remove before F30
Provides: %{name}-python = %{version}-%{release}
Provides: %{name}-python%{?_isa} = %{version}-%{release}
Obsoletes: %{name}-python < %{version}-%{release}
Summary: GDL python module
# Needed to pull in drivers
Requires: plplot
Requires: %{name}-common = %{version}-%{release}
Provides: %{name}-runtime = %{version}-%{release}
%description -n python2-gdl
%{summary}.
%endif
%prep
%setup -q -n %{name}-%{commit}
%setup -q -n gdl-%{commit}
rm -rf src/antlr
# Not yet possible to build with external dSFMT
#rm -r src/dSFMT
%patch1 -p1 -b .antlr
%patch2 -p1 -b .python3
%patch4 -p1 -b .std
#patch2 -p1 -b .guard
#patch4 -p1 -b .std
pushd src
for f in *.g
@ -150,18 +154,11 @@ do
done
popd
%if 0%{?fedora} >= 29 || 0%{?rhel} >= 8
%global __python %{__python3}
%global python_sitearch %{python3_sitearch}
%else
%global __python %{__python2}
%global python_sitearch %{python2_sitearch}
%endif
%global cmake_opts \\\
-DWXWIDGETS=ON \\\
-DGEOTIFF_INCLUDE_DIR=%{_includedir}/libgeotiff \\\
-DUDUNITS=ON \\\
-DUDUNITS_INCLUDE_DIR=%{_includedir}/udunits2 \\\
-DGRIB=ON \\\
-DOPENMP=ON \\\
-DPYTHON_EXECUTABLE=%{__python} \\\
@ -172,6 +169,7 @@ popd
# --with-mpich=%{_libdir}/mpich2 \
%build
export CXXFLAGS="%optflags -fcommon"
mkdir build build-python
#Build the standalone executable
pushd build
@ -193,7 +191,7 @@ pushd build-python
%make_install
# Install the python module in the right location
install -d -m 0755 $RPM_BUILD_ROOT/%{python_sitearch}
%if 0%{?fedora} >= 29 || 0%{?rhel} >= 8
%if 0%{?fedora} || 0%{?rhel} >= 8
%if "%{_lib}" != "lib"
mv $RPM_BUILD_ROOT%{_prefix}/lib/python*/site-packages/GDL.so \
$RPM_BUILD_ROOT%{python_sitearch}/GDL.so
@ -228,34 +226,27 @@ export DISPLAY=:99
metacity &
sleep 2
# bytscl - https://github.com/gnudatalanguage/gdl/issues/159
# device - Failed on EL7
# fft_leak - https://github.com/gnudatalanguage/gdl/issues/147
# file_delete - https://github.com/gnudatalanguage/gdl/issues/148
# file_delete - EL7 only ? https://github.com/gnudatalanguage/gdl/issues/148
# file_test - https://github.com/gnudatalanguage/gdl/issues/534
# fix - https://github.com/gnudatalanguage/gdl/issues/149
# formats - https://github.com/gnudatalanguage/gdl/issues/144
# formats - EL7 only ? https://github.com/gnudatalanguage/gdl/issues/144
# get_screen_size - Failed on EL7
# n_tags - https://github.com/gnudatalanguage/gdl/issues/150
# parse_url - https://github.com/gnudatalanguage/gdl/issues/153
# resolve_routine - https://github.com/gnudatalanguage/gdl/issues/146
# rounding - https://github.com/gnudatalanguage/gdl/issues/154
# total - https://github.com/gnudatalanguage/gdl/issues/155
failing_tests='test_(bytscl|device|fft_leak|file_(delete|test)|finite|fix|formats|get_screen_size|idlneturl|make_dll|n_tags|parse_url|resolve_routine|rounding|total|wait)'
%ifarch aarch64 ppc %{power64}
# idlneturl - Requires network
# make_dll - Windows specific
failing_tests='test_(fft_leak|file_(delete|test)|formats|get_screen_size|idlneturl|make_dll)'
%ifarch aarch64 %{power64}
# test_fix fails currently on arm
# https://sourceforge.net/p/gnudatalanguage/bugs/622/
# https://bugzilla.redhat.com/show_bug.cgi?id=990749
failing_tests="$failing_tests|test_(fix|hdf5)"
%endif
%ifarch aarch64
# new test failues - indgen, list - https://github.com/gnudatalanguage/gdl/issues/372
# Bug tests hang on F28
failing_tests="$failing_tests|test_(bug_(3104209|3104326|3147733)|file_lines|indgen|list|l64|step|xdr)"
failing_tests="$failing_tests|test_(bug_(3104209|3104326|3147733)|byte_conversion|bytscl|fix|step)"
%endif
%ifarch %{arm}
# These fail on 32-bit: test_formats test_xdr
failing_tests="$failing_tests|test_(file_lines|fix|formats|hdf5|indgen|list|l64|xdr)"
failing_tests="$failing_tests|test_(file_lines|fix|formats|hdf5|xdr)"
%endif
%ifarch %{ix86}
# binfmt - https://github.com/gnudatalanguage/gdl/issues/332
@ -263,15 +254,14 @@ failing_tests="$failing_tests|test_(file_lines|fix|formats|hdf5|indgen|list|l64|
failing_tests="$failing_tests|test_(formats|l64|sem|xdr)"
%endif
%ifarch ppc64
# new test failues - indgen, list - https://github.com/gnudatalanguage/gdl/issues/372
failing_tests="$failing_tests|test_(bug_(635|3104209|3147733)|file_lines|indgen|list|save_restore|window_background)"
failing_tests="$failing_tests|test_(bug_(635|3104209|3147733)|file_lines|save_restore|window_background)"
%endif
%ifarch ppc64le
# ppc64le - test_file_lines https://github.com/gnudatalanguage/gdl/issues/373
failing_tests="$failing_tests|test_(angles|bug_(3104209|3104326)|container|file_lines|hdf5|hist_2d|indgen|list|random)"
failing_tests="$failing_tests|test_(bug_(3104209|3104326)|byte_conversion|bytscl|container|file_lines|finite|fix|random|rounding)"
%endif
%ifarch s390x
failing_tests="$failing_tests|test_(bug_635|deriv|file_lines|hdf5|indgen|list|save_restore|tic_toc|window_background)"
failing_tests="$failing_tests|test_(bug_635|byte_conversion|bytsc|deriv|file_lines|hdf5|image_statistics|save_restore|sort|tic_toc|window_background)"
%endif
make check VERBOSE=1 ARGS="-V -E '$failing_tests'"
%ifnarch ppc64 s390x
@ -285,7 +275,7 @@ cat xorg.log
%files
%license COPYING
%doc AUTHORS ChangeLog HACKING NEWS README
%doc AUTHORS HACKING NEWS README
%config(noreplace) %{_sysconfdir}/profile.d/gdl.*sh
%{_bindir}/gdl
%{_mandir}/man1/gdl.1*
@ -293,15 +283,14 @@ cat xorg.log
%files common
%{_datadir}/gnudatalanguage/
%if 0%{?fedora} >= 29 || 0%{?rhel} >= 8
%files -n python%{python3_pkgversion}-gdl
%else
%files -n python2-gdl
%endif
%{python_sitearch}/GDL.so
%changelog
* Sun Jan 24 2021 Orion Poplawski <orion@nwra.com> - 1.0.0-0.1.20210123git4892c96
- Update to latest git
* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.9.9-20.20190915git2870075
- Second attempt - Rebuilt for
https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

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@ -1 +1 @@
SHA512 (gdl-0.9.9-git-2870075.tar.gz) = f23519a1981d9d8b876220cc2d2d4568edada963242d8a6c94f543f83e35af1b36dadf75ddbae772b62bc0d8714fcdb144e562777867091702aaff8dd476d1d5
SHA512 (gdl-1.0.0-git-4892c96.tar.gz) = 3649802bcf35e338bc92ae9cc8fc2bff49e2e5775f702db76809d5506fba3c11fb0440f7371131d940cc079c828bdb92d76dc76b3a2c0ed549412a343e40510b