271 lines
7.7 KiB
RPMSpec
271 lines
7.7 KiB
RPMSpec
# Enabled by default
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%bcond_without tests
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%if 0%{?fedora} < 33
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%undefine __cmake_in_source_build
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%endif
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Name: gdcm
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Version: 3.0.9
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Release: %autorelease
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Summary: Grassroots DiCoM is a C++ library to parse DICOM medical files
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License: BSD
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URL: http://gdcm.sourceforge.net/wiki/index.php/Main_Page
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# Use github release
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Source0: https://github.com/malaterre/%{name}/archive/v%{version}/%{name}-%{version}.tar.gz
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Source1: http://downloads.sourceforge.net/project/gdcm/gdcmData/gdcmData/gdcmData.tar.gz
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Patch1: 0001-3.0.1-Use-copyright.patch
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# Fix for 1687233
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Patch3: 0002-Fix-export-variables.patch
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Patch4: 0003-Fix-missing-include-for-gcc-11.patch
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BuildRequires: CharLS-devel >= 2.0
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BuildRequires: cmake
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BuildRequires: doxygen
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BuildRequires: libxslt-devel
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BuildRequires: dcmtk-devel
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BuildRequires: docbook5-style-xsl
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BuildRequires: docbook-style-xsl
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BuildRequires: expat-devel
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BuildRequires: fontconfig-devel
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BuildRequires: gcc
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BuildRequires: gcc-c++
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BuildRequires: git-core
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BuildRequires: graphviz
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BuildRequires: gl2ps-devel
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BuildRequires: libogg-devel
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BuildRequires: libtheora-devel
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BuildRequires: libuuid-devel
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BuildRequires: mesa-libOSMesa-devel
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BuildRequires: openssl-devel
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BuildRequires: pkgconfig(libopenjp2)
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BuildRequires: poppler-devel
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BuildRequires: python3-devel
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BuildRequires: swig
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BuildRequires: sqlite-devel
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BuildRequires: json-c-devel
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BuildRequires: libxml2-devel
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BuildRequires: make
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# BuildRequires: vtk-devel
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# Do not generate latex
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# BuildRequires: /usr/bin/latex
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# BuildRequires: /usr/bin/pdflatex
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# BuildRequires: /usr/bin/dvips
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# BuildRequires: /usr/bin/epstopdf
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#BuildRequires: texlive-ec
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%description
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Grassroots DiCoM (GDCM) is a C++ library for DICOM medical files.
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It supports ACR-NEMA version 1 and 2 (huffman compression is not supported),
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RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax.
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It comes with a super fast scanner implementation to quickly scan hundreds of
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DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE,
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C-MOVE). PS 3.3 & 3.6 are distributed as XML files.
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It also provides PS 3.15 certificates and password based mechanism to
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anonymize and de-identify DICOM datasets.
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%package doc
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Summary: Includes html documentation for gdcm
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BuildArch: noarch
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%description doc
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You should install the gdcm-doc package if you would like to
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access upstream documentation for gdcm.
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%package applications
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Summary: Includes command line programs for GDCM
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Requires: %{name}%{?_isa} = %{version}-%{release}
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%description applications
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You should install the gdcm-applications package if you would like to
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use command line programs part of GDCM. Includes tools to convert,
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anonymize, manipulate, concatenate, and view DICOM files.
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%package devel
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Summary: Libraries and headers for GDCM
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Requires: %{name}%{?_isa} = %{version}-%{release}
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Requires: %{name}-applications%{?_isa} = %{version}-%{release}
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%description devel
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You should install the gdcm-devel package if you would like to
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compile applications based on gdcm
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%package examples
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Summary: CSharp, C++, Java, PHP and Python example programs for GDCM
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Requires: %{name}%{?_isa} = %{version}-%{release}
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%description examples
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GDCM examples
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%package -n python3-gdcm
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Summary: Python binding for GDCM
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%{?python_provide:%python_provide python3-gdcm}
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Requires: %{name}%{?_isa} = %{version}-%{release}
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%description -n python3-gdcm
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You should install the python3-gdcm package if you would like to
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used this library with python
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%prep
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%autosetup -n GDCM-%{version} -S git
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# Data source
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%setup -n GDCM-%{version} -q -T -D -a 1
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# Fix cmake command
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sed -i.backup 's/add_dependency/add_dependencies/' Utilities/doxygen/CMakeLists.txt
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# Stop doxygen from producing LaTeX output
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sed -i.backup 's/^GENERATE_LATEX.*=.*YES/GENERATE_LATEX = NO/' Utilities/doxygen/doxyfile.in
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# Remove bundled utilities (we use Fedora's ones)
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rm -rf Utilities/gdcmexpat
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rm -rf Utilities/gdcmopenjpeg-v1
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rm -rf Utilities/gdcmopenjpeg-v2
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rm -rf Utilities/gdcmzlib
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rm -rf Utilities/gdcmuuid
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rm -rf Utilities/gdcmcharls
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# Remove bundled utilities (we don't use them)
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rm -rf Utilities/getopt
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rm -rf Utilities/pvrg
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rm -rf Utilities/rle
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rm -rf Utilities/wxWidgets
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# Needed for testing:
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#rm -rf Utilities/gdcmmd5
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%build
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%cmake .. \
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-DCMAKE_VERBOSE_MAKEFILE=ON \
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-DGDCM_INSTALL_PACKAGE_DIR=%{_libdir}/cmake/%{name} \
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-DGDCM_INSTALL_INCLUDE_DIR=%{_includedir}/%{name} \
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-DGDCM_INSTALL_DOC_DIR=%{_docdir}/%{name} \
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-DGDCM_INSTALL_MAN_DIR=%{_mandir} \
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-DGDCM_INSTALL_LIB_DIR=%{_libdir} \
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-DGDCM_BUILD_TESTING:BOOL=ON \
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-DGDCM_DATA_ROOT=../gdcmData/ \
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-DGDCM_BUILD_EXAMPLES:BOOL=OFF \
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-DGDCM_DOCUMENTATION:BOOL=OFF \
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-DGDCM_WRAP_PYTHON:BOOL=ON \
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-DPYTHON_EXECUTABLE=%{__python3} \
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-DGDCM_INSTALL_PYTHONMODULE_DIR=%{python3_sitearch} \
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-DGDCM_WRAP_JAVA:BOOL=OFF \
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-DGDCM_WRAP_CSHARP:BOOL=OFF \
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-DGDCM_BUILD_SHARED_LIBS:BOOL=ON \
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-DGDCM_BUILD_APPLICATIONS:BOOL=ON \
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-DCMAKE_BUILD_TYPE:STRING="RelWithDebInfo" \
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-DGDCM_USE_VTK:BOOL=OFF \
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-DGDCM_USE_SYSTEM_CHARLS:BOOL=ON \
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-DGDCM_USE_SYSTEM_EXPAT:BOOL=ON \
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-DGDCM_USE_SYSTEM_OPENJPEG:BOOL=ON \
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-DGDCM_USE_SYSTEM_ZLIB:BOOL=ON \
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-DGDCM_USE_SYSTEM_UUID:BOOL=ON \
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-DGDCM_USE_SYSTEM_LJPEG:BOOL=OFF \
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-DGDCM_USE_SYSTEM_OPENSSL:BOOL=ON \
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-DGDCM_USE_JPEGLS:BOOL=ON \
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-DGDCM_USE_SYSTEM_LIBXML2:BOOL=ON \
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-DGDCM_USE_SYSTEM_JSON:BOOL=ON \
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-DGDCM_USE_SYSTEM_POPPLER:BOOL=ON
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#Cannot build wrap_java:
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# -DGDCM_VTK_JAVA_JAR:PATH=/usr/share/java/vtk.jar no found!
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# yum provides */vtk.jar -> No results found
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%cmake_build
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%install
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%cmake_install
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install -d $RPM_BUILD_ROOT%{python3_sitearch}
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# Install examples
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install -d $RPM_BUILD_ROOT/%{_datadir}/%{name}/Examples/
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cp -rv ./Examples/* $RPM_BUILD_ROOT/%{_datadir}/%{name}/Examples/
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%if %{with tests}
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%check
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# Making the tests informative only for now. Several failing tests (27/228):
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# 11,40,48,49,107-109,111-114,130-135,146,149,,151-154,157,194,216,219
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make test -C %{__cmake_builddir} || exit 0
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%endif
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%files
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%doc AUTHORS README.md
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%license Copyright.txt README.Copyright.txt
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%{_libdir}/libgdcmCommon.so.3.0
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%{_libdir}/libgdcmCommon.so.3.0.9
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%{_libdir}/libgdcmDICT.so.3.0
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%{_libdir}/libgdcmDICT.so.3.0.9
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%{_libdir}/libgdcmDSED.so.3.0
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%{_libdir}/libgdcmDSED.so.3.0.9
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%{_libdir}/libgdcmIOD.so.3.0
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%{_libdir}/libgdcmIOD.so.3.0.9
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%{_libdir}/libgdcmMEXD.so.3.0
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%{_libdir}/libgdcmMEXD.so.3.0.9
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%{_libdir}/libgdcmMSFF.so.3.0
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%{_libdir}/libgdcmMSFF.so.3.0.9
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%{_libdir}/libgdcmjpeg12.so.3.0
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%{_libdir}/libgdcmjpeg12.so.3.0.9
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%{_libdir}/libgdcmjpeg16.so.3.0
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%{_libdir}/libgdcmjpeg16.so.3.0.9
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%{_libdir}/libgdcmjpeg8.so.3.0
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%{_libdir}/libgdcmjpeg8.so.3.0.9
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%{_libdir}/libgdcmmd5.so.3.0
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%{_libdir}/libgdcmmd5.so.3.0.9
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%{_libdir}/libsocketxx.so.1.2
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%{_libdir}/libsocketxx.so.1.2.0
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%dir %{_datadir}/%{name}
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%{_datadir}/%{name}-3.0/XML/
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%exclude %{_docdir}/%{name}/html/
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%exclude %{_docdir}/%{name}/Examples/
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%files doc
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#doc %{_docdir}/%{name}/html/
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%files applications
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%{_bindir}/gdcmanon
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%{_bindir}/gdcmconv
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%{_bindir}/gdcmdiff
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%{_bindir}/gdcmdump
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%{_bindir}/gdcmgendir
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%{_bindir}/gdcmimg
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%{_bindir}/gdcminfo
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%{_bindir}/gdcmpap3
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%{_bindir}/gdcmpdf
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%{_bindir}/gdcmraw
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%{_bindir}/gdcmscanner
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%{_bindir}/gdcmscu
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%{_bindir}/gdcmtar
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%{_bindir}/gdcmxml
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%doc %{_mandir}/man1/*.1*
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%files devel
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%{_includedir}/%{name}/
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%{_libdir}/libgdcmCommon.so
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%{_libdir}/libgdcmDICT.so
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%{_libdir}/libgdcmDSED.so
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%{_libdir}/libgdcmIOD.so
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%{_libdir}/libgdcmMEXD.so
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%{_libdir}/libgdcmMSFF.so
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%{_libdir}/libgdcmjpeg12.so
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%{_libdir}/libgdcmjpeg16.so
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%{_libdir}/libgdcmjpeg8.so
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%{_libdir}/libgdcmmd5.so
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%{_libdir}/libsocketxx.so
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%{_libdir}/cmake/%{name}/
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%files examples
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%{_datadir}/%{name}/Examples/
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%files -n python3-gdcm
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%{python3_sitearch}/%{name}*.py
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%{python3_sitearch}/_%{name}swig.so
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%{python3_sitearch}/__pycache__/%{name}*
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%changelog
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%autochangelog
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