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Really unbundle lapack.

This commit is contained in:
Susi Lehtola 2015-02-08 05:49:45 +01:00
parent ce75bd4e22
commit 36b85772cc
3 changed files with 71 additions and 38 deletions
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17
atlas.3.10.1-unbundle.patch Normal file
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@ -0,0 +1,17 @@
diff -up wrk/makes/Make.lib.wrk wrk/makes/Make.lib
--- wrk/makes/Make.lib.wrk 2015-01-23 21:14:46.465494411 +0100
+++ wrk/makes/Make.lib 2015-01-23 22:48:39.632479588 +0100
@@ -185,11 +185,11 @@ TRYALL :
#
fat_ptshared : # threaded target
$(MAKE) TRYALL outso=libtatlas.so \
- libas="libptlapack.a libptf77blas.a libptcblas.a libatlas.a" \
+ libas="libptlapack.a libptf77blas.a libptcblas.a libatlas.a $(SLAPACKlib)" \
LIBINSTdir="$(LIBINSTdir)"
fat_shared : # serial target
$(MAKE) TRYALL outso=libsatlas.so \
- libas="liblapack.a libf77blas.a libcblas.a libatlas.a" \
+ libas="liblapack.a libf77blas.a libcblas.a libatlas.a $(SLAPACKlib)" \
LIBINSTdir="$(LIBINSTdir)"
#
# Builds shared lib, not include fortran codes from LAPACK

91
atlas.spec
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@ -5,7 +5,7 @@ Version: 3.10.1
%if "%{?enable_native_atlas}" != "0"
%define dist .native
%endif
Release: 17%{?dist}
Release: 18%{?dist}
Summary: Automatically Tuned Linear Algebra Software
Group: System Environment/Libraries
@ -15,13 +15,12 @@ Source0: http://downloads.sourceforge.net/math-atlas/%{name}%{version}.ta
Source1: PPRO32.tgz
#Source2: K7323DNow.tgz
Source3: README.dist
#Source4: USII64.tgz
#Source5: USII32.tgz
#Source4: USII64.tgz
#Source5: USII32.tgz
#Source6: IBMz1032.tgz
#Source7: IBMz1064.tgz
#Source8: IBMz19632.tgz
#Source9: IBMz19664.tgz
Source10: http://www.netlib.org/lapack/lapack-3.5.0.tgz
#archdefs taken from debian:
Source11: POWER332.tar.bz2
Source12: IBMz932.tar.bz2
@ -43,6 +42,7 @@ Patch6: atlas-affinity.patch
Patch7: atlas-aarch64port.patch
Patch8: atlas-genparse.patch
Patch9: atlas.3.10.1-unbundle.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
@ -55,8 +55,7 @@ Patch100: ppc64le-abiv2.patch
Patch110: p8-mem-barrier.patch
BuildRequires: gcc-gfortran
Provides: bundled(lapack)
BuildRequires: lapack-static
%ifarch x86_64
Obsoletes: atlas-sse3 < 3.10
@ -182,7 +181,7 @@ Requires(preun): chkconfig
%description sse2-static
This package contains ATLAS (Automatically Tuned Linear Algebra Software)
static libraries compiled with optimizations for the SSE2 extensions to the
static libraries compiled with optimizations for the SSE2 extensions to the
ix86 architecture.
@ -216,13 +215,13 @@ Requires(preun): chkconfig
%description sse3-static
This package contains ATLAS (Automatically Tuned Linear Algebra Software)
static libraries compiled with optimizations for the SSE3 extensions to the
static libraries compiled with optimizations for the SSE3 extensions to the
ix86 architecture.
%endif
%ifarch s390 s390x
%define types base
%define types base
#z196
#z10
@ -297,7 +296,7 @@ ix86 architecture.
%ifarch %{arm}
#beware - arch constant can change between releases
%define arch_option -A 46
%define arch_option -A 46
%define threads_option -t 2
%global armflags -DATL_ARM_HARDFP=1
%global mode %{nil}
@ -305,7 +304,7 @@ ix86 architecture.
%global mode -b %{__isa_bits}
%global armflags %{nil}
%if "%{?enable_native_atlas}" == "0"
%define threads_option -t 4
%define threads_option -t 4
%endif
%endif
@ -332,6 +331,7 @@ ix86 architecture.
%patch7 -p1 -b .aarch64
%endif
%patch8 -p1 -b .genparse
%patch9 -p1 -b .unbundle
cp %{SOURCE1} CONFIG/ARCHS/
#cp %{SOURCE2} CONFIG/ARCHS/
@ -362,8 +362,19 @@ sed -i -e 's,-mfpu=vfpv3,,' tune/blas/gemm/CASES/*.flg
# Debug
#sed -i -e 's,> \(.*\)/ptsanity.out,> \1/ptsanity.out || cat \1/ptsanity.out \&\& exit 1,' makes/Make.*
# Generate lapack library
mkdir lapacklib
cd lapacklib
ar x %{_libdir}/liblapack_pic.a
# Remove functions that have ATLAS implementations
rm cgelqf.o cgels.o cgeqlf.o cgeqrf.o cgerqf.o cgesv.o cgetrf.o cgetri.o cgetrs.o clarfb.o clarft.o clauum.o cposv.o cpotrf.o cpotri.o cpotrs.o ctrtri.o dgelqf.o dgels.o dgeqlf.o dgeqrf.o dgerqf.o dgesv.o dgetrf.o dgetri.o dgetrs.o dlamch.o dlarfb.o dlarft.o dlauum.o dposv.o dpotrf.o dpotri.o dpotrs.o dtrtri.o ieeeck.o ilaenv.o lsame.o sgelqf.o sgels.o sgeqlf.o sgeqrf.o sgerqf.o sgesv.o sgetrf.o sgetri.o sgetrs.o slamch.o slarfb.o slarft.o slauum.o sposv.o spotrf.o spotri.o spotrs.o strtri.o xerbla.o zgelqf.o zgels.o zgeqlf.o zgeqrf.o zgerqf.o zgesv.o zgetrf.o zgetri.o zgetrs.o zlarfb.o zlarft.o zlauum.o zposv.o zpotrf.o zpotri.o zpotrs.o ztrtri.o
# Create new library
ar rcs ../liblapack_pic_pruned.a *.o
cd ..
%build
p=$(pwd)
for type in %{types}; do
if [ "$type" = "base" ]; then
libname=atlas
@ -377,8 +388,11 @@ for type in %{types}; do
../configure %{mode} %{?threads_option} %{?arch_option} -D c -DWALL -Fa alg '%{armflags} -g -Wa,--noexecstack -fPIC'\
--prefix=%{buildroot}%{_prefix} \
--incdir=%{buildroot}%{_includedir} \
--libdir=%{buildroot}%{_libdir}/${libname} \
--with-netlib-lapack-tarfile=%{SOURCE10}
--libdir=%{buildroot}%{_libdir}/${libname}
#--with-netlib-lapack-tarfile=%{SOURCE10}
#matches both SLAPACK and SSLAPACK
sed -i "s#SLAPACKlib.*#SLAPACKlib = ${p}/liblapack_pic_pruned.a#" Make.inc
%if "%{?enable_native_atlas}" == "0"
%ifarch x86_64
@ -386,18 +400,18 @@ for type in %{types}; do
# sed -i 's#ARCH =.*#ARCH = HAMMER64SSE2#' Make.inc
sed -i 's#ARCH =.*#ARCH = HAMMER64SSE3#' Make.inc
# sed -i 's#-DATL_SSE3##' Make.inc
sed -i 's#-DATL_AVX##' Make.inc
# sed -i 's#-msse3#-msse2#' Make.inc
sed -i 's#-DATL_AVX##' Make.inc
# sed -i 's#-msse3#-msse2#' Make.inc
sed -i 's#-mavx#-msse3#' Make.inc
echo 'base makefile edited'
# sed -i 's#PMAKE = $(MAKE) .*#PMAKE = $(MAKE) -j 1#' Make.inc
echo 'base makefile edited'
# sed -i 's#PMAKE = $(MAKE) .*#PMAKE = $(MAKE) -j 1#' Make.inc
elif [ "$type" = "sse3" ]; then
# sed -i 's#ARCH =.*#ARCH = Corei264AVX#' Make.inc
# sed -i 's#PMAKE = $(MAKE) .*#PMAKE = $(MAKE) -j 1#' Make.inc
sed -i 's#-DATL_AVX##' Make.inc
sed -i 's#-DATL_SSE2##' Make.inc
sed -i 's#-mavx#-msse2#' Make.inc
sed -i 's#-msse3#-msse2#' Make.inc
sed -i 's#-mavx#-msse2#' Make.inc
sed -i 's#-msse3#-msse2#' Make.inc
echo 'sse makefile edited'
%define pr_sse3 %(echo $((%{__isa_bits}+4)))
fi
@ -409,18 +423,18 @@ for type in %{types}; do
#sed -i 's#-DATL_SSE3 -DATL_SSE2 -DATL_SSE1##' Make.inc
sed -i 's#-DATL_SSE3##' Make.inc
sed -i 's#-DATL_SSE2##' Make.inc
sed -i 's#-DATL_SSE1##' Make.inc
sed -i 's#-mfpmath=sse -msse3#-mfpmath=387#' Make.inc
sed -i 's#-DATL_SSE1##' Make.inc
sed -i 's#-mfpmath=sse -msse3#-mfpmath=387#' Make.inc
elif [ "$type" = "sse" ]; then
sed -i 's#ARCH =.*#ARCH = PIII32SSE1#' Make.inc
sed -i 's#-DATL_SSE3#-DATL_SSE1#' Make.inc
sed -i 's#-msse3#-msse#' Make.inc
sed -i 's#-DATL_SSE3#-DATL_SSE1#' Make.inc
sed -i 's#-msse3#-msse#' Make.inc
%define pr_sse %(echo $((%{__isa_bits}+2)))
elif [ "$type" = "sse2" ]; then
# sed -i 's#ARCH =.*#ARCH = P432SSE2#' Make.inc
sed -i 's#ARCH =.*#ARCH = x86SSE232SSE2#' Make.inc
sed -i 's#-DATL_SSE3#-DATL_SSE2#' Make.inc
sed -i 's#-msse3#-msse2#' Make.inc
sed -i 's#-DATL_SSE3#-DATL_SSE2#' Make.inc
sed -i 's#-msse3#-msse2#' Make.inc
%define pr_sse2 %(echo $((%{__isa_bits}+3)))
elif [ "$type" = "sse3" ]; then
sed -i 's#ARCH =.*#ARCH = P4E32SSE3#' Make.inc
@ -433,10 +447,10 @@ for type in %{types}; do
# we also need a compiler with -march=z196 support
# the base support will use z196 tuning
if [ "$type" = "base" ]; then
%ifarch s390x
%ifarch s390x
sed -i 's#ARCH =.*#ARCH = IBMz964#' Make.inc
%endif
%ifarch s390
%ifarch s390
sed -i 's#ARCH =.*#ARCH = IBMz932#' Make.inc
%endif
sed -i 's#-march=z196#-march=z9-109 -mtune=z196#' Make.inc
@ -446,12 +460,12 @@ for type in %{types}; do
sed -i 's#-DATL_ARCH_IBMz10#-DATL_ARCH_IBMz9#' Make.inc
# sed -i 's#-DATL_ARCH_IBMz9#-DATL_ARCH_IBMz9#' Make.inc
elif [ "$type" = "z10" ]; then
%ifarch s390x
%ifarch s390x
# cat Make.inc | grep "ARCH ="
sed -i 's#ARCH =.*#ARCH = IBMz1064#' Make.inc
%endif
%ifarch s390
%ifarch s390
sed -i 's#ARCH =.*#ARCH = IBMz1032#' Make.inc
# cat Make.inc | grep "ARCH ="
%endif
@ -463,10 +477,10 @@ for type in %{types}; do
%define pr_z10 %(echo $((%{__isa_bits}+1)))
elif [ "$type" = "z196" ]; then
%ifarch s390x
%ifarch s390x
sed -i 's#ARCH =.*#ARCH = IBMz19664#' Make.inc
%endif
%ifarch s390
%ifarch s390
sed -i 's#ARCH =.*#ARCH = IBMz19632#' Make.inc
%endif
sed -i 's#-march=z196#-march=z10 -mtune=z196#' Make.inc
@ -504,7 +518,7 @@ for type in %{types}; do
popd
done
%install
%install
for type in %{types}; do
pushd %{_arch}_${type}
make DESTDIR=%{buildroot} install
@ -848,6 +862,9 @@ fi
%endif
%changelog
* Sat Feb 07 2015 Susi Lehtola <jussilehtola@fedoraproject.org> - 3.10.1-18
- Really do the unbundling of lapack.
* Mon Feb 02 2015 Frantisek Kluknavsky <fkluknav@redhat.com> - 3.10.1-17
- rebuild with new lapack, https://bugzilla.redhat.com/show_bug.cgi?id=1149032
@ -971,10 +988,10 @@ fi
- Fix typo in SSE3 subpackage's summary.
* Sat Oct 24 2009 Deji Akingunola <dakingun@gmail.com> - 3.8.3-12
- Use alternatives to workaround multilib conflicts (BZ#508565).
- Use alternatives to workaround multilib conflicts (BZ#508565).
* Tue Sep 29 2009 Deji Akingunola <dakingun@gmail.com> - 3.8.3-11
- Obsolete the -header subpackage properly.
- Obsolete the -header subpackage properly.
* Sat Sep 26 2009 Deji Akingunola <dakingun@gmail.com> - 3.8.3-10
- Use the new arch. default for Pentium PRO (Fedora bug #510498)
@ -984,10 +1001,10 @@ fi
- Rebuild against fixed lapack (see #520518)
* Thu Aug 13 2009 Deji Akingunola <dakingun@gmail.com> - 3.8.3-8
- Revert the last change, it doesn't solve the problem.
- Revert the last change, it doesn't solve the problem.
* Tue Aug 04 2009 Deji Akingunola <dakingun@gmail.com> - 3.8.3-7
- Create a -header subpackage to avoid multilib conflicts (BZ#508565).
- Create a -header subpackage to avoid multilib conflicts (BZ#508565).
* Tue Aug 04 2009 Deji Akingunola <dakingun@gmail.com> - 3.8.3-6
- Add '-g' to build flag to allow proper genration of debuginfo subpackages (Fedora bug #509813)

1
sources
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@ -11,4 +11,3 @@ ebb4732aff468bbc223e7f734252173b USII32.tgz
f3e4ca175b5ffc49dce7f3c37f791827 IBMz964.tar.bz2
27e7baa49c588299260188afa78303dc POWER332.tar.bz2
af1f95e19d7afaf0342fb1377ec94817 ARMv732NEON.tar.bz2
e7ba742120bd75339ac4c6fbdd8bce92 lapack-3.5.0.tgz