624 lines
19 KiB
RPMSpec
624 lines
19 KiB
RPMSpec
%global singulardir %{_libdir}/Singular
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%global upstreamver 4-1-0
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%global downstreamver %(tr - . <<< %{upstreamver})
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%global patchver p2
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%if 0%{?fedora}
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%global ntl8 1
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%endif
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# Use this to build without polymake support if polymake is broken.
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%bcond_without polymake
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Name: Singular
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Version: %{downstreamver}%{?patchver}
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Release: 1%{?dist}
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Summary: Computer Algebra System for polynomial computations
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# License analysis:
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# - factory/readcf.cc, Singular/grammar.cc, and Singular/grammar.h are
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# nominally GPLv3+, but they are generated by bison, so the bison special
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# exception applies
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# - Singular/links/ndbm.cc and Singular/links/ndbm.h are BSD, which is subsumed
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# by both GPLv2 and GPLv3
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# - Everything else is marked either "GPLv2 or GPLv3" or "GPLv2 or later", with
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# the former more strict than the latter
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License: GPLv2 or GPLv3
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Source0: http://www.mathematik.uni-kl.de/ftp/pub/Math/Singular/SOURCES/%{upstreamver}/singular-%{version}.tar.gz
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URL: http://www.singular.uni-kl.de/
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BuildRequires: bison
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BuildRequires: cddlib-devel
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BuildRequires: desktop-file-utils
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BuildRequires: doxygen
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BuildRequires: emacs
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BuildRequires: flex
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BuildRequires: flint-devel
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BuildRequires: gcc-c++
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BuildRequires: gmp-devel
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BuildRequires: libtool
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BuildRequires: libxml2-devel
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BuildRequires: mathicgb-devel
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BuildRequires: ncurses-devel
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BuildRequires: ntl-devel%{?ntl8: >= 8.0}
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%if %{with polymake}
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BuildRequires: polymake
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%endif
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BuildRequires: python2-devel
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BuildRequires: readline-devel
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# Need uudecode for documentation images in tarball
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BuildRequires: sharutils
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BuildRequires: texinfo-tex
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BuildRequires: tex(latex)
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BuildRequires: zlib-devel
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Requires: %{name}-libs%{?_isa} = %{version}-%{release}
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Requires: environment-modules
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Requires: less
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Requires: surf-geometry
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# Support ARM and S390(x) architectures
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Patch0: %{name}-arches.patch
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# Fix both underlinking and overlinking
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Patch1: %{name}-link.patch
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# Fix the desktop files
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Patch2: %{name}-desktop.patch
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# Adapt to new template code in NTL 8
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Patch3: %{name}-ntl8.patch
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# Fix code that can overflow a character buffer with sprintf
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Patch4: %{name}-format.patch
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# Add missing parentheses that can change code meaning in a macro
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Patch5: %{name}-parens.patch
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# Fix a sequence point error
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Patch6: %{name}-sequence-point.patch
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# Fix code that violates the strict aliasing rules
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Patch7: %{name}-alias.patch
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# Adapt to polymake 3.1
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Patch8: %{name}-polymake.patch
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%description
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Singular is a computer algebra system for polynomial computations, with
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special emphasis on commutative and non-commutative algebra, algebraic
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geometry, and singularity theory.
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%package libs
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Summary: Singular library
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Requires: %{name}-libpolys%{?_isa} = %{version}-%{release}
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%description libs
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This package contains the main Singular library.
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%package devel
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Summary: Singular development files
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Requires: %{name}-libs%{?_isa} = %{version}-%{release}
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Requires: %{name}-libpolys-devel%{?_isa} = %{version}-%{release}
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%description devel
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This package contains the Singular development files.
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%package doc
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Summary: Singular documentation files
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Requires: %{name}%{?_isa} = %{version}-%{release}
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%description doc
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This package contains the Singular documentation files.
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%package emacs
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Summary: (X)Emacs interface to Singular
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Requires: emacs-common
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Requires: %{name}%{?_isa} = %{version}-%{release}
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%description emacs
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Emacs and XEmacs interface to Singular.
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%package -n factory
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Summary: C++ class library for multivariate polynomial data
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Requires: factory-gftables = %{version}-%{release}
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%description -n factory
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Factory is a C++ class library that implements a recursive
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representation of multivariate polynomial data. It handles sparse
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multivariate polynomials over different coefficient domains, such as Z,
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Q and GF(q), as well as algebraic extensions over Q and GF(q) in an
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efficient way. Factory includes algorithms for computing univariate and
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multivariate gcds, resultants, chinese remainders, and algorithms to
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factorize multivariate polynomials and to compute the absolute
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factorization of multivariate polynomials with integer coefficients.
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%package -n factory-devel
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Summary: Development files for the Singular factory
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Requires: factory%{?_isa} = %{version}-%{release}
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Requires: gmp-devel%{?_isa}
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# These can be removed once Fedora 25 reached EOL
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Obsoletes: %{name}-examples < 4.0.0-1
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Provides: %{name}-examples = %{version}-%{release}
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%description -n factory-devel
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Development files for the Singular factory.
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%package -n factory-gftables
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Summary: Singular factory addition tables
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BuildArch: noarch
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%description -n factory-gftables
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Factory uses addition tables to calculate in GF(p^n) in an efficient way.
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%package libpolys
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Summary: C++ class library for polynomials in Singular
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Requires: factory%{?_isa} = %{version}-%{release}
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%description libpolys
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Libpolys contains the data structures and basic algorithms for
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polynomials in Singular.
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%package libpolys-devel
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Summary: Development files for libpolys
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Requires: %{name}-libs%{?_isa} = %{version}-%{release}
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Requires: factory-devel%{?_isa} = %{version}-%{release}
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Requires: flint-devel%{?_isa}
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# These can be removed once Fedora 25 reached EOL
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Obsoletes: libfac-devel < 4.0.0-1
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Provides: libfac-devel = %{version}-%{release}
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%description libpolys-devel
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Development files for libpolys.
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%package polymake
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Summary: Singular interface to polymake
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Requires: polymake%{_isa}
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Requires: TOPCOM%{_isa}
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%description polymake
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Singular interface to polymake.
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%package surfex
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Summary: Singular java interface
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Requires: java
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Requires: %{name}%{?_isa} = %{version}-%{release}
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%description surfex
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This package contains the Singular java interface.
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%prep
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%setup -q -n singular-%{downstreamver}
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%patch0 -p1 -b .arches
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%patch1 -p1 -b .link
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%patch2 -p1 -b .desktop
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%patch3 -p1 -b .ntl8
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%patch4 -p1 -b .format
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%patch5 -p1 -b .parens
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%patch6 -p1 -b .seqpoint
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%patch7 -p1 -b .alias
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%patch8 -p1 -b .polymake
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# Regenerate configure due to patches 0 and 1
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autoreconf -fi
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# Fix encoding
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iconv -f iso8859-1 -t utf-8 COPYING > COPYING.utf8
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touch -r COPYING COPYING.utf8
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mv -f COPYING.utf8 COPYING
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%build
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export CPPFLAGS="-I%{_includedir}/flint"
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export CFLAGS="%{optflags} -fPIC -fno-delete-null-pointer-checks"
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export CXXFLAGS=$CFLAGS
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# Cannot use RPM_LD_FLAGS, as -Wl,-z,now breaks lazy module loading
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export LDFLAGS="-Wl,-z,relro"
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%configure \
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--bindir=%{singulardir} \
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--disable-silent-rules \
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--disable-optimizationflags \
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--disable-static \
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--enable-p-procs-dynamic \
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--enable-gfanlib \
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%if %{with polymake}
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--enable-polymake \
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%else
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--disable-polymake \
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%endif
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--with-gmp \
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--with-ntl \
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--with-flint \
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--with-mathicgb \
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--with-python \
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--with-readline \
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--disable-doc \
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--with-malloc=system
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make %{?_smp_mflags}
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make %{?_smp_mflags} -C dox html
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%install
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make DESTDIR=%{buildroot} install
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# Validate the desktop files
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desktop-file-validate %{buildroot}%{_datadir}/applications/Singular.desktop
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desktop-file-validate \
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%{buildroot}%{_datadir}/applications/Singular-manual.desktop
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# We don't want the libtool files
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rm -f %{buildroot}%{_libdir}/*.la
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rm -f %{buildroot}%{_libexecdir}/singular/MOD/*.la
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# Remove files we don't want in the installed tree
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rm -f %{buildroot}%{_datadir}/singular/emacs/{ChangeLog,COPYING,NEWS}
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# Move the config scripts
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mkdir -p %{buildroot}%{_bindir}
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mv %{buildroot}%{singulardir}/*-config %{buildroot}%{_bindir}
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# remove script that calls surf; we don't ship it
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rm -f %{buildroot}%{singulardir}/singularsurf
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# create a script also setting SINGULARPATH
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cat > %{buildroot}%{_bindir}/Singular << EOF
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#!/bin/sh
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. /etc/profile.d/modules.sh
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module load surf-geometry-%{_arch}
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export SINGULARPATH=%{singulardir}
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exec %{singulardir}/Singular-%{upstreamver} "\$@"
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EOF
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chmod 0755 %{buildroot}%{_bindir}/Singular
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# TSingular
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cat > %{buildroot}%{_bindir}/TSingular << EOF
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#!/bin/sh
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. /etc/profile.d/modules.sh
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module load surf-geometry-%{_arch}
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exec %{singulardir}/TSingular --singular %{_bindir}/Singular "\$@"
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EOF
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chmod 0755 %{buildroot}%{_bindir}/TSingular
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# surfex
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cat > %{buildroot}%{_bindir}/surfex << EOF
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#!/bin/sh
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. /etc/profile.d/modules.sh
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module load surf-geometry-%{_arch}
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exec %{singulardir}/surfex %{singulardir}/LIB/surfex "\$@"
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EOF
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chmod 0755 %{buildroot}%{_bindir}/surfex
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# ESingular
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cat > %{buildroot}%{_bindir}/ESingular << EOF
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#!/bin/sh
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. /etc/profile.d/modules.sh
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module load surf-geometry-%{_arch}
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exec %{singulardir}/ESingular --singular %{_bindir}/Singular "\$@"
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EOF
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chmod 0755 %{buildroot}%{_bindir}/ESingular
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%check
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export LD_LIBRARY_PATH=%{buildroot}%{_libdir}
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make check
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%post
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/sbin/install-info %{_infodir}/singular.hlp %{_infodir}/dir 2>/dev/null || :
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%postun
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if [ $1 = 0 ]; then
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/sbin/install-info --delete %{_infodir}/singular.hlp %{_infodir}/dir 2>/dev/null || :
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fi
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%post -n factory -p /sbin/ldconfig
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%postun -n factory -p /sbin/ldconfig
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%post libpolys -p /sbin/ldconfig
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%postun libpolys -p /sbin/ldconfig
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%post libs -p /sbin/ldconfig
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%postun libs -p /sbin/ldconfig
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%files
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%doc README.md
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%{_bindir}/Singular
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%{_bindir}/TSingular
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%{_infodir}/singular.hlp*
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%{_mandir}/man1/Singular.1*
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%{_mandir}/man1/TSingular.1*
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%{_datadir}/applications/Singular.desktop
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%{_datadir}/icons/Singular.png
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%{_datadir}/singular/singular.idx
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%docdir %{_datadir}/singular/html/
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%{_datadir}/singular/html/
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%{singulardir}/Singular
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%{singulardir}/TSingular
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%files libs
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%doc libpolys/README
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%license COPYING
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%license GPL2
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%license GPL3
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%{_libdir}/libgfan.so.*
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%{_libdir}/libSingular-*.so
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%{_libexecdir}/singular/
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%exclude %{_libexecdir}/singular/MOD/polymake.so
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%dir %{_datadir}/singular/
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%{_datadir}/singular/LIB/
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%exclude %{_datadir}/singular/LIB/polymake.lib
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%exclude %{_datadir}/singular/LIB/surfex.lib
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%files devel
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%doc kernel/ChangeLog
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%{_bindir}/libsingular-config
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%{_includedir}/gfanlib/
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%{_includedir}/singular/kernel/
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%{_includedir}/singular/Singular/
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%{_includedir}/singular/singularconfig.h
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%{_libdir}/libgfan.so
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%{_libdir}/libSingular.so
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%{_libdir}/pkgconfig/Singular.pc
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%files doc
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%doc dox/html/
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%doc dox/*.html
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%doc dox/*.png
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%doc dox/*.css
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%doc dox/tags
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%{_datadir}/applications/Singular-manual.desktop
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%files emacs
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%license emacs/COPYING
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%doc emacs/ChangeLog
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%doc emacs/NEWS
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%{_bindir}/ESingular
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%{_mandir}/man1/ESingular.1*
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%{_datadir}/singular/emacs/
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%{singulardir}/ESingular
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%files surfex
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%{_bindir}/surfex
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%{_datadir}/singular/LIB/surfex.lib
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%files -n factory
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%license factory/COPYING
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%doc factory/README
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%doc factory/NEWS
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%{_libdir}/libfactory-*.so
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%{_libdir}/libomalloc-*.so
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%{_libdir}/libsingular_resources-*.so
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%files -n factory-devel
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%doc factory/ChangeLog
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%doc factory/examples
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%{_includedir}/factory/
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%{_includedir}/omalloc/
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%{_includedir}/resources/
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%{_libdir}/libfactory.so
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%{_libdir}/libomalloc.so
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%{_libdir}/libsingular_resources.so
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%{_libdir}/pkgconfig/factory.pc
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%{_libdir}/pkgconfig/omalloc.pc
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%{_libdir}/pkgconfig/singular_resources.pc
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%files -n factory-gftables
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%{_datadir}/factory/
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%files libpolys
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%license libpolys/COPYING
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%doc libpolys/README
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%{_libdir}/libpolys-*.so
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%files libpolys-devel
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%{_bindir}/libpolys-config
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%dir %{_includedir}/singular/
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%{_includedir}/singular/coeffs/
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%{_includedir}/singular/libpolysconfig.h
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%{_includedir}/singular/misc/
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%{_includedir}/singular/polys/
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%{_includedir}/singular/reporter/
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%{_libdir}/libpolys.so
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%{_libdir}/pkgconfig/libpolys.pc
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%files polymake
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%{_libexecdir}/singular/MOD/polymake.so
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%{_datadir}/singular/LIB/polymake.lib
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%changelog
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* Wed Apr 5 2017 Jerry James <loganjerry@gmail.com> - 4.1.0p2-1
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- New upstream version (bz 1181772, 1321077)
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- Drop upstreamed patches: -destdir, -headers, -doc, -builddid, -undefined,
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and -semaphore
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- Add patches: -desktop, -format, -parens, -sequence-point, -alias, -polymake
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- libpolys subpackage replaces libfac
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- Rework the Emacs support
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* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 3.1.7-12
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
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* Thu Jan 12 2017 Igor Gnatenko <ignatenko@redhat.com> - 3.1.7-11
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- Rebuild for readline 7.x
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* Wed Nov 9 2016 Paul Howarth <paul@city-fan.org> - 3.1.7-10
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- Bootstrap build for ppc64
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* Thu Oct 20 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-9
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- Rebuild for ntl 10.1.0
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* Mon Sep 5 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-8
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- Rebuild for ntl 9.11.0
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* Tue Jul 26 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-7
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- Rebuild with polymake support
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* Mon Jul 25 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-6
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- Rebuild for ntl 9.10.0
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* Thu Jun 2 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-5
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- Rebuild for ntl 9.9.1
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* Fri Apr 29 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-4
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- Rebuild for ntl 9.8.0
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* Tue Apr 12 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-3
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- Rebuild for polymake 3.0r1
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* Sat Mar 19 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-2
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- Rebuild for ntl 9.7.0
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* Sat Feb 20 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-1
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- Update to 3.1.7; fixes FTBFS (bz 1307301)
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- Drop upstreamed -flint24 and -gcc5 patches
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- Add -boolean patch to fix a malformed boolean expression
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* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 3.1.6-21
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
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* Fri Dec 4 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-20
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- Rebuild for ntl 9.6.2
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- Drop obsolete ntl6 patch
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* Fri Oct 16 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-19
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- Rebuild for ntl 9.4.0
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* Sat Oct 3 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-18
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- Rebuild with polymake support
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* Sat Sep 19 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-17
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- Rebuild for flint 2.5.2 and ntl 9.3.0
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* Sun Jul 19 2015 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-16
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- Disable polymake due to broken dependency cycle
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- Correct previous perl warning that is now an error
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- Use interactive bash on wrappers to work with other login shells (#1243580)
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* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.6-15
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
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* Mon May 18 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-14
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- Rebuild for ntl 9.1.1 and cddlib-094h
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* Sat May 9 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-13
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- Rebuild for ntl 9.1.0
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* Sun Apr 26 2015 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-12
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- Update arches patch to support aarch64 (#1213484)
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* Thu Apr 2 2015 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-11
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- Rebuild for rawhide gcc5 and c++ string and list abi
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* Mon Feb 2 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-10
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- Rebuild for ntl 8.1.2
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* Thu Jan 15 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-9
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- Rebuild for ntl 8.1.0
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- Add Singular-ntl8.patch to adapt
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* Tue Oct 28 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-8
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- Rebuild for ntl 6.2.1
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* Thu Sep 11 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-7
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- Rebuild for polymake -2.13-8.git20140811
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* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.6-6
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
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* Tue Jun 17 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-5
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- Update Singular-ntl6.patch to instantiate more missing functions
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* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.6-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
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* Thu May 29 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-3
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- Rebuild with polymake support
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- Fix libsingular.h permissions
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* Sun May 18 2014 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-2
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- Merge with RFE 3.1.6 update (#1074590)
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- Remove patches applied upstream
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- Disable polymake to allow interface rebootstrap
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* Tue Apr 29 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-14
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- Rebuild for polymake-2.13
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* Wed Apr 2 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-13
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- Rebuild for polymake-2.12-15.svn20140326
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* Wed Apr 2 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-12
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- Rebuild for NTL 6.1.0
|
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- Fix default paths
|
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- Add ability to rebuild without polymake
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* Mon Mar 10 2014 Rex Dieter <rdieter@fedoraproject.org> - 3.1.6-1
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- 3.1.6
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* Mon Mar 10 2014 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-11
|
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- fix/workaround char=unsigned char assumptions
|
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- (more) consistently use RPM_OPT_FLAGS
|
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- --with-flint --with-polymake
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* Tue Jan 14 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-10
|
|
- Update normaliz interface for normaliz 2.8 and later
|
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|
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* Mon Nov 25 2013 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-9
|
|
- ExclusiveArch: %%ix86 x86_64
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* Fri Aug 16 2013 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-8
|
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- Correct underlink problem (#991920#c1)
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* Thu Aug 01 2013 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-7
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- rebuild
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* Tue May 21 2013 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-6
|
|
- factory-gftables.noarch subpkg (#965655)
|
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* Mon May 6 2013 Jerry James <loganjerry@gmail.com> - 3.1.5-5
|
|
- Rebuild for ntl 6.0.0
|
|
- Fix semaphore code
|
|
- Fix underlinked library
|
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* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.5-4
|
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
|
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* Sun Nov 11 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-3
|
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- Rebuild to have factory include path patch in rawhide package
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* Tue Aug 7 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-2
|
|
- Do not build conflicts with factory-devel neither libfac-devel (#842407)
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* Sat Aug 4 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-1
|
|
- Update to Singular 3.1.5, based on sagemath trac ticket #13237
|
|
- Remove already applied patches from sagemath Singular spkg
|
|
- Rediff Fedora rpm build patches
|
|
- Rediff factory and libfac patches for Macaulay2
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* Thu Jul 19 2012 Rex Dieter <rdieter@fedoraproject.org> - 3.1.3-8
|
|
- macaulay2 patches for libfac/factory
|
|
- omit duplicate %%description sections
|
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* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.3-7
|
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
|
|
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* Sun Jul 8 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-6
|
|
- Update license field to match valid values.
|
|
- Provide newer libfac-devel matching Singular version (#819264).
|
|
- Provide newer factory-devel matching Singular version (#819264).
|
|
- Remove platform specific factoryconf.h file as only platform specific
|
|
contents it has is "#define INT64 long long int" what is not really correct,
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|
neither completely wrong...
|
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* Sun Jul 1 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-5
|
|
- Do not conflict Singular-devel with libfac-devel.
|
|
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* Sun Jul 1 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-4
|
|
- Update license information to match COPYING information.
|
|
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* Wed May 9 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-3
|
|
- Correct unresolved mmInit symbol in libsingular.so.
|
|
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* Sun May 6 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-2
|
|
- Install singular factory headers in singular devel directory.
|
|
- Tag singular-doc files as documentation.
|
|
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* Sat May 5 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-1
|
|
- Initial Singular spec.
|