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7
.gitignore
vendored
7
.gitignore
vendored
@ -6,10 +6,3 @@ affyio_1.16.0.tar.gz
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/affyio_1.28.0.tar.gz
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/affyio_1.30.0.tar.gz
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/affyio_1.32.0.tar.gz
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/affyio_1.46.0.tar.gz
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/affyio_1.50.0.tar.gz
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/affyio_1.56.0.tar.gz
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/affyio_1.58.0.tar.gz
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/affyio_1.60.0.tar.gz
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/affyio_1.62.0.tar.gz
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/affyio_1.66.0.tar.gz
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@ -1,15 +1,19 @@
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%define packname affyio
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%define Rversion 3.4.0
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%define Rversion 3.0.0
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Name: R-%{packname}
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Version: 1.66.0
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Version: 1.32.0
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Release: 3%{dist}
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Summary: Tools for parsing Affymetrix data files
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Summary(fr): Outils d'analyse de fichier de données de puces affymetrix
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Group: Applications/Engineering
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License: LGPLv2+
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URL: http://bioconductor.org/packages/release/bioc/html/affyio.html
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Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
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Patch0: affyio-fix-DESCRIPTION-Depends.patch
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BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
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Requires: R-core >= %{Rversion} R-methods
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BuildRequires: R-devel >= %{Rversion} tex(latex) zlib-devel R-methods
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%description
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@ -26,7 +30,6 @@ CEL ou CDF.
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%setup -q -c -n %{packname}
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sed -i '/Imports: zlibbioc/d' %{packname}/DESCRIPTION
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sed -i '/import(zlibbioc)/d' %{packname}/NAMESPACE
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%patch0 -p1 -b .fixdep
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%build
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@ -43,10 +46,15 @@ rm -rf %{buildroot}%{_libdir}/R/library/R.css
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%check
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%{_bindir}/R CMD check %{packname}
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%clean
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rm -rf %{buildroot}
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%files
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%defattr(-, root, root, -)
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%dir %{_libdir}/R/library/%{packname}
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%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
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%doc %{_libdir}/R/library/%{packname}/html
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%doc %{_libdir}/R/library/%{packname}/LICENSE
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%{_libdir}/R/library/%{packname}/INDEX
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%{_libdir}/R/library/%{packname}/NAMESPACE
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%{_libdir}/R/library/%{packname}/R/
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@ -55,80 +63,6 @@ rm -rf %{buildroot}%{_libdir}/R/library/R.css
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%{_libdir}/R/library/%{packname}/libs
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%changelog
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* Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 1.66.0-3
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- R-maint-sig mass rebuild
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* Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.66.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
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* Tue Aug 2 2022 Tom Callaway <spot@fedoraproject.org> - 1.66.0-1
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- update to 1.66.0
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- R 4.2.1
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* Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.62.0-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
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* Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.62.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
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* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.62.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
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* Mon Jun 7 2021 Tom Callaway <spot@fedoraproject.org> - 1.62.0-1
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- update to 1.62.0
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* Wed Feb 3 2021 Tom Callaway <spot@fedoraproject.org> - 1.60.0-1
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- update to 1.60.0
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* Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.58.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
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* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.58.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
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* Mon Jun 8 2020 Tom Callaway <spot@fedoraproject.org> - 1.58.0-1
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- rebuild for R 4
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- update to 1.58.0
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* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.56.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
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* Thu Nov 7 2019 Tom Callaway <spot@fedoraproject.org> - 1.56.0-1
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- update to 1.56.0
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* Mon Aug 12 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 1.50.0-5
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- Remove explicit dependencies provided by automatic dependency generator
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* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
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* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
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* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
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* Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 1.50.0-1
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- update to 1.50.0
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* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.0-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
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* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
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* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
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* Wed May 24 2017 Tom Callaway <spot@fedoraproject.org> - 1.46.0-1
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- update to 1.46.0
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* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.32.0-5
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
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* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.32.0-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
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* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.32.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
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@ -1,12 +0,0 @@
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diff -up affyio/affyio/DESCRIPTION.fixdep affyio/affyio/DESCRIPTION
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--- affyio/affyio/DESCRIPTION.fixdep 2018-05-16 12:06:44.114260296 -0400
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+++ affyio/affyio/DESCRIPTION 2018-05-16 12:07:43.584933281 -0400
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@@ -3,7 +3,7 @@ Version: 1.50.0
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Title: Tools for parsing Affymetrix data files
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Author: Ben Bolstad <bmb@bmbolstad.com>
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Maintainer: Ben Bolstad <bmb@bmbolstad.com>
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-Depends: R (>= 2.6.0)
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+Depends: R (>= 2.6.0), methods
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Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
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License: LGPL (>= 2)
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URL: https://github.com/bmbolstad/affyio
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