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48 Commits

Author SHA1 Message Date
Iñaki Úcar
d00dd9cd3e R-maint-sig mass rebuild 2023-04-21 13:08:17 +02:00
Fedora Release Engineering
87b8c8938a Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2023-01-18 20:14:12 +00:00
Tom spot Callaway
7f47ed0a22 update to 1.66.0, R 4.2.1 2022-08-02 18:18:42 -04:00
Fedora Release Engineering
3f3d3e74e4 Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2022-07-20 19:13:28 +00:00
Fedora Release Engineering
860399a844 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2022-01-19 19:48:17 +00:00
Fedora Release Engineering
2c87ce962c - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2021-07-21 16:12:25 +00:00
Fedora Release Engineering
be9ea22373 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2021-07-21 11:17:44 +00:00
Tom spot Callaway
0dbb0de82d update to 1.62.0, rebuild for R 4.1.0 2021-06-07 11:59:51 -04:00
Tom spot Callaway
637634ada6 1.60.0 2021-02-03 13:35:21 -05:00
Fedora Release Engineering
00e126f836 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2021-01-25 22:48:08 +00:00
Fedora Release Engineering
100f1c31c6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2020-07-27 10:46:00 +00:00
Tom Callaway
8b60ee23f9 rebuild for R 4, update to 1.58.0 2020-06-08 10:50:20 -04:00
Fedora Release Engineering
80a3b1f507 - Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2020-01-28 09:54:12 +00:00
Tom Callaway
7602f2919f 1.56.0 2019-11-07 08:54:14 -05:00
Tomas Hrcka
7d66843489 Unretirement request: https://pagure.io/releng/issue/8969
Signed-off-by: Tomas Hrcka <thrcka@redhat.com>
2019-11-07 11:27:51 +01:00
Miro Hrončok
b969e36c9e Orphaned for 6+ weeks 2019-10-08 00:58:26 +02:00
Elliott Sales de Andrade
05ac169c27 Remove explicit dependencies provided by automatic dependency generator. 2019-08-12 04:42:04 -04:00
Fedora Release Engineering
c1df45b8e3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2019-07-24 16:18:32 +00:00
Fedora Release Engineering
a05bf00cb0 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2019-01-31 12:00:56 +00:00
Igor Gnatenko
be4091c2d7 Remove obsolete Group tag
References: https://fedoraproject.org/wiki/Changes/Remove_Group_Tag
2019-01-28 20:24:44 +01:00
Fedora Release Engineering
f014969d43 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2018-07-12 19:20:52 +00:00
Tom Callaway
77558b0904 1.50.0, R 3.5.0 2018-05-16 12:11:02 -04:00
Fedora Release Engineering
69a5ab5d9c - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
Signed-off-by: Fedora Release Engineering <releng@fedoraproject.org>
2018-02-07 01:11:50 +00:00
Fedora Release Engineering
4e24694f01 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild 2017-08-02 17:10:56 +00:00
Fedora Release Engineering
6466ae58a9 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild 2017-07-26 02:11:56 +00:00
Tom Callaway
1224a671f4 new sources 2017-05-24 15:45:24 -04:00
Tom Callaway
1bbff99f75 1.46.0 2017-05-24 15:44:22 -04:00
Fedora Release Engineering
75e79f5558 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild 2017-02-10 05:26:27 +00:00
Dennis Gilmore
adcb253295 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild 2016-02-03 15:42:32 +00:00
Dennis Gilmore
84adbdbb10 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild 2015-06-16 23:13:58 +00:00
Peter Robinson
eb99b4770f - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild 2014-08-15 19:19:12 +00:00
Pierre-Yves Chibon
99b2321a76 Update to 1.32.0 2014-07-02 15:59:59 +02:00
Pierre-Yves Chibon
7215a4ad7c Drop un-used patch 2014-06-10 09:13:17 +02:00
Pierre-Yves Chibon
fe26f92d09 Replace the patch for zlibbioc by a couple of sed command 2014-06-10 08:47:37 +02:00
Dennis Gilmore
f45bcf73de - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild 2014-06-06 18:22:01 -05:00
Pierre-Yves Chibon
a1924062db Update to 1.30.0 2014-01-27 17:51:27 +01:00
Dennis Gilmore
b43253c423 - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild 2013-08-02 18:30:35 -05:00
Tom Callaway
19d053d54a R3 2013-04-11 11:43:00 -04:00
Pierre-Yves Chibon
561d46d8f3 Update to version 1.28.0 2013-04-07 11:32:32 +02:00
Pierre-Yves Chibon
d5030f0ace Update to 1.26.0 2013-04-04 12:26:49 +02:00
Dennis Gilmore
7ead51283e - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild 2013-02-13 09:42:47 -06:00
Dennis Gilmore
1784b12813 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild 2012-07-18 09:55:36 -05:00
Dennis Gilmore
35298276a8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild 2012-01-12 14:40:31 -06:00
Tom "spot" Callaway
f197724439 Rebuild for 2.14.0 2011-11-09 13:54:57 -05:00
pingou
ae3a419e17 Update to 1.20.0 2011-06-22 20:20:28 +02:00
Dennis Gilmore
3599224c95 - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild 2011-02-07 18:46:44 -06:00
pingou
f2da69437e Update to 1.18.0 2010-10-26 09:32:35 +02:00
Fedora Release Engineering
4749c560a4 dist-git conversion 2010-07-28 09:17:33 +00:00
6 changed files with 154 additions and 36 deletions

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@ -1 +0,0 @@
affyio_1.16.0.tar.gz

15
.gitignore vendored Normal file
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@ -0,0 +1,15 @@
affyio_1.16.0.tar.gz
/affyio_1.18.0.tar.gz
/affyio_1.20.0.tar.gz
/affyio_1.22.0.tar.gz
/affyio_1.26.0.tar.gz
/affyio_1.28.0.tar.gz
/affyio_1.30.0.tar.gz
/affyio_1.32.0.tar.gz
/affyio_1.46.0.tar.gz
/affyio_1.50.0.tar.gz
/affyio_1.56.0.tar.gz
/affyio_1.58.0.tar.gz
/affyio_1.60.0.tar.gz
/affyio_1.62.0.tar.gz
/affyio_1.66.0.tar.gz

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@ -1,21 +0,0 @@
# Makefile for source rpm: R-affyio
# $Id: Makefile,v 1.1 2008/01/19 18:25:28 kevin Exp $
NAME := R-affyio
SPECFILE = $(firstword $(wildcard *.spec))
define find-makefile-common
for d in common ../common ../../common ; do if [ -f $$d/Makefile.common ] ; then if [ -f $$d/CVS/Root -a -w $$d/Makefile.common ] ; then cd $$d ; cvs -Q update ; fi ; echo "$$d/Makefile.common" ; break ; fi ; done
endef
MAKEFILE_COMMON := $(shell $(find-makefile-common))
ifeq ($(MAKEFILE_COMMON),)
# attept a checkout
define checkout-makefile-common
test -f CVS/Root && { cvs -Q -d $$(cat CVS/Root) checkout common && echo "common/Makefile.common" ; } || { echo "ERROR: I can't figure out how to checkout the 'common' module." ; exit -1 ; } >&2
endef
MAKEFILE_COMMON := $(shell $(checkout-makefile-common))
endif
include $(MAKEFILE_COMMON)

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@ -1,19 +1,15 @@
%define packname affyio
%define Rversion 2.11.0
%define Rversion 3.4.0
Name: R-%{packname}
Version: 1.16.0
Release: 1%{dist}
Version: 1.66.0
Release: 3%{dist}
Summary: Tools for parsing Affymetrix data files
Summary(fr): Outils d'analyse de fichier de données de puces affymetrix
Group: Applications/Engineering
License: LGPLv2+
URL: http://bioconductor.org/packages/release/bioc/html/affyio.html
Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
Requires: R-core >= %{Rversion} R-methods
Patch0: affyio-fix-DESCRIPTION-Depends.patch
BuildRequires: R-devel >= %{Rversion} tex(latex) zlib-devel R-methods
%description
@ -28,6 +24,9 @@ CEL ou CDF.
%prep
%setup -q -c -n %{packname}
sed -i '/Imports: zlibbioc/d' %{packname}/DESCRIPTION
sed -i '/import(zlibbioc)/d' %{packname}/NAMESPACE
%patch0 -p1 -b .fixdep
%build
@ -44,15 +43,10 @@ rm -rf %{buildroot}%{_libdir}/R/library/R.css
%check
%{_bindir}/R CMD check %{packname}
%clean
rm -rf %{buildroot}
%files
%defattr(-, root, root, -)
%dir %{_libdir}/R/library/%{packname}
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/LICENSE
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/R/
@ -61,6 +55,125 @@ rm -rf %{buildroot}
%{_libdir}/R/library/%{packname}/libs
%changelog
* Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 1.66.0-3
- R-maint-sig mass rebuild
* Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.66.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Tue Aug 2 2022 Tom Callaway <spot@fedoraproject.org> - 1.66.0-1
- update to 1.66.0
- R 4.2.1
* Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.62.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.62.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.62.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Mon Jun 7 2021 Tom Callaway <spot@fedoraproject.org> - 1.62.0-1
- update to 1.62.0
* Wed Feb 3 2021 Tom Callaway <spot@fedoraproject.org> - 1.60.0-1
- update to 1.60.0
* Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.58.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.58.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Mon Jun 8 2020 Tom Callaway <spot@fedoraproject.org> - 1.58.0-1
- rebuild for R 4
- update to 1.58.0
* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.56.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Thu Nov 7 2019 Tom Callaway <spot@fedoraproject.org> - 1.56.0-1
- update to 1.56.0
* Mon Aug 12 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 1.50.0-5
- Remove explicit dependencies provided by automatic dependency generator
* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 1.50.0-1
- update to 1.50.0
* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.46.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Wed May 24 2017 Tom Callaway <spot@fedoraproject.org> - 1.46.0-1
- update to 1.46.0
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.32.0-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.32.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.32.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.32.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Wed Jul 02 2014 pingou <pingou@pingoured.fr> 1.32.0-1
- Update to version 1.32.0
* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.30.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Mon Jan 27 2014 pingou <pingou@pingoured.fr> 1.30.0-1
- Update to version 1.30.0
* Fri Aug 02 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.28.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Sun Apr 07 2013 pingou <pingou@pingoured.fr> 1.28.0-1
- Update to version 1.28.0
* Thu Apr 04 2013 pingou <pingou@pingoured.fr> 1.26.0-1
- Update to version 1.26.0
* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
* Thu Jan 12 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild
* Wed Nov 9 2011 Tom Callaway <spot@fedoraproject.org> 1.22.0-1
- Update to 1.22.0
* Wed Jun 22 2011 pingou <pingou@pingoured.fr> 1.20.0-1
- Update to version 1.20.0
* Mon Feb 07 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.18.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
* Tue Oct 26 2010 pingou <pingou@pingoured.fr> 1.18.0-1
- Update to version 1.18.0
* Tue May 11 2010 pingou <pingou@pingoured.fr> 1.16.0-1
- Update to version 1.16.0
- Fix url to a more stable form

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@ -0,0 +1,12 @@
diff -up affyio/affyio/DESCRIPTION.fixdep affyio/affyio/DESCRIPTION
--- affyio/affyio/DESCRIPTION.fixdep 2018-05-16 12:06:44.114260296 -0400
+++ affyio/affyio/DESCRIPTION 2018-05-16 12:07:43.584933281 -0400
@@ -3,7 +3,7 @@ Version: 1.50.0
Title: Tools for parsing Affymetrix data files
Author: Ben Bolstad <bmb@bmbolstad.com>
Maintainer: Ben Bolstad <bmb@bmbolstad.com>
-Depends: R (>= 2.6.0)
+Depends: R (>= 2.6.0), methods
Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
License: LGPL (>= 2)
URL: https://github.com/bmbolstad/affyio

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@ -1 +1 @@
1d9e0153b133cd1d5604a78670c8f4b3 affyio_1.16.0.tar.gz
SHA512 (affyio_1.66.0.tar.gz) = 76d922484368320d2c65b8c0fba7ce4d3a0b56f5db368914d1ff43d29433b5e40a6d5d9db00b9b78638aac0c72e62101f7be24bb1e4e80f9c5e080e252a4a35f