2008-01-19 19:05:54 +00:00
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%define packname affyio
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2010-05-11 13:18:04 +00:00
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%define Rversion 2.11.0
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2008-01-19 19:05:54 +00:00
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Name: R-%{packname}
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2011-11-09 18:54:57 +00:00
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Version: 1.22.0
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2013-02-13 15:42:47 +00:00
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Release: 4%{dist}
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2008-01-19 19:05:54 +00:00
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Summary: Tools for parsing Affymetrix data files
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Summary(fr): Outils d'analyse de fichier de données de puces affymetrix
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Group: Applications/Engineering
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License: LGPLv2+
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2010-05-11 13:18:04 +00:00
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URL: http://bioconductor.org/packages/release/bioc/html/affyio.html
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Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
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2011-11-09 18:54:57 +00:00
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Patch0: R-affyio-1.22.0-no-zlibbioc.patch
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2008-01-19 19:05:54 +00:00
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BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
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2010-05-11 13:18:04 +00:00
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Requires: R-core >= %{Rversion} R-methods
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2009-11-21 13:43:24 +00:00
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BuildRequires: R-devel >= %{Rversion} tex(latex) zlib-devel R-methods
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2008-01-19 19:05:54 +00:00
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%description
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Routines for parsing Affymetrix data files based upon file format
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information. Primary focus is on accessing the CEL and CDF file formats.
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%description -l fr
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Scripts pour analyser les fichiers de données issuent de puces affymetrix
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basé sur les informations fournis pas les extensions. Un des premier
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objectifs est de convertir les données dans des fichiers au format
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CEL ou CDF.
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%prep
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%setup -q -c -n %{packname}
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2011-11-09 18:54:57 +00:00
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%patch0 -p0 -b .zlibbioc
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2008-01-19 19:05:54 +00:00
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%build
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%install
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rm -rf %{buildroot}
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mkdir -p %{buildroot}%{_libdir}/R/library
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R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
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# Clean up in advance of check
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test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
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rm -rf %{buildroot}%{_libdir}/R/library/R.css
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%check
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%{_bindir}/R CMD check %{packname}
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%clean
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rm -rf %{buildroot}
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%files
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%defattr(-, root, root, -)
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%dir %{_libdir}/R/library/%{packname}
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%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
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%doc %{_libdir}/R/library/%{packname}/html
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%doc %{_libdir}/R/library/%{packname}/LICENSE
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%{_libdir}/R/library/%{packname}/INDEX
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%{_libdir}/R/library/%{packname}/NAMESPACE
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%{_libdir}/R/library/%{packname}/R/
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%{_libdir}/R/library/%{packname}/Meta
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%{_libdir}/R/library/%{packname}/help
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2008-11-30 00:12:51 +00:00
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%{_libdir}/R/library/%{packname}/libs
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2008-01-19 19:05:54 +00:00
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%changelog
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2013-02-13 15:42:47 +00:00
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* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-4
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
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2012-07-18 14:55:36 +00:00
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* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
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2012-01-12 20:40:31 +00:00
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* Thu Jan 12 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild
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2011-11-09 18:54:57 +00:00
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* Wed Nov 9 2011 Tom Callaway <spot@fedoraproject.org> 1.22.0-1
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- Update to 1.22.0
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2011-06-22 18:20:28 +00:00
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* Wed Jun 22 2011 pingou <pingou@pingoured.fr> 1.20.0-1
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- Update to version 1.20.0
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2011-02-08 00:46:44 +00:00
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* Mon Feb 07 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.18.0-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
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2010-10-26 07:32:35 +00:00
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* Tue Oct 26 2010 pingou <pingou@pingoured.fr> 1.18.0-1
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- Update to version 1.18.0
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2010-05-11 13:18:04 +00:00
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* Tue May 11 2010 pingou <pingou@pingoured.fr> 1.16.0-1
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- Update to version 1.16.0
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- Fix url to a more stable form
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- Remove R on post/postun since there is no post/postun
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2009-11-21 13:43:24 +00:00
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* Sat Nov 21 2009 pingou <pingou@pingoured.fr> 1.14.0-1
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- Update to 1.14.0
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- Remove %%post and %%postun
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- Adapt %%files to R-2.10.0
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2009-07-24 16:11:14 +00:00
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* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.12.0-3
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
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2009-04-29 12:36:22 +00:00
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* Wed Apr 29 2009 pingou <pingou@pingoured.fr> - 1.12.0-2
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- version 1.20.0 != 1.12.0
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2009-04-29 11:49:27 +00:00
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* Wed Apr 29 2009 pingou <pingou@pingoured.fr> - 1.12.0-1
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- Update to Bioconductor 2.4 and R 2.9.0
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- Add requires to R-methods
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2009-02-27 20:11:08 +00:00
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* Mon Feb 23 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.10.1-4
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2009-02-23 22:56:36 +00:00
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
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2009-01-22 14:44:16 +00:00
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* Thu Jan 22 2009 pingou <pingou-at-pingoured.fr> 1.10.1-2
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- Typo on the release number
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* Thu Jan 22 2009 pingou <pingou-at-pingoured.fr> 1.10.1-1
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2009-01-22 14:37:24 +00:00
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- Update to newest version
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2008-11-30 00:12:51 +00:00
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* Sun Nov 30 2008 pingou <pingoufc4-at-yahoo.fr> 1.10.0-3
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- Own the folder libs -- #473618
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2008-11-20 11:58:00 +00:00
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* Thu Nov 20 2008 pingou <pingoufc4-at-yahoo.fr> 1.10.0-2
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- Correct the Source0
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2008-10-27 19:38:02 +00:00
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* Mon Oct 27 2008 pingou <pingoufc4-at-yahoo.fr> 1.10.0-1
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- Update to version 1.10.0 for R >= 2.8.0
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2008-09-05 15:18:42 +00:00
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* Fri Sep 05 2008 pingou <pingoufc4-at-yahoo.fr> 1.8.1-1
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- Update to version 1.8.1
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2008-05-02 07:56:15 +00:00
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* Fri May 02 2008 Pingou <pingoufc4@yahoo.fr> 1.8.0-1
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- Update to bioconductor 2.2
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2008-02-19 19:31:59 +00:00
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* Tue Feb 19 2008 Fedora Release Engineering <rel-eng@fedoraproject.org> - 1.6.1-3
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- Autorebuild for GCC 4.3
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2008-02-09 19:57:16 +00:00
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* Sat Feb 09 2008 Pingou <pingoufc4@yahoo.fr> 1.6.1-2
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- Change on the URL
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2008-01-19 19:05:54 +00:00
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* Mon Oct 08 2007 Pingou <pingoufc4@yahoo.fr> 1.6.1-1
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- Update to bioconductor 2.1
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* Wed Aug 29 2007 Pingou <pingoufc4@yahoo.fr> 1.4.1-2
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- Change in the license tag to fit the guide lines
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2008-02-09 19:57:16 +00:00
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2008-01-19 19:05:54 +00:00
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* Mon Jul 02 2007 Pingou <pingoufc4@yahoo.fr> 1.4.1-1
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- initial package for Fedora
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