127 lines
4.0 KiB
RPMSpec
127 lines
4.0 KiB
RPMSpec
%global packname IRanges
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%global BioC 2.5
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%global Rvers 2.10.0
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Name: R-%{packname}
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Version: 1.4.11
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Release: 1%{?dist}
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Summary: Low-level containers for storing sets of integer ranges
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Group: Applications/Engineering
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License: Artistic 2.0 and Copyright only
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# See https://www.redhat.com/archives/fedora-r-devel-list/2009-April/msg00001.html
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URL: http://bioconductor.org/packages/%{BioC}/bioc/html/IRanges.html
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Source0: http://bioconductor.org/packages/%{BioC}/bioc/src/contrib/%{packname}_%{version}.tar.gz
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BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
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Requires: R >= %{Rvers} R-methods R-stats R-RUnit R-Matrix
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Requires(post): R
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Requires(postun): R
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BuildRequires: R-devel >= %{Rvers} tetex-latex R-methods R-stats R-RUnit R-Matrix
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%description
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The IRanges class and its extensions are low-level containers
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for storing sets of integer ranges. A typical use of these containers
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in biology is for representing a set of chromosome regions.
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More specific extensions of the IRanges class will typically
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allow the storage of additional information attached to each
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chromosome region as well as a hierarchical relationship between
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these regions.
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%package devel
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Summary: Development files for %{name}
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Group: Development/Libraries
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Requires: %{name} = %{version}-%{release}
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%description devel
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The %{name}-devel package contains libraries and header files for
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developing applications that use %{name}.
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%prep
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%setup -q -c -n %{packname}
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%build
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%install
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rm -rf %{buildroot}
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# x86/x86_64 -> Architecture dependent package
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mkdir -p %{buildroot}%{_libdir}/R/library
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R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
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# Clean up in advance of check
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test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
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rm -rf %{buildroot}%{_libdir}/R/library/R.css
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%check
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%{_bindir}/R CMD check %{packname}
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%clean
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rm -rf %{buildroot}
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%files
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%defattr(-, root, root, -)
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%dir %{_libdir}/R/library/%{packname}/
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%doc %{_libdir}/R/library/%{packname}/doc
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%doc %{_libdir}/R/library/%{packname}/html
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%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
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%{_libdir}/R/library/%{packname}/INDEX
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%{_libdir}/R/library/%{packname}/NAMESPACE
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%{_libdir}/R/library/%{packname}/extdata
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%{_libdir}/R/library/%{packname}/Meta
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%{_libdir}/R/library/%{packname}/help
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%{_libdir}/R/library/%{packname}/R
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%{_libdir}/R/library/%{packname}/libs
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%files devel
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%defattr(-,root,root,-)
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%{_libdir}/R/library/%{packname}/include
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%changelog
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* Mon Feb 11 2010 pingou <pingou@pingoured.fr> 1.4.11-1
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- Update to 1.4.11
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* Mon Feb 01 2010 pingou <pingou@pingoured.fr> 1.4.10-1
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- Update to 1.4.10
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* Thu Dec 17 2009 pingou <pingou@pingoured.fr> 1.4.9-1
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- Update to 1.4.9
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* Sat Nov 21 2009 pingou <pingou@pingoured.fr> 1.4.7-1
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- Update to 1.4.7
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- Remove %%post and %%postun
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- Adapt %%files to R-2.10.0
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* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.2.3-2
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- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
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* Fri Jun 12 2009 pingou <pingou@pingoured.fr> 1.2.3-1
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- Update to 1.2.3
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* Wed Apr 29 2009 pingou <pingou@pingoured.fr> 1.2.0-2
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- Update the file section to package doc
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- Update the Requires and BR to take into account R version
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* Tue Apr 28 2009 pingou <pingou@pingoured.fr> 1.2.0-1
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- Update to Bioconductor 2.4 and R-2.9.0
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* Wed Apr 01 2009 pingou <pingou@pingoured.fr> 1.1.55-1
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- New release from bioconductor 2.4 which includes the change in
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the description file for the license used
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- Update the license to its correct format
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* Sun Mar 22 2009 pingou <pingou -AT- pingoured.fr> 1.0.14-3
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- The main package owns the directory
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- Remove pkgconfig as R for the devel package
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- Define becomes global
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* Sat Mar 21 2009 pingou <pingou -AT- pingoured.fr> 1.0.14-2
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- Add R-Matrix as R and BR
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* Fri Mar 13 2009 pingou <pingou -AT- pingoured.fr> 1.0.14-1
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- Update to 1.0.14
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* Wed Feb 18 2009 pingou <pingou -AT- pingoured.fr> 1.0.11-1
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- initial package for Fedora
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