dist-git conversion

#2781)

.gitignore

@@ -1,16 +1 @@
-BufferedMatrix_1.12.0.tar.gz
+BufferedMatrix_1.0.1.tar.gz
-/BufferedMatrix_1.14.0.tar.gz
-/BufferedMatrix_1.16.0.tar.gz
-/BufferedMatrix_1.18.0.tar.gz
-/BufferedMatrix_1.20.0.tar.gz
-/BufferedMatrix_1.22.0.tar.gz
-/BufferedMatrix_1.24.0.tar.gz
-/BufferedMatrix_1.26.0.tar.gz
-/BufferedMatrix_1.28.0.tar.gz
-/BufferedMatrix_1.40.0.tar.gz
-/BufferedMatrix_1.44.0.tar.gz
-/BufferedMatrix_1.50.0.tar.gz
-/BufferedMatrix_1.52.0.tar.gz
-/BufferedMatrix_1.54.0.tar.gz
-/BufferedMatrix_1.56.0.tar.gz
-/BufferedMatrix_1.60.0.tar.gz

R-BufferedMatrix.spec

@@ -1,26 +1,31 @@
-%global packname   BufferedMatrix
+
-%global Rvers      3.4.0
+%define packname   BufferedMatrix 
 
 Name:              R-%{packname}
-Version:           1.60.0
+Version:           1.0.1
-Release:           4%{dist}
+Release:           5%{?dist}
-Summary:           A matrix data storage object method from bioconductor
+Summary:           A matrix data storage object held in temporary files
 Summary(fr):       Stockage des données d'un matrice dans un fichier temporaire
-License:           LGPLv2+
+
-URL:               http://bioconductor.org/packages/release/bioc/html/BufferedMatrix.html
+Group:             Applications/Engineering
-Source0:           http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+License:           LGPL
-BuildRequires:     R-devel >= %{Rvers} tex(latex) R-methods
+URL:               http://bioconductor.org/packages/2.0/bioc/html/%{packname}.html
+Source0:           http://bioconductor.org/packages/2.0/bioc/src/contrib/%{packname}_%{version}.tar.gz 
+BuildRoot:         %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
+
+BuildRequires:    R tetex-latex 
+Requires(post):   R
+Requires(postun): R
 
 %package           devel
-Summary:           Development files for %{name}
+Summary:           Development files for %{name}	
-Requires:          %{name}%{?_isa} = %{version}-%{release}
+Group:             Development/Libraries
+Requires:          %{name} = %{version}	
 
 %description
-A tabular style data object where most data is stored outside main memory.
+A tabular style data object where most data is stored outside main memory. 
 A buffer is used to speed up access to data.
 
-This library is part of the bioconductor (bioconductor.org) project.
-
 %description -l fr
 Une table de données dans laquelle la plus part des données sont stocké,
 en dehors de la mémoire principale. Une mémoire tampon est utilisé pour
@@ -36,236 +41,64 @@ developing applications that use %{name}
 %build
 
 %install
-rm -rf %{buildroot}i
+rm -rf %{buildroot}
 sed -i -e 's/\r$//' %{packname}/inst/doc/BufferedMatrix.Rnw
 
-mkdir -p %{buildroot}%{_libdir}/R/library
+mkdir -p  $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
-%{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname}
+install -D %{packname}/inst/include/*  $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
+chmod -x $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/*
+
+mkdir -p %{buildroot}%{_libdir}/R/library 
+R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
 
-# Clean up in advance of check
 test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
 rm -rf %{buildroot}%{_libdir}/R/library/R.css
 
-## Change the header of place for the -devel --> Removed
+rm -rf %{buildroot}%{_libdir}/R/library/%{packname}/include/
-## see: https://www.redhat.com/archives/fedora-r-devel-list/2009-March/msg00001.html
-
-#mkdir -p  $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
-#install -D %{packname}/inst/include/*  $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
-#chmod -x $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/*
-#rm -rf %{buildroot}%{_libdir}/R/library/%{packname}/include/
 
 %check
 %{_bindir}/R CMD check %{packname}
 
+%clean
+rm -rf %{buildroot}
+
+%post 
+%{_R_make_search_index}
+
+%postun 
+%{_R_make_search_index}
+
 %files
+%defattr(-, root, root, -)
 %dir %{_libdir}/R/library/%{packname}
+%{_libdir}/R/library/%{packname}/CONTENTS
 %{_libdir}/R/library/%{packname}/INDEX
 %{_libdir}/R/library/%{packname}/Meta/
+%{_libdir}/R/library/%{packname}/R-ex/
 %{_libdir}/R/library/%{packname}/R/
 %{_libdir}/R/library/%{packname}/help/
 %{_libdir}/R/library/%{packname}/libs/
-%{_libdir}/R/library/%{packname}/NAMESPACE
+%doc %{_libdir}/R/library/%{packname}/man/
+%doc %{_libdir}/R/library/%{packname}/latex/
 %doc %{_libdir}/R/library/%{packname}/doc
 %doc %{_libdir}/R/library/%{packname}/DESCRIPTION
 %doc %{_libdir}/R/library/%{packname}/html
 
 %files		devel
-%{_libdir}/R/library/%{packname}/include/
+%defattr(-,root,root,-)
+%{_datadir}/R/library/%{packname}/include/
 
 
 %changelog
-* Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 1.60.0-4
-- R-maint-sig mass rebuild
-
-* Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.60.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
-
-* Tue Aug  2 2022 Tom Callaway <spot@fedoraproject.org> - 1.60.0-2
-- actually build against R 4.2.1
-
-* Tue Aug  2 2022 Tom Callaway <spot@fedoraproject.org> - 1.60.0-1
-- update to 1.60.0
-- R 4.2.1
-
-* Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.56.0-4
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
-
-* Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.56.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
-
-* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.56.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
-
-* Mon Jun  7 2021 Tom Callaway <spot@fedoraproject.org> - 1.56.0-1
-- update to 1.56.0
-- rebuild for R 4.1.0
-
-* Wed Feb  3 2021 Tom Callaway <spot@fedoraproject.org> - 1.54.0-1
-- update to 1.54.0
-
-* Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.52.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
-
-* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.52.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
-
-* Mon Jun  8 2020 Tom Callaway <spot@fedoraproject.org> - 1.52.0-1
-- update to 1.52.0
-- rebuild for R 4
-
-* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.50.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
-
-* Thu Nov  7 2019 Tom Callaway <spot@fedoraproject.org> - 1.50.0-1
-- update to 1.50.0
-
-* Mon Aug 12 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 1.44.0-5
-- Remove explicit dependencies provided by automatic dependency generator
-
-* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.0-4
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
-
-* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
-
-* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.44.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
-
-* Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 1.44.0-1
-- update to 1.44.0
-
-* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.40.0-4
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
-
-* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.40.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
-
-* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.40.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
-
-* Tue May 30 2017 Tom Callaway <spot@fedoraproject.org> - 1.40.0-1
-- update to 1.40.0
-
-* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.28.0-5
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
-
-* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.28.0-4
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
-
-* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.28.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
-
-* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.28.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
-
-* Wed Jul 02 2014 pingou <pingou@pingoured.fr> 1.28.0-1
-- Update to version 1.28.0
-
-* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.26.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
-
-* Mon Jan 27 2014 pingou <pingou@pingoured.fr> 1.26.0-1
-- Update to version 1.26.0
-
-* Fri Aug 02 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.24.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
-
-* Sun Apr 07 2013 pingou <pingou@pingoured.fr> 1.24.0-1
-- Update to version 1.24.0
-
-* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
-
-* Tue Nov 27 2012 pingou <pingou@pingoured.fr> 1.22.0-1
-- Update to version 1.22.0
-
-* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.20.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
-
-* Thu Apr 26 2012 pingou <pingou@pingoured.fr> 1.20.0-1
-- Update to version 1.20.0
-
-* Thu Jan 12 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.18.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild
-
-* Wed Nov  9 2011 Tom Callaway <spot@fedoraproject.org> 1.18.0-2
-- rebuild for R 2.14.0
-
-* Thu Nov 03 2011 pingou <pingou@pingoured.fr> 1.18.0-1
-- Update to version 1.18.0
-
-* Wed Jun 22 2011 pingou <pingou@pingoured.fr> 1.16.0-1
-- Update to version 1.16.0
-
-* Mon Feb 07 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.14.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
-
-* Tue Oct 26 2010 pingou <pingou@pingoured.fr> 1.14.0-1
-- Update to version 1.14.0
-
-* Tue May 11 2010 pingou <pingou@pingoured.fr> 1.12.0-1
-- Update to version 1.12.0
-- Fix R and BR (R-core tex(latex))
-- Remove R for post/postun
-
-* Sat Nov 21 2009 pingou <pingou@pingoured.fr> 1.10.0-1
-- Update to 1.10.0
-- Remove %%post and %%postun
-- Adapt %%files to R-2.10.0
-
-* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.8.0-2
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
-
-* Tue Apr 28 2009 pingou <pingou@pingoured.fr> 1.8.0-1
-- Update to Bioconductor 2.4 and R-2.9.0
-
-* Sun Mar 22 2009 pingou <pingou@pingoured.fr> - 1.6.0-2
-- -devel should contain only the folder include  !
-
-* Sat Mar 21 2009 pingou <pingou@pingoured.fr> - 1.6.0-1
-- Update to Biocondutor 2.3
-- Put back the headers to libdir instead of moving them to datadir
-
-* Mon Feb 23 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.4.0-3
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
-
-* Mon Dec 01 2008 Pingou <pingoufc4@yahoo.fr> 1.4.0-2
-- Change own directory -- #473617
-
-* Fri May 02 2008 Pingou <pingoufc4@yahoo.fr> 1.4.0-1
-- Update to bioconductor 2.2
-
-* Tue Feb 19 2008 Fedora Release Engineering <rel-eng@fedoraproject.org> - 1.2.0-5
-- Autorebuild for GCC 4.3
-
-* Sat Feb 09 2008 Pingou <pingoufc4@yahoo.fr> 1.2.0-4
-- Typo error on the changelog
-
-* Sat Feb 09 2008 Pingou <pingoufc4@yahoo.fr> 1.2.0-3
-- Change the URL
-
-* Tue Jan 08 2008 Pingou <pingoufc4@yahoo.fr> 1.2.0-2
-- Change on the BR
-
-* Tue Nov 27 2007 Pingou <pingoufc4@yahoo.fr> 1.2.0-1
-- Update to version 1.2.0
-
-* Wed Aug 29 2007 Fedora Release Engineering <rel-eng at fedoraproject dot org> - 1.0.1-6
-- Rebuild for selinux ppc32 issue.
-
 * Wed Jul 11 2007 Pingou <pingoufc4@yahoo.fr> 1.0.1-5
 - Change in the files section to fit the guidelines
-
 * Wed Jul 11 2007 Pingou <pingoufc4@yahoo.fr> 1.0.1-4
 - Change in the spec to remove the %%{__**} form in the macro
-
 * Tue Jul 10 2007 Pingou <pingoufc4@yahoo.fr> 1.0.1-3
 - Change in post and postun to fit the packaging guidelines
 - Change in the prep section to fit the guidelines
-
 * Thu Jul 05 2007 Pingou <pingoufc4@yahoo.fr> 1.0.1-2
 - Fix install include
-
 * Mon Jul 02 2007 Pingou <pingoufc4@yahoo.fr> 1.0.1-1
 - initial package for Fedora
 

sources

@@ -1 +1 @@
-SHA512 (BufferedMatrix_1.60.0.tar.gz) = 120570cb6cbe7fd86d4ccaf835cc0c5399e9fe6cb354c522b1b50a8d7ac1a17f78e409f28814095b78b07588dd980e8fa9051cc6b036808dcd90063c87ad18a5
+19a3b05f880f26bababd9e7aede9f41f  BufferedMatrix_1.0.1.tar.gz