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new version from bioc 2.3

This commit is contained in:
Pierre-YvesChibon 2009-03-21 18:43:26 +00:00
parent 833aac1d78
commit 7befc5b7de
3 changed files with 21 additions and 15 deletions
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2
.cvsignore
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@ -1 +1 @@
BufferedMatrix_1.4.0.tar.gz
BufferedMatrix_1.6.0.tar.gz

32
R-BufferedMatrix.spec
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@ -1,16 +1,16 @@
%define packname BufferedMatrix
%define bioc 2.2
%define bioc 2.3
Name: R-%{packname}
Version: 1.4.0
Release: 3%{?dist}
Version: 1.6.0
Release: 1%{?dist}
Summary: A matrix data storage object method from bioconductor
Summary(fr): Stockage des données d'un matrice dans un fichier temporaire
Group: Applications/Engineering
License: LGPLv2+
URL: http://bioconductor.org/packages/2.2/bioc/html/BufferedMatrix.html
Source0: http://bioconductor.org/packages/%{bioc}/bioc/src/contrib/%{packname}_%{version}.tar.gz
URL: http://bioconductor.org/packages/release/bioc/html/BufferedMatrix.html
Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: R-devel tetex-latex
@ -43,20 +43,22 @@ developing applications that use %{name}
%build
%install
rm -rf %{buildroot}
rm -rf %{buildroot}i
sed -i -e 's/\r$//' %{packname}/inst/doc/BufferedMatrix.Rnw
mkdir -p $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
install -D %{packname}/inst/include/* $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
chmod -x $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/*
mkdir -p %{buildroot}%{_libdir}/R/library
R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
%{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library %{packname}
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_libdir}/R/library/R.css
rm -rf %{buildroot}%{_libdir}/R/library/%{packname}/include/
## Change the header of place for the -devel --> Removed
## see: https://www.redhat.com/archives/fedora-r-devel-list/2009-March/msg00001.html
#mkdir -p $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
#install -D %{packname}/inst/include/* $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/
#chmod -x $RPM_BUILD_ROOT%{_datadir}/R/library/%{packname}/include/*
#rm -rf %{buildroot}%{_libdir}/R/library/%{packname}/include/
%check
%{_bindir}/R CMD check %{packname}
@ -89,10 +91,14 @@ rm -rf %{buildroot}
%files devel
%defattr(-,root,root,-)
%{_datadir}/R/library/%{packname}/
%{_libdir}/R/library/%{packname}/
%changelog
* Sat Mar 21 2009 pingou <pingou@pingoured.fr> - 1.6.0-1
- Update to Biocondutor 2.3
- Put back the headers to libdir instead of moving them to datadir
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.4.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild

2
sources
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d8f909044a4a988a4e524d5baeada30a BufferedMatrix_1.4.0.tar.gz
271c40c97fd51495851d92f82b6bb9b6 BufferedMatrix_1.6.0.tar.gz