Mock Version: 1.4.13 Mock Version: 1.4.13 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-BiocParallel.spec'], chrootPath='/var/lib/mock/f30-build-39077-22375/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=345600uid=995gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-BiocParallel.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 Wrote: /builddir/build/SRPMS/R-BiocParallel-1.14.1-2.fc30.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-BiocParallel.spec'], chrootPath='/var/lib/mock/f30-build-39077-22375/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=345600uid=995gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-BiocParallel.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.wANdn0 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf BiocParallel + /usr/bin/mkdir -p BiocParallel + cd BiocParallel + /usr/bin/gzip -dc /builddir/build/SOURCES/BiocParallel_1.14.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + chmod -x BiocParallel/inst/snow/RMPInode.R + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.ZBJ3bR + umask 022 + cd /builddir/build/BUILD + cd BiocParallel + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.SeImk1 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64 + cd BiocParallel + mkdir -p /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64/usr/lib64/R/library BiocParallel BUILDSTDERR: * installing *source* package 'BiocParallel' ... BUILDSTDERR: ** libs g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I"/usr/share/R/library/BH/include" -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ipcmutex.cpp -o ipcmutex.o BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/mpl/aux_/na_assert.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/mpl/arg.hpp:25, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/mpl/placeholders.hpp:24, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/iterator/iterator_categories.hpp:16, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/iterator/iterator_facade.hpp:13, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/detail/seed_rng.hpp:38, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:12, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/mpl/assert.hpp:188:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses] BUILDSTDERR: failed ************ (Pred::************ BUILDSTDERR: ^ BUILDSTDERR: /usr/share/R/library/BH/include/boost/mpl/assert.hpp:193:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses] BUILDSTDERR: failed ************ (boost::mpl::not_::************ BUILDSTDERR: ^ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:28, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/detail/shared_count.hpp:355:33: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: shared_ptr( std::auto_ptr && r ): px(r.get()), pn() BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: shared_ptr & operator=( std::auto_ptr & r ) BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: shared_ptr & operator=( std::auto_ptr && r ) BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)': BUILDSTDERR: /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] BUILDSTDERR: this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: In file included from /usr/include/c++/8/memory:80, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/config/no_tr1/memory.hpp:21, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/smart_ptr/shared_ptr.hpp:23, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/shared_ptr.hpp:17, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/random_generator.hpp:18, BUILDSTDERR: from /usr/share/R/library/BH/include/boost/uuid/uuid_generators.hpp:17, BUILDSTDERR: from ipcmutex.cpp:1: BUILDSTDERR: /usr/include/c++/8/bits/unique_ptr.h:53:28: note: declared here BUILDSTDERR: template class auto_ptr; BUILDSTDERR: ^~~~~~~~ g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o BiocParallel.so ipcmutex.o -L/usr/lib64/R/lib -lR BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64/usr/lib64/R/library/BiocParallel/libs BUILDSTDERR: ** R BUILDSTDERR: ** inst BUILDSTDERR: ** byte-compile and prepare package for lazy loading BUILDSTDERR: ** help BUILDSTDERR: *** installing help indices converting help for package 'BiocParallel' BUILDSTDERR: finding HTML links ... done BatchJobsParam-class html BatchtoolsParam-class html BiocParallel-package html BiocParallelParam-class html DoparParam-class html MulticoreParam-class html SerialParam-class html SnowParam-class html bpaggregate html bpiterate html bplapply html bploop html bpmapply html bpok html bpschedule html bptry html bpvalidate html bpvec html bpvectorize html ipcmutex html register html BUILDSTDERR: ** building package indices BUILDSTDERR: ** installing vignettes BUILDSTDERR: ** testing if installed package can be loaded Error: package or namespace load failed for 'BiocParallel' in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64/usr/lib64/R/library/BiocParallel/libs/BiocParallel.so': /builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64/usr/lib64/R/library/BiocParallel/libs/BiocParallel.so: undefined symbol: shm_open Error: loading failed Execution halted BUILDSTDERR: ERROR: loading failed BUILDSTDERR: * removing '/builddir/build/BUILDROOT/R-BiocParallel-1.14.1-2.fc30.riscv64/usr/lib64/R/library/BiocParallel' BUILDSTDERR: error: Bad exit status from /var/tmp/rpm-tmp.SeImk1 (%install) RPM build errors: BUILDSTDERR: Bad exit status from /var/tmp/rpm-tmp.SeImk1 (%install) Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.7/site-packages/mockbuild/trace_decorator.py", line 96, in trace result = func(*args, **kw) File "/usr/lib/python3.7/site-packages/mockbuild/util.py", line 636, in do raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-BiocParallel.spec