Mock Version: 1.4.21
Mock Version: 1.4.21
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/seqan.spec'], chrootPath='/var/lib/mock/f33-build-181415-45235/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fb8242700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/seqan.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1581033600
Wrote: /builddir/build/SRPMS/seqan-1.4.2-40.fc33.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/seqan.spec'], chrootPath='/var/lib/mock/f33-build-181415-45235/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fb8242700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/seqan.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1581033600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.l1kOiY
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf seqan-1.4.2
+ /usr/bin/tar -xof -
+ /usr/bin/gzip -dc /builddir/build/SOURCES/seqan-src-1.4.2.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd seqan-1.4.2
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (seqan-docpath.patch):'
Patch #0 (seqan-docpath.patch):
+ /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0
patching file util/cmake/SeqAnBuildSystem.cmake
+ echo 'Patch #1 (seqan-exclude_splazers_fiona_tests.patch):'
Patch #1 (seqan-exclude_splazers_fiona_tests.patch):
+ /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0
patching file core/apps/splazers/CMakeLists.txt
patching file core/apps/fiona/CMakeLists.txt
+ find . -type f -name '*.h' -exec chmod 0644 '{}' ';'
+ find . -type f -name '*.cpp' -exec chmod 0644 '{}' ';'
+ cp -p extras/apps/rep_sep/LICENSE LGPLv3+.txt
+ cp -p core/apps/rabema/LICENSE GPLv3+.txt
+ cp -p LICENSE BSD.txt
+ cp -p extras/apps/seqan_flexbar/INFO extras/apps/seqan_flexbar/README
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EmG4NX
+ umask 022
+ cd /builddir/build/BUILD
+ cd seqan-1.4.2
+ mkdir -p build/Release
+ pushd build/Release
~/build/BUILD/seqan-1.4.2/build/Release ~/build/BUILD/seqan-1.4.2
+ SEQAN_OPT_FLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC'
+ export 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -lemon'
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -lemon'
+ export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -fPIC'
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -fPIC'
+ cmake '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC' -DCMAKE_INSTALL_PREFIX:PATH=/usr -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_BUILD_TYPE:STRING=Release -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_APPS -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_APP_VERSION:STRING=1.4.2 -DZLIB_INCLUDE_DIR:PATH=/usr/include '-DZLIB_LIBRARY:FILEPATH=-L/usr/lib64 -lz' -DBZIP2_INCLUDE_DIR:PATH=/usr/include '-DBZIP2_LIBRARY:FILEPATH=-L/usr/lib64 -lbz2' -DLEMON_INCLUDE_DIR:PATH=/usr/include '-DLEMON_LIBRARY:FILEPATH=-L/usr/lib64 -lemon' -DBoost_INCLUDE_DIR:PATH=/usr/include -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE ../..
-- The C compiler identification is GNU 10.0.1
-- The CXX compiler identification is GNU 10.0.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - failed
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- broken
CMake Error at /usr/share/cmake/Modules/CMakeTestCXXCompiler.cmake:53 (message):
  The C++ compiler
    "/usr/bin/c++"
  is not able to compile a simple test program.
  It fails with the following output:
    Change Dir: /builddir/build/BUILD/seqan-1.4.2/build/Release/CMakeFiles/CMakeTmp
    
    Run Build Command(s):/usr/bin/gmake cmTC_88c5a/fast && /usr/bin/gmake -f CMakeFiles/cmTC_88c5a.dir/build.make CMakeFiles/cmTC_88c5a.dir/build
    gmake[1]: Entering directory '/builddir/build/BUILD/seqan-1.4.2/build/Release/CMakeFiles/CMakeTmp'
    Building CXX object CMakeFiles/cmTC_88c5a.dir/testCXXCompiler.cxx.o
    /usr/bin/c++    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -lemon    -o CMakeFiles/cmTC_88c5a.dir/testCXXCompiler.cxx.o -c /builddir/build/BUILD/seqan-1.4.2/build/Release/CMakeFiles/CMakeTmp/testCXXCompiler.cxx
    Linking CXX executable cmTC_88c5a
    /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_88c5a.dir/link.txt --verbose=1
    /usr/bin/c++  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -lemon   -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -fPIC  -rdynamic CMakeFiles/cmTC_88c5a.dir/testCXXCompiler.cxx.o  -o cmTC_88c5a 
    /usr/bin/ld: /usr/lib64/libCbc.so.3: undefined reference to `CglPreProcess::postProcess(OsiSolverInterface&, bool)'
    collect2: error: ld returned 1 exit status
    gmake[1]: *** [CMakeFiles/cmTC_88c5a.dir/build.make:87: cmTC_88c5a] Error 1
    gmake[1]: Leaving directory '/builddir/build/BUILD/seqan-1.4.2/build/Release/CMakeFiles/CMakeTmp'
    gmake: *** [Makefile:121: cmTC_88c5a/fast] Error 2
    
    
  
  CMake will not be able to correctly generate this project.
Call Stack (most recent call first):
  CMakeLists.txt:9 (project)
-- Configuring incomplete, errors occurred!
See also "/builddir/build/BUILD/seqan-1.4.2/build/Release/CMakeFiles/CMakeOutput.log".
See also "/builddir/build/BUILD/seqan-1.4.2/build/Release/CMakeFiles/CMakeError.log".
error: Bad exit status from /var/tmp/rpm-tmp.EmG4NX (%build)
RPM build errors:
    Bad exit status from /var/tmp/rpm-tmp.EmG4NX (%build)
Child return code was: 1
EXCEPTION: [Error()]
Traceback (most recent call last):
  File "/usr/lib/python3.8/site-packages/mockbuild/trace_decorator.py", line 95, in trace
    result = func(*args, **kw)
  File "/usr/lib/python3.8/site-packages/mockbuild/util.py", line 746, in do_with_status
    raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode)
mockbuild.exception.Error: Command failed: 
 # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/seqan.spec