Mock Version: 3.5 Mock Version: 3.5 Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target riscv64 --nodeps /builddir/build/SPECS/packmol.spec'], chrootPath='/var/lib/mock/f41-build-834441-158251/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target riscv64 --nodeps /builddir/build/SPECS/packmol.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721260800 Wrote: /builddir/build/SRPMS/packmol-20.14.2-5.fc41.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target riscv64 --nodeps /builddir/build/SPECS/packmol.spec'], chrootPath='/var/lib/mock/f41-build-834441-158251/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target riscv64 --nodeps /builddir/build/SPECS/packmol.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721260800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.3uhUXx + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + test -d /builddir/build/BUILD/packmol-20.14.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/packmol-20.14.2-build + /usr/bin/rm -rf /builddir/build/BUILD/packmol-20.14.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/packmol-20.14.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/packmol-20.14.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.tbzgcx + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + cd /builddir/build/BUILD/packmol-20.14.2-build + rm -rf packmol-20.14.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/packmol-20.14.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd packmol-20.14.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find . -name '*.o' -delete + tar zxvf /builddir/build/SOURCES/examples.tar.gz ./examples/ ./examples/SOD.pdb ./examples/spherical-comment.inp ./examples/water.xyz ./examples/urea.pdb ./examples/t3.xyz ./examples/mixture.inp ./examples/interface.inp ./examples/interface-comment.inp ./examples/bilayer.inp ./examples/water.pdb ./examples/chlor.xyz ./examples/solvprotein-comment.inp ./examples/spherical.inp ./examples/mixture-comment.inp ./examples/bilayer-comment.inp ./examples/protein.pdb ./examples/CLA.pdb ./examples/palmitoil.pdb ./examples/solvprotein.inp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.rCD3kY + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd packmol-20.14.2 + export FC=gfortran + FC=gfortran + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The Fortran compiler identification is GNU 14.1.1 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/gfortran - skipped -- Configuring done (2.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: BUILD_SHARED_LIBS CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build + /usr/bin/cmake --build redhat-linux-build -j4 --verbose Change Dir: '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j4 /usr/bin/cmake -S/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2 -B/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' cd /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2 /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2 /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles/packmol.dir/DependInfo.cmake "--color=" Dependee "/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles/packmol.dir/depend.internal". Dependee "/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles/packmol.dir/depend.internal". Scanning dependencies of target packmol gmake[2]: Leaving directory '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' /usr/bin/gmake -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/swaptypemod.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/ahestetic.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/sizes.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/exit_codes.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/ahestetic.f90 -o CMakeFiles/packmol.dir/src/ahestetic.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/sizes.f90 -o CMakeFiles/packmol.dir/src/sizes.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/swaptypemod.f90 -o CMakeFiles/packmol.dir/src/swaptypemod.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/exit_codes.f90 -o CMakeFiles/packmol.dir/src/exit_codes.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/flashsort.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/gencan.f.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/setibox.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan_ieee_signal_routines.f90 -o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/setibox.f90 -o CMakeFiles/packmol.dir/src/setibox.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/flashsort.f90 -o CMakeFiles/packmol.dir/src/flashsort.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f -o CMakeFiles/packmol.dir/src/gencan.f.o [ 22%] Building Fortran object CMakeFiles/packmol.dir/src/jacobi.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/jacobi.f90 -o CMakeFiles/packmol.dir/src/jacobi.f90.o [ 25%] Building Fortran object CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/random.f90 -o CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument ‘lambda’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument ‘rho’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2593:40: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument ‘infabs’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2593:33: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument ‘infrel’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2593:12: 2593 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument ‘steabs’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2592:71: 2592 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument ‘sterel’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3827:61: 3827 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument ‘infabs’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3827:54: 3827 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument ‘infrel’ at (1) [-Wunused-dummy-argument] /usr/bin/cmake -E cmake_copy_f90_mod exit_codes.mod CMakeFiles/packmol.dir/exit_codes.mod.stamp GNU /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument ‘lambda’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument ‘rho’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2989:19: 2989 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument ‘infrel’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:5187:19: 5187 | +steabs,inform) | 1 Warning: Unused dummy argument ‘inform’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:5186:52: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument ‘lambda’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:5186:56: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument ‘rho’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:5187:12: 5187 | +steabs,inform) | 1 Warning: Unused dummy argument ‘steabs’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:5186:71: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument ‘sterel’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:5186:64: 5186 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument ‘xtmp’ at (1) [-Wunused-dummy-argument] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument ‘n’ at (1) [-Wunused-dummy-argument] [ 27%] Building Fortran object CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/flashmod.f90 -o CMakeFiles/packmol.dir/src/flashmod.f90.o [ 30%] Building Fortran object CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/input.f90 -o CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/sizes.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU [ 32%] Building Fortran object CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o [ 35%] Building Fortran object CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/title.f90 -o CMakeFiles/packmol.dir/src/title.f90.o [ 37%] Building Fortran object CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/ahestetic.f90.o.provides.build [ 40%] Building Fortran object CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/exit_codes.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/swaptypemod.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU [ 42%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build [ 45%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o [ 47%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 50%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o [ 52%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o [ 55%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/getinp.f90:962:11: 962 | if(ires.ne.ireslast) then | ^ Warning: ‘ireslast’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/getinp.f90:947:34: 947 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: ‘ireslast’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: ‘alpha’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3243:31: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: ‘alpha’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3502:72: 3502 | amax = min( amax1 , amax2 ) | ^ Warning: ‘amax1’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3243:42: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: ‘amax1’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3503:72: 3503 | amaxn = max( amax1n, amax2n ) | ^ Warning: ‘amax1n’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3243:49: 3243 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: ‘amax1n’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: ‘dnorm2’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3244:67: 3244 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: ‘dnorm2’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: ‘dtr’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3244:71: 3244 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: ‘dtr’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3361:72: 3361 | + beta ** 2 * dnorm2 | ^ Warning: ‘dtw’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3245:21: 3245 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: ‘dtw’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3354:72: 3354 | beta = rnorm2 / rnorm2prev | ^ Warning: ‘rnorm2prev’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3246:24: 3246 | + rnorm2prev,snorm2,snorm2prev | ^ note: ‘rnorm2prev’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3651:72: 3651 | rbdind = rbdposaind | ^ Warning: ‘rbdposaind’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3242:56: 3242 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: ‘rbdposaind’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3658:14: 3658 | if ( rbdtype .eq. 1 ) then | ^ Warning: ‘rbdposatype’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:3242:68: 3242 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: ‘rbdposatype’ was declared here [ 57%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o [ 60%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/output.f90:571:32: 571 | nres = ilres - ifres + 1 | ^ Warning: ‘ilres’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/output.f90:18:53: 18 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: ‘ilres’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2140:72: 2140 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: ‘sts’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: ‘sts’ was declared here /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:2312:35: 2312 | if ( iter .eq. 1 .or. sty .le. 0.0d0 ) then | ^ Warning: ‘sty’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: ‘sty’ was declared here [ 62%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o [ 65%] Building Fortran object CMakeFiles/packmol.dir/src/fparc.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/fparc.f90 -o CMakeFiles/packmol.dir/src/fparc.f90.o [ 67%] Building Fortran object CMakeFiles/packmol.dir/src/gparc.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 70%] Building Fortran object CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o [ 72%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o [ 75%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 77%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o [ 80%] Building Fortran object CMakeFiles/packmol.dir/src/resetboxes.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o [ 85%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 87%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o [ 90%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/app/packmol.f90:346:44: 346 | iratom(icart,iratcount) = iirest | ^ Warning: ‘iirest’ may be used uninitialized [-Wmaybe-uninitialized] /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/app/packmol.f90:50:42: 50 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: ‘iirest’ was declared here [ 95%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG -Wall -c /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/compute_data.f90.o.provides.build [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/gfortran -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -DNDEBUG CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/gencan_ieee_signal_routines.f90.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol gmake[2]: Leaving directory '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' [100%] Built target packmol gmake[1]: Leaving directory '/builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/redhat-linux-build/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BwnX2p + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + '[' /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/packmol-20.14.2-build + mkdir /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd packmol-20.14.2 + DESTDIR=/builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT + /usr/bin/cmake --install redhat-linux-build -- Install configuration: "Release" -- Installing: /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/bin/packmol + install -D -p -m 755 solvate.tcl /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/bin/packmol_solvate + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 20.14.2-5.fc41 --unique-debug-suffix -20.14.2-5.fc41.riscv64 --unique-debug-src-base packmol-20.14.2-5.fc41.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/packmol-20.14.2-5.fc41.riscv64 811 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT Scanned 13 directories and 42 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/packmol-20.14.2-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.YUTq4e + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd packmol-20.14.2 + cd examples + for f in interface.inp ++ basename interface.inp .inp + out=interface.out + ../redhat-linux-build/packmol + tee interface.out ################################################################################ PACKMOL - Packing optimization for the automated generation of starting configurations for molecular dynamics simulations. Version 20.14.2 ################################################################################ Packmol must be run with: packmol < inputfile.inp Userguide at: http://m3g.iqm.unicamp.br/packmol Reading input file... (Control-C aborts) Types of coordinate files specified: xyz Warning: Number of molecules not set for type 3 : assuming 1 Seed for random number generator: 1234567 Output file: interface.xyz Reading coordinate file: water.xyz Reading coordinate file: chlor.xyz Reading coordinate file: t3.xyz Number of independent structures: 3 The structures are: Structure 1 :water( 3 atoms) Structure 2 :CCl4( 5 atoms) Structure 3 :T3( 35 atoms) Maximum number of GENCAN loops for all molecule packing: 600 Total number of restrictions: 3 Distance tolerance: 2.0000000000000000 Number of molecules of type 1 : 1019 Number of molecules of type 2 : 199 Number of molecules of type 3 : 1 Total number of atoms: 4087 Molecule T3( 3 ) will be fixed. Total number of molecules: 1219 Number of fixed molecules: 1 Number of free molecules: 1218 Number of variables: 7308 Total number of fixed atoms: 35 Maximum internal distance of type 1 : 1.6330450000000001 Maximum internal distance of type 2 : 2.8577382551656125 All atoms must be within these coordinates: x: [ -1000.3771538491685 , 999.62284615083149 ] y: [ -999.20000000000005 , 1000.8000000000000 ] z: [ -1000.0000000000000 , 1000.0000000000000 ] If the system is larger than this, increase the sidemax parameter. ################################################################################ Building initial approximation ... ################################################################################ Adjusting initial point to fit the constraints -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Molecules of type: 1 Packing:|0 100%| |****************************************** Restraint-only function value: 1.8666928861973220E-003 Maximum violation of the restraints: 7.0162509547696096E-004 -------------------------------------------------------------------------------- Molecules of type: 2 Packing:|0 100%| |*********************************** Restraint-only function value: 1.3525595213396404E-002 Maximum violation of the restraints: 8.8109119935565871E-003 -------------------------------------------------------------------------------- Rescaling maximum and minimum coordinates... Computing size of patches... Add fixed molecules to permanent arrays... Reseting center of mass... -------------------------------------------------------------------------------- Setting initial trial coordinates ... -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Molecules of type: 1 Adjusting random positions to fit the constraints. Packing:|0 100%| | Restraint-only function value: 1.3721435213145587E-002 Maximum violation of the restraints: 4.4799691167933609E-003 -------------------------------------------------------------------------------- Molecules of type: 2 Adjusting random positions to fit the constraints. Packing:|0 100%| |******* Restraint-only function value: 0.0000000000000000 Maximum violation of the restraints: 0.0000000000000000 ################################################################################ Objective function at initial point: 20258.862327739364 ################################################################################ Packing molecules of type: 1 ################################################################################ -------------------------------------------------------------------------------- Starting GENCAN loop: 0 Scaling radii by: 1.1000000000000001 Packing:|0 100%| |******************************************************************| |************************************************* Function value from last GENCAN loop: f = .12230E-01 Best function value before: f = .17715E+05 Improvement from best function value: 99.99 % Improvement from last loop: 99.99 % Maximum violation of target distance: 0.000000 Maximum violation of the constraints: .52045E-02 Current structure written to file: interface.xyz -------------------------------------------------------------------------------- Packing solved for molecules of type 1 Objective function value: 1.2229951485792988E-002 Maximum violation of target distance: 0.0000000000000000 Max. constraint violation: 5.2045151310550538E-003 -------------------------------------------------------------------------------- ################################################################################ Packing molecules of type: 2 ################################################################################ -------------------------------------------------------------------------------- Starting GENCAN loop: 0 Scaling radii by: 1.1000000000000001 Packing:|0 100%| |******************************************************************| |************** Function value from last GENCAN loop: f = .10865E-01 Best function value before: f = .25291E+04 Improvement from best function value: 99.99 % Improvement from last loop: 99.99 % Maximum violation of target distance: 0.000000 Maximum violation of the constraints: .59319E-02 Current structure written to file: interface.xyz -------------------------------------------------------------------------------- Packing solved for molecules of type 2 Objective function value: 1.0865429800200417E-002 Maximum violation of target distance: 0.0000000000000000 Max. constraint violation: 5.9319469553619480E-003 -------------------------------------------------------------------------------- ################################################################################ Packing all molecules together ################################################################################ -------------------------------------------------------------------------------- Starting GENCAN loop: 0 Scaling radii by: 1.1000000000000001 Packing:|0 100%| |******************************************************** Function value from last GENCAN loop: f = .85665E-02 Best function value before: f = .15442E+03 Improvement from best function value: 99.99 % Improvement from last loop: 99.99 % Maximum violation of target distance: 0.000000 Maximum violation of the constraints: .34539E-02 ################################################################################ Success! Final objective function value: .85665E-02 Maximum violation of target distance: 0.000000 Maximum violation of the constraints: .34539E-02 -------------------------------------------------------------------------------- Please cite this work if Packmol was useful: L. Martinez, R. Andrade, E. G. Birgin, J. M. Martinez, PACKMOL: A package for building initial configurations for molecular dynamics simulations. Journal of Computational Chemistry, 30:2157-2164,2009. ################################################################################ Solution written to file: interface.xyz -------------------------------------------------------------------------------- Running time: 7.43818378 seconds. -------------------------------------------------------------------------------- ++ grep Success interface.out ++ wc -l + ok=1 + (( ! 1 )) + RPM_EC=0 ++ jobs -p + exit 0 Processing files: packmol-20.14.2-5.fc41.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.DU11dR + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + cd packmol-20.14.2 + DOCDIR=/builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/share/doc/packmol + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/share/doc/packmol + cp -pr /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/AUTHORS /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/share/doc/packmol + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.qn6wcK + umask 022 + cd /builddir/build/BUILD/packmol-20.14.2-build + cd packmol-20.14.2 + LICENSEDIR=/builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/share/licenses/packmol + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/share/licenses/packmol + cp -pr /builddir/build/BUILD/packmol-20.14.2-build/packmol-20.14.2/LICENSE /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT/usr/share/licenses/packmol + RPM_EC=0 ++ jobs -p + exit 0 Provides: packmol = 20.14.2-5.fc41 packmol(riscv-64) = 20.14.2-5.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/tclsh ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.34)(64bit) libgfortran.so.5()(64bit) libgfortran.so.5(GFORTRAN_10)(64bit) libgfortran.so.5(GFORTRAN_8)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: packmol-debugsource-20.14.2-5.fc41.riscv64 Provides: packmol-debugsource = 20.14.2-5.fc41 packmol-debugsource(riscv-64) = 20.14.2-5.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: packmol-debuginfo-20.14.2-5.fc41.riscv64 Provides: debuginfo(build-id) = ac1681a227c1e67dc64733ea7b1b5e2483a2c42a packmol-debuginfo = 20.14.2-5.fc41 packmol-debuginfo(riscv-64) = 20.14.2-5.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: packmol-debugsource(riscv-64) = 20.14.2-5.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/packmol-20.14.2-build/BUILDROOT Wrote: /builddir/build/RPMS/packmol-20.14.2-5.fc41.riscv64.rpm Wrote: /builddir/build/RPMS/packmol-debuginfo-20.14.2-5.fc41.riscv64.rpm Wrote: /builddir/build/RPMS/packmol-debugsource-20.14.2-5.fc41.riscv64.rpm Child return code was: 0