Mock Version: 2.15 Mock Version: 2.15 Mock Version: 2.15 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R.spec'], chrootPath='/var/lib/mock/f38-build-686180-81132/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=604800uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1677456000 Wrote: /builddir/build/SRPMS/R-4.2.2-7.0.riscv64.fc38.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R.spec'], chrootPath='/var/lib/mock/f38-build-686180-81132/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=604800uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1677456000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.356onK + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf R-4.2.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/R-4.2.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd R-4.2.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (R-3.3.0-fix-java_path-in-javareconf.patch):' Patch #0 (R-3.3.0-fix-java_path-in-javareconf.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fixpath --fuzz=0 patching file src/scripts/javareconf.in Hunk #1 succeeded at 79 (offset 1 line). + cat + chmod +x /builddir/build/BUILD/R-4.2.2/R-prov + cat + chmod +x /builddir/build/BUILD/R-4.2.2/R-req + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.TpSYVF + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.2.2 + sed -i -e '/R_LIBS_SITE=/s/^/#/g' etc/Renviron.in + echo 'R_LIBS_SITE=${R_LIBS_SITE-'\''/usr/local/lib/R/site-library:/usr/local/lib/R/library:/usr/lib64/R/library:/usr/share/R/library'\''}' + export R_PDFVIEWER=/usr/bin/xdg-open + R_PDFVIEWER=/usr/bin/xdg-open + export R_PRINTCMD=lpr + R_PRINTCMD=lpr + export R_BROWSER=/usr/bin/xdg-open + R_BROWSER=/usr/bin/xdg-open + export JAVA_HOME=/usr/lib/jvm/jre + JAVA_HOME=/usr/lib/jvm/jre + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' x '!=' x ']' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./tools/config.sub ++ basename ./tools/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./tools/config.sub '/usr/lib/rpm/redhat/config.sub' -> './tools/config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./tools/config.guess ++ basename ./tools/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./tools/config.guess '/usr/lib/rpm/redhat/config.guess' -> './tools/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./tools/ltmain.sh + tee CONFIGURE.log ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info rdocdir=/usr/share/doc/R rincludedir=/usr/include/R rsharedir=/usr/share/R --with-system-tre --with-lapack=flexiblas --with-blas=flexiblas --with-tcl-config=/usr/lib64/tclConfig.sh --with-tk-config=/usr/lib64/tkConfig.sh --enable-R-shlib --enable-prebuilt-html --enable-R-profiling --enable-memory-profiling configure: WARNING: unrecognized options: --disable-dependency-tracking checking build system type... riscv64-redhat-linux-gnu checking host system type... riscv64-redhat-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /usr/bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /usr/bin/sed checking for which... /usr/bin/which checking for less... /usr/bin/less checking for gtar... /usr/bin/gtar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... no checking for install-info... /usr/sbin/install-info checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /usr/bin/gzip checking for bzip2... /usr/bin/bzip2 using default browser ... /usr/bin/xdg-open checking for /usr/bin/xdg-open... /usr/bin/xdg-open checking for working aclocal... found checking for working autoconf... found checking for working autoheader... found checking for bison... no checking for byacc... no checking for yacc... no checking for notangle... false checking for realpath... /usr/bin/realpath checking for pkg-config... /usr/bin/pkg-config checking for riscv64-redhat-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking whether gcc needs -traditional... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking for sys/time.h... yes checking for sys/param.h... yes checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking how to run the C preprocessor... gcc -E looking for a modern Fortran compiler checking for riscv64-redhat-linux-gnu-gfortran... no checking for riscv64-redhat-linux-gnu-g95... no checking for riscv64-redhat-linux-gnu-xlf95... no checking for riscv64-redhat-linux-gnu-f95... no checking for riscv64-redhat-linux-gnu-fort... no checking for riscv64-redhat-linux-gnu-ifort... no checking for riscv64-redhat-linux-gnu-ifc... no checking for riscv64-redhat-linux-gnu-efc... no checking for riscv64-redhat-linux-gnu-pgfortran... no checking for riscv64-redhat-linux-gnu-pgf95... no checking for riscv64-redhat-linux-gnu-lf95... no checking for riscv64-redhat-linux-gnu-ftn... no checking for riscv64-redhat-linux-gnu-nagfor... no checking for riscv64-redhat-linux-gnu-xlf90... no checking for riscv64-redhat-linux-gnu-f90... no checking for riscv64-redhat-linux-gnu-pgf90... no checking for riscv64-redhat-linux-gnu-pghpf... no checking for riscv64-redhat-linux-gnu-epcf90... no checking for riscv64-redhat-linux-gnu-g77... no checking for riscv64-redhat-linux-gnu-xlf... no checking for riscv64-redhat-linux-gnu-f77... no checking for riscv64-redhat-linux-gnu-frt... no checking for riscv64-redhat-linux-gnu-pgf77... no checking for riscv64-redhat-linux-gnu-cf77... no checking for riscv64-redhat-linux-gnu-fort77... no checking for riscv64-redhat-linux-gnu-fl32... no checking for riscv64-redhat-linux-gnu-af77... no checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer can compile C++ code... yes checking how to run the C++ preprocessor... g++ -E checking whether __attribute__((visibility())) is supported... yes checking whether gcc accepts -fvisibility... yes checking whether g++ accepts -fvisibility... yes checking whether gfortran accepts -fvisibility... yes checking for riscv64-redhat-linux-gnu-gcc... no checking for riscv64-redhat-linux-gnu-objcc... no checking for riscv64-redhat-linux-gnu-objc... no checking for riscv64-redhat-linux-gnu-cc... no checking for riscv64-redhat-linux-gnu-CC... no checking for riscv64-redhat-linux-gnu-clang... no checking for gcc... gcc checking whether the compiler supports GNU Objective C... no checking whether gcc accepts -g... no checking whether g++ can compile ObjC++... no checking whether can compile ObjC++... no checking for Objective C++ compiler... no working ObjC++ compiler found checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert riscv64-redhat-linux-gnu file names to riscv64-redhat-linux-gnu format... func_convert_file_noop checking how to convert riscv64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for riscv64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for riscv64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for riscv64-redhat-linux-gnu-ar... (cached) ar checking for archiver @FILE support... @ checking for riscv64-redhat-linux-gnu-strip... no checking for strip... strip checking for riscv64-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking for gawk... gawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for riscv64-redhat-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for cos in -lm... yes checking for sin in -lm... yes checking for dlopen in -ldl... yes checking for readline/history.h... yes checking for readline/readline.h... yes checking for rl_callback_read_char in -lreadline... yes checking for history_truncate_file... yes checking for tilde_expand_word... yes checking whether rl_completion_matches exists and is declared... yes checking whether rl_resize_terminal exists and is declared... yes checking whether rl_sort_completion_matches exists and is declared... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for sys/wait.h that is POSIX.1 compatible... yes checking for dlfcn.h... (cached) yes checking for fcntl.h... yes checking for glob.h... yes checking for grp.h... yes checking for pwd.h... yes checking for sched.h... yes checking for strings.h... (cached) yes checking for sys/resource.h... yes checking for sys/select.h... yes checking for sys/socket.h... yes checking for sys/stat.h... (cached) yes checking for sys/time.h... (cached) yes checking for sys/times.h... yes checking for sys/utsname.h... yes checking for unistd.h... (cached) yes checking for utime.h... yes checking for arpa/inet.h... yes checking for elf.h... yes checking for features.h... yes checking for floatingpoint.h... no checking for langinfo.h... yes checking for netdb.h... yes checking for netinet/in.h... yes checking for sys/param.h... (cached) yes checking for stdalign.h... yes checking for errno.h... yes checking for inttypes.h... (cached) yes checking for limits.h... yes checking for locale.h... yes checking for stdarg.h... yes checking for stdbool.h... yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking for gcc options needed to detect all undeclared functions... none needed checking whether setjmp.h is POSIX.1 compatible... yes checking whether sigsetjmp is declared... yes checking whether siglongjmp is declared... yes checking for GNU C library with version >= 2... yes checking for uint64_t... yes checking for int64_t... yes checking for int_fast64_t... yes checking for pid_t... yes checking for size_t... yes checking whether SIZE_MAX is declared... yes checking for blkcnt_t... yes checking for type of socket length... socklen_t * checking for stack_t... yes checking for intptr_t... yes checking for uintptr_t... yes checking whether byte ordering is bigendian... no checking for an ANSI C-conforming const... yes checking for inline... inline checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of double... 8 checking size of size_t... 8 checking for C stack direction... down checking size of long double... 16 checking whether we can compute C Make dependencies... yes, using $(CC) -MM checking whether gcc supports -c -o FILE.lo... yes checking for gcc option to support OpenMP... -fopenmp checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/riscv64-redhat-linux/13 -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lgfortran -lm checking how to get verbose linking output from gcc... -v checking for C libraries of gcc... -L/usr/lib/gcc/riscv64-redhat-linux/13 -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lgcc_s ./configure: line 26926: cd: /lib64/lp64d/../lib64/lp64d: No such file or directory ./configure: line 26926: cd: /usr/lib64/lp64d/../lib64/lp64d: No such file or directory ./configure: line 26954: cd: /lib64/lp64d/../lib64/lp64d: No such file or directory ./configure: line 26954: cd: /usr/lib64/lp64d/../lib64/lp64d: No such file or directory checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether gfortran appends underscores to external names... yes checking whether gfortran appends extra underscores to external names... no checking whether mixed C/Fortran code can be run... yes checking whether gfortran and gcc agree on int and double... yes checking whether gfortran and gcc agree on double complex... yes checking for gfortran option to support OpenMP... -fopenmp checking whether g++ accepts -M for generating dependencies... yes checking whether we can compute ObjC Make dependencies... no checking if need -fno-optimize-sibling-calls for gfortran... yes checking for type of 'hidden' Fortran character lengths... size_t checking for xmkmf... no checking whether g++ supports C++11 features with -std=gnu++11... yes checking whether g++ supports C++14 features with -std=gnu++14... yes checking whether g++ supports C++17 features with -std=gnu++17... yes checking whether g++ supports C++20 features with -std=gnu++20... yes checking for g++ -std=gnu++14 option to support OpenMP... -fopenmp checking for option providing pthread_kill... none required checking whether POSIX threads are supported... yes checking for off_t... yes checking for working alloca.h... yes checking for alloca... yes checking whether alloca is declared... yes checking whether expm1 exists and is declared... yes checking whether hypot exists and is declared... yes checking whether log1p exists and is declared... yes checking whether log1pl exists and is declared... yes checking whether log2 exists and is declared... yes checking whether log10 exists and is declared... yes checking whether nearbyint exists and is declared... yes checking whether nearbyintl exists and is declared... yes checking whether powl exists and is declared... yes checking whether rintl exists and is declared... yes checking whether va_copy exists and is declared... yes checking for isblank... yes checking for sunmath.h... no checking for cospi in -lsunmath... no checking for atanpi... no checking for atan2pi... no checking for cospi... no checking for exp10... yes checking for pown... no checking for sinpi... no checking for tanpi... no checking for __cospi... no checking for __sinpi... no checking for __tanpi... no checking for fseeko... yes checking for ftello... yes checking for matherr... no checking whether fcntl exists and is declared... yes checking whether getgrgid exists and is declared... yes checking whether getpwnam exists and is declared... yes checking whether getpwuid exists and is declared... yes checking whether kill exists and is declared... yes checking whether sigaction exists and is declared... yes checking whether sigaltstack exists and is declared... yes checking whether sigemptyset exists and is declared... yes checking whether fdopen exists and is declared... yes checking whether popen exists and is declared... yes checking whether getline exists and is declared... yes checking whether select exists and is declared... yes checking whether setenv exists and is declared... yes checking whether unsetenv exists and is declared... yes checking whether getrlimit exists and is declared... yes checking whether setrlimit exists and is declared... yes checking whether getrusage exists and is declared... yes checking whether getpriority exists and is declared... yes checking whether chmod exists and is declared... yes checking whether mkfifo exists and is declared... yes checking whether stat exists and is declared... yes checking whether umask exists and is declared... yes checking whether gettimeofday exists and is declared... yes checking whether utimes exists and is declared... yes checking whether times exists and is declared... yes checking whether gmtime_r exists and is declared... yes checking whether localtime_r exists and is declared... yes checking whether nl_langinfo exists and is declared... yes checking whether access exists and is declared... yes checking whether chdir exists and is declared... yes checking whether execv exists and is declared... yes checking whether ftruncate exists and is declared... yes checking whether getcwd exists and is declared... yes checking whether geteuid exists and is declared... yes checking whether getuid exists and is declared... yes checking whether link exists and is declared... yes checking whether readlink exists and is declared... yes checking whether symlink exists and is declared... yes checking whether sysconf exists and is declared... yes checking whether sched_setaffinity exists and is declared... yes checking whether sched_getaffinity exists and is declared... yes checking whether utime exists and is declared... yes checking whether utimensat exists and is declared... yes checking for clock_gettime in -lrt... yes checking whether clock_gettime exists and is declared... yes checking whether timespec_get exists and is declared... yes checking for putenv... yes checking whether putenv is declared... yes checking for vasprintf... yes checking whether vasprintf is declared... yes checking for mempcpy... yes checking for realpath... yes checking whether realpath is declared... yes checking whether glob exists and is declared... yes checking for dladdr... yes checking for dlsym... yes checking whether dladdr is declared... yes checking whether dlsym is declared... yes checking whether RTLD_DEFAULT is declared... yes checking whether RTLD_NEXT is declared... yes checking for thread.h... no checking whether thr_stksegment exists and is declared... no checking for isnan... yes checking whether isfinite is declared... yes checking whether isnan is declared... yes checking whether you have IEEE 754 floating-point arithmetic... yes checking whether putenv("FOO") can unset an environment variable... yes checking whether putenv("FOO=") can unset an environment variable... no checking for nl_langinfo and CODESET... yes checking for mkdtemp... yes checking for strdup... yes checking for strncasecmp... yes checking whether mkdtemp is declared... yes checking whether strdup is declared... yes checking whether strncasecmp is declared... yes checking for library containing connect... none required checking for library containing gethostbyname... none required checking for library containing xdr_string... no checking for working calloc... yes checking for working isfinite... yes checking for working log1p... yes checking whether ftell works correctly on files opened for append... yes checking for working sigaction... yes checking whether mktime sets errno... no checking whether mktime works correctly outside 1902-2037... yes checking for complex.h... yes checking for double complex... yes checking whether C99 double complex is supported... yes checking whether cabs exists and is declared... yes checking whether carg exists and is declared... yes checking whether cexp exists and is declared... yes checking whether clog exists and is declared... yes checking whether csqrt exists and is declared... yes checking whether cpow exists and is declared... yes checking whether ccos exists and is declared... yes checking whether csin exists and is declared... yes checking whether ctan exists and is declared... yes checking whether cacos exists and is declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for working ctanh... yes checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes checking for dgemm_ in -lflexiblas... yes checking whether double complex BLAS can be used... yes checking whether the BLAS is complete... yes checking for dpstrf_... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes checking whether iconv accepts "CP1252"... yes checking for iconvlist... no checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for wchar.h... (cached) yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether wctype exists and is declared... yes checking whether iswctype exists and is declared... yes checking whether wcwidth exists and is declared... yes checking whether wcswidth exists and is declared... yes checking for wctrans_t... yes checking for mbstate_t... yes checking for ICU... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for X11/Intrinsic.h... yes checking for XtToolkitInitialize in -lXt... yes using X11 ... yes checking for KeySym... yes checking for X11/Xmu/Atoms.h... yes checking for XmuInternAtom in -lXmu... yes checking whether pkg-config knows about cairo and pango... yes checking whether cairo including pango is >= 1.2 and works... yes checking for /usr/lib64/tclConfig.sh... /usr/lib64/tclConfig.sh checking for /usr/lib64/tkConfig.sh... /usr/lib64/tkConfig.sh checking for tcl.h... yes checking for tk.h... yes checking whether compiling/linking Tcl/Tk code works... yes checking for BSD networking... yes checking for rpc/types.h... no checking for tirpc/rpc/types.h... no checking for XDR support... no checking for inflateInit2_ in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.2.5... yes checking whether zlib support suffices... yes checking for BZ2_bzlibVersion in -lbz2... yes checking for bzlib.h... yes checking if bzip2 version >= 1.0.6... yes checking whether bzip2 support suffices... yes checking for lzma_version_number in -llzma... yes checking for lzma.h... yes checking if lzma version >= 5.0.3... yes checking for pcre2.h... yes checking for pcre2_compile_8 in -lpcre2-8... yes checking if PCRE2 has Unicode support... yes checking whether PCRE support suffices... yes checking for tre_regncompb in -ltre... yes checking for tre/tre.h... yes checking for curl-config... /usr/bin/curl-config checking libcurl version ... 7.87.0 checking for curl/curl.h... yes checking if libcurl is version 7 and >= 7.28.0... yes checking if libcurl supports https... yes checking if pkg-config knows about libjpeg... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking if pkg-config knows about libpng... yes checking if libpng version >= 1.2.7... yes checking for png_create_write_struct in -lpng... yes checking if pkg-config knows about libtiff... yes checking for tiffio.h... yes checking for TIFFOpen in -ltiff... yes checking whether leap seconds are treated according to POSIX... yes checking for inline... inline checking for struct stat.st_atim.tv_nsec... yes checking whether struct stat.st_atim is of type struct timespec... yes checking for setitimer... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking whether KERN_USRSTACK sysctl is supported... no checking for visible __lib_stack_end... yes checking for paperconf... /usr/bin/paperconf checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for gfortran option to support OpenMP... (cached) -fopenmp checking for recommended packages... yes checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... /usr/bin/mkdir -p checking whether we are using the GNU C Library 2 or newer... yes checking for riscv64-redhat-linux-gnu-ranlib... ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... no checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for shared library run path origin... done ./configure: line 50790: cd: /lib64/lp64d/../lib64/lp64d/: No such file or directory ./configure: line 50790: cd: /usr/lib64/lp64d/../lib64/lp64d/: No such file or directory checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... yes checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) yes checking for munmap... yes checking for stpcpy... yes checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... yes checking for argz_stringify... yes checking for argz_next... yes checking for __fsetlocking... yes checking whether feof_unlocked is declared... yes checking whether fgets_unlocked is declared... yes checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... yes checking for bison... no checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... yes checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) no checking for CFLocaleCopyCurrent... (cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands configure: WARNING: unrecognized options: --disable-dependency-tracking R is now configured for riscv64-redhat-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer Fortran fixed-form compiler: gfortran -fno-optimize-sibling-calls -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules Default C++ compiler: g++ -std=gnu++14 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++11 compiler: g++ -std=gnu++11 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++14 compiler: g++ -std=gnu++14 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++17 compiler: g++ -std=gnu++17 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++20 compiler: g++ -std=gnu++20 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer Fortran free-form compiler: gfortran -fno-optimize-sibling-calls -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(FlexiBlas), LAPACK(generic), tre, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, static HTML Capabilities skipped: Options not enabled: shared BLAS Recommended packages: yes + cat CONFIGURE.log + grep -A30 'R is now' - + make V=1 make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/etc' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/share' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/scripts' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/include' mkdir -p -- ../../include make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/xdr' making xdr.d from xdr.c making xdr_float.d from xdr_float.c making xdr_mem.d from xdr_mem.c making xdr_stdio.d from xdr_stdio.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/xdr' gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c xdr.c -o xdr.o gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c xdr_float.c -o xdr_float.o gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c xdr_mem.c -o xdr_mem.o gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c xdr_stdio.c -o xdr_stdio.o ar -cr libxdr.a xdr.o xdr_float.o xdr_mem.o xdr_stdio.o ranlib libxdr.a make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/xdr' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/xdr' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/appl' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c uncmin.c -o uncmin.o gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dchdc.f -o dchdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpbfa.f -o dpbfa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpbsl.f -o dpbsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpoco.f -o dpoco.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpodi.f -o dpodi.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpofa.f -o dpofa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dposl.f -o dposl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrdc.f -o dqrdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrdc2.f -o dqrdc2.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrls.f -o dqrls.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrsl.f -o dqrsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrutl.f -o dqrutl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dsvdc.f -o dsvdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dtrco.f -o dtrco.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dtrsl.f -o dtrsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/appl' #@make install-Linpack make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/nmath' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/nmath' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/unix' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/builddir/build/BUILD/R-4.2.2"' \ -o Rscript ./Rscript.c make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/unix' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c CommandLineArgs.c -o CommandLineArgs.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rdynload.c -o Rdynload.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Renviron.c -o Renviron.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c RNG.c -o RNG.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agrep.c -o agrep.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c altclasses.c -o altclasses.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c altrep.c -o altrep.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c apply.c -o apply.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c arithmetic.c -o arithmetic.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c array.c -o array.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c attrib.c -o attrib.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bind.c -o bind.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c builtin.c -o builtin.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c character.c -o character.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clippath.c -o clippath.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coerce.c -o coerce.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c colors.c -o colors.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c complex.c -o complex.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c connections.c -o connections.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c context.c -o context.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cum.c -o cum.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcf.c -o dcf.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c datetime.c -o datetime.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c debug.c -o debug.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c deparse.c -o deparse.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devices.c -o devices.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dotcode.c -o dotcode.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dounzip.c -o dounzip.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dstruct.c -o dstruct.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c duplicate.c -o duplicate.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c edit.c -o edit.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c engine.c -o engine.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c envir.c -o envir.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c errors.c -o errors.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c eval.c -o eval.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c format.c -o format.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gevents.c -o gevents.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gram.c -o gram.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gram-ex.c -o gram-ex.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c graphics.c -o graphics.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c grep.c -o grep.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c identical.c -o identical.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c inlined.c -o inlined.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c inspect.c -o inspect.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c internet.c -o internet.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c iosupport.c -o iosupport.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lapack.c -o lapack.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c list.c -o list.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c localecharset.c -o localecharset.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c logic.c -o logic.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c main.c -o main.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mapply.c -o mapply.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mask.c -o mask.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c match.c -o match.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c memory.c -o memory.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c names.c -o names.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c objects.c -o objects.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c options.c -o options.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c paste.c -o paste.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c patterns.c -o patterns.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c platform.c -o platform.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot.c -o plot.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot3d.c -o plot3d.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plotmath.c -o plotmath.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c print.c -o print.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c printarray.c -o printarray.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c printvector.c -o printvector.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c printutils.c -o printutils.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qsort.c -o qsort.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c radixsort.c -o radixsort.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c random.c -o random.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c raw.c -o raw.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c registration.c -o registration.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c relop.c -o relop.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlocale.c -o rlocale.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c saveload.c -o saveload.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c scan.c -o scan.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c seq.c -o seq.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c serialize.c -o serialize.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sort.c -o sort.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c source.c -o source.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c split.c -o split.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sprintf.c -o sprintf.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c startup.c -o startup.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subassign.c -o subassign.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subscript.c -o subscript.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subset.c -o subset.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c summary.c -o summary.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sysutils.c -o sysutils.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c times.c -o times.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c unique.c -o unique.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c util.c -o util.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c version.c -o version.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_alab_her.c -o g_alab_her.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_cntrlify.c -o g_cntrlify.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_fontdb.c -o g_fontdb.o gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_her_glyph.c -o g_her_glyph.o gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c xxxpr.f -o xxxpr.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/xdr/libxdr.a -lflexiblas -L -L -lgfortran -lm -lreadline -ltre -lpcre2-8 -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' mkdir -p -- /builddir/build/BUILD/R-4.2.2/bin/exec mkdir -p -- /builddir/build/BUILD/R-4.2.2/lib make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' gcc -I../../src/extra/xdr -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R.bin Rmain.o -lR make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c libcurl.c -o libcurl.o libcurl.c: In function 'in_do_curlDownload': libcurl.c:637:13: warning: 'CURLOPT_PROGRESSFUNCTION' is deprecated: since 7.32.0. Use CURLOPT_XFERINFOFUNCTION [-Wdeprecated-declarations] 637 | curl_easy_setopt(hnd[i], CURLOPT_PROGRESSFUNCTION, progress); | ^~~~~~~~~~~~~~~~ In file included from libcurl.c:38: /usr/include/curl/curl.h:1295:3: note: declared here 1295 | CURLOPTDEPRECATED(CURLOPT_PROGRESSFUNCTION, CURLOPTTYPE_FUNCTIONPOINT, 56, | ^~~~~~~~~~~~~~~~~ libcurl.c:693:9: warning: 'CURLINFO_SIZE_DOWNLOAD' is deprecated: since 7.55.0. Use CURLINFO_SIZE_DOWNLOAD_T [-Wdeprecated-declarations] 693 | curl_easy_getinfo(hnd[0], CURLINFO_SIZE_DOWNLOAD, &dl); | ^~~~~~~~~~~~~~~~~ /usr/include/curl/curl.h:2836:3: note: declared here 2836 | CURLINFO_SIZE_DOWNLOAD | ^~~~~~~~~~~~~~~~~~~~~~ libcurl.c:702:9: warning: 'CURLINFO_CONTENT_LENGTH_DOWNLOAD' is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations] 702 | curl_easy_getinfo(hnd[0], CURLINFO_CONTENT_LENGTH_DOWNLOAD, &cl); | ^~~~~~~~~~~~~~~~~ /usr/include/curl/curl.h:2853:3: note: declared here 2853 | CURLINFO_CONTENT_LENGTH_DOWNLOAD | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libcurl.c:714:13: warning: 'CURLINFO_SIZE_DOWNLOAD' is deprecated: since 7.55.0. Use CURLINFO_SIZE_DOWNLOAD_T [-Wdeprecated-declarations] 714 | curl_easy_getinfo(hnd[i], CURLINFO_SIZE_DOWNLOAD, &dl); | ^~~~~~~~~~~~~~~~~ /usr/include/curl/curl.h:2836:3: note: declared here 2836 | CURLINFO_SIZE_DOWNLOAD | ^~~~~~~~~~~~~~~~~~~~~~ gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' mkdir -p -- /builddir/build/BUILD/R-4.2.2/modules make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' making Lapack.d from Lapack.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Lapack.c -o Lapack.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lapack.so Lapack.o -lR -lflexiblas -lflexiblas -L -L -lgfortran -lm make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library' mkdir -p -- ../../library make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/profile' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/translations' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/translations' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/translations' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/base' building package 'base' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/base' mkdir -p -- ../../../library/base/demo make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' mkdir -p -- ../../../library/tools/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gramRd.c -o gramRd.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pdscan.c -o pdscan.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/compiler' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/compiler' byte-compiling package 'compiler' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/compiler' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/compiler' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/base' byte-compiling package 'base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' byte-compiling package 'tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' byte-compiling package 'utils' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/utils' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/icc make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[7]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[8]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src/cairo' make[9]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo -lpng16 -lz -L"../../../../../lib" -lR -lm make[9]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src/cairo' make[8]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src/cairo' make[7]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src/cairo' make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' byte-compiling package 'grDevices' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grDevices' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' byte-compiling package 'graphics' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/graphics' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' mkdir -p -- ../../../library/stats/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c influence.c -o influence.o gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c bsplvd.f -o bsplvd.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c bvalue.f -o bvalue.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c bvalus.f -o bvalus.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c loessf.f -o loessf.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c ppr.f -o ppr.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c qsbart.f -o qsbart.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sgram.f -o sgram.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sinerp.f -o sinerp.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sslvrg.f -o sslvrg.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c stxwx.f -o stxwx.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c hclust.f -o hclust.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c kmns.f -o kmns.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c eureka.f -o eureka.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c stl.f -o stl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c portsrc.f -o portsrc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran portsrc.f:6574:44: 6574 | INTEGER DEG,HEAD,IC,IP,IPL,IPU,IR,JCOL,JP,JPL,JPU,L,MAXINC, | ^ Warning: 'jcol' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5658:18: 5658 | IF (ALPHAK .GE. TWOPSI*PSIFAC) GO TO 310 | ^ Warning: 'psifac' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5378:62: 5378 | 1 LK, OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, | ^ note: 'psifac' was declared here portsrc.f:5521:51: 5521 | IF (ALPHAK .LE. ZERO .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ Warning: 'alphak' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5377:37: 5377 | DOUBLE PRECISION A, ADI, ALPHAK, B, DFACSQ, DST, DTOL, D1, D2, | ^ note: 'alphak' was declared here portsrc.f:10324:72: 10324 | LK = DMAX1(LK, PHI*W(PHIPIN)) | ^ Warning: 'phi' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10077:34: 10077 | 1 OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, RADSQ, | ^ note: 'phi' was declared here portsrc.f:10466:10: 10466 | IF (KA .GE. KAMIN) GO TO 340 | ^ Warning: 'kamin' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10075:32: 10075 | 1 J, K, KALIM, KAMIN, K1, LK0, PHIPIN, Q, Q0, UK0, X | ^ note: 'kamin' was declared here portsrc.f:10329:55: 10329 | IF (-V(DST0) .GE. ALPHAK .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ Warning: 'alphak' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10076:29: 10076 | DOUBLE PRECISION ALPHAK, AKI, AKK, DELTA, DST, EPS, GTSTA, LK, | ^ note: 'alphak' was declared here portsrc.f:10412:72: 10412 | V(PREDUC) = HALF * (DABS(ALPHAK)*DST*DST + GTSTA) | ^ Warning: 'gtsta' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10076:63: 10076 | DOUBLE PRECISION ALPHAK, AKI, AKK, DELTA, DST, EPS, GTSTA, LK, | ^ note: 'gtsta' was declared here portsrc.f:12246:72: 12246 | V(DST0) = DNWTST | ^ Warning: 'dnwtst' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:12105:29: 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ note: 'dnwtst' was declared here portsrc.f:12243:72: 12243 | V(NREDUC) = NRED | ^ Warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:12105:58: 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ note: 'nred' was declared here portsrc.f:2514:72: 2514 | 60 V(DST0) = DS0 | ^ Warning: 'ds0' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:2457:26: 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: 'ds0' was declared here portsrc.f:2515:72: 2515 | V(NREDUC) = NRED | ^ Warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:2457:32: 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: 'nred' was declared here portsrc.f:8173:72: 8173 | 90 V(DST0) = DS0 | ^ Warning: 'ds0' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8086:26: 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: 'ds0' was declared here portsrc.f:8174:72: 8174 | V(NREDUC) = NRED | ^ Warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8086:32: 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: 'nred' was declared here portsrc.f:8652:72: 8652 | 210 IV(FDH) = HES | ^ Warning: 'hes' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8450:25: 8450 | INTEGER GSAVE1, HES, HMI, HPI, HPM, I, K, KIND, L, M, MM1, MM1O2, | ^ note: 'hes' was declared here portsrc.f:3587:10: 3587 | IF (LIV .LT. MIV2) GO TO 300 | ^ Warning: 'miv2' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:3520:54: 3520 | INTEGER ALG1, I, II, IV1, J, K, L, M, MIV1, MIV2, NDFALT, PARSV1, | ^ note: 'miv2' was declared here portsrc.f:12079:72: 12079 | 270 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ Warning: 'g1' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:11822:16: 11822 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, L, LH, NN, QTR1, | ^ note: 'g1' was declared here portsrc.f:458:72: 458 | 300 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ Warning: 'g1' may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:157:16: 157 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, K, L, LH, NN, QTR1, | ^ note: 'g1' was declared here gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c lminfl.f -o lminfl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -lflexiblas -lflexiblas -L -L -lgfortran -lm -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' byte-compiling package 'stats' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/datasets' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/datasets' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' mkdir -p -- ../../../library/methods/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/methods/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/methods/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/methods' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' mkdir -p -- ../../../library/grid/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c unit.c -o unit.o unit.c: In function 'summaryUnits': unit.c:1969:37: warning: 'first_type' may be used uninitialized [-Wmaybe-uninitialized] 1969 | (j == 0 || | ~~~~~~~~^~ 1970 | (current_type == first_type && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1971 | R_compute_identical(uData(unit_temp), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1972 | first_data, 15))); | ~~~~~~~~~~~~~~~~~ unit.c:1957:21: note: 'first_type' was declared here 1957 | int first_type, current_type; | ^~~~~~~~~~ unit.c:1971:31: warning: 'first_data' may be used uninitialized [-Wmaybe-uninitialized] 1971 | R_compute_identical(uData(unit_temp), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1972 | first_data, 15))); | ~~~~~~~~~~~~~~~ unit.c:1959:22: note: 'first_data' was declared here 1959 | SEXP first_data; | ^~~~~~~~~~ gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grid/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grid/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' byte-compiling package 'grid' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/grid' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' mkdir -p -- ../../../library/splines/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o splines.so splines.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/splines/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/splines/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' byte-compiling package 'splines' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/splines' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats4' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/stats4' byte-compiling package 'stats4' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats4' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/stats4' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -lX11 -lm -L../../../../lib -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk/src' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk' byte-compiling package 'tcltk' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/tcltk' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' make[5]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' byte-compiling package 'parallel' make[4]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/parallel' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/base' installing parsed NAMESPACE files make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/tests' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tests' you should 'make docs' now ... make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc' creating doc/NEWS creating doc/NEWS.pdf make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/html' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[1]: 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'/builddir/build/BUILD/R-4.2.2/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library' building all R object docs converting help for package 'base' Arithmetic html AsIs html Bessel html CallExternal html Colon html Comparison html Constants html Control html Cstack_info html DateTimeClasses html Dates html Defunct html Deprecated html Encoding html EnvVar html Extract html Extract.data.frame html Extract.factor html Extremes html Foreign-internal html Foreign html Hyperbolic html ISOdatetime html Internal html InternalMethods html La_library html La_version html Last.value html Log html Logic html LongVectors html MathFun html Memory-limits html Memory html NA html NULL html NumericConstants html Ops.Date html Paren html Platform html Primitive html Quotes html Random-user html Random html RdUtils html Recall html Reserved html Rhome html Round html S3method html Special html StackOverflows html Startup html Syntax html Sys.getenv html Sys.getpid html Sys.glob html Sys.info html Sys.localeconv html Sys.readlink html Sys.setFileTime html Sys.setenv html Sys.sleep html Sys.time html Sys.which html Trig html UTF8filepaths html UseMethod html Vectorize html Version html abbreviate html agrep html all html all.equal html allnames html any html aperm html append html apply html args html array html as.Date html as.POSIXlt html as.data.frame html as.environment html as.function html asplit html assign html assignOps html attach html attr html attributes html autoload html backsolve html base-defunct html REDIRECT:topic Previous alias or file overwritten by alias: ../../library/base/help/Version.html REDIRECT:topic Previous alias or file overwritten by alias: ../../library/base/help/Platform.html base-deprecated html base-internal html base-package html basename html bincode html bindenv html bitwise html body html bquote html browser html browserText html builtins html by html c html call html callCC html capabilities html cat html cbind html char.expand html character html charmatch html chartr html chkDots html chol html chol2inv html class html col html colSums html colnames html commandArgs html comment html complex html conditions html conflicts html connections html contributors html copyright html crossprod html cumsum html curlGetHeaders html cut.POSIXt html cut html data.class html data.frame html data.matrix html dataframeHelpers html date html dcf html debug html delayedAssign html deparse html deparseOpts html det html detach html dev html diag html diff html difftime html dim html dimnames html do.call html dontCheck html dots html double html dput html drop html droplevels html dump html duplicated html dynload html eapply html eigen html encodeString html environment html eval html exists html expand.grid html expression html extSoftVersion html factor html file.access html file.choose html file.info html file.path html file.show html files html files2 html find.package html findInterval html force html forceAndCall html formals html format html format.info html format.pval html formatDL html formatc html function html funprog html gc html gc.time html gctorture html get html getCallingDLL html getDLLRegisteredRoutines html getLoadedDLLs html getNativeSymbolInfo html gettext html getwd html gl html grep html grepRaw html groupGeneric html grouping html gzcon html hexmode html iconv html icuSetCollate html identical html identity html ifelse html integer html interaction html interactive html invisible html is.finite html is.function html is.language html is.object html is.recursive html is.single html is.unsorted html isR html isS4 html isSymmetric html jitter html kappa html kronecker html l10n_info html labels html lapply html lazyload html length html lengths html levels html libPaths html libcurlVersion html library html library.dynam html license html list html list.files html list2DF html list2env html load html locales html logical html lower.tri html ls html make.names html 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readRenviron html readline html reg.finalizer html regex html regmatches html rep html replace html rev html rle html rm html round.POSIXt html row html row.names html rowsum html sQuote html sample html save html scale html scan html search html seek html seq.Date html seq.POSIXt html seq html sequence html serialize html setTimeLimit html sets html shQuote html showConnections html sign html sink html slice.index html slotOp html socketSelect html solve html sort html source html split html sprintf html srcfile html standardGeneric html startsWith html stop html stopifnot html strptime html strrep html strsplit html strtoi html strtrim html structure html strwrap html subset html substitute html substr html sum html summary html svd html sweep html switch html sys.parent html sys.source html system html system.file html system.time html system2 html t html table html tabulate html tapply html taskCallback html taskCallbackManager html taskCallbackNames html tempfile html textconnections html tilde html timezones html toString html trace html traceback html tracemem html transform html trimws html try html typeof html unique html unlink html unlist html unname html userhooks html utf8Conversion html validUTF8 html vector html warning html warnings html weekday.POSIXt html which html which.min html with html withVisible html write html writeLines html xtfrm html zMachine html zScript html zapsmall html zpackages html zutils html Signals html converting help for package 'tools' CRANtools html HTMLheader html HTMLlinks html QC html Rcmd html Rd2HTML html Rd2txt_options html RdTextFilter html Rdiff html Rdindex html Rdutils html SweaveTeXFilter html add_datalist html assertCondition html bibstyle html buildVignette html buildVignettes html charsets html checkFF html checkMD5sums html checkPoFiles html checkRd html checkRdaFiles html checkTnF html checkVignettes html check_packages_in_dir html codoc html compactPDF html delimMatch html dependsOnPkgs html encoded html fileutils html find_gs_cmd html getVignetteInfo html loadRdMacros html makeLazyLoading html make_translations_pkg html makevars html md5sum html package_dependencies html package_native_routine_registration_skeleton html parseLatex html parse_Rd html print.via.format html pskill html psnice html read.00Index html showNonASCII html startDynamicHelp html testInstalledPackage html texi2dvi html toHTML html toRd html toTitleCase html tools-defunct html tools-deprecated html tools-package html undoc html updatePACKAGES html update_pkg_po html userdir html vignetteEngine html vignetteInfo html writePACKAGES html xgettext html converting help for package 'utils' BATCH html COMPILE html DLL.version html INSTALL html LINK html PkgUtils html Question html REMOVE html RHOME html RShowDoc html RSiteSearch html Rconsole html Rprof html Rprofmem html Rscript html Rtangle html RweaveLatex html SHLIB html Sweave html SweaveSyntConv html SweaveUtils html URLencode html View html adist html alarm html apropos html aregexec html arrangeWindows html askYesNo html aspell-utils html aspell html available.packages html bibentry html browseEnv html browseURL html browseVignettes html bug.report html capture.output html changedFiles html charClass html choose.dir html choose.files html chooseBioCmirror html chooseCRANmirror html citEntry html citation html cite html clipboard html close.socket html combn html compareVersion html contrib.url html count.fields html create.post html data html dataentry html debugcall html debugger html demo html download.file html download.packages html edit html edit.data.frame html example html file.edit html filetest html findCRANmirror html findLineNum html fix html flush.console html format html getAnywhere html getFromNamespace html getParseData html getS3method html getWindowsHandle html getWindowsHandles html glob2rx html globalVariables html hasName html hashtab html head html help html help.request html help.search html help.start html hsearch-utils html install.packages html installed.packages html isS3method html isS3stdGen html localeToCharset html ls_str html maintainer html make.packages.html html make.socket html memory.size html menu html methods html mirrorAdmin html modifyList html news html nsl html object.size html package.skeleton html packageDescription html packageName html packageStatus html page html person html process.events html prompt html promptData html promptPackage html rcompgen html read.DIF html read.fortran html read.fwf html read.socket html read.table html readRegistry html recover html relist html remove.packages html removeSource html roman html rtags html savehistory html select.list html sessionInfo html setRepositories html setWindowTitle html shortPathName html sourceutils html stack html str html strcapture html summaryRprof html tar html toLatex html txtProgressBar html type.convert html untar html unzip html update.packages html url.show html utils-defunct html utils-deprecated html utils-package html vignette html warnErrList html winDialog html winMenus html winProgressBar html winextras html write.table html zip html converting help for package 'grDevices' Devices html Hershey html Japanese html Type1Font html adjustcolor html as.graphicsAnnot html as.raster html axisTicks html boxplot.stats html bringToTop html cairo html cairoSymbolFont html check.options html chull html cm html col2rgb html colorRamp html colors html contourLines html convertColor html densCols html dev html dev.capabilities html dev.capture html dev.flush html dev.interactive html dev.size html dev2 html dev2bitmap html devAskNewPage html embedFonts html extendrange html getGraphicsEvent html grDevices-package html grSoftVersion html gray html gray.colors html hcl html hsv html make.rgb html msgWindow html n2mfrow html nclass html palette html palettes html pdf html pdf.options html pictex html plotmath html postscript html postscriptFonts html pretty.Date html ps.options html quartz html quartzFonts html recordGraphics html recordplot html rgb html rgb2hsv html trans3d html windows html windows.options html windowsFonts html x11 html x11Fonts html xfig html xy.coords html xyTable html xyz.coords html png html savePlot html converting help for package 'graphics' abline html arrows html assocplot html axTicks html axis.POSIXct html axis html barplot html box html boxplot html boxplot.matrix html bxp html cdplot html clip html contour html convertXY html coplot html curve html dotchart html filled.contour html fourfoldplot html frame html graphics-defunct html graphics-package html grid html hist.POSIXt html hist html identify html image html layout html legend html lines html locator html matplot html mosaicplot html mtext html pairs html panel.smooth html par html persp html pie html plot.dataframe html plot.default html plot.design html plot.factor html plot.formula html plot.raster html plot.table html plot.window html plot.xy html plothistogram html points html polygon html polypath html rasterImage html rect html rug html screen html segments html smoothScatter html spineplot html stars html stem html stripchart html strwidth html sunflowerplot html symbols html text html title html units html xspline html zAxis html converting help for package 'stats' AIC html ARMAacf html ARMAtoMA html Beta html Binomial html Cauchy html Chisquare html Distributions html Exponential html Fdist html GammaDist html Geometric html HoltWinters html Hypergeometric html IQR html KalmanLike html Logistic html Lognormal html Multinom html NLSstAsymptotic html NLSstClosestX html NLSstLfAsymptote html NLSstRtAsymptote html NegBinomial html Normal html Pair html Poisson html SSD html SSasymp html SSasympOff html SSasympOrig html SSbiexp html SSfol html SSfpl html SSgompertz html SSlogis html SSmicmen html SSweibull html SignRank html Smirnov html StructTS html TDist html Tukey html TukeyHSD html Uniform html Weibull html Wilcoxon html acf html acf2AR html add1 html addmargins html aggregate html alias html anova html anova.glm html anova.lm html anova.mlm html ansari.test html aov html approxfun html ar html ar.ols html arima html arima.sim html arima0 html as.hclust html asOneSidedFormula html ave html bandwidth html bartlett.test html binom.test html biplot html biplot.princomp html birthday html box.test html cancor html case.names html checkMFClasses html chisq.test html cmdscale html coef html complete.cases html confint html constrOptim html contrast html contrasts html convolve html cophenetic html cor html cor.test html cov.wt html cpgram html cutree html decompose html delete.response html dendrapply html dendrogram html density html deriv html deviance html df.residual html diffinv html dist html dummy.coef html ecdf html eff.aovlist html effects html embed html expand.model.frame html extractAIC html factanal html factor.scope html family html fft html filter html fisher.test html fitted.values html fivenum html fligner.test html formula html formula.nls html friedman.test html ftable html ftable.formula html getInitial html glm html glm.control html glm.summaries html hclust html heatmap html identify.hclust html influence.measures html integrate html interaction.plot html is.empty html isoreg html kernapply html kernel html kmeans html kruskal.test html ks.test html ksmooth html lag html lag.plot html line html listof html lm html lm.influence html lm.summaries html lmfit html loadings html loess html loess.control html logLik html loglin html lowess html ls.diag html ls.print html lsfit html mad html mahalanobis html make.link html makepredictcall html manova html mantelhaen.test html mauchly.test html mcnemar.test html median html medpolish html model.extract html model.frame html model.matrix html model.tables html monthplot html mood.test html na.action html na.contiguous html na.fail html nafns html naprint html nextn html nlm html nlminb html nls html nls.control html nobs html numericDeriv html offset html oneway.test html optim html optimize html order.dendrogram html p.adjust html pairwise.prop.test html pairwise.t.test html pairwise.table html pairwise.wilcox.test html plot.HoltWinters html plot.acf html plot.density html plot.isoreg html plot.lm html plot.ppr html plot.profile.nls html plot.spec html plot.stepfun html plot.ts html poisson.test html poly html power html power.anova.test html power.prop.test html power.t.test html pp.test html ppoints html ppr html prcomp html predict.HoltWinters html predict html predict.arima html predict.glm html predict.lm html predict.loess html predict.nls html predict.smooth.spline html preplot html princomp html print.power.htest html print.ts html printCoefmat html profile html profile.nls html proj html prop.test html prop.trend.test html qqnorm html quade.test html quantile html r2dtable html rWishart html read.ftable html rect.hclust html relevel html reorder.dendrogram html reorder.factor html replications html reshape html residuals html runmed html scatter.smooth html screeplot html sd html se.contrast html selfStart html setNames html shapiro.test html sigma html simulate html smooth html smooth.spline html smoothEnds html sortedXyData html spec.ar html spec.pgram html spec.taper html spectrum html splinefun html start html stat.anova html stats-defunct html stats-deprecated html stats-package html step html stepfun html stl html stlmethods html summary.aov html summary.glm html summary.lm html summary.manova html summary.nls html summary.princomp html supsmu html symnum html t.test html termplot html terms html terms.formula html terms.object html time html toeplitz html ts-methods html ts html ts.plot html ts.union html tsSmooth html tsdiag html tsp html uniroot html update html update.formula html var.test html varimax html vcov html weighted.mean html weighted.residuals html weights html wilcox.test html window html xtabs html zC html converting help for package 'datasets' AirPassengers html BJsales html BOD html ChickWeight html DNase html EuStockMarkets html Formaldehyde html HairEyeColor html Harman23.cor html Harman74.cor html Indometh html InsectSprays html JohnsonJohnson html LakeHuron html LifeCycleSavings html Loblolly html Nile html Orange html OrchardSprays html PlantGrowth html Puromycin html Theoph html Titanic html ToothGrowth html UCBAdmissions html UKDriverDeaths html UKLungDeaths html UKgas html USAccDeaths html USArrests html USJudgeRatings html USPersonalExpenditure html VADeaths html WWWusage html WorldPhones html ability.cov html airmiles html airquality html anscombe html attenu html attitude html austres html beavers html cars html chickwts html co2 html crimtab html datasets-package html discoveries html esoph html euro html eurodist html faithful html freeny html infert html iris html islands html lh html longley html lynx html morley html mtcars html nhtemp html nottem html npk html occupationalStatus html precip html presidents html pressure html quakes html randu html rivers html rock html sleep html stackloss html state html sunspot.month html sunspot.year html sunspots html swiss html treering html trees html uspop html volcano html warpbreaks html women html zCO2 html converting help for package 'methods' BasicClasses html Classes html Classes_Details html Documentation html EmptyMethodsList-class html EnvironmentClass html GenericFunctions html Introduction html LanguageClasses html LinearMethodsList-class html MethodDefinition-class html MethodSupport html MethodWithNext-class html Methods html MethodsList-class html MethodsList html Methods_Details html Methods_for_Nongenerics html Methods_for_S3 html NextMethod html ObjectsWithPackage-class html RClassUtils html RMethodUtils html S3Part html S4groupGeneric html SClassExtension-class html StructureClasses html TraceClasses html as html callGeneric html canCoerce html cbind2 html className html classRepresentation-class html classesToAM html dotsMethods html evalSource html findClass html findMethods html fixPrevious html genericFunction-class html getClass html getMethod html getPackageName html hasArg html implicitGeneric html inheritedSlotNames html initialize-methods html is html isSealedMethod html languageEl html localRefClass html method.skeleton html methodUtilities html methods-defunct html methods-deprecated html methods-package html new html nonStructure-class html promptClass html promptMethods html refClass html removeMethod html representation html selectSuperClasses html setAs html setClass html setClassUnion html setGeneric html setGroupGeneric html setIs html setLoadActions html setMethod html setOldClass html setSClass html show html showMethods html signature-class html slot html stdRefClass html substituteDirect html testInheritedMethods html validObject html zBasicFunsList html converting help for package 'grid' Grid html absolute.size html arrow html as.mask html calcStringMetric html current.viewport html dataViewport html depth html deviceLoc html drawDetails html editDetails html editViewport html explode html gEdit html gPath html getNames html gpar html grid-defunct html grid-internal html grid-package html grid.DLapply html grid.add html grid.bezier html grid.cap html grid.circle html grid.clip html grid.convert html grid.copy html grid.curve html grid.delay html grid.display.list html grid.draw html grid.edit html grid.force html grid.frame html grid.function html grid.get html grid.grab html grid.grep html grid.grill html grid.grob html grid.group html grid.layout html grid.lines html grid.locator html grid.ls html grid.move.to html grid.newpage html grid.null html grid.pack html grid.path html grid.place html grid.plot.and.legend html grid.points html grid.polygon html grid.pretty html grid.raster html grid.record html grid.rect html grid.refresh html grid.remove html grid.reorder html grid.roundrect html grid.segments html grid.set html grid.show.layout html grid.show.viewport html grid.stroke html grid.text html grid.xaxis html grid.xspline html grid.yaxis html gridCoords html grobCoords html grobName html grobWidth html grobX html legendGrob html makeContent html patterns html plotViewport html resolveRasterSize html showGrob html showViewport html stringWidth html unit html unit.c html unit.length html unit.pmin html unit.rep html unitType html valid.just html validDetails html viewport html viewportTransform html viewports html vpPath html widthDetails html xDetails html xsplinePoints html converting help for package 'splines' asVector html backSpline html bs html interpSpline html ns html periodicSpline html polySpline html predict.bSpline html predict.bs html splineDesign html splineKnots html splineOrder html splines-package html xyVector html converting help for package 'stats4' coef-methods html confint-methods html logLik-methods html mle-class html mle html plot-methods html profile-methods html profile.mle-class html show-methods html stats4-package html summary-methods html summary.mle-class html update-methods html vcov-methods html converting help for package 'tcltk' TclInterface html TkCommands html TkWidgetcmds html TkWidgets html tclServiceMode html tcltk-defunct html tcltk-package html tkProgressBar html tkStartGUI html tk_choose.dir html tk_choose.files html tk_messageBox html tk_select.list html tkpager html converting help for package 'compiler' compile html converting help for package 'parallel' RngStream html clusterApply html detectCores html makeCluster html parallel-package html splitIndices html children html mcaffinity html mcfork html mclapply html mcparallel html pvec html make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/Recommended' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library/Recommended' begin installing recommended package MASS * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpnAsW86/R.INSTALL82694fef7d82/MASS/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c MASS.c -o MASS.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lqs.c -o lqs.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o MASS.so MASS.o lqs.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpnAsW86/R.INSTALL82694fef7d82/MASS/src' installing to /builddir/build/BUILD/R-4.2.2/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MASS' finding HTML links ... done Aids2 html Animals html Boston html Cars93 html Cushings html DDT html GAGurine html Insurance html MASS-internal html Melanoma html Null html OME html Pima.tr html Rabbit html Rubber html SP500 html Sitka html Sitka89 html Skye html Traffic html UScereal html UScrime html VA html abbey html accdeaths html addterm html anorexia html anova.negbin html area html bacteria html bandwidth.nrd html bcv html beav1 html beav2 html biopsy html birthwt html boxcox html cabbages html caith html cats html cement html chem html con2tr html confint html contr.sdif html coop html corresp html cov.rob html cov.trob html cpus html crabs html deaths html denumerate html dose.p html drivers html dropterm html eagles html epil html eqscplot html farms html fgl html fitdistr html forbes html fractions html galaxies html gamma.dispersion html gamma.shape.glm html gehan html genotype html geyser html gilgais html ginv html glm.convert html glm.nb html glmmPQL html hills html hist.scott html housing html huber html hubers html immer html isoMDS html kde2d html lda html ldahist html leuk html lm.gls html lm.ridge html loglm html loglm1 html logtrans html lqs html mammals html mca html mcycle html menarche html michelson html minn38 html motors html muscle html mvrnorm html negative.binomial html newcomb html nlschools html npk html npr1 html oats html painters html pairs.lda html parcoord html petrol html phones html plot.lda html plot.mca html plot.profile html polr html predict.glmmPQL html predict.lda html predict.lqs html predict.mca html predict.qda html profile.glm html qda html quine html rational html renumerate html rlm html rms.curv html rnegbin html road html rotifer html sammon html ships html shoes html shrimp html shuttle html snails html stdres html steam html stepAIC html stormer html studres html summary.loglm html summary.negbin html summary.rlm html survey html synth.tr html theta.md html topo html truehist html ucv html waders html whiteside html width.SJ html write.matrix html wtloss html ** building package indices ** testing if installed package can be loaded * DONE (MASS) Making 'packages.html' ... done begin installing recommended package lattice * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpxHGvPb/R.INSTALL829966847790/lattice/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c threeDplot.c -o threeDplot.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lattice.so init.o threeDplot.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpxHGvPb/R.INSTALL829966847790/lattice/src' installing to /builddir/build/BUILD/R-4.2.2/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'lattice' finding HTML links ... done Lattice html Rows html USMortality html axis.default html banking html barchart.table html barley html cloud html draw.colorkey html draw.key html environmental html ethanol html histogram html interaction html lattice.options html latticeParseFormula html level.colors html levelplot html llines html lset html make.groups html melanoma html oneway html packet.panel.default html panel.axis html panel.barchart html panel.bwplot html panel.cloud html panel.densityplot html panel.dotplot html panel.functions html panel.histogram html panel.levelplot html panel.loess html panel.number html panel.pairs html panel.parallel html panel.qqmath html panel.qqmathline html panel.smoothScatter html panel.spline html panel.stripplot html panel.superpose html panel.violin html panel.xyplot html prepanel.default html prepanel.functions html print.trellis html qq html qqmath html rfs html shingles html simpleKey html simpleTheme html singer html splom html strip.default html tmd html trellis.device html trellis.object html trellis.par.get html update.trellis html utilities.3d html xyplot html xyplot.ts html ** building package indices ** testing if installed package can be loaded * DONE (lattice) Making 'packages.html' ... done begin installing recommended package Matrix * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c CHMfactor.c -o CHMfactor.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Csparse.c -o Csparse.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c TMatrix_as.c -o TMatrix_as.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Tsparse.c -o Tsparse.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Mutils.c -o Mutils.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chm_common.c -o chm_common.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cs.c -o cs.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cs_utils.c -o cs_utils.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dense.c -o dense.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgCMatrix.c -o dgCMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgTMatrix.c -o dgTMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeMatrix.c -o dgeMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpoMatrix.c -o dpoMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dppMatrix.c -o dppMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dsCMatrix.c -o dsCMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dsyMatrix.c -o dsyMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dspMatrix.c -o dspMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtCMatrix.c -o dtCMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtTMatrix.c -o dtTMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtrMatrix.c -o dtrMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtpMatrix.c -o dtpMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c factorizations.c -o factorizations.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ldense.c -o ldense.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgCMatrix.c -o lgCMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparseQR.c -o sparseQR.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c abIndex.c -o abIndex.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c packedMatrix.c -o packedMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c unpackedMatrix.c -o unpackedMatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparse.c -o sparse.o sparse.c: In function 'R_sparse_drop0': sparse.c:1099:36: warning: 'nnz_' may be used uninitialized [-Wmaybe-uninitialized] 1099 | while ((kend = pp0[j]) <= nnz_) \ | ~~~~~~~~~~~~~~~~^~~~~~~ sparse.h:114:13: note: in expansion of macro 'DROP0_END' 114 | _DO_(double, REAL, ISNZ_REAL); \ | ^~~~ sparse.c:1123:9: note: in expansion of macro 'DROP0_CASES' 1123 | DROP0_CASES(tx, DROP0_END); | ^~~~~~~~~~~ sparse.c:1007:23: note: 'nnz_' was declared here 1007 | R_xlen_t k, kend, nnz_, nnz0, nnz1 = 0, n1a = 0; | ^~~~ make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD' ( cd Lib ; make clean ) make[5]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD/Lib' make[5]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD' ( cd Source ; make clean ) make[5]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD/Source' make[5]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD' ( cd Source ; make clean ) make[5]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD/Source' make[5]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/SuiteSparse_config' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/SuiteSparse_config' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD' ( cd Lib ; make -f "/builddir/build/BUILD/R-4.2.2/etc/Makeconf" -f Makefile ) make[5]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD/Lib' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_aat.c -o cholmod_aat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_add.c -o cholmod_add.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_band.c -o cholmod_band.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o In file included from ../Core/cholmod_change_factor.c:113: ../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ In file included from ../Core/cholmod_change_factor.c:115: ../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic': ../Core/cholmod_change_factor.c:262:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable] 262 | Int nsuper, xsize, ssize ; | ^~~~~ ../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric': ../Core/cholmod_change_factor.c:677:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:677:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:676:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c:676:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric': ../Core/cholmod_change_factor.c:824:9: warning: variable 'n' set but not used [-Wunused-but-set-variable] 824 | Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ; | ^ ../Core/cholmod_change_factor.c:823:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~~ ../Core/cholmod_change_factor.c:823:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_common.c -o cholmod_common.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_complex.c -o cholmod_complex.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_copy.c -o cholmod_copy.o ../Core/cholmod_copy.c: In function 'cholmod_copy': ../Core/cholmod_copy.c:275:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ ../Core/cholmod_copy.c:275:21: warning: variable 'up' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_dense.c -o cholmod_dense.o In file included from ../Core/cholmod_dense.c:45: ../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ In file included from ../Core/cholmod_dense.c:47: ../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ In file included from ../Core/cholmod_dense.c:49: ../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/cholmod_dense.c: In function 'cholmod_eye': ../Core/cholmod_dense.c:300:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 300 | Int i, n, nz ; | ^~ ../Core/cholmod_dense.c:299:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 299 | double *Xx, *Xz ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_error.c -o cholmod_error.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_factor.c -o cholmod_factor.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_memory.c -o cholmod_memory.o ../Core/cholmod_memory.c: In function 'cholmod_malloc': ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] 121 | size_t s ; | ^ ../Core/cholmod_memory.c: In function 'cholmod_realloc': ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] 311 | size_t s ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_sparse.c -o cholmod_sparse.o ../Core/cholmod_sparse.c: In function 'cholmod_copy_sparse': ../Core/cholmod_sparse.c:485:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 485 | Int p, pend, j, ncol, packed, nzmax, nz, xtype ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_transpose.c -o cholmod_transpose.o In file included from ../Core/cholmod_transpose.c:121: ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:123: ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:125: ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:128: ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:130: ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ In file included from ../Core/cholmod_transpose.c:133: ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_triplet.c -o cholmod_triplet.o In file included from ../Core/cholmod_triplet.c:105: ../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:107: ../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:109: ../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/cholmod_triplet.c: In function 'cholmod_triplet_to_sparse': ../Core/cholmod_triplet.c:342:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 342 | Int i, j, p, k, stype, nrow, ncol, nz, ok ; | ^~ ../Core/cholmod_triplet.c:341:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable] 341 | Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_version.c -o cholmod_version.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Check/cholmod_check.c -o cholmod_check.o ../Check/cholmod_check.c: In function 'check_common': ../Check/cholmod_check.c:204:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable] 204 | Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ; | ^~~~~~~~~~ ../Check/cholmod_check.c: In function 'check_dense': ../Check/cholmod_check.c:950:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 950 | Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ; | ^~ ../Check/cholmod_check.c: In function 'check_factor': ../Check/cholmod_check.c:1497:9: warning: variable 'ps2' set but not used [-Wunused-but-set-variable] 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~ ../Check/cholmod_check.c:1495:16: warning: variable 'precise' set but not used [-Wunused-but-set-variable] 1495 | count, precise, init_print, ilast, lnz, head, tail, jprev, plast, | ^~~~~~~ ../Check/cholmod_check.c:1494:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable] 1494 | Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor, | ^~~~~~~~ ../Check/cholmod_check.c: In function 'check_factor.constprop': ../Check/cholmod_check.c:1496:62: warning: 'psx' may be used uninitialized [-Wmaybe-uninitialized] 1496 | jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol, | ^~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Check/cholmod_read.c -o cholmod_read.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Check/cholmod_write.c -o cholmod_write.o ../Check/cholmod_write.c: In function 'cholmod_write_sparse': ../Check/cholmod_write.c:366:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable] 366 | Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o ../Cholesky/cholmod_analyze.c: In function 'cholmod_analyze_p2': ../Cholesky/cholmod_analyze.c:419:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable] 419 | Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol, | ^~~~ ../Cholesky/cholmod_analyze.c:416:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ ../Cholesky/cholmod_analyze.c:416:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o ../Cholesky/cholmod_factorize.c: In function 'cholmod_factorize_p': ../Cholesky/cholmod_factorize.c:111:37: warning: variable 'n' set but not used [-Wunused-but-set-variable] 111 | Int nrow, ncol, stype, convert, n, nsuper, grow2, status ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o In file included from ../Cholesky/cholmod_rowfac.c:161: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:163: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:165: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ In file included from ../Cholesky/cholmod_rowfac.c:169: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:171: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:173: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o In file included from ../Cholesky/cholmod_solve.c:63: ../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ In file included from ../Cholesky/cholmod_solve.c:66: ../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ ../Cholesky/cholmod_solve.c: In function 'iperm': ../Cholesky/cholmod_solve.c:334:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable] 334 | Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o In file included from ../MatrixOps/cholmod_sdmult.c:44: ../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:46: ../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:48: ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: 'Wz' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c: In function 'cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Modify/cholmod_updown.c -o cholmod_updown.o ../Modify/cholmod_updown.c: In function 'cholmod_updown_mask2': ../Modify/cholmod_updown.c:433:40: warning: variable 'ps1' set but not used [-Wunused-but-set-variable] 433 | *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ; | ^~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c: In function 'z_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o In file included from ../Supernodal/cholmod_super_solve.c:26: ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ In file included from ../Supernodal/cholmod_super_solve.c:28: ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_super_symbolic2': ../Supernodal/cholmod_super_symbolic.c:562:21: warning: variable 'totsize' set but not used [-Wunused-but-set-variable] 562 | Int totsize ; | ^~~~~~~ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] 185 | double max_fraction; | ^~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] 184 | const char* env_max_fraction; | ^~~~~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] 183 | size_t max_bytes; | ^~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] 182 | const char* env_max_bytes; | ^~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] 181 | const char* env_use_gpu; | ^~~~~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o ../Core/cholmod_add.c:34:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 34 | double alpha [2], /* scale factor for A */ | ~~~~~~~^~~~~~~~~ In file included from ../Core/cholmod_add.c:27: ../Include/cholmod_core.h:1582:68: note: previously declared as 'double *' 1582 | cholmod_sparse *cholmod_l_add (cholmod_sparse *, cholmod_sparse *, double *, | ^~~~~~~~ ../Core/cholmod_add.c:35:12: warning: argument 4 of type 'double[2]' with mismatched bound [-Warray-parameter=] 35 | double beta [2], /* scale factor for B */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_core.h:1583:5: note: previously declared as 'double *' 1583 | double *, int, int, cholmod_common *) ; | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o In file included from ../Core/cholmod_change_factor.c:113: ../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ In file included from ../Core/cholmod_change_factor.c:115: ../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic': ../Core/cholmod_change_factor.c:262:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable] 262 | Int nsuper, xsize, ssize ; | ^~~~~ ../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric': ../Core/cholmod_change_factor.c:677:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:677:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:676:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c:676:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric': ../Core/cholmod_change_factor.c:824:9: warning: variable 'n' set but not used [-Wunused-but-set-variable] 824 | Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ; | ^ ../Core/cholmod_change_factor.c:823:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~~ ../Core/cholmod_change_factor.c:823:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o ../Core/cholmod_copy.c: In function 'cholmod_l_copy': ../Core/cholmod_copy.c:275:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ ../Core/cholmod_copy.c:275:21: warning: variable 'up' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o In file included from ../Core/cholmod_dense.c:45: ../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ In file included from ../Core/cholmod_dense.c:47: ../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ In file included from ../Core/cholmod_dense.c:49: ../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/cholmod_dense.c: In function 'cholmod_l_eye': ../Core/cholmod_dense.c:300:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 300 | Int i, n, nz ; | ^~ ../Core/cholmod_dense.c:299:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 299 | double *Xx, *Xz ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o ../Core/cholmod_memory.c: In function 'cholmod_l_malloc': ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] 121 | size_t s ; | ^ ../Core/cholmod_memory.c: In function 'cholmod_l_realloc': ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] 311 | size_t s ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o ../Core/cholmod_sparse.c: In function 'cholmod_l_copy_sparse': ../Core/cholmod_sparse.c:485:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 485 | Int p, pend, j, ncol, packed, nzmax, nz, xtype ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o In file included from ../Core/cholmod_transpose.c:121: ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:123: ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:125: ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:128: ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:130: ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ In file included from ../Core/cholmod_transpose.c:133: ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o In file included from ../Core/cholmod_triplet.c:105: ../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:107: ../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:109: ../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/cholmod_triplet.c: In function 'cholmod_l_triplet_to_sparse': ../Core/cholmod_triplet.c:342:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 342 | Int i, j, p, k, stype, nrow, ncol, nz, ok ; | ^~ ../Core/cholmod_triplet.c:341:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable] 341 | Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o ../Check/cholmod_check.c: In function 'check_common': ../Check/cholmod_check.c:204:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable] 204 | Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ; | ^~~~~~~~~~ ../Check/cholmod_check.c: In function 'check_dense': ../Check/cholmod_check.c:950:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 950 | Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ; | ^~ ../Check/cholmod_check.c: In function 'check_factor': ../Check/cholmod_check.c:1497:9: warning: variable 'ps2' set but not used [-Wunused-but-set-variable] 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~ ../Check/cholmod_check.c:1495:16: warning: variable 'precise' set but not used [-Wunused-but-set-variable] 1495 | count, precise, init_print, ilast, lnz, head, tail, jprev, plast, | ^~~~~~~ ../Check/cholmod_check.c:1494:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable] 1494 | Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor, | ^~~~~~~~ ../Check/cholmod_check.c: In function 'check_factor.constprop': ../Check/cholmod_check.c:1496:62: warning: 'psx' may be used uninitialized [-Wmaybe-uninitialized] 1496 | jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol, | ^~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o ../Check/cholmod_write.c: In function 'cholmod_l_write_sparse': ../Check/cholmod_write.c:366:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable] 366 | Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o ../Cholesky/cholmod_analyze.c: In function 'cholmod_l_analyze_p2': ../Cholesky/cholmod_analyze.c:419:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable] 419 | Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol, | ^~~~ ../Cholesky/cholmod_analyze.c:416:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ ../Cholesky/cholmod_analyze.c:416:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o ../Cholesky/cholmod_factorize.c:101:12: warning: argument 2 of type 'double[2]' with mismatched bound [-Warray-parameter=] 101 | double beta [2], /* factorize beta*I+A or beta*I+A'*A */ | ~~~~~~~^~~~~~~~ In file included from ../Cholesky/cholmod_factorize.c:58: ../Include/cholmod_cholesky.h:168:46: note: previously declared as 'double *' 168 | int cholmod_l_factorize_p (cholmod_sparse *, double *, SuiteSparse_long *, | ^~~~~~~~ ../Cholesky/cholmod_factorize.c: In function 'cholmod_l_factorize_p': ../Cholesky/cholmod_factorize.c:111:37: warning: variable 'n' set but not used [-Wunused-but-set-variable] 111 | Int nrow, ncol, stype, convert, n, nsuper, grow2, status ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o In file included from ../Cholesky/cholmod_rowfac.c:161: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:163: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:165: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ In file included from ../Cholesky/cholmod_rowfac.c:169: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:171: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:173: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/cholmod_rowfac.c: At top level: ../Cholesky/cholmod_rowfac.c:577:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 577 | double beta [2], /* factorize beta*I+A or beta*I+AA' */ | ~~~~~~~^~~~~~~~ In file included from ../Cholesky/cholmod_rowfac.c:103: ../Include/cholmod_cholesky.h:387:59: note: previously declared as 'double *' 387 | int cholmod_l_rowfac (cholmod_sparse *, cholmod_sparse *, double *, size_t, | ^~~~~~~~ ../Cholesky/cholmod_rowfac.c:602:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 602 | double beta [2], /* factorize beta*I+A or beta*I+AA' */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_cholesky.h:413:64: note: previously declared as 'double *' 413 | int cholmod_l_rowfac_mask (cholmod_sparse *, cholmod_sparse *, double *, size_t, | ^~~~~~~~ ../Cholesky/cholmod_rowfac.c:629:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 629 | double beta [2], /* factorize beta*I+A or beta*I+AA' */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_cholesky.h:434:65: note: previously declared as 'double *' 434 | int cholmod_l_rowfac_mask2 (cholmod_sparse *, cholmod_sparse *, double *, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o In file included from ../Cholesky/cholmod_solve.c:63: ../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ In file included from ../Cholesky/cholmod_solve.c:66: ../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ ../Cholesky/cholmod_solve.c: In function 'iperm': ../Cholesky/cholmod_solve.c:334:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable] 334 | Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o In file included from ../MatrixOps/cholmod_sdmult.c:44: ../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:46: ../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:48: ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/cholmod_sdmult.c: At top level: ../MatrixOps/cholmod_sdmult.c:59:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 59 | double alpha [2], /* scale factor for A */ | ~~~~~~~^~~~~~~~~ In file included from ../MatrixOps/cholmod_sdmult.c:36: ../Include/cholmod_matrixops.h:143:46: note: previously declared as 'double *' 143 | int cholmod_l_sdmult (cholmod_sparse *, int, double *, double *, | ^~~~~~~~ ../MatrixOps/cholmod_sdmult.c:60:12: warning: argument 4 of type 'double[2]' with mismatched bound [-Warray-parameter=] 60 | double beta [2], /* scale factor for Y */ | ~~~~~~~^~~~~~~~ ../Include/cholmod_matrixops.h:143:56: note: previously declared as 'double *' 143 | int cholmod_l_sdmult (cholmod_sparse *, int, double *, double *, | ^~~~~~~~ ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: 'Wz' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c: In function 'cholmod_l_sdmult': ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o ../Modify/cholmod_rowadd.c:72:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 72 | double bk [2], /* kth entry of the right-hand-side b */ | ~~~~~~~^~~~~~ In file included from ../Modify/cholmod_rowadd.c:24: ../Include/cholmod_modify.h:215:55: note: previously declared as 'double *' 215 | int cholmod_l_rowadd_solve (size_t, cholmod_sparse *, double *, | ^~~~~~~~ ../Modify/cholmod_rowadd.c:116:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 116 | double bk [2], /* kth entry of the right hand side, b */ | ~~~~~~~^~~~~~ ../Include/cholmod_modify.h:241:54: note: previously declared as 'double *' 241 | int cholmod_l_rowadd_mark (size_t, cholmod_sparse *, double *, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o ../Modify/cholmod_rowdel.c:72:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 72 | double yk [2], /* kth entry in the solution to A*y=b */ | ~~~~~~~^~~~~~ In file included from ../Modify/cholmod_rowdel.c:25: ../Include/cholmod_modify.h:294:55: note: previously declared as 'double *' 294 | int cholmod_l_rowdel_solve (size_t, cholmod_sparse *, double *, | ^~~~~~~~ ../Modify/cholmod_rowdel.c:104:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 104 | double yk [2], /* kth entry in the solution to A*y=b */ | ~~~~~~~^~~~~~ ../Include/cholmod_modify.h:320:54: note: previously declared as 'double *' 320 | int cholmod_l_rowdel_mark (size_t, cholmod_sparse *, double *, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o ../Modify/cholmod_updown.c: In function 'cholmod_l_updown_mask2': ../Modify/cholmod_updown.c:433:40: warning: variable 'ps1' set but not used [-Wunused-but-set-variable] 433 | *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ; | ^~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c: In function 'z_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/cholmod_super_numeric.c: At top level: ../Supernodal/cholmod_super_numeric.c:102:12: warning: argument 3 of type 'double[2]' with mismatched bound [-Warray-parameter=] 102 | double beta [2], /* beta*I is added to diagonal of matrix to factorize */ | ~~~~~~~^~~~~~~~ In file included from ../Supernodal/cholmod_super_numeric.c:60: ../Include/cholmod_supernodal.h:120:66: note: previously declared as 'double *' 120 | int cholmod_l_super_numeric (cholmod_sparse *, cholmod_sparse *, double *, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o In file included from ../Supernodal/cholmod_super_solve.c:26: ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ In file included from ../Supernodal/cholmod_super_solve.c:28: ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_l_super_symbolic2': ../Supernodal/cholmod_super_symbolic.c:562:21: warning: variable 'totsize' set but not used [-Wunused-but-set-variable] 562 | Int totsize ; | ^~~~~~~ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] 185 | double max_fraction; | ^~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] 184 | const char* env_max_fraction; | ^~~~~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] 183 | size_t max_bytes; | ^~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] 182 | const char* env_max_bytes; | ^~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] 181 | const char* env_use_gpu; | ^~~~~~~~~~~ ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o make[5]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD' ( cd Source ; make -f "/builddir/build/BUILD/R-4.2.2/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD/Source' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c colamd.c -o colamd.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c colamd.c -o colamd_l.o ar -rucs ../../COLAMD.a colamd.o colamd_l.o make[5]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD' ( cd Source ; make -f "/builddir/build/BUILD/R-4.2.2/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD/Source' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_1.c -o amd_i_1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_1.c -o amd_l_1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_2.c -o amd_i_2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_2.c -o amd_l_2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_order.c -o amd_i_order.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_order.c -o amd_l_order.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_control.c -o amd_i_control.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_control.c -o amd_l_control.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_info.c -o amd_i_info.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_info.c -o amd_l_info.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o make[5]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/AMD' make[4]: Entering directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/SuiteSparse_config' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -DNTIMER -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c SuiteSparse_config.c -o SuiteSparse_config.o ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o make[4]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src/SuiteSparse_config' gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o packedMatrix.o unpackedMatrix.o sparse.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -lflexiblas -lflexiblas -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpIsJ2B8/R.INSTALL82c53ff43bca/Matrix/src' installing to /builddir/build/BUILD/R-4.2.2/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'drop' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csc","RsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.coo","RsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","sparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","sparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","sparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"Matrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"Matrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"Matrix","matrix.coo"': no definition for class "matrix.coo" Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'crossprod' from package 'base' in package 'Matrix' Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"graphAM","TsparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","RsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","TsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","sparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"Matrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"Matrix","graph"': no definition for class "graph" Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' ** help *** installing help indices converting help for package 'Matrix' finding HTML links ... done BunchKaufman-methods html CAex html CHMfactor-class html Cholesky-class html Cholesky html CsparseMatrix-class html Diagonal html Hilbert html KNex html KhatriRao html LU-class html Matrix-class html Matrix html MatrixClass html MatrixFactorization-class html RsparseMatrix-class html Schur-class html Schur html SparseM-conv html Subassign-methods html TsparseMatrix-class html USCounties html Xtrct-methods html abIndex-class html abIseq html all-methods html all.equal-methods html atomicVector-class html band html bandSparse html bdiag html boolean-matprod html cBind html chol html chol2inv-methods html colSums html compMatrix-class html condest html dMatrix-class html ddenseMatrix-class html ddiMatrix-class html denseMatrix-class html dgCMatrix-class html dgRMatrix-class html dgTMatrix-class html dgeMatrix-class html diagU2N html diagonalMatrix-class html dmperm html dpoMatrix-class html drop0 html dsCMatrix-class html dsRMatrix-class html dsparseMatrix-class html dsyMatrix-class html dtCMatrix-class html dtRMatrix-class-def html dtpMatrix-class html dtrMatrix-class html expand html expm html externalFormats html facmul html forceSymmetric html formatSparseM html generalMatrix-class html graph2T html image-methods html indMatrix-class html index-class html invPerm html is.na-methods html is.null.DN html isSymmetric-methods html isTriangular html kronecker-methods html ldenseMatrix-class html ldiMatrix-class html lgeMatrix-class html lsparseMatrix-classes html lsyMatrix-class html ltrMatrix-class html lu html mat2triplet html matrix-products html nMatrix-class html ndenseMatrix-class html nearPD html ngeMatrix-class html nnzero html norm html nsparseMatrix-classes html nsyMatrix-class html ntrMatrix-class html number-class html pMatrix-class html packedMatrix-class html printSpMatrix html qr-methods html rankMatrix html rcond html rep2abI html replValue-class html rleDiff-class html rsparsematrix html solve-methods html spMatrix html sparse.model.matrix html sparseLU-class html sparseMatrix-class html sparseMatrix html sparseQR-class html sparseVector-class html sparseVector html symmetricMatrix-class html symmpart html triangularMatrix-class html uniqTsparse html unpack html unpackedMatrix-class html unused-classes html updown html wrld_1deg html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) Making 'packages.html' ... done begin installing recommended package nlme * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpK0tlIl/R.INSTALL84e5383a537f/nlme/src' gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c chol.f -o chol.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c corStruct.c -o corStruct.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gnls.c -o gnls.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c matrix.c -o matrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nlOptimizer.c -o nlOptimizer.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nlme.c -o nlme.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nlmefit.c -o nlmefit.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pdMat.c -o pdMat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pythag.c -o pythag.o gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c rs.f -o rs.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpK0tlIl/R.INSTALL84e5383a537f/nlme/src' installing to /builddir/build/BUILD/R-4.2.2/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nlme' finding HTML links ... done ACF html ACF.gls html ACF.lme html Alfalfa html Assay html BodyWeight html Cefamandole html Coef html Covariate html Covariate.varFunc html Dialyzer html Dim html Dim.corSpatial html Dim.corStruct html Dim.pdMat html Earthquake html Extract.pdMat html Fatigue html Gasoline html Glucose html Glucose2 html Gun html IGF html Initialize html Initialize.corStruct html Initialize.glsStruct html Initialize.lmeStruct html Initialize.reStruct html Initialize.varFunc html LDEsysMat html Machines html MathAchSchool html MathAchieve html Matrix html Matrix.pdMat html Matrix.reStruct html Meat html Milk html Muscle html Names html Names.formula html Names.pdBlocked html Names.pdMat html Names.reStruct html Nitrendipene html Oats html Orthodont html Ovary html Oxboys html Oxide html PBG html Phenobarb html Pixel html Quinidine html Rail html RatPupWeight html Relaxin html Remifentanil html Soybean html Spruce html Tetracycline1 html Tetracycline2 html VarCorr html Variogram html Variogram.corExp html Variogram.corGaus html Variogram.corLin html Variogram.corRatio html Variogram.corSpatial html Variogram.corSpher html Variogram.default html Variogram.gls html Variogram.lme html Wafer html Wheat html Wheat2 html allCoef html anova.gls html anova.lme html as.matrix.corStruct html as.matrix.pdMat html as.matrix.reStruct html asOneFormula html asTable html augPred html balancedGrouped html bdf html coef.corStruct html coef.gnls html coef.lmList html coef.lme html coef.modelStruct html coef.pdMat html coef.reStruct html coef.varFunc html collapse html collapse.groupedData html compareFits html comparePred html corAR1 html corARMA html corCAR1 html corClasses html corCompSymm html corExp html corFactor html corFactor.corStruct html corGaus html corLin html corMatrix html corMatrix.corStruct html corMatrix.pdMat html corMatrix.reStruct html corNatural html corRatio html corSpatial html corSpher html corSymm html ergoStool html fdHess html fitted.glsStruct html fitted.gnlsStruct html fitted.lmList html fitted.lme html fitted.lmeStruct html fitted.nlmeStruct html fixed.effects html fixef.lmList html formula.pdBlocked html formula.pdMat html formula.reStruct html gapply html getCovariate html getCovariate.corStruct html getCovariate.data.frame html getCovariate.varFunc html getCovariateFormula html getData html getData.gls html getData.lmList html getData.lme html getGroups html getGroups.corStruct html getGroups.data.frame html getGroups.gls html getGroups.lmList html getGroups.lme html getGroups.varFunc html getGroupsFormula html getResponse html getResponseFormula html getVarCov html gls-internal html gls html glsControl html glsObject html glsStruct html gnls html gnlsControl html gnlsObject html gnlsStruct html groupedData html gsummary html intervals html intervals.gls html intervals.lmList html intervals.lme html isBalanced html isInitialized html lmList html lmList.groupedData html lme html lme.groupedData html lme.lmList html lmeControl html lmeObject html lmeStruct html logDet html logDet.corStruct html logDet.pdMat html logDet.reStruct html logLik.corStruct html logLik.glsStruct html logLik.gnls html logLik.gnlsStruct html logLik.lmList html logLik.lme html logLik.lmeStruct html logLik.reStruct html logLik.varFunc html model.matrix.reStruct html needUpdate html needUpdate.modelStruct html nlme html nlme.nlsList html nlmeControl html nlmeObject html nlmeStruct html nlsList html nlsList.selfStart html pairs.compareFits html pairs.lmList html pairs.lme html pdBlocked html pdClasses html pdCompSymm html pdConstruct html pdConstruct.pdBlocked html pdDiag html pdFactor html pdFactor.reStruct html pdIdent html pdLogChol html pdMat html pdMatrix html pdMatrix.reStruct html pdNatural html pdSymm html phenoModel html plot.ACF html plot.Variogram html plot.augPred html plot.compareFits html plot.gls html plot.intervals.lmList html plot.lmList html plot.lme html plot.nffGroupedData html plot.nfnGroupedData html plot.nmGroupedData html plot.ranef.lmList html plot.ranef.lme html pooledSD html predict.gls html predict.gnls html predict.lmList html predict.lme html predict.nlme html print.summary.pdMat html print.varFunc html qqnorm.gls html qqnorm.lme html quinModel html random.effects html ranef.lmList html ranef.lme html reStruct html recalc html recalc.corStruct html recalc.modelStruct html recalc.reStruct html recalc.varFunc html residuals.gls html residuals.glsStruct html residuals.gnlsStruct html residuals.lmList html residuals.lme html residuals.lmeStruct html residuals.nlmeStruct html simulate.lme html solve.pdMat html solve.reStruct html splitFormula html summary.corStruct html summary.gls html summary.lmList html summary.lme html summary.modelStruct html summary.nlsList html summary.pdMat html summary.varFunc html update.modelStruct html update.varFunc html varClasses html varComb html varConstPower html varConstProp html varExp html varFixed html varFunc html varIdent html varPower html varWeights html varWeights.glsStruct html varWeights.lmeStruct html ** building package indices ** testing if installed package can be loaded * DONE (nlme) Making 'packages.html' ... done begin installing recommended package survival * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmp84vsSg/R.INSTALL853456206e32/survival/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agexact.c -o agexact.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agfit4.c -o agfit4.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agfit5.c -o agfit5.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agmart.c -o agmart.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agmart3.c -o agmart3.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agscore2.c -o agscore2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agsurv3.c -o agsurv3.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agsurv4.c -o agsurv4.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agsurv5.c -o agsurv5.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cdecomp.c -o cdecomp.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chinv2.c -o chinv2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chinv3.c -o chinv3.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cholesky2.c -o cholesky2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cholesky3.c -o cholesky3.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cholesky5.c -o cholesky5.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chsolve2.c -o chsolve2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chsolve3.c -o chsolve3.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chsolve5.c -o chsolve5.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c collapse.c -o collapse.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c concordance1.c -o concordance1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c concordance3.c -o concordance3.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c concordance5.c -o concordance5.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cox_Rcallback.c -o cox_Rcallback.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxcount1.c -o coxcount1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxdetail.c -o coxdetail.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxexact.c -o coxexact.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxfit5.c -o coxfit5.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxfit6.c -o coxfit6.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxmart.c -o coxmart.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxmart2.c -o coxmart2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxph_wtest.c -o coxph_wtest.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsafe.c -o coxsafe.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxscho.c -o coxscho.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxscore2.c -o coxscore2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsurv1.c -o coxsurv1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsurv2.c -o coxsurv2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dmatrix.c -o dmatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c doloop.c -o doloop.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c finegray.c -o finegray.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gchol.c -o gchol.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c multicheck.c -o multicheck.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c norisk.c -o norisk.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pyears1.c -o pyears1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pyears2.c -o pyears2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pyears3b.c -o pyears3b.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pystep.c -o pystep.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survConcordance.c -o survConcordance.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survdiff2.c -o survdiff2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfit4.c -o survfit4.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfitci.c -o survfitci.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfitkm.c -o survfitkm.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfitresid.c -o survfitresid.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survpenal.c -o survpenal.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survreg6.c -o survreg6.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survreg7.c -o survreg7.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survregc1.c -o survregc1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survregc2.c -o survregc2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survsplit.c -o survsplit.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tmerge.c -o tmerge.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c zph1.c -o zph1.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c zph2.c -o zph2.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agsurv3.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o dmatrix.o doloop.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o zph1.o zph2.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/Rtmp84vsSg/R.INSTALL853456206e32/survival/src' installing to /builddir/build/BUILD/R-4.2.2/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'survival' finding HTML links ... done Surv html Surv2 html Surv2data html Survmethods html aareg html aeqSurv html aggregate.survfit html agreg.fit html aml html anova.coxph html attrassign html basehaz html bladder html blogit html cch html cgd html cgd0 html cipoisson html clogit html cluster html colon html concordance html concordancefit html cox.zph html coxph html coxph.control html coxph.detail html coxph.object html coxph.wtest html coxphms.object html coxsurv.fit html diabetic html dsurvreg html finegray html flchain html frailty html gbsg html heart html is.ratetable html kidney html levels.Surv html lines.survfit html logLik.coxph html logan html lung html mgus html mgus2 html model.frame.coxph html model.matrix.coxph html myeloid html myeloma html nafld html neardate html nsk html nwtco html ovarian html pbc html pbcseq html plot.aareg html plot.cox.zph html plot.survfit html predict.coxph html predict.survreg html print.aareg html print.summary.coxph html print.summary.survexp html print.summary.survfit html print.survfit html pseudo html pspline html pyears html quantile.survfit html ratetable html ratetableDate html rats html rats2 html reliability html residuals.coxph html residuals.survfit html residuals.survreg html retinopathy html rhDNase html ridge html rotterdam html royston html rttright html solder html stanford2 html statefig html strata html summary.aareg html summary.coxph html summary.pyears html summary.survexp html summary.survfit html survSplit html survcheck html survdiff html survexp html survexp.fit html survexp.object html survexp.us html survfit html survfit.coxph html survfit.formula html survfit.matrix html survfit.object html survfit0 html survfitcoxph.fit html survival-deprecated html survival-internal html survobrien html survreg html survreg.control html survreg.distributions html survreg.object html survregDtest html tcut html tmerge html tobin html transplant html udca html untangle.specials html uspop2 html vcov.coxph html veteran html xtfrm.Surv html yates html yates_setup html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) Making 'packages.html' ... done begin installing recommended package boot * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'boot' finding HTML links ... done EEF.profile html Imp.Estimates html abc.ci html acme html aids html aircondit html amis html aml html beaver html bigcity html boot-practicals html boot html boot.array html boot.ci html brambles html breslow html calcium html cane html capability html catsM html cav html cd4 html cd4.nested html censboot html channing html claridge html cloth html co.transfer html coal html control html corr html cum3 html cv.glm html darwin html dogs html downs.bc html ducks html empinf html envelope html exp.tilt html fir html freq.array html frets html glm.diag html glm.diag.plots html gravity html hirose html imp.weights html inv.logit html islay html jack.after.boot html k3.linear html linear.approx html lines.saddle.distn html logit html manaus html melanoma html motor html neuro html nitrofen html nodal html norm.ci html nuclear html paulsen html plot.boot html poisons html polar html print.boot html print.bootci html print.saddle.distn html print.simplex html remission html saddle html saddle.distn html saddle.distn.object html salinity html simplex html simplex.object html smooth.f html sunspot html survival html tau html tilt.boot html tsboot html tuna html urine html var.linear html wool html ** building package indices ** testing if installed package can be loaded * DONE (boot) Making 'packages.html' ... done begin installing recommended package cluster * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpmFLw0a/R.INSTALL863e4a4e8c6c/cluster/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clara.c -o clara.o gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c daisy.f -o daisy.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dysta.f -o dysta.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fanny.c -o fanny.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mona.c -o mona.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pam.c -o pam.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sildist.c -o sildist.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c spannel.c -o spannel.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c twins.c -o twins.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpmFLw0a/R.INSTALL863e4a4e8c6c/cluster/src' installing to /builddir/build/BUILD/R-4.2.2/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'cluster' finding HTML links ... done agnes html agnes.object html agriculture html animals html bannerplot html chorSub html clara html clara.object html clusGap html clusplot.default html clusplot.partition html cluster-internal html coef.hclust html daisy html diana html dissimilarity.object html ellipsoidhull html fanny html fanny.object html flower html lower.to.upper.tri.inds html medoids html mona html mona.object html pam html pam.object html partition.object html plantTraits html plot.agnes html plot.diana html plot.mona html plot.partition html pltree html pluton html predict.ellipsoid html print.agnes html print.clara html print.diana html print.dissimilarity html print.fanny html print.mona html print.pam html ruspini html silhouette html sizeDiss html summary.agnes html summary.clara html summary.diana html summary.mona html summary.pam html twins.object html volume.ellipsoid html votes.repub html xclara html ** building package indices ** testing if installed package can be loaded * DONE (cluster) Making 'packages.html' ... done begin installing recommended package codetools * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'codetools' finding HTML links ... done checkUsage html codetools html findGlobals html showTree html ** building package indices ** testing if installed package can be loaded * DONE (codetools) Making 'packages.html' ... done begin installing recommended package foreign * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpqmVHUf/R.INSTALL86a727633018/foreign/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c R_systat.c -o R_systat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rdbfread.c -o Rdbfread.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rdbfwrite.c -o Rdbfwrite.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c SASxport.c -o SASxport.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c avl.c -o avl.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbfopen.c -o dbfopen.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c file-handle.c -o file-handle.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c format.c -o format.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c minitab.c -o minitab.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pfm-read.c -o pfm-read.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sfm-read.c -o sfm-read.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c spss.c -o spss.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stataread.c -o stataread.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpqmVHUf/R.INSTALL86a727633018/foreign/src' installing to /builddir/build/BUILD/R-4.2.2/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'foreign' finding HTML links ... done lookup.xport html read.S html read.arff html read.dbf html read.dta html read.epiinfo html read.mtp html read.octave html read.spss html read.ssd html read.systat html read.xport html write.arff html write.dbf html write.dta html write.foreign html ** building package indices ** testing if installed package can be loaded * DONE (foreign) Making 'packages.html' ... done begin installing recommended package KernSmooth * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmprcqAWl/R.INSTALL86f956a9c664/KernSmooth/src' gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c blkest.f -o blkest.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c cp.f -o cp.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dgedi.f -o dgedi.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dgefa.f -o dgefa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dgesl.f -o dgesl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c linbin.f -o linbin.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c linbin2D.f -o linbin2D.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c locpoly.f -o locpoly.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c rlbin.f -o rlbin.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sdiag.f -o sdiag.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -fno-optimize-sibling-calls -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sstdiag.f -o sstdiag.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lflexiblas -L -L -lgfortran -lm -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmprcqAWl/R.INSTALL86f956a9c664/KernSmooth/src' installing to /builddir/build/BUILD/R-4.2.2/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'KernSmooth' finding HTML links ... done bkde html bkde2D html bkfe html dpih html dpik html dpill html locpoly html ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) Making 'packages.html' ... done begin installing recommended package rpart * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmpdcb9UE/R.INSTALL874569ed034b/rpart/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c anova.c -o anova.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c anovapred.c -o anovapred.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c branch.c -o branch.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bsplit.c -o bsplit.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose_surg.c -o choose_surg.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fix_cp.c -o fix_cp.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c free_tree.c -o free_tree.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gini.c -o gini.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c graycode.c -o graycode.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c insert_split.c -o insert_split.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c make_cp_list.c -o make_cp_list.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c make_cp_table.c -o make_cp_table.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mysort.c -o mysort.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nodesplit.c -o nodesplit.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c partition.c -o partition.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c poisson.c -o poisson.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pred_rpart.c -o pred_rpart.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c print_tree.c -o print_tree.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpart.c -o rpart.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpart_callback.c -o rpart_callback.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpartexp.c -o rpartexp.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpartexp2.c -o rpartexp2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpcountup.c -o rpcountup.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpmatrix.c -o rpmatrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rundown.c -o rundown.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rundown2.c -o rundown2.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c surrogate.c -o surrogate.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c usersplit.c -o usersplit.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c xpred.c -o xpred.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c xval.c -o xval.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/Rtmpdcb9UE/R.INSTALL874569ed034b/rpart/src' installing to /builddir/build/BUILD/R-4.2.2/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'rpart' finding HTML links ... done car.test.frame html car90 html cu.summary html kyphosis html labels.rpart html meanvar.rpart html na.rpart html path.rpart html plot.rpart html plotcp html post.rpart html predict.rpart html print.rpart html printcp html prune.rpart html residuals.rpart html rpart-internal html rpart html rpart.control html rpart.exp html rpart.object html rsq.rpart html snip.rpart html solder.balance html stagec html summary.rpart html text.rpart html xpred.rpart html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) Making 'packages.html' ... done begin installing recommended package class * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmp0CmaJ6/R.INSTALL87c845e5d21f/class/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c class.c -o class.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o class.so class.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/Rtmp0CmaJ6/R.INSTALL87c845e5d21f/class/src' installing to /builddir/build/BUILD/R-4.2.2/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'class' finding HTML links ... done SOM html batchSOM html condense html knn html knn.cv html knn1 html lvq1 html lvq2 html lvq3 html lvqinit html lvqtest html multiedit html olvq1 html reduce.nn html somgrid html ** building package indices ** testing if installed package can be loaded * DONE (class) Making 'packages.html' ... done begin installing recommended package nnet * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpCol0SN/R.INSTALL87f130ee8c0b/nnet/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nnet.c -o nnet.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nnet.so nnet.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpCol0SN/R.INSTALL87f130ee8c0b/nnet/src' installing to /builddir/build/BUILD/R-4.2.2/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nnet' finding HTML links ... done class.ind html multinom html nnet.Hess html nnet html predict.nnet html which.is.max html ** building package indices ** testing if installed package can be loaded * DONE (nnet) Making 'packages.html' ... done begin installing recommended package spatial * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/RtmpM3JsK6/R.INSTALL881a1a28b78c/spatial/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c krc.c -o krc.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pps.c -o pps.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o spatial.so init.o krc.o pps.o -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/RtmpM3JsK6/R.INSTALL881a1a28b78c/spatial/src' installing to /builddir/build/BUILD/R-4.2.2/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'spatial' finding HTML links ... done Kaver html Kenvl html Kfn html Psim html SSI html Strauss html anova.trls html correlogram html expcov html ppgetregion html ppinit html pplik html ppregion html predict.trls html prmat html semat html surf.gls html surf.ls html trls.influence html trmat html variogram html ** building package indices ** testing if installed package can be loaded * DONE (spatial) Making 'packages.html' ... done begin installing recommended package mgcv * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs make[3]: Entering directory '/tmp/Rtmp9pIaua/R.INSTALL884d58bef81d/mgcv/src' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxph.c -o coxph.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c davies.c -o davies.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c discrete.c -o discrete.o discrete.c: In function 'XWXijspace': discrete.c:1074:11: warning: unused variable 'kk' [-Wunused-variable] 1074 | jm,im,kk,ddtj, | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gdi.c -o gdi.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c magic.c -o magic.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mat.c -o mat.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c matrix.c -o matrix.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mgcv.c -o mgcv.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c misc.c -o misc.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mvn.c -o mvn.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ncv.c -o ncv.o ncv.c: In function 'ncvls': ncv.c:832:76: warning: 'deta' may be used uninitialized [-Wmaybe-uninitialized] 832 | double *X,*H,*Hi,*l1,*l2,*l3=NULL,*beta,*g,*Hp,xx,z,*d,*d1,*cgwork,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh; | ^~~~ ncv.c: In function 'Rncvls0': ncv.c:983:64: warning: 'deta' may be used uninitialized [-Wmaybe-uninitialized] 983 | double *X,*R,*l1,*l2,*l3=NULL,*beta,*g,*R0,xx,z,*d,*d1,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh,*b,alpha,alpha0,eps,*Rb,*ddbuf,*p0,*p3,*work; | ^~~~ In file included from ncv.c:31: mgcv.h:62:14: warning: 'ddbuf' may be used uninitialized [-Wmaybe-uninitialized] 62 | #define FREE R_chk_free ncv.c:1152:20: note: in expansion of macro 'FREE' 1152 | if (buffer_size) FREE(ddbuf); | ^~~~ ncv.c:983:122: note: 'ddbuf' was declared here 983 | double *X,*R,*l1,*l2,*l3=NULL,*beta,*g,*R0,xx,z,*d,*d1,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh,*b,alpha,alpha0,eps,*Rb,*ddbuf,*p0,*p3,*work; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qp.c -o qp.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c soap.c -o soap.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparse-smooth.c -o sparse-smooth.o sparse-smooth.c: In function 'sspl_apply': sparse-smooth.c:1673:24: warning: 'w2' may be used uninitialized [-Wmaybe-uninitialized] 1673 | if (!ok) { w[k] = sqrt(w2);y[k] /= w2;} | ^~~~~~~~ sparse-smooth.c:1667:36: note: 'w2' was declared here 1667 | *V0s,*V0c,*V1s,*V1c,*p,*p1,*p2,w2,*xx; | ^~ gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparse.c -o sparse.o gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tprs.c -o tprs.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o mgcv.so coxph.o davies.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o ncv.o qp.o soap.o sparse-smooth.o sparse.o tprs.o -lflexiblas -lflexiblas -L -L -lgfortran -lm -fopenmp -L/builddir/build/BUILD/R-4.2.2/lib -lR make[3]: Leaving directory '/tmp/Rtmp9pIaua/R.INSTALL884d58bef81d/mgcv/src' installing to /builddir/build/BUILD/R-4.2.2/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'mgcv' finding HTML links ... done Beta html FFdes html Predict.matrix html Predict.matrix.cr.smooth html Predict.matrix.soap.film html Rrank html Sl.initial.repara html Sl.repara html Sl.setup html Tweedie html XWXd html anova.gam html bam html bam.update html bandchol html blas.thread.test html bug.reports.mgcv html cSplineDes html chol.down html choose.k html cnorm html columb html concurvity html coxph html coxpht html dDeta html dpnorm html exclude.too.far html extract.lme.cov html factor.smooth html family.mgcv html fix.family.link html fixDependence html formXtViX html formula.gam html fs.test html full.score html gam html gam.check html gam.control html gam.convergence html gam.fit html gam.fit3 html gam.fit5.post.proc html gam.mh html gam.models html gam.outer html gam.reparam html gam.scale html gam.selection html gam.side html gam.vcomp html gam2objective html gamObject html gamSim html gamlss.etamu html gamlss.gH html gamm html gammals html gaulss html get.var html gevlss html ginla html gumbls html identifiability html in.out html inSide html influence.gam html initial.sp html interpret.gam html jagam html k.check html ldTweedie html ldetS html linear.functional.terms html logLik.gam html ls.size html magic html magic.post.proc html mgcv-FAQ html mgcv-package html mgcv-parallel html mini.roots html missing.data html model.matrix.gam html mono.con html mroot html multinom html mvn html negbin html new.name html notExp html notExp2 html null.space.dimension html ocat html one.se.rule html pcls html pdIdnot html pdTens html pen.edf html place.knots html plot.gam html polys.plot html predict.bam html predict.gam html print.gam html psum.chisq html qq.gam html rTweedie html random.effects html residuals.gam html rig html rmvn html s html scat html sdiag html shash html single.index html slanczos html smooth.construct html smooth.construct.ad.smooth.spec html smooth.construct.bs.smooth.spec html smooth.construct.cr.smooth.spec html smooth.construct.ds.smooth.spec html smooth.construct.fs.smooth.spec html smooth.construct.gp.smooth.spec html smooth.construct.mrf.smooth.spec html smooth.construct.ps.smooth.spec html smooth.construct.re.smooth.spec html smooth.construct.so.smooth.spec html smooth.construct.sos.smooth.spec html smooth.construct.sz.smooth.spec html smooth.construct.t2.smooth.spec html smooth.construct.tensor.smooth.spec html smooth.construct.tp.smooth.spec html smooth.info html smooth.terms html smooth2random html smoothCon html sp.vcov html spasm.construct html step.gam html summary.gam html t2 html te html tensor.prod.model.matrix html totalPenaltySpace html trichol html trind.generator html twlss html uniquecombs html vcov.gam html vis.gam html ziP html ziplss html ** building package indices ** testing if installed package can be loaded * DONE (mgcv) Making 'packages.html' ... done make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/Recommended' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library/Recommended' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library' building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... building/updating vignettes for package 'stats' ... processing 'reshape.Rnw' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2' configuring Java ... Java interpreter : /usr/bin/java Java version : 17.0.4.1 Java home path : /usr/lib/jvm/jre Java compiler : /usr/bin/javac Java headers gen.: Java archive tool: /usr/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm make[2]: Entering directory '/tmp/Rjavareconf.N2gzvQ' gcc -I"/builddir/build/BUILD/R-4.2.2/include" -DNDEBUG -I/usr/lib/jvm/jre/include -I/usr/lib/jvm/jre/include/linux -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c conftest.c -o conftest.o gcc -shared -L/builddir/build/BUILD/R-4.2.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o conftest.so conftest.o -L/usr/lib/jvm/jre/lib/server -ljvm -L/builddir/build/BUILD/R-4.2.2/lib -lR make[2]: Leaving directory '/tmp/Rjavareconf.N2gzvQ' JAVA_HOME : /usr/lib/jvm/jre Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /builddir/build/BUILD/R-4.2.2 Done. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2' + cd src/nmath/standalone + make (cd ../../include; make Rmath.h) make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/include' Copying source files make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libRmath.so mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/nmath/standalone' + make pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... Converting parsed Rd's to LaTeX ........................................... collecting LaTeX docs for package 'tools' ... Converting parsed Rd's to LaTeX ...... collecting LaTeX docs for package 'utils' ... Converting parsed Rd's to LaTeX ............... collecting LaTeX docs for package 'grDevices' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'graphics' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'stats' ... Converting parsed Rd's to LaTeX ............................... collecting LaTeX docs for package 'datasets' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'methods' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'grid' ... Converting parsed Rd's to LaTeX .......... collecting LaTeX docs for package 'splines' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'stats4' ... 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Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'foreign' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'KernSmooth' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'rpart' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'class' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'nnet' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'spatial' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'mgcv' ... Converting parsed Rd's to LaTeX ............... PDF/LaTeX documentation: full reference index ... 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Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 330--333 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . 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[116] Underfull \hbox (badness 2351) in paragraph at lines 8071--8074 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [117] [118] [119] [120] [121] Underfull \hbox (badness 4479) in paragraph at lines 8388--8399 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [122] [123] [124] [125] [126] [127] Underfull \hbox (badness 1629) in paragraph at lines 8842--8854 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 8842--8854 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] Underfull \hbox (badness 1178) in paragraph at lines 9595--9599 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] Underfull \hbox (badness 2744) in paragraph at lines 11904--11906 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] Underfull \hbox (badness 2253) in paragraph at lines 14100--14102 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [201] Underfull \hbox (badness 1490) in paragraph at lines 14135--14138 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [202] Underfull \hbox (badness 1565) in paragraph at lines 14217--14221 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [203] Underfull \hbox (badness 4927) in paragraph at lines 14268--14270 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [204] Underfull \hbox (badness 3148) in paragraph at lines 14370--14375 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider [205] Underfull \hbox (badness 1466) in paragraph at lines 14417--14420 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [206] Underfull \hbox (badness 10000) in paragraph at lines 14548--14552 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14559--14562 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [207] [208] [209] [210] [211] Underfull \hbox (badness 3965) in paragraph at lines 14856--14860 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] Underfull \hbox (badness 4429) in paragraph at lines 15645--15648 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 15751--15753 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [225] Underfull \hbox (badness 2035) in paragraph at lines 15824--15828 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [226] [227] [228] [229] [230] [231] [232] [233] [234] Underfull \hbox (badness 2452) in paragraph at lines 16437--16441 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16437--16441 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [235] [236] Underfull \hbox (badness 1092) in paragraph at lines 16610--16615 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [237] [238] [239] [240] Underfull \hbox (badness 6741) in paragraph at lines 16863--16867 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [241] [242] [243] Underfull \vbox (badness 10000) has occurred while \output is active [244] [245] [246] [247] [248] [249] [250] Underfull \vbox (badness 10000) has occurred while \output is active [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] Underfull \hbox (badness 1478) in paragraph at lines 18315--18318 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [261] [262] [263] [264] Underfull \hbox (badness 10000) in paragraph at lines 18587--18589 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 18593--18602 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [265] [266] [267] [268] [269] [270] [271] [272] Underfull \hbox (badness 1442) in paragraph at lines 19201--19203 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [273] [274] [275] [276] [277] Underfull \hbox (badness 10000) in paragraph at lines 19532--19538 [278] [279] [280] Underfull \hbox (badness 1248) in paragraph at lines 19777--19780 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [281] [282] [283] [284] [285] Underfull \hbox (badness 4739) in paragraph at lines 20040--20042 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [286] [287] [288] Underfull \hbox (badness 1603) in paragraph at lines 20267--20270 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [289] [290] [291] [292] [293] [294] [295] [296] [297] [298] [299] [300] [301] Underfull \hbox (badness 2469) in paragraph at lines 21124--21129 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [302] Underfull \hbox (badness 1675) in paragraph at lines 21212--21221 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21222--21237 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [303] Underfull \hbox (badness 10000) in paragraph at lines 21272--21275 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21272--21275 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [304] [305] Underfull \hbox (badness 1014) in paragraph at lines 21406--21411 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] [317] Underfull \hbox (badness 1264) in paragraph at lines 22255--22263 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [318] Underfull \hbox (badness 4441) in paragraph at lines 22289--22292 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] [329] Underfull \hbox (badness 5231) in paragraph at lines 23086--23088 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] [345] Underfull \hbox (badness 10000) in paragraph at lines 24179--24185 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24179--24185 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [346] [347] [348] [349] [350] [351] [352] Underfull \hbox (badness 2790) in paragraph at lines 24676--24679 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 24676--24679 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [353] [354] [355] [356] [357] Underfull \hbox (badness 1194) in paragraph at lines 24999--25002 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [358] [359] [360] Underfull \hbox (badness 2368) in paragraph at lines 25206--25212 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [361] [362] [363] [364] [365] Underfull \hbox (badness 10000) in paragraph at lines 25596--25599 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [366] [367] [368] [369] [370] [371] [372] [373] [374] Underfull \hbox (badness 10000) in paragraph at lines 26217--26219 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 1881) in paragraph at lines 27112--27115 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27137--27139 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [388] [389] Underfull \hbox (badness 2142) in paragraph at lines 27278--27282 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27335--27340 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [390] [391] [392] Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by [393] Underfull \hbox (badness 10000) in paragraph at lines 27642--27645 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 27668--27670 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 27710--27715 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 27716--27727 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 27716--27727 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 27728--27731 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [394] [395] [396] [397] [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] Underfull \hbox (badness 10000) in paragraph at lines 28128--28132 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [400] [401] Underfull \hbox (badness 10000) in paragraph at lines 28275--28278 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [402] Underfull \hbox (badness 7925) in paragraph at lines 28356--28360 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28356--28360 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28361--28370 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [403] [404] [405] [406] [407] [408] [409] [410] [411] [412] [413] [414] [415] [416] Underfull \hbox (badness 2726) in paragraph at lines 29357--29360 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] Underfull \hbox (badness 1603) in paragraph at lines 30107--30110 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [429] [430] [431] [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] [437] [438] [439] [440] [441] [442] Underfull \hbox (badness 1533) in paragraph at lines 31144--31147 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [443] [444] Underfull \hbox (badness 1163) in paragraph at lines 31307--31318 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [445] [446] [447] [448] [449] [450] [451] [452] [453] [454] [455] Underfull \vbox (badness 10000) has occurred while \output is active [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] Underfull \hbox (badness 10000) in paragraph at lines 32971--32975 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 32971--32975 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. [469] Underfull \hbox (badness 3557) in paragraph at lines 32992--32994 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 32995--32999 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [470] [471] [472] [473] [474] [475] [476] [477] Underfull \hbox (badness 1655) in paragraph at lines 33589--33591 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [478] [479] [480] [481] [482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493] [494] [495] Underfull \hbox (badness 2261) in paragraph at lines 34795--34800 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] [510] Underfull \hbox (badness 10000) in paragraph at lines 35915--35926 \T1/zi4/m/n/10 / / docs . microsoft . com / en-[]us / cpp / c-[]language / pars ing-[]c-[]command-[]line-[]arguments ? [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] [532] Underfull \hbox (badness 10000) in paragraph at lines 37446--37448 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [533] [534] [535] [536] [537] [538] Underfull \hbox (badness 2913) in paragraph at lines 37866--37870 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [539] [540] [541] Underfull \hbox (badness 1072) in paragraph at lines 38112--38116 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38117--38121 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [542] Underfull \hbox (badness 10000) in paragraph at lines 38157--38163 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38157--38163 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38157--38163 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38172--38179 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [543] [544] [545] Underfull \hbox (badness 2644) in paragraph at lines 38407--38411 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [546] [547] Underfull \hbox (badness 1142) in paragraph at lines 38560--38566 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [548] [549] [550] [551] [552] [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] Underfull \hbox (badness 1158) in paragraph at lines 39866--39868 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [567] [568] [569] [570] [571] [572] [573] [574] [575] Underfull \hbox (badness 1137) in paragraph at lines 40457--40463 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails [576] Underfull \hbox (badness 4967) in paragraph at lines 40476--40481 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [577] Underfull \hbox (badness 1616) in paragraph at lines 40596--40601 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [578] [579] [580] [581] [582] [583] [584] [585] [586] Underfull \hbox (badness 1472) in paragraph at lines 41143--41146 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [587] [588] [589] [590] [591] [592] [593] [594] [595] [596] [597] [598] [599] Underfull \hbox (badness 10000) in paragraph at lines 42069--42073 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [600] [601] [602] [603] Underfull \hbox (badness 10000) in paragraph at lines 42320--42323 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [604] [605] [606] Underfull \hbox (badness 10000) in paragraph at lines 42504--42508 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [607] [608] [609] [610] [611] [612] [613] [614] Underfull \hbox (badness 10000) in paragraph at lines 43143--43146 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626] [627] Underfull \hbox (badness 1990) in paragraph at lines 44065--44073 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 44065--44073 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638] [639] [640] [641] Underfull \hbox (badness 2452) in paragraph at lines 45034--45040 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [642] [643] [644] [645] [646] [647] Underfull \hbox (badness 3668) in paragraph at lines 45432--45434 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [648] Underfull \hbox (badness 2401) in paragraph at lines 45562--45566 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [649] [650] [651] [652] Underfull \hbox (badness 2111) in paragraph at lines 45770--45775 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [653] [654] [655] Underfull \hbox (badness 4001) in paragraph at lines 46016--46018 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [656] [657] [658] [659] [660] Underfull \hbox (badness 5417) in paragraph at lines 46381--46385 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [661] Underfull \hbox (badness 10000) in paragraph at lines 46442--46446 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [662]) (./compiler-pkg.tex Chapter 2. [663] [664] [665] [666]) (./datasets-pkg.tex Chapter 3. [667] [668] [669] [670] [671] [672] Underfull \vbox (badness 1472) has occurred while \output is active [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Overfull \vbox (4.26088pt too high) has occurred while \output is active [704] [705] [706] [707] [708] [709] Overfull \vbox (13.87083pt too high) has occurred while \output is active [710] Underfull \vbox (badness 2376) has occurred while \output is active [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] Overfull \vbox (10.49593pt too high) has occurred while \output is active [727] Overfull \vbox (15.49593pt too high) has occurred while \output is active [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742]) (./grDevices-pkg.tex Chapter 4. [743] [744] [745] [746] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [747] [748] [749] [750] [751] [752] [753] [754] [755] Underfull \hbox (badness 1424) in paragraph at lines 898--900 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [756] [757] [758] [759] [760] Underfull \hbox (badness 5175) in paragraph at lines 1192--1194 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [761] [762] Underfull \hbox (badness 2512) in paragraph at lines 1311--1313 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [763] [764] [765] [766] Underfull \hbox (badness 1490) in paragraph at lines 1611--1616 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1624--1628 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [767] [768] [769] [770] [771] [772] Underfull \hbox (badness 1325) in paragraph at lines 2038--2048 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [773] [774] Underfull \hbox (badness 10000) in paragraph at lines 2150--2152 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [775] [776] Underfull \hbox (badness 6758) in paragraph at lines 2329--2332 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [777] [778] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] [782] [783] [784] [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2940--2941 Underfull \vbox (badness 10000) has occurred while \output is active [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] Underfull \vbox (badness 10000) has occurred while \output is active [802] Underfull \hbox (badness 10000) in paragraph at lines 4016--4019 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] Underfull \vbox (badness 10000) has occurred while \output is active [814] [815] Underfull \hbox (badness 1584) in paragraph at lines 4910--4912 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 4914--4921 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [816] [817] [818] [819] Underfull \hbox (badness 1377) in paragraph at lines 5220--5225 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [820] Underfull \hbox (badness 1418) in paragraph at lines 5296--5303 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5314--5316 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [821] Underfull \hbox (badness 1377) in paragraph at lines 5425--5430 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [822] Underfull \hbox (badness 7344) in paragraph at lines 5494--5496 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [823] [824] Underfull \hbox (badness 2035) in paragraph at lines 5632--5641 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5632--5641 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5632--5641 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [825] [826] Underfull \hbox (badness 10000) in paragraph at lines 5700--5702 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / [827] [828] Underfull \hbox (badness 1546) in paragraph at lines 5844--5852 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] [836] Underfull \hbox (badness 10000) in paragraph at lines 6382--6385 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [837] [838] [839] [840] [841] [842] [843] [844] [845] [846] [847] [848] Underfull \hbox (badness 1189) in paragraph at lines 7211--7213 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [849] Underfull \hbox (badness 10000) in paragraph at lines 7316--7318 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [850] [851] [852] [853] [854] Underfull \hbox (badness 3780) in paragraph at lines 7630--7636 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [855] [856] [857] [858] [859]) (./graphics-pkg.tex [860] Chapter 5. [861] [862] [863] [864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875] Overfull \hbox (12.71341pt too wide) in paragraph at lines 983--983 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] Underfull \hbox (badness 4634) in paragraph at lines 1357--1360 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [882] [883] [884] [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] Underfull \hbox (badness 1728) in paragraph at lines 2335--2337 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [897] Underfull \hbox (badness 1009) in paragraph at lines 2428--2435 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] Underfull \vbox (badness 10000) has occurred while \output is active [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] Underfull \hbox (badness 3229) in paragraph at lines 4652--4657 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [932] [933] [934] [935] [936] Underfull \hbox (badness 1107) in paragraph at lines 5081--5087 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [937] Underfull \hbox (badness 10000) in paragraph at lines 5210--5213 [938] Underfull \hbox (badness 10000) in paragraph at lines 5271--5273 [939 ] [940 ] [941] [942] [943] [944] [945] [946] [947] [948]pdfTeX warning (ext4): destinati on with the same identifier (name{Rfn.plot}) has been already used, duplicate i gnored \relax l.5943 \aliasA{plot}{plot.default}{plot} [949] [950] [951] [952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6848--6849 [][] [963 ] [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] Underfull \hbox (badness 4954) in paragraph at lines 8936--8938 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 8938--8940 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [995]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.unit s}) has been already used, duplicate ignored \relax l.9018 \HeaderA{units}{Graphical Units}{units} [996] [997] [998] [999]) (./grid-pkg.tex [1000] Chapter 6. [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1019] Underfull \vbox (badness 10000) has occurred while \output is active [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) in paragraph at lines 3041--3043 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] Underfull \vbox (badness 10000) has occurred while \output is active [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] Underfull \hbox (badness 1067) in paragraph at lines 4761--4764 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1075] [1076] [1077] [1078] [1079] [1080] Underfull \hbox (badness 7256) in paragraph at lines 5112--5114 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \hbox (badness 2142) in paragraph at lines 5561--5565 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1088] Underfull \hbox (badness 4699) in paragraph at lines 5632--5637 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118]) (./methods-pkg.tex Chapter 7. [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] Underfull \vbox (badness 10000) has occurred while \output is active [1127] Underfull \vbox (badness 10000) has occurred while \output is active [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1145] [1146] [1147] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1153] [1154] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1155] [1156] [1157] [1158] [1159] [1160] [1161] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1162] [1163] [1164] [1165] [1166] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1169] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1178] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] Underfull \vbox (badness 10000) has occurred while \output is active [1187] Underfull \vbox (badness 10000) has occurred while \output is active [1188] [1189] [1190] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1191] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1192] [1193] [1194] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1203] [1204] [1205] [1206] Underfull \vbox (badness 10000) has occurred while \output is active [1207] [1208] [1209]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1210] [1211] [1212]pdfTeX warning (ext4): desti nation with the same identifier (name{Rfn.Complex}) has been already used, dupl icate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destinat ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) has been already used, duplicate igno red \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination wi th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor ed \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1213] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1214] [1215] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1256] [1257] [1258]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1259] [1260] [1261] [1262] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] Underfull \hbox (badness 3386) in paragraph at lines 1402--1405 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1279] [1280] [1281]) (./splines-pkg.tex [1282] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] [1295] [1296]) (./stats-pkg.tex Chapter 10. [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] Underfull \hbox (badness 1412) in paragraph at lines 887--889 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1310] [1311] [1312] [1313] [1314] [1315] [1316] Underfull \hbox (badness 2503) in paragraph at lines 1369--1372 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] Underfull \hbox (badness 2503) in paragraph at lines 3530--3533 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1349] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3642. [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] Underfull \hbox (badness 3989) in paragraph at lines 4787--4794 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2556) in paragraph at lines 5424--5427 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1377] [1378] [1379] [1380] [1381] [1382] Underfull \hbox (badness 2503) in paragraph at lines 5838--5842 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] Underfull \hbox (badness 7081) in paragraph at lines 6632--6635 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6636--6638 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1395] Underfull \vbox (badness 10000) has occurred while \output is active [1396] [1397] [1398] [1399] Underfull \vbox (badness 10000) has occurred while \output is active [1400] [1401] [1402] [1403] [1404] [1405] [1406] Underfull \hbox (badness 10000) in paragraph at lines 7493--7496 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428] [1429] [1430] [1431] [1432] Underfull \hbox (badness 2626) in paragraph at lines 9185--9188 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1433] [1434] Underfull \hbox (badness 2503) in paragraph at lines 9292--9296 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] Underfull \hbox (badness 4518) in paragraph at lines 10644--10649 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1454] [1455] [1456] [1457] [1458] Underfull \hbox (badness 2142) in paragraph at lines 11005--11008 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11024--11027 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1459] Underfull \hbox (badness 1708) in paragraph at lines 11086--11090 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1460] [1461] [1462] [1463] [1464] Underfull \hbox (badness 1694) in paragraph at lines 11482--11485 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.hat}) has been already used, dupl icate ignored \relax l.11963 \aliasA{hat}{influence.measures}{hat} [1473] [1474] Underfull \hbox (badness 1484) in paragraph at lines 12105--12107 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] Underfull \hbox (badness 10000) in paragraph at lines 12707--12709 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1484] [1485] [1486] [1487] [1488] Underfull \hbox (badness 2894) in paragraph at lines 13043--13047 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1489] [1490] [1491] [1492] [1493] [1494] Underfull \hbox (badness 1496) in paragraph at lines 13457--13463 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1495] [1496] [1497] [1498] [1499] [1500] Underfull \hbox (badness 4518) in paragraph at lines 13855--13860 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] Underfull \hbox (badness 4518) in paragraph at lines 14522--14527 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1511] [1512] Underfull \hbox (badness 6412) in paragraph at lines 14660--14664 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14667--14669 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] [1528] Underfull \hbox (badness 2503) in paragraph at lines 15743--15747 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1529] [1530] [1531] [1532] [1533] [1534] [1535] Underfull \hbox (badness 10000) in paragraph at lines 16253--16259 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16253--16259 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 1158) in paragraph at lines 17906--17909 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1561] [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1377) in paragraph at lines 18933--18938 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on [1576] Underfull \hbox (badness 1735) in paragraph at lines 18938--18941 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18951--18955 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18951--18955 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 18959--18963 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1577] [1578] [1579] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19184--19184 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19187--19187 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1580] [1581] [1582] [1583] [1584] [1585] [1586] Underfull \hbox (badness 1337) in paragraph at lines 19646--19649 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1587] [1588] [1589] [1590] [1591] [1592] [1593] [1594] Underfull \hbox (badness 10000) in paragraph at lines 20117--20123 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1595] [1596] [1597] [1598] [1599] Underfull \hbox (badness 1194) in paragraph at lines 20447--20450 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1600] [1601] [1602] [1603] [1604] [1605] Underfull \hbox (badness 2503) in paragraph at lines 20826--20829 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1606] Underfull \hbox (badness 3919) in paragraph at lines 20853--20855 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1607] [1608] [1609] [1610] [1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 10000) in paragraph at lines 21932--21938 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] Underfull \hbox (badness 1337) in paragraph at lines 23289--23295 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1644] [1645] [1646] [1647] [1648] [1649] [1650] Underfull \hbox (badness 1436) in paragraph at lines 23714--23717 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1651] [1652] Underfull \hbox (badness 10000) in paragraph at lines 23855--23856 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] [1666] Underfull \hbox (badness 1824) in paragraph at lines 24827--24833 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24827--24833 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 24848--24851 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675] Underfull \hbox (badness 2165) in paragraph at lines 25429--25434 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1676] [1677] [1678] [1679] Underfull \hbox (badness 1867) in paragraph at lines 25638--25640 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25653--25657 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \hbox (badness 3514) in paragraph at lines 27301--27306 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1704] [1705] [1706] [1707] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27535--27535 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1708] Underfull \hbox (badness 3514) in paragraph at lines 27571--27577 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1709] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27628--27628 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27630--27630 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1710] [1711] Underfull \hbox (badness 3514) in paragraph at lines 27804--27809 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1712] [1713] Underfull \hbox (badness 3514) in paragraph at lines 27891--27896 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1714] Underfull \hbox (badness 3514) in paragraph at lines 27956--27961 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1715] Underfull \hbox (badness 3514) in paragraph at lines 28050--28055 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1716] [1717] Underfull \hbox (badness 6691) in paragraph at lines 28142--28147 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] Underfull \hbox (badness 4024) in paragraph at lines 28633--28636 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] Underfull \hbox (badness 5431) in paragraph at lines 29239--29241 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1735] [1736] [1737] [1738] Underfull \hbox (badness 5431) in paragraph at lines 29449--29452 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1739] [1740] [1741] [1742] [1743] Underfull \hbox (badness 1337) in paragraph at lines 29764--29768 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1744] [1745] [1746] [1747] Underfull \hbox (badness 1616) in paragraph at lines 30082--30085 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1748] [1749] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] [1765] Underfull \hbox (badness 3557) in paragraph at lines 31217--31221 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1766] [1767] Underfull \vbox (badness 10000) has occurred while \output is active [1768] [1769] [1770] Underfull \hbox (badness 1337) in paragraph at lines 31581--31585 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1771] [1772] [1773] [1774] [1775] [1776] [1777] [1778] Underfull \hbox (badness 1337) in paragraph at lines 32110--32114 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1779] [1780] [1781] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32317--32317 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1782] [1783] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32478--32478 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1784] [1785] [1786] [1787] [1788]) (./stats4-pkg.tex Chapter 11. [1789] [1790] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] [1793] [1794] [1795] [1796]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.show.Rdash.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1797] [1798] [1799]) (./tcltk-pkg.tex [1800] Chapter 12. [1801] [1802] [1803] [1804] [1805] [1806] [1807] Underfull \vbox (badness 10000) has occurred while \output is active [1808] Underfull \hbox (badness 1546) in paragraph at lines 666--673 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820]) (./tools-pkg.tex Chapter 13. [1821] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1822] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1823] [1824] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1825] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1826] [1827] Underfull \hbox (badness 1142) in paragraph at lines 463--467 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1828] [1829] [1830] [1831] [1832] Overfull \vbox (7.18602pt too high) has occurred while \output is active [1833] [1834] [1835] [1836] [1837] [1838] Underfull \hbox (badness 1014) in paragraph at lines 1174--1176 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1180--1182 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous Underfull \hbox (badness 10000) in paragraph at lines 1217--1220 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1217--1220 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1839] [1840] [1841] [1842] [1843] Underfull \hbox (badness 2293) in paragraph at lines 1569--1571 []\T1/zi4/m/n/10 CRAN_memtest_notes() []\T1/ptm/m/n/10 is now dep-re-cated, wit h its func-tion-al-ity in-te-grated into that of [1844] Underfull \hbox (badness 10000) in paragraph at lines 1595--1598 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1845] [1846] Underfull \hbox (badness 4096) in paragraph at lines 1714--1722 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1724--1726 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1847] [1848] [1849]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1926 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ig nored \relax l.1927 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1850] [1851] [1852] [1853] Overfull \hbox (8.25941pt too wide) in paragraph at lines 2230--2230 [] \T1/zi4/m/n/9 r"(\newcommand{\Rlogo}{\if{html}{\figure{Rlogo.svg}{option s: width=100 alt="R logo"}})",[] [1854] [1855] [1856] Underfull \hbox (badness 4096) in paragraph at lines 2399--2407 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1857] [1858] [1859] [1860] [1861] [1862] [1863] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2894. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2894. [1864] [1865] [1866] [1867] Underfull \hbox (badness 1424) in paragraph at lines 3196--3198 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] Underfull \hbox (badness 10000) in paragraph at lines 3902--3904 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 4041--4044 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1881] [1882] [1883] [1884] [1885] Underfull \hbox (badness 1796) in paragraph at lines 4399--4404 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1886] Underfull \hbox (badness 4699) in paragraph at lines 4449--4453 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4449--4453 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from Underfull \hbox (badness 1838) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4477--4483 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1887] [1888] [1889] [1890] Underfull \hbox (badness 2197) in paragraph at lines 4750--4760 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1891] Underfull \hbox (badness 1571) in paragraph at lines 4816--4820 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1892] [1893] [1894] [1895]) (./utils-pkg.tex [1896] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] Underfull \hbox (badness 10000) in paragraph at lines 726--732 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 726--732 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1907] [1908] [1909] Underfull \hbox (badness 3861) in paragraph at lines 931--936 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1910] [1911] [1912] Underfull \hbox (badness 3323) in paragraph at lines 1115--1123 []\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use []\T1/zi4/m/it /10 bibtex = T|F []\T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m $\T1/ptm/m/n/10 , in-di-cat- Underfull \hbox (badness 2961) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f or-mat- Underfull \hbox (badness 3919) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is Underfull \hbox (badness 2875) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 taken as [][][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex. max", 1) []\T1/ptm/m/n/10 which is []\T1/zi4/m/it/10 1 []\T1/ptm/m/n/10 typ-i-c ally. Underfull \hbox (badness 1817) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f ault by Underfull \hbox (badness 10000) in paragraph at lines 1127--1129 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 1371) in paragraph at lines 1638--1640 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1920] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1708. [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 2057) in paragraph at lines 2359--2361 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1930] [1931] [1932] [1933] [1934]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.clipboard}) has been already used, duplicate ignored \relax l.2711 ... the Clipboard in MS Windows}{clipboard} [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] Underfull \hbox (badness 6842) in paragraph at lines 4010--4015 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1954] Underfull \hbox (badness 1430) in paragraph at lines 4073--4077 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1955] Underfull \hbox (badness 1184) in paragraph at lines 4144--4160 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/it/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4144--4160 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/it/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4144--4160 \T1/ptm/m/n/10 able []\T1/zi4/m/it/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1956] [1957] Underfull \hbox (badness 10000) in paragraph at lines 4285--4287 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968]pdf TeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5054 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.format.1}) has been already used, dupl icate ignored \relax l.5054 ...mat Unordered and Ordered Lists}{format} [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 1622) in paragraph at lines 5577--5581 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [1977] [1978] [1979] [1980] [1981] [1982] Underfull \hbox (badness 1448) in paragraph at lines 5956--5961 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [1983] [1984] [1985] [1986] [1987] [1988] [1989] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6502. [1990] Underfull \hbox (badness 1371) in paragraph at lines 6506--6508 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1991] Underfull \hbox (badness 1502) in paragraph at lines 6595--6600 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6595--6600 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [1992] [1993] Underfull \hbox (badness 10000) in paragraph at lines 6768--6777 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [1994] Underfull \hbox (badness 2150) in paragraph at lines 6832--6835 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [1995] [1996] Underfull \hbox (badness 3118) in paragraph at lines 6971--6973 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [1997] [1998] Underfull \hbox (badness 1325) in paragraph at lines 7150--7154 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [1999] Underfull \hbox (badness 1424) in paragraph at lines 7242--7245 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2000] Underfull \hbox (badness 3219) in paragraph at lines 7313--7320 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7313--7320 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7313--7320 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7313--7320 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7321--7324 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2001] [2002] Underfull \hbox (badness 1024) in paragraph at lines 7448--7451 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7481--7486 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013] Underfull \hbox (badness 10000) in paragraph at lines 8185--8187 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2014] [2015] [2016] [2017] [2018] [2019] [2020] [2021] [2022] [2023] [2024] [2025] Underfull \hbox (badness 2310) in paragraph at lines 8945--8950 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2026] [2027] [2028] [2029] [2030] [2031] [2032] Underfull \hbox (badness 1248) in paragraph at lines 9471--9475 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2033] Underfull \hbox (badness 1789) in paragraph at lines 9551--9553 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2034] [2035] [2036] [2037] [2038] [2039] [2040] [2041] [2042] Underfull \vbox (badness 5533) has occurred while \output is active [2043] [2044] [2045] Underfull \hbox (badness 1097) in paragraph at lines 10388--10391 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2046] [2047] Underfull \hbox (badness 3000) in paragraph at lines 10524--10529 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 2134) in paragraph at lines 11113--11118 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2056] Underfull \hbox (badness 10000) in paragraph at lines 11169--11174 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11169--11174 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \hbox (badness 2469) in paragraph at lines 11663--11667 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11663--11667 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 4060) in paragraph at lines 12087--12090 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2070] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12110--12110 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2071] [2072] [2073] Underfull \hbox (badness 2150) in paragraph at lines 12365--12367 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2074] [2075] [2076] [2077] Underfull \hbox (badness 10000) in paragraph at lines 12585--12589 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12618--12624 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12633--12641 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2078] [2079] Underfull \hbox (badness 1009) in paragraph at lines 12812--12824 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If [2080] Underfull \hbox (badness 4779) in paragraph at lines 12852--12854 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 12882--12889 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2081] [2082] [2083] [2084] [2085] [2086] Underfull \hbox (badness 3780) in paragraph at lines 13290--13294 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13306--13309 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2087] [2088] [2089] Underfull \hbox (badness 2302) in paragraph at lines 13511--13513 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2090] [2091] [2092] [2093] [2094] Underfull \hbox (badness 10000) in paragraph at lines 13810--13815 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/it/10 deparse[][][](control = ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 13819--13822 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2095] [2096] [2097] [2098] [2099] [2100] [2101] Underfull \hbox (badness 2932) in paragraph at lines 14252--14259 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14252--14259 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/it/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2102] [2103] Underfull \hbox (badness 1460) in paragraph at lines 14417--14425 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2104] [2105] Underfull \hbox (badness 6510) in paragraph at lines 14567--14571 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14574--14577 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14574--14577 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2106] [2107] [2108] [2109] [2110] [2111] [2112] [2113] [2114] Underfull \hbox (badness 10000) in paragraph at lines 15243--15248 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15243--15248 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15249--15251 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2115] Underfull \hbox (badness 10000) in paragraph at lines 15308--15311 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129] [2130]) [2131] [2132] (./KernSmooth-pkg.tex Chapter 15. [2133] [2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]) (./MASS-pkg.tex Chapter 16. [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] Underfull \hbox (badness 10000) in paragraph at lines 2871--2876 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2183] [2184] Underfull \hbox (badness 4686) in paragraph at lines 3039--3041 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] [2209] Underfull \hbox (badness 1117) in paragraph at lines 4810--4813 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2210] Underfull \hbox (badness 1117) in paragraph at lines 4888--4891 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6151 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.npk.1}) has been already used, duplica te ignored \relax l.6151 ...sical N, P, K Factorial Experiment}{npk} [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 1117) in paragraph at lines 7122--7129 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2241] Underfull \hbox (badness 3138) in paragraph at lines 7193--7199 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2242] [2243] [2244] Underfull \hbox (badness 1910) in paragraph at lines 7372--7375 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] Underfull \hbox (badness 4686) in paragraph at lines 8005--8007 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2291] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 5119) in paragraph at lines 488--492 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2297] Underfull \hbox (badness 2035) in paragraph at lines 584--587 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2298] [2299] [2300] [2301] Underfull \hbox (badness 1521) in paragraph at lines 860--865 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 860--865 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 860--865 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2302] [2303] Underfull \hbox (badness 10000) in paragraph at lines 1042--1044 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2304] [2305]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.chol}) has been already used, duplicate ignored \relax l.1154 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.chol.1}) has been already used, duplic ate ignored \relax l.1154 ...- 'Matrix' S4 Generic and Methods}{chol} [2306] [2307] [2308] Underfull \hbox (badness 2277) in paragraph at lines 1424--1427 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2309] [2310] [2311] Underfull \hbox (badness 1097) in paragraph at lines 1594--1597 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1600--1604 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.1657 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colSums.1}) has been already used, dup licate ignored \relax l.1657 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colMeans}) has been already used, dupl icate ignored \relax l.1658 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowMeans}) has been already used, duplicate i gnored \relax l.1681 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowSums}) has been already used, duplicate ig nored \relax l.1694 \aliasA{rowSums}{colSums}{rowSums} [2312] [2313pdfTeX warning (ext4): de stination with the same identifier (name{Rfn.rowMeans,diagonalMatrix.Rdash.meth od}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1773 ...), matrix(1:3, 3,4), diag(3:2))) # 7 x 8 pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.rowSums,diagonalMatrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1773 ...), matrix(1:3, 3,4), diag(3:2))) # 7 x 8 ] [2314] [2315] Underfull \hbox (badness 3547) in paragraph at lines 1915--1918 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2316] [2317] [2318] [2319] Underfull \hbox (badness 1983) in paragraph at lines 2337--2345 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/it/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2320] [2321] [2322] [2323] Underfull \hbox (badness 2717) in paragraph at lines 2726--2730 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2324] [2325] Underfull \hbox (badness 6842) in paragraph at lines 2816--2819 []\T1/zi4/m/it/10 Diagonal() []\T1/ptm/m/n/10 re-turns an ob-ject of class [][] []\T1/zi4/m/it/10 ddiMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 ldi Matrix[][][] []\T1/ptm/m/n/10 (with ``su-per-class'' [2326] Underfull \hbox (badness 8019) in paragraph at lines 2957--2959 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 2960--2964 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2327pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coer ce,diagonalMatrix,nMatrix.Rdash.method}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.2980 ] [2328] [2329] Underfull \hbox (badness 1902) in paragraph at lines 3213--3215 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2330] Underfull \hbox (badness 2020) in paragraph at lines 3247--3250 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2331] [2332] Underfull \hbox (badness 4378) in paragraph at lines 3451--3460 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/it/10 selectMethod("coerce", c(from="dsyMat rix", [2333] Underfull \hbox (badness 1354) in paragraph at lines 3519--3522 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2334] [2335] [2336] [2337] [2338] Underfull \hbox (badness 4518) in paragraph at lines 3935--3938 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 3938--3941 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2339] [2340] Underfull \hbox (badness 2318) in paragraph at lines 4062--4066 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2341] Underfull \hbox (badness 3240) in paragraph at lines 4193--4197 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2342] [2343] [2344pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coerce,dtrMatrix,dgeMatrix.Rdash.method}) has been already used, dupl icate ignored ...shipout:D \box_use:N \l_shipout_box l.4350 \item[\code{x}:] Object of class \code{"numeric"}. The numeric] [2345] [2346] [2347] [2348] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4635--4635 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4642--4642 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2349] [2350] [2351] Underfull \hbox (badness 1931) in paragraph at lines 4848--4850 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2352] [2353] [2354] [2355] Underfull \hbox (badness 1005) in paragraph at lines 5151--5156 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5151--5156 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 5170--5173 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2356] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5219--5219 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2357] Underfull \hbox (badness 3229) in paragraph at lines 5326--5335 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the [2358] Underfull \hbox (badness 10000) in paragraph at lines 5368--5370 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5373--5376 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low Underfull \hbox (badness 10000) in paragraph at lines 5383--5386 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2359] [2360] [2361] [2362] [2363] Overfull \hbox (26.39984pt too wide) in paragraph at lines 5776--5776 []\T1/zi4/m/it/10 isSymmetric(object, tol = 100 * .Machine$double.eps, tol1 = 8 * tol, checkDN = TRUE, ...)[] [2364] [2365] [2366] [2367] [2368] [2369] [2370] Underfull \hbox (badness 2478) in paragraph at lines 6402--6407 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 6410--6413 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2371] [2372] [2373] Underfull \hbox (badness 10000) in paragraph at lines 6751--6754 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2374] Underfull \hbox (badness 10000) in paragraph at lines 6830--6833 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2375] Underfull \hbox (badness 2050) in paragraph at lines 6929--6932 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2376] [2377] [2378] [2379] [2380] [2381]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7358 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7449--7451 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode [2382pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coer ce,Matrix,denseMatrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.7454 \item[image] \code{signature(object = "Matrix")}: draws an] Underfull \hbox (badness 4846) in paragraph at lines 7454--7457 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7459--7462 [2383]pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rp cent.*.Rpcent.}) has been already used, duplicate ignored \relax l.7532 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.crossprod}) has been already used, dup licate ignored \relax l.7629 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.tcrossprod}) has been already used, du plicate ignored \relax l.7723 ...tcrossprod}{matrix-products}{tcrossprod} [2384] Underfull \hbox (badness 10000) in paragraph at lines 7892--7897 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7892--7897 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7901--7903 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7903--7905 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2385] [2386] Underfull \hbox (badness 1430) in paragraph at lines 8054--8059 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2387] [2388] Underfull \hbox (badness 10000) in paragraph at lines 8177--8179 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2389] [2390] Underfull \vbox (badness 10000) has occurred while \output is active [2391] Underfull \hbox (badness 2478) in paragraph at lines 8386--8391 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8394--8397 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2392] [2393] Underfull \hbox (badness 5924) in paragraph at lines 8586--8588 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2394]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.nor m}) has been already used, duplicate ignored \relax l.8626 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignor ed \relax l.8626 \HeaderA{norm}{Matrix Norms}{norm} [2395] [2396] [2397] Underfull \hbox (badness 10000) in paragraph at lines 9036--9039 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2398] Underfull \hbox (badness 10000) in paragraph at lines 9118--9121 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2399] [2400] Underfull \hbox (badness 4242) in paragraph at lines 9253--9256 [][][]\T1/zi4/m/it/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/it/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2401] [2402] Underfull \hbox (badness 10000) in paragraph at lines 9332--9334 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2403] [2404] [2405]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9569 \aliasA{qr}{qr-methods}{qr} [2406] [2407] [2408] Underfull \hbox (badness 7186) in paragraph at lines 9736--9742 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2409] [2410]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.rcond}) has been already used, duplicate ignored \relax l.9893 ... the Reciprocal Condition Number}{rcond} [2411] [2412] [2413] [2414] Underfull \hbox (badness 2351) in paragraph at lines 10202--10210 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 10202--10210 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2415] [2416] [2417] [2418]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.solve}) has been already used, duplicate ignored \relax l.10470 \aliasA{solve}{solve-methods}{solve} [2419] [2420] Underfull \hbox (badness 4403) in paragraph at lines 10706--10709 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2421] Underfull \hbox (badness 10000) in paragraph at lines 10776--10779 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10812--10815 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10823--10827 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2422] [2423] [2424] [2425] [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \hbox (badness 10000) in paragraph at lines 11395--11403 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11395--11403 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11420--11428 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11420--11428 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2430]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr. Q}) has been already used, duplicate ignored \relax l.11486 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2431] [2432] Underfull \hbox (badness 5036) in paragraph at lines 11672--11674 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2433] [2434] Underfull \hbox (badness 2828) in paragraph at lines 11834--11837 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11856--11859 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2435] Underfull \vbox (badness 10000) has occurred while \output is active [2436] [2437] [2438] [2439] Underfull \hbox (badness 2057) in paragraph at lines 12207--12209 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2440] [2441] Underfull \hbox (badness 10000) in paragraph at lines 12381--12386 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12387--12393 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2442] Underfull \hbox (badness 1902) in paragraph at lines 12422--12426 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2443] [2444] [2445] [2446] [2447] [2448] [2449] [2450] Underfull \hbox (badness 6910) in paragraph at lines 13147--13149 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2451] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 13194. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 13194. [2452] [2453] [2454]) (./boot-pkg.tex Chapter 18. [2455] [2456] [2457] [2458] [2459] [2460] [2461] [2462] [2463] [2464] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2465] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2466] Underfull \vbox (badness 10000) has occurred while \output is active [2467] [2468] [2469] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2470] [2471] [2472] [2473] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2474] [2475] [2476] [2477] [2478] [2479] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2483] [2484] [2485] [2486] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2487] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2488] [2489] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2490] [2491] [2492] [2493] [2494] [2495] [2496] [2497] [2498] [2499] [2500] [2501] [2502] [2503] [2504] [2505] [2506] [2507] [2508] [2509] [2510] [2511] [2512] [2513] [2514] [2515] [2516] [2517] [2518] [2519] [2520] [2521] [2522] [2523] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2524] [2525] [2526] [2527] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2528] [2529] [2530] [2531] [2532] [2533] [2534] [2535] [2536] [2537] [2538] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2539] [2540] [2541] [2542] [2543] [2544] [2545] [2546] [2547] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2548] [2549] [2550] [2551] [2552] [2553] [2554] [2555] [2556] [2557]) (./class-pkg.tex [2558] Chapter 19. [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570] [2571] [2572] [2573] [2574]) (./cluster-pkg.tex Chapter 20. [2575] [2576] [2577] [2578] [2579] Underfull \vbox (badness 7777) has occurred while \output is active [2580] [2581] [2582] [2583] [2584] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2585] [2586] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2587] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2588] [2589] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2590] [2591] [2592] [2593] [2594] [2595] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2596] [2597] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2598] Underfull \hbox (badness 4954) in paragraph at lines 1686--1688 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/i t/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2599] Underfull \hbox (badness 7667) in paragraph at lines 1699--1703 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1699--1703 \T1/ptm/m/n/10 (incl []\T1/zi4/m/it/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/it/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/it/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2600] [2601] [2602] [2603] [2604] [2605] Underfull \hbox (badness 10000) in paragraph at lines 2207--2210 [2606] Underfull \hbox (badness 10000) in paragraph at lines 2221--2227 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2607] [2608] [2609] Underfull \hbox (badness 6675) in paragraph at lines 2456--2458 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2610] [2611] [2612] [2613] [2614] [2615] [2616] [2617] Underfull \hbox (badness 2980) in paragraph at lines 3051--3055 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2618] [2619] [2620] [2621] [2622] [2623] Underfull \hbox (badness 1142) in paragraph at lines 3392--3395 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2624] [2625] Underfull \hbox (badness 1142) in paragraph at lines 3511--3514 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2626] [2627] [2628] Underfull \hbox (badness 2582) in paragraph at lines 3734--3739 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2629] Underfull \hbox (badness 2698) in paragraph at lines 3796--3801 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3796--3801 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2630] [2631] [2632] [2633] [2634] Underfull \hbox (badness 10000) in paragraph at lines 4088--4090 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2635] [2636] [2637] [2638] Underfull \hbox (badness 2626) in paragraph at lines 4317--4322 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2639] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2640] [2641] [2642] [2643] [2644] [2645] [2646] Underfull \hbox (badness 10000) in paragraph at lines 4839--4841 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2647] [2648]) (./codetools-pkg.tex Chapter 21. [2649] [2650] [2651] [2652] [2653]) (./foreign-pkg.tex [2654] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2655] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2656] [2657] [2658] [2659] [2660] [2661] [2662] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, [2663] Overfull \hbox (6.73795pt too wide) in paragraph at lines 624--624 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2664] [2665] [2666] Underfull \hbox (badness 10000) in paragraph at lines 812--813 [2667] Underfull \hbox (badness 10000) in paragraph at lines 869--873 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2668] [2669] Underfull \hbox (badness 10000) in paragraph at lines 990--992 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2670] [2671] [2672] [2673] Underfull \hbox (badness 10000) in paragraph at lines 1270--1276 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2674] [2675]) (./lattice-pkg.tex [2676] Chapter 23. [2677] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2678] [2679] [2680] [2681] [2682] [2683] [2684] [2685] [2686] [2687] [2688] [2689] [2690] [2691] [2692] Underfull \hbox (badness 1062) in paragraph at lines 1398--1402 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2693] Underfull \vbox (badness 4416) has occurred while \output is active [2694] Underfull \hbox (badness 1803) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2695] [2696] [2697] Underfull \hbox (badness 3009) in paragraph at lines 1725--1727 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1755--1759 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2698] [2699] [2700] [2701] [2702] Underfull \hbox (badness 10000) in paragraph at lines 2141--2144 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2703] [2704] [2705] [2706] [2707] [2708] [2709] [2710] [2711] [2712] Underfull \hbox (badness 2781) in paragraph at lines 2849--2851 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2713] [2714] Underfull \hbox (badness 2486) in paragraph at lines 3001--3005 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2715] [2716] [2717] [2718] [2719] [2720]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.parallel}) has been already used, duplicate ign ored \relax l.3475 \aliasA{parallel}{B\_08\_splom}{parallel} [2721] [2722] [2723] [2724] [2725] [2726] [2727] [2728] Underfull \hbox (badness 5696) in paragraph at lines 3970--3974 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2729] Underfull \hbox (badness 1173) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in [2730] Underfull \hbox (badness 3219) in paragraph at lines 4136--4138 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2731] [2732] Underfull \hbox (badness 3492) in paragraph at lines 4336--4346 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , [2733] Underfull \hbox (badness 10000) in paragraph at lines 4361--4364 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4364--4366 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2734] [2735] [2736] [2737] [2738] [2739] [2740] [2741] [2742] Underfull \hbox (badness 6157) in paragraph at lines 5087--5090 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2743] [2744] [2745] [2746] [2747] [2748] [2749] Underfull \hbox (badness 10000) in paragraph at lines 5545--5548 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5545--5548 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2750] [2751] [2752] [2753] [2754] Underfull \hbox (badness 4805) in paragraph at lines 5907--5911 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 5918--5925 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 5918--5925 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 5918--5925 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2755] [2756] [2757] [2758] Underfull \hbox (badness 4242) in paragraph at lines 6218--6223 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6218--6223 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2759] [2760] Underfull \hbox (badness 2310) in paragraph at lines 6334--6339 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2761] [2762] [2763] [2764] [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \hbox (badness 3168) in paragraph at lines 7116--7120 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2772] [2773] [2774] [2775] Underfull \hbox (badness 2012) in paragraph at lines 7387--7390 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2776] [2777] Underfull \hbox (badness 3333) in paragraph at lines 7559--7561 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing [2778] [2779] [2780] Underfull \vbox (badness 10000) has occurred while \output is active [2781] [2782] [2783] Underfull \hbox (badness 1436) in paragraph at lines 7973--7979 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2784] [2785] [2786] [2787] [2788] [2789] [2790] [2791] Underfull \hbox (badness 10000) in paragraph at lines 8531--8534 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2792] Underfull \hbox (badness 1092) in paragraph at lines 8577--8579 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2793] [2794] Underfull \hbox (badness 3895) in paragraph at lines 8738--8741 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2795] Underfull \hbox (badness 1515) in paragraph at lines 8814--8818 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2796] [2797] Underfull \hbox (badness 6316) in paragraph at lines 8920--8925 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 8937--8940 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2798] [2799] [2800] [2801] Underfull \hbox (badness 1728) in paragraph at lines 9228--9232 []\T1/ptm/m/n/10 Returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2802] [2803] [2804] [2805] [2806] [2807] [2808] Underfull \hbox (badness 2310) in paragraph at lines 9692--9696 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9697--9700 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2809] [2810] [2811]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma}) has been already used, duplicate ignored \relax l.9923 \aliasA{melanoma}{H\_melanoma}{melanoma} [2812] [2813] [2814] Underfull \hbox (badness 4144) in paragraph at lines 10147--10150 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10147--10150 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2815] [2816]) (./mgcv-pkg.tex Chapter 24. [2817] [2818] [2819] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2820] [2821] [2822] [2823] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2824] [2825] [2826] [2827] [2828] [2829] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2830] [2831] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2832] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2833] Underfull \vbox (badness 10000) has occurred while \output is active [2834] [2835] [2836] [2837] [2838] [2839] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2840] [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] [2846] [2847] [2848] [2849] [2850] [2851] [2852] [2853] [2854] [2855] [2856] [2857] [2858] [2859] [2860] [2861] [2862] Underfull \hbox (badness 1142) in paragraph at lines 2592--2596 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 2618--2624 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2863] [2864] [2865] [2866] [2867] [2868] Underfull \vbox (badness 10000) has occurred while \output is active [2869] Underfull \vbox (badness 10000) has occurred while \output is active [2870] Underfull \vbox (badness 10000) has occurred while \output is active [2871] [2872] [2873] [2874] [2875] [2876] [2877] [2878] [2879] [2880] [2881] [2882] [2883] [2884] [2885] [2886] Underfull \hbox (badness 10000) in paragraph at lines 4063--4067 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2887] [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] Underfull \hbox (badness 1184) in paragraph at lines 4350--4354 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2892] [2893] [2894] [2895] [2896] [2897] [2898] [2899] [2900] [2901] [2902] [2903] Underfull \hbox (badness 1142) in paragraph at lines 5073--5077 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2904] Underfull \hbox (badness 1231) in paragraph at lines 5177--5179 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2905] [2906] [2907] Underfull \vbox (badness 10000) has occurred while \output is active [2908] [2909] [2910] [2911] Underfull \hbox (badness 2181) in paragraph at lines 5621--5622 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2912] [2913] [2914] [2915] [2916] [2917] [2918] Underfull \hbox (badness 10000) in paragraph at lines 6010--6011 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2919] [2920] [2921] [2922] [2923] [2924] [2925] [2926] [2927] [2928] [2929] Underfull \hbox (badness 1142) in paragraph at lines 6595--6599 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2930] [2931] [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] [2935] [2936] Underfull \hbox (badness 1087) in paragraph at lines 6967--6968 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2937] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939] Underfull \vbox (badness 10000) has occurred while \output is active [2940] [2941] [2942] [2943] [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] Underfull \hbox (badness 1242) in paragraph at lines 7916--7917 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2953] [2954] [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] Underfull \hbox (badness 6001) in paragraph at lines 8561--8563 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2964] [2965] [2966] [2967] [2968] [2969] [2970] [2971] [2972] [2973] Underfull \vbox (badness 10000) has occurred while \output is active [2974] [2975] Underfull \hbox (badness 1038) in paragraph at lines 9310--9313 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9310--9313 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [2976] Underfull \hbox (badness 10000) in paragraph at lines 9366--9369 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [2977] [2978] [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 1852) in paragraph at lines 10040--10043 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2988] [2989] [2990] Underfull \hbox (badness 1852) in paragraph at lines 10209--10212 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2991] [2992] Underfull \vbox (badness 10000) has occurred while \output is active [2993] [2994] Underfull \hbox (badness 1205) in paragraph at lines 10449--10451 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10449--10451 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10455--10460 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [2995] Underfull \hbox (badness 1205) in paragraph at lines 10539--10541 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10539--10541 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [2996] [2997] [2998] Underfull \hbox (badness 1253) in paragraph at lines 10738--10740 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [2999] [3000] [3001] [3002] [3003] [3004] Underfull \hbox (badness 4792) in paragraph at lines 10999--11002 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10999--11002 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3005] Underfull \hbox (badness 10000) in paragraph at lines 11106--11109 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [3006] [3007] [3008] [3009] [3010] [3011] [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] Underfull \hbox (badness 3861) in paragraph at lines 11898--11901 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3020] [3021] Underfull \hbox (badness 1320) in paragraph at lines 12013--12018 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3022] Underfull \hbox (badness 1975) in paragraph at lines 12119--12124 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3023] [3024] Underfull \hbox (badness 1762) in paragraph at lines 12208--12220 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3025] [3026] [3027] Underfull \hbox (badness 7667) in paragraph at lines 12420--12426 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3028] Underfull \hbox (badness 10000) in paragraph at lines 12461--12462 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3029] [3030] [3031] [3032] Underfull \vbox (badness 10000) has occurred while \output is active [3033] Underfull \hbox (badness 10000) in paragraph at lines 12738--12740 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3034] [3035] Underfull \hbox (badness 10000) in paragraph at lines 12868--12869 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3036] [3037] [3038] Underfull \hbox (badness 1436) in paragraph at lines 13004--13011 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3039] [3040] Underfull \hbox (badness 10000) in paragraph at lines 13103--13104 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3041] [3042] [3043] [3044] [3045] [3046] [3047] [3048] [3049] [3050] Underfull \hbox (badness 10000) in paragraph at lines 13704--13710 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13704--13710 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3051] [3052] [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] Underfull \vbox (badness 10000) has occurred while \output is active [3055] [3056] Underfull \hbox (badness 10000) in paragraph at lines 14047--14048 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3057] [3058] [3059] [3060] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14259--14259 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3061] [3062] Underfull \hbox (badness 3895) in paragraph at lines 14405--14408 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3063] Underfull \hbox (badness 10000) in paragraph at lines 14450--14452 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3064] [3065] [3066] [3067] [3068] Underfull \hbox (badness 1371) in paragraph at lines 14730--14736 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14741--14743 []\T1/zi4/m/it/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14741--14743 [][][]\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3069] Underfull \hbox (badness 10000) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3070] [3071] [3072] [3073] Underfull \hbox (badness 2326) in paragraph at lines 14976--14983 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3074] Underfull \hbox (badness 2158) in paragraph at lines 15061--15061 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3075] [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] [3091] [3092] [3093] [3094] [3095] [3096] [3097] [3098] [3099] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16623--16623 []\T1/zi4/m/it/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3100] [3101] Underfull \hbox (badness 1796) in paragraph at lines 16736--16739 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3102] [3103] [3104] [3105] Underfull \vbox (badness 10000) has occurred while \output is active [3106] [3107] [3108] [3109] [3110] [3111]) (./nlme-pkg.tex [3112] Chapter 25. [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] [3135] [3136] [3137] [3138] [3139] [3140] [3141] [3142] [3143] [3144] [3145] [3146] Underfull \hbox (badness 10000) in paragraph at lines 2258--2264 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161pdfTeX warning (ext4): destination with the same iden tifier (name{Rfn.corMatrix.corCompSymm}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.3194 ] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] Underfull \hbox (badness 1067) in paragraph at lines 4419--4424 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3180] [3181] [3182] [3183] [3184] [3185] [3186] [3187] [3188] [3189] [3190] [3191] Underfull \hbox (badness 10000) in paragraph at lines 5165--5169 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3192] [3193] [3194] [3195] [3196] [3197] [3198] Underfull \hbox (badness 10000) in paragraph at lines 5597--5600 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3199] [3200] [3201] [3202] [3203] [3204] [3205] Underfull \hbox (badness 10000) in paragraph at lines 5978--5983 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3206] [3207] [3208] [3209] Underfull \hbox (badness 1490) in paragraph at lines 6253--6264 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3210] Underfull \hbox (badness 10000) in paragraph at lines 6317--6319 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3211] [3212] [3213] [3214] [3215] [3216] Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3217] [3218] [3219] [3220] Underfull \hbox (badness 10000) in paragraph at lines 7002--7009 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3221] [3222] [3223] [3224] Underfull \hbox (badness 10000) in paragraph at lines 7262--7267 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3225] [3226] [3227] [3228] [3229] [3230] [3231] [3232] [3233] [3234] [3235] [3236] [3237] [3238] [3239] [3240] [3241] [3242] [3243] Underfull \hbox (badness 10000) in paragraph at lines 8535--8537 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3244] [3245] [3246] [3247] [3248] Underfull \hbox (badness 10000) in paragraph at lines 8814--8821 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3249] [3250] [3251] [3252] [3253] [3254] [3255] [3256] Underfull \hbox (badness 10000) in paragraph at lines 9336--9343 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3257] [3258] [3259] [3260] [3261]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9698 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.Matrix.1}) has been already used, dupl icate ignored \relax l.9698 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3262] [3263] [3264] [3265] [3266] [3267] [3268] [3269] [3270] [3271] [3272] [3273] Underfull \hbox (badness 1596) in paragraph at lines 10471--10497 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3274] [3275] Underfull \hbox (badness 1490) in paragraph at lines 10609--10615 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3276] [3277] [3278] [3279] Underfull \hbox (badness 10000) in paragraph at lines 10850--10852 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3280] [3281] [3282] [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] [3291] [3292] [3293] [3294] [3295] [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] [3310] [3311] [3312] [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] Underfull \hbox (badness 1286) in paragraph at lines 13747--13754 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330] [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342]pdfTeX war ning (ext4): destination with the same identifier (name{Rfn.random.effects}) ha s been already used, duplicate ignored \relax l.15190 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.random.effects.1}) has been already us ed, duplicate ignored \relax l.15190 ...Extract Random Effects}{random.effects} [3343] [3344] [3345] [3346] [3347] [3348] [3349] [3350] [3351] [3352] Underfull \hbox (badness 3884) in paragraph at lines 15830--15834 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15830--15834 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15830--15834 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3353] [3354] Underfull \hbox (badness 1067) in paragraph at lines 15942--15947 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3355] [3356] [3357] [3358] Underfull \hbox (badness 1448) in paragraph at lines 16185--16194 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] Underfull \hbox (badness 1728) in paragraph at lines 16889--16892 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3369] [3370] [3371] [3372] [3373] Underfull \hbox (badness 8056) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3374] [3375] [3376] [3377] [3378] Underfull \hbox (badness 10000) in paragraph at lines 17545--17553 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] [3387] [3388] Underfull \hbox (badness 10000) in paragraph at lines 18255--18265 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18255--18265 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3389] [3390] [3391] [3392] [3393] Underfull \hbox (badness 5036) in paragraph at lines 18579--18588 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] [3403] [3404] [3405] [3406]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.multinom.1}) has been already used, du plicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3407] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3408] [3409] [3410] [3411] [3412] [3413] [3414]) (./rpart-pkg.tex Chapter 27. [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/it/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/it/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/it/10 n \T1/ptm/m/n/10 for [3425] [3426] [3427] [3428] [3429] [3430] [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440] [3441] [3442] [3443]) (./spatial-pkg.tex [3444] Chapter 28. [3445] [3446] [3447] [3448] [3449] [3450] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] [3459] [3460] [3461] [3462] [3463]) (./survival-pkg.tex [3464] Chapter 29. [3465] [3466] [3467] [3468] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3469] [3470]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.aml.1}) has been already used, duplica te ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3471] [3472] [3473] [3474] [3475] [3476] [3477] [3478] [3479] [3480] [3481] Underfull \hbox (badness 1097) in paragraph at lines 1106--1108 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3482] [3483] [3484]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) has been already used, duplicate ignored \relax l.1308 ...erapy for Stage B/C colon cancer}{colon} Underfull \vbox (badness 10000) has occurred while \output is active [3485] Underfull \hbox (badness 3679) in paragraph at lines 1356--1360 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] Underfull \hbox (badness 3250) in paragraph at lines 1964--1979 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 1964--1979 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3494] [3495] [3496] [3497] [3498] [3499] [3500] [3501] [3502] [3503] [3504] [3505] [3506] [3507] [3508] [3509] [3510] Underfull \vbox (badness 10000) has occurred while \output is active [3511] [3512] [3513] Underfull \hbox (badness 1389) in paragraph at lines 3366--3368 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3514] [3515] [3516] [3517] Overfull \hbox (467.89665pt too wide) in alignment at lines 3652--3652 [] [] Underfull \vbox (badness 10000) has occurred while \output is active [3518] Overfull \vbox (8.56093pt too high) has occurred while \output is active [3519] [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] [3531] Underfull \vbox (badness 1629) has occurred while \output is active [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] [3543] Underfull \hbox (badness 5274) in paragraph at lines 5386--5388 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3544] [3545] [3546] [3547] [3548] [3549] [3550] [3551] [3552] [3553] [3554] [3555] [3556] [3557] [3558] [3559] [3560] [3561] Underfull \hbox (badness 1281) in paragraph at lines 6654--6657 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570]pdfTeX warning (e xt4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7224 ...ata from a soldering experiment}{solder} [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] Underfull \hbox (badness 1038) in paragraph at lines 8722--8728 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3592] [3593] [3594] [3595] [3596] Underfull \hbox (badness 10000) in paragraph at lines 9080--9085 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3597] [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] [3606] [3607] [3608] Underfull \hbox (badness 1354) in paragraph at lines 10020--10024 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. It gives th e time range [3609] [3610] [3611] [3612] [3613] Underfull \vbox (badness 10000) has occurred while \output is active [3614] [3615] [3616] [3617] [3618] [3619] [3620] [3621] [3622] [3623] [3624] [3625] [3626] [3627] [3628] [3629] [3630] [3631]) [3632] No file fullrefman.ind. (./fullrefman.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. Package rerunfilecheck Warning: File `fullrefman.out' has changed. 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . 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[116] Underfull \hbox (badness 2351) in paragraph at lines 8071--8074 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [117] [118] [119] [120] [121] Underfull \hbox (badness 4479) in paragraph at lines 8388--8399 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [122] [123] [124] [125] [126] [127] Underfull \hbox (badness 1629) in paragraph at lines 8842--8854 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 8842--8854 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] Underfull \hbox (badness 1178) in paragraph at lines 9595--9599 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] Underfull \hbox (badness 2744) in paragraph at lines 11904--11906 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] Underfull \hbox (badness 2253) in paragraph at lines 14100--14102 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [201] Underfull \hbox (badness 1490) in paragraph at lines 14135--14138 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [202] Underfull \hbox (badness 1565) in paragraph at lines 14217--14221 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [203] Underfull \hbox (badness 4927) in paragraph at lines 14268--14270 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [204] Underfull \hbox (badness 3148) in paragraph at lines 14370--14375 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider [205] Underfull \hbox (badness 1466) in paragraph at lines 14417--14420 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [206] Underfull \hbox (badness 10000) in paragraph at lines 14548--14552 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14559--14562 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [207] [208] [209] [210] [211] Underfull \hbox (badness 3965) in paragraph at lines 14856--14860 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] Underfull \hbox (badness 4429) in paragraph at lines 15645--15648 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 15751--15753 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [225] Underfull \hbox (badness 2035) in paragraph at lines 15824--15828 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [226] [227] [228] [229] [230] [231] [232] [233] [234] Underfull \hbox (badness 2452) in paragraph at lines 16437--16441 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16437--16441 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [235] [236] Underfull \hbox (badness 1092) in paragraph at lines 16610--16615 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [237] [238] [239] [240] Underfull \hbox (badness 6741) in paragraph at lines 16863--16867 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [241] [242] [243] Underfull \vbox (badness 10000) has occurred while \output is active [244] [245] [246] [247] [248] [249] [250] Underfull \vbox (badness 10000) has occurred while \output is active [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] Underfull \hbox (badness 1478) in paragraph at lines 18315--18318 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [261] [262] [263] [264] Underfull \hbox (badness 10000) in paragraph at lines 18587--18589 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 18593--18602 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [265] [266] [267] [268] [269] [270] [271] [272] Underfull \hbox (badness 1442) in paragraph at lines 19201--19203 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [273] [274] [275] [276] [277] Underfull \hbox (badness 10000) in paragraph at lines 19532--19538 [278] [279] [280] Underfull \hbox (badness 1248) in paragraph at lines 19777--19780 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [281] [282] [283] [284] [285] Underfull \hbox (badness 4739) in paragraph at lines 20040--20042 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [286] [287] [288] Underfull \hbox (badness 1603) in paragraph at lines 20267--20270 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [289] [290] [291] [292] [293] [294] [295] [296] [297] [298] [299] [300] [301] Underfull \hbox (badness 2469) in paragraph at lines 21124--21129 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [302] Underfull \hbox (badness 1675) in paragraph at lines 21212--21221 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21222--21237 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [303] Underfull \hbox (badness 10000) in paragraph at lines 21272--21275 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21272--21275 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [304] [305] Underfull \hbox (badness 1014) in paragraph at lines 21406--21411 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] [317] Underfull \hbox (badness 1264) in paragraph at lines 22255--22263 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [318] Underfull \hbox (badness 4441) in paragraph at lines 22289--22292 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] [329] Underfull \hbox (badness 5231) in paragraph at lines 23086--23088 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] [345] Underfull \hbox (badness 10000) in paragraph at lines 24179--24185 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24179--24185 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [346] [347] [348] [349] [350] [351] [352] Underfull \hbox (badness 2790) in paragraph at lines 24676--24679 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 24676--24679 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [353] [354] [355] [356] [357] Underfull \hbox (badness 1194) in paragraph at lines 24999--25002 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [358] [359] [360] Underfull \hbox (badness 2368) in paragraph at lines 25206--25212 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [361] [362] [363] [364] [365] Underfull \hbox (badness 10000) in paragraph at lines 25596--25599 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [366] [367] [368] [369] [370] [371] [372] [373] [374] Underfull \hbox (badness 10000) in paragraph at lines 26217--26219 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 1881) in paragraph at lines 27112--27115 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27137--27139 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [388] [389] Underfull \hbox (badness 2142) in paragraph at lines 27278--27282 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27335--27340 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [390] [391] [392] Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by [393] Underfull \hbox (badness 10000) in paragraph at lines 27642--27645 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 27668--27670 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 27710--27715 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 27716--27727 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 27716--27727 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 27728--27731 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [394] [395] [396] [397] [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] Underfull \hbox (badness 10000) in paragraph at lines 28128--28132 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [400] [401] Underfull \hbox (badness 10000) in paragraph at lines 28275--28278 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [402] Underfull \hbox (badness 7925) in paragraph at lines 28356--28360 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28356--28360 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28361--28370 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [403] [404] [405] [406] [407] [408] [409] [410] [411] [412] [413] [414] [415] [416] Underfull \hbox (badness 2726) in paragraph at lines 29357--29360 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] Underfull \hbox (badness 1603) in paragraph at lines 30107--30110 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [429] [430] [431] [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] [437] [438] [439] [440] [441] [442] Underfull \hbox (badness 1533) in paragraph at lines 31144--31147 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [443] [444] Underfull \hbox (badness 1163) in paragraph at lines 31307--31318 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [445] [446] [447] [448] [449] [450] [451] [452] [453] [454] [455] Underfull \vbox (badness 10000) has occurred while \output is active [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] Underfull \hbox (badness 10000) in paragraph at lines 32971--32975 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 32971--32975 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. [469] Underfull \hbox (badness 3557) in paragraph at lines 32992--32994 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 32995--32999 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [470] [471] [472] [473] [474] [475] [476] [477] Underfull \hbox (badness 1655) in paragraph at lines 33589--33591 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [478] [479] [480] [481] [482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493] [494] [495] Underfull \hbox (badness 2261) in paragraph at lines 34795--34800 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] [510] Underfull \hbox (badness 10000) in paragraph at lines 35915--35926 \T1/zi4/m/n/10 / / docs . microsoft . com / en-[]us / cpp / c-[]language / pars ing-[]c-[]command-[]line-[]arguments ? [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] [532] Underfull \hbox (badness 10000) in paragraph at lines 37446--37448 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [533] [534] [535] [536] [537] [538] Underfull \hbox (badness 2913) in paragraph at lines 37866--37870 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [539] [540] [541] Underfull \hbox (badness 1072) in paragraph at lines 38112--38116 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38117--38121 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [542] Underfull \hbox (badness 10000) in paragraph at lines 38157--38163 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38157--38163 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38157--38163 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38172--38179 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [543] [544] [545] Underfull \hbox (badness 2644) in paragraph at lines 38407--38411 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [546] [547] Underfull \hbox (badness 1142) in paragraph at lines 38560--38566 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [548] [549] [550] [551] [552] [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] Underfull \hbox (badness 1158) in paragraph at lines 39866--39868 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [567] [568] [569] [570] [571] [572] [573] [574] [575] Underfull \hbox (badness 1137) in paragraph at lines 40457--40463 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails [576] Underfull \hbox (badness 4967) in paragraph at lines 40476--40481 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [577] Underfull \hbox (badness 1616) in paragraph at lines 40596--40601 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [578] [579] [580] [581] [582] [583] [584] [585] [586] Underfull \hbox (badness 1472) in paragraph at lines 41143--41146 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [587] [588] [589] [590] [591] [592] [593] [594] [595] [596] [597] [598] [599] Underfull \hbox (badness 10000) in paragraph at lines 42069--42073 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [600] [601] [602] [603] Underfull \hbox (badness 10000) in paragraph at lines 42320--42323 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [604] [605] [606] Underfull \hbox (badness 10000) in paragraph at lines 42504--42508 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [607] [608] [609] [610] [611] [612] [613] [614] Underfull \hbox (badness 10000) in paragraph at lines 43143--43146 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626] [627] Underfull \hbox (badness 1990) in paragraph at lines 44065--44073 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 44065--44073 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638] [639] [640] [641] Underfull \hbox (badness 2452) in paragraph at lines 45034--45040 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [642] [643] [644] [645] [646] [647] Underfull \hbox (badness 3668) in paragraph at lines 45432--45434 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [648] Underfull \hbox (badness 2401) in paragraph at lines 45562--45566 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [649] [650] [651] [652] Underfull \hbox (badness 2111) in paragraph at lines 45770--45775 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [653] [654] [655] Underfull \hbox (badness 4001) in paragraph at lines 46016--46018 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [656] [657] [658] [659] [660] Underfull \hbox (badness 5417) in paragraph at lines 46381--46385 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [661] Underfull \hbox (badness 10000) in paragraph at lines 46442--46446 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [662]) (./compiler-pkg.tex Chapter 2. [663] [664] [665] [666]) (./datasets-pkg.tex Chapter 3. [667] [668] [669] [670] [671] [672] Underfull \vbox (badness 1472) has occurred while \output is active [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Overfull \vbox (4.26088pt too high) has occurred while \output is active [704] [705] [706] [707] [708] [709] Overfull \vbox (13.87083pt too high) has occurred while \output is active [710] Underfull \vbox (badness 2376) has occurred while \output is active [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] Overfull \vbox (10.49593pt too high) has occurred while \output is active [727] Overfull \vbox (15.49593pt too high) has occurred while \output is active [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742]) (./grDevices-pkg.tex Chapter 4. [743] [744] [745] [746] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [747] [748] [749] [750] [751] [752] [753] [754] [755] Underfull \hbox (badness 1424) in paragraph at lines 898--900 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [756] [757] [758] [759] [760] Underfull \hbox (badness 5175) in paragraph at lines 1192--1194 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [761] [762] Underfull \hbox (badness 2512) in paragraph at lines 1311--1313 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [763] [764] [765] [766] Underfull \hbox (badness 1490) in paragraph at lines 1611--1616 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1624--1628 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [767] [768] [769] [770] [771] [772] Underfull \hbox (badness 1325) in paragraph at lines 2038--2048 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [773] [774] Underfull \hbox (badness 10000) in paragraph at lines 2150--2152 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [775] [776] Underfull \hbox (badness 6758) in paragraph at lines 2329--2332 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [777] [778] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] [782] [783] [784] [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2940--2941 Underfull \vbox (badness 10000) has occurred while \output is active [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] Underfull \vbox (badness 10000) has occurred while \output is active [802] Underfull \hbox (badness 10000) in paragraph at lines 4016--4019 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] Underfull \vbox (badness 10000) has occurred while \output is active [814] [815] Underfull \hbox (badness 1584) in paragraph at lines 4910--4912 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 4914--4921 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [816] [817] [818] [819] Underfull \hbox (badness 1377) in paragraph at lines 5220--5225 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [820] Underfull \hbox (badness 1418) in paragraph at lines 5296--5303 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5314--5316 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [821] Underfull \hbox (badness 1377) in paragraph at lines 5425--5430 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [822] Underfull \hbox (badness 7344) in paragraph at lines 5494--5496 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [823] [824] Underfull \hbox (badness 2035) in paragraph at lines 5632--5641 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5632--5641 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5632--5641 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [825] [826] Underfull \hbox (badness 10000) in paragraph at lines 5700--5702 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / [827] [828] Underfull \hbox (badness 1546) in paragraph at lines 5844--5852 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] [836] Underfull \hbox (badness 10000) in paragraph at lines 6382--6385 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [837] [838] [839] [840] [841] [842] [843] [844] [845] [846] [847] [848] Underfull \hbox (badness 1189) in paragraph at lines 7211--7213 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [849] Underfull \hbox (badness 10000) in paragraph at lines 7316--7318 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [850] [851] [852] [853] [854] Underfull \hbox (badness 3780) in paragraph at lines 7630--7636 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [855] [856] [857] [858] [859]) (./graphics-pkg.tex [860] Chapter 5. [861] [862] [863] [864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875] Overfull \hbox (12.71341pt too wide) in paragraph at lines 983--983 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] Underfull \hbox (badness 4634) in paragraph at lines 1357--1360 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [882] [883] [884] [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] Underfull \hbox (badness 1728) in paragraph at lines 2335--2337 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [897] Underfull \hbox (badness 1009) in paragraph at lines 2428--2435 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] Underfull \vbox (badness 10000) has occurred while \output is active [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] Underfull \hbox (badness 3229) in paragraph at lines 4652--4657 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [932] [933] [934] [935] [936] Underfull \hbox (badness 1107) in paragraph at lines 5081--5087 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [937] Underfull \hbox (badness 10000) in paragraph at lines 5210--5213 [938] Underfull \hbox (badness 10000) in paragraph at lines 5271--5273 [939 ] [940 ] [941] [942] [943] [944] [945] [946] [947] [948]pdfTeX warning (ext4): destinati on with the same identifier (name{Rfn.plot}) has been already used, duplicate i gnored \relax l.5943 \aliasA{plot}{plot.default}{plot} [949] [950] [951] [952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6848--6849 [][] [963 ] [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] Underfull \hbox (badness 4954) in paragraph at lines 8936--8938 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 8938--8940 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [995]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.unit s}) has been already used, duplicate ignored \relax l.9018 \HeaderA{units}{Graphical Units}{units} [996] [997] [998] [999]) (./grid-pkg.tex [1000] Chapter 6. [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1019] Underfull \vbox (badness 10000) has occurred while \output is active [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) in paragraph at lines 3041--3043 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] Underfull \vbox (badness 10000) has occurred while \output is active [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] Underfull \hbox (badness 1067) in paragraph at lines 4761--4764 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1075] [1076] [1077] [1078] [1079] [1080] Underfull \hbox (badness 7256) in paragraph at lines 5112--5114 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \hbox (badness 2142) in paragraph at lines 5561--5565 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1088] Underfull \hbox (badness 4699) in paragraph at lines 5632--5637 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118]) (./methods-pkg.tex Chapter 7. [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] Underfull \vbox (badness 10000) has occurred while \output is active [1127] Underfull \vbox (badness 10000) has occurred while \output is active [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1145] [1146] [1147] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1153] [1154] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1155] [1156] [1157] [1158] [1159] [1160] [1161] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1162] [1163] [1164] [1165] [1166] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1169] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1178] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] Underfull \vbox (badness 10000) has occurred while \output is active [1187] Underfull \vbox (badness 10000) has occurred while \output is active [1188] [1189] [1190] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1191] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1192] [1193] [1194] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1203] [1204] [1205] [1206] Underfull \vbox (badness 10000) has occurred while \output is active [1207] [1208] [1209]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1210] [1211] [1212]pdfTeX warning (ext4): desti nation with the same identifier (name{Rfn.Complex}) has been already used, dupl icate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destinat ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) has been already used, duplicate igno red \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination wi th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor ed \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1213] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1214] [1215] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1256] [1257] [1258]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1259] [1260] [1261] [1262] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] Underfull \hbox (badness 3386) in paragraph at lines 1402--1405 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1279] [1280] [1281]) (./splines-pkg.tex [1282] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] [1295] [1296]) (./stats-pkg.tex Chapter 10. [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] Underfull \hbox (badness 1412) in paragraph at lines 887--889 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1310] [1311] [1312] [1313] [1314] [1315] [1316] Underfull \hbox (badness 2503) in paragraph at lines 1369--1372 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] Underfull \hbox (badness 2503) in paragraph at lines 3530--3533 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1349] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3642. [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] Underfull \hbox (badness 3989) in paragraph at lines 4787--4794 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2556) in paragraph at lines 5424--5427 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1377] [1378] [1379] [1380] [1381] [1382] Underfull \hbox (badness 2503) in paragraph at lines 5838--5842 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] Underfull \hbox (badness 7081) in paragraph at lines 6632--6635 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6636--6638 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1395] Underfull \vbox (badness 10000) has occurred while \output is active [1396] [1397] [1398] [1399] Underfull \vbox (badness 10000) has occurred while \output is active [1400] [1401] [1402] [1403] [1404] [1405] [1406] Underfull \hbox (badness 10000) in paragraph at lines 7493--7496 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428] [1429] [1430] [1431] [1432] Underfull \hbox (badness 2626) in paragraph at lines 9185--9188 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1433] [1434] Underfull \hbox (badness 2503) in paragraph at lines 9292--9296 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] Underfull \hbox (badness 4518) in paragraph at lines 10644--10649 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1454] [1455] [1456] [1457] [1458] Underfull \hbox (badness 2142) in paragraph at lines 11005--11008 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11024--11027 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1459] Underfull \hbox (badness 1708) in paragraph at lines 11086--11090 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1460] [1461] [1462] [1463] [1464] Underfull \hbox (badness 1694) in paragraph at lines 11482--11485 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.hat}) has been already used, dupl icate ignored \relax l.11963 \aliasA{hat}{influence.measures}{hat} [1473] [1474] Underfull \hbox (badness 1484) in paragraph at lines 12105--12107 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] Underfull \hbox (badness 10000) in paragraph at lines 12707--12709 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1484] [1485] [1486] [1487] [1488] Underfull \hbox (badness 2894) in paragraph at lines 13043--13047 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1489] [1490] [1491] [1492] [1493] [1494] Underfull \hbox (badness 1496) in paragraph at lines 13457--13463 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1495] [1496] [1497] [1498] [1499] [1500] Underfull \hbox (badness 4518) in paragraph at lines 13855--13860 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] Underfull \hbox (badness 4518) in paragraph at lines 14522--14527 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1511] [1512] Underfull \hbox (badness 6412) in paragraph at lines 14660--14664 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14667--14669 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] [1528] Underfull \hbox (badness 2503) in paragraph at lines 15743--15747 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1529] [1530] [1531] [1532] [1533] [1534] [1535] Underfull \hbox (badness 10000) in paragraph at lines 16253--16259 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16253--16259 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 1158) in paragraph at lines 17906--17909 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1561] [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1377) in paragraph at lines 18933--18938 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on [1576] Underfull \hbox (badness 1735) in paragraph at lines 18938--18941 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18951--18955 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18951--18955 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 18959--18963 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1577] [1578] [1579] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19184--19184 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19187--19187 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1580] [1581] [1582] [1583] [1584] [1585] [1586] Underfull \hbox (badness 1337) in paragraph at lines 19646--19649 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1587] [1588] [1589] [1590] [1591] [1592] [1593] [1594] Underfull \hbox (badness 10000) in paragraph at lines 20117--20123 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1595] [1596] [1597] [1598] [1599] Underfull \hbox (badness 1194) in paragraph at lines 20447--20450 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1600] [1601] [1602] [1603] [1604] [1605] Underfull \hbox (badness 2503) in paragraph at lines 20826--20829 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1606] Underfull \hbox (badness 3919) in paragraph at lines 20853--20855 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1607] [1608] [1609] [1610] [1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 10000) in paragraph at lines 21932--21938 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] Underfull \hbox (badness 1337) in paragraph at lines 23289--23295 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1644] [1645] [1646] [1647] [1648] [1649] [1650] Underfull \hbox (badness 1436) in paragraph at lines 23714--23717 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1651] [1652] Underfull \hbox (badness 10000) in paragraph at lines 23855--23856 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] [1666] Underfull \hbox (badness 1824) in paragraph at lines 24827--24833 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24827--24833 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 24848--24851 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675] Underfull \hbox (badness 2165) in paragraph at lines 25429--25434 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1676] [1677] [1678] [1679] Underfull \hbox (badness 1867) in paragraph at lines 25638--25640 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25653--25657 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \hbox (badness 3514) in paragraph at lines 27301--27306 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1704] [1705] [1706] [1707] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27535--27535 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1708] Underfull \hbox (badness 3514) in paragraph at lines 27571--27577 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1709] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27628--27628 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27630--27630 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1710] [1711] Underfull \hbox (badness 3514) in paragraph at lines 27804--27809 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1712] [1713] Underfull \hbox (badness 3514) in paragraph at lines 27891--27896 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1714] Underfull \hbox (badness 3514) in paragraph at lines 27956--27961 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1715] Underfull \hbox (badness 3514) in paragraph at lines 28050--28055 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1716] [1717] Underfull \hbox (badness 6691) in paragraph at lines 28142--28147 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] Underfull \hbox (badness 4024) in paragraph at lines 28633--28636 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] Underfull \hbox (badness 5431) in paragraph at lines 29239--29241 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1735] [1736] [1737] [1738] Underfull \hbox (badness 5431) in paragraph at lines 29449--29452 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1739] [1740] [1741] [1742] [1743] Underfull \hbox (badness 1337) in paragraph at lines 29764--29768 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1744] [1745] [1746] [1747] Underfull \hbox (badness 1616) in paragraph at lines 30082--30085 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1748] [1749] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] [1765] Underfull \hbox (badness 3557) in paragraph at lines 31217--31221 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1766] [1767] Underfull \vbox (badness 10000) has occurred while \output is active [1768] [1769] [1770] Underfull \hbox (badness 1337) in paragraph at lines 31581--31585 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1771] [1772] [1773] [1774] [1775] [1776] [1777] [1778] Underfull \hbox (badness 1337) in paragraph at lines 32110--32114 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1779] [1780] [1781] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32317--32317 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1782] [1783] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32478--32478 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1784] [1785] [1786] [1787] [1788]) (./stats4-pkg.tex Chapter 11. [1789] [1790] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] [1793] [1794] [1795] [1796]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.show.Rdash.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1797] [1798] [1799]) (./tcltk-pkg.tex [1800] Chapter 12. [1801] [1802] [1803] [1804] [1805] [1806] [1807] Underfull \vbox (badness 10000) has occurred while \output is active [1808] Underfull \hbox (badness 1546) in paragraph at lines 666--673 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820]) (./tools-pkg.tex Chapter 13. [1821] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1822] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1823] [1824] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1825] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1826] [1827] Underfull \hbox (badness 1142) in paragraph at lines 463--467 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1828] [1829] [1830] [1831] [1832] Overfull \vbox (7.18602pt too high) has occurred while \output is active [1833] [1834] [1835] [1836] [1837] [1838] Underfull \hbox (badness 1014) in paragraph at lines 1174--1176 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1180--1182 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous Underfull \hbox (badness 10000) in paragraph at lines 1217--1220 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1217--1220 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1839] [1840] [1841] [1842] [1843] Underfull \hbox (badness 2293) in paragraph at lines 1569--1571 []\T1/zi4/m/n/10 CRAN_memtest_notes() []\T1/ptm/m/n/10 is now dep-re-cated, wit h its func-tion-al-ity in-te-grated into that of [1844] Underfull \hbox (badness 10000) in paragraph at lines 1595--1598 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1845] [1846] Underfull \hbox (badness 4096) in paragraph at lines 1714--1722 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1724--1726 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1847] [1848] [1849]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1926 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ig nored \relax l.1927 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1850] [1851] [1852] [1853] Overfull \hbox (8.25941pt too wide) in paragraph at lines 2230--2230 [] \T1/zi4/m/n/9 r"(\newcommand{\Rlogo}{\if{html}{\figure{Rlogo.svg}{option s: width=100 alt="R logo"}})",[] [1854] [1855] [1856] Underfull \hbox (badness 4096) in paragraph at lines 2399--2407 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1857] [1858] [1859] [1860] [1861] [1862] [1863] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2894. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2894. [1864] [1865] [1866] [1867] Underfull \hbox (badness 1424) in paragraph at lines 3196--3198 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] Underfull \hbox (badness 10000) in paragraph at lines 3902--3904 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 4041--4044 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1881] [1882] [1883] [1884] [1885] Underfull \hbox (badness 1796) in paragraph at lines 4399--4404 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1886] Underfull \hbox (badness 4699) in paragraph at lines 4449--4453 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4449--4453 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from Underfull \hbox (badness 1838) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4477--4483 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1887] [1888] [1889] [1890] Underfull \hbox (badness 2197) in paragraph at lines 4750--4760 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1891] Underfull \hbox (badness 1571) in paragraph at lines 4816--4820 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1892] [1893] [1894] [1895]) (./utils-pkg.tex [1896] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] Underfull \hbox (badness 10000) in paragraph at lines 726--732 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 726--732 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1907] [1908] [1909] Underfull \hbox (badness 3861) in paragraph at lines 931--936 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1910] [1911] [1912] Underfull \hbox (badness 3323) in paragraph at lines 1115--1123 []\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use []\T1/zi4/m/it /10 bibtex = T|F []\T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m $\T1/ptm/m/n/10 , in-di-cat- Underfull \hbox (badness 2961) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f or-mat- Underfull \hbox (badness 3919) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is Underfull \hbox (badness 2875) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 taken as [][][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex. max", 1) []\T1/ptm/m/n/10 which is []\T1/zi4/m/it/10 1 []\T1/ptm/m/n/10 typ-i-c ally. Underfull \hbox (badness 1817) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f ault by Underfull \hbox (badness 10000) in paragraph at lines 1127--1129 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 1371) in paragraph at lines 1638--1640 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1920] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1708. [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 2057) in paragraph at lines 2359--2361 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1930] [1931] [1932] [1933] [1934]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.clipboard}) has been already used, duplicate ignored \relax l.2711 ... the Clipboard in MS Windows}{clipboard} [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] Underfull \hbox (badness 6842) in paragraph at lines 4010--4015 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1954] Underfull \hbox (badness 1430) in paragraph at lines 4073--4077 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1955] Underfull \hbox (badness 1184) in paragraph at lines 4144--4160 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/it/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4144--4160 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/it/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4144--4160 \T1/ptm/m/n/10 able []\T1/zi4/m/it/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1956] [1957] Underfull \hbox (badness 10000) in paragraph at lines 4285--4287 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968]pdf TeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5054 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.format.1}) has been already used, dupl icate ignored \relax l.5054 ...mat Unordered and Ordered Lists}{format} [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 1622) in paragraph at lines 5577--5581 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [1977] [1978] [1979] [1980] [1981] [1982] Underfull \hbox (badness 1448) in paragraph at lines 5956--5961 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [1983] [1984] [1985] [1986] [1987] [1988] [1989] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6502. [1990] Underfull \hbox (badness 1371) in paragraph at lines 6506--6508 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1991] Underfull \hbox (badness 1502) in paragraph at lines 6595--6600 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6595--6600 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [1992] [1993] Underfull \hbox (badness 10000) in paragraph at lines 6768--6777 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [1994] Underfull \hbox (badness 2150) in paragraph at lines 6832--6835 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [1995] [1996] Underfull \hbox (badness 3118) in paragraph at lines 6971--6973 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [1997] [1998] Underfull \hbox (badness 1325) in paragraph at lines 7150--7154 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [1999] Underfull \hbox (badness 1424) in paragraph at lines 7242--7245 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2000] Underfull \hbox (badness 3219) in paragraph at lines 7313--7320 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7313--7320 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7313--7320 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7313--7320 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7321--7324 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2001] [2002] Underfull \hbox (badness 1024) in paragraph at lines 7448--7451 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7481--7486 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013] Underfull \hbox (badness 10000) in paragraph at lines 8185--8187 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2014] [2015] [2016] [2017] [2018] [2019] [2020] [2021] [2022] [2023] [2024] [2025] Underfull \hbox (badness 2310) in paragraph at lines 8945--8950 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2026] [2027] [2028] [2029] [2030] [2031] [2032] Underfull \hbox (badness 1248) in paragraph at lines 9471--9475 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2033] Underfull \hbox (badness 1789) in paragraph at lines 9551--9553 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2034] [2035] [2036] [2037] [2038] [2039] [2040] [2041] [2042] Underfull \vbox (badness 5533) has occurred while \output is active [2043] [2044] [2045] Underfull \hbox (badness 1097) in paragraph at lines 10388--10391 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2046] [2047] Underfull \hbox (badness 3000) in paragraph at lines 10524--10529 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 2134) in paragraph at lines 11113--11118 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2056] Underfull \hbox (badness 10000) in paragraph at lines 11169--11174 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11169--11174 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \hbox (badness 2469) in paragraph at lines 11663--11667 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11663--11667 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 4060) in paragraph at lines 12087--12090 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2070] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12110--12110 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2071] [2072] [2073] Underfull \hbox (badness 2150) in paragraph at lines 12365--12367 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2074] [2075] [2076] [2077] Underfull \hbox (badness 10000) in paragraph at lines 12585--12589 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12618--12624 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12633--12641 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2078] [2079] Underfull \hbox (badness 1009) in paragraph at lines 12812--12824 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If [2080] Underfull \hbox (badness 4779) in paragraph at lines 12852--12854 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 12882--12889 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2081] [2082] [2083] [2084] [2085] [2086] Underfull \hbox (badness 3780) in paragraph at lines 13290--13294 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13306--13309 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2087] [2088] [2089] Underfull \hbox (badness 2302) in paragraph at lines 13511--13513 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2090] [2091] [2092] [2093] [2094] Underfull \hbox (badness 10000) in paragraph at lines 13810--13815 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/it/10 deparse[][][](control = ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 13819--13822 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2095] [2096] [2097] [2098] [2099] [2100] [2101] Underfull \hbox (badness 2932) in paragraph at lines 14252--14259 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14252--14259 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/it/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2102] [2103] Underfull \hbox (badness 1460) in paragraph at lines 14417--14425 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2104] [2105] Underfull \hbox (badness 6510) in paragraph at lines 14567--14571 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14574--14577 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14574--14577 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2106] [2107] [2108] [2109] [2110] [2111] [2112] [2113] [2114] Underfull \hbox (badness 10000) in paragraph at lines 15243--15248 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15243--15248 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15249--15251 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2115] Underfull \hbox (badness 10000) in paragraph at lines 15308--15311 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129] [2130]) [2131] [2132] (./KernSmooth-pkg.tex Chapter 15. [2133] [2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]) (./MASS-pkg.tex Chapter 16. [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] Underfull \hbox (badness 10000) in paragraph at lines 2871--2876 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2183] [2184] Underfull \hbox (badness 4686) in paragraph at lines 3039--3041 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] [2209] Underfull \hbox (badness 1117) in paragraph at lines 4810--4813 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2210] Underfull \hbox (badness 1117) in paragraph at lines 4888--4891 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6151 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.npk.1}) has been already used, duplica te ignored \relax l.6151 ...sical N, P, K Factorial Experiment}{npk} [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 1117) in paragraph at lines 7122--7129 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2241] Underfull \hbox (badness 3138) in paragraph at lines 7193--7199 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2242] [2243] [2244] Underfull \hbox (badness 1910) in paragraph at lines 7372--7375 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] Underfull \hbox (badness 4686) in paragraph at lines 8005--8007 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2291] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 5119) in paragraph at lines 488--492 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2297] Underfull \hbox (badness 2035) in paragraph at lines 584--587 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2298] [2299] [2300] [2301] Underfull \hbox (badness 1521) in paragraph at lines 860--865 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 860--865 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 860--865 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2302] [2303] Underfull \hbox (badness 10000) in paragraph at lines 1042--1044 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2304] [2305]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.chol}) has been already used, duplicate ignored \relax l.1154 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.chol.1}) has been already used, duplic ate ignored \relax l.1154 ...- 'Matrix' S4 Generic and Methods}{chol} [2306] [2307] [2308] Underfull \hbox (badness 2277) in paragraph at lines 1424--1427 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2309] [2310] [2311] Underfull \hbox (badness 1097) in paragraph at lines 1594--1597 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1600--1604 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.1657 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colSums.1}) has been already used, dup licate ignored \relax l.1657 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colMeans}) has been already used, dupl icate ignored \relax l.1658 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowMeans}) has been already used, duplicate i gnored \relax l.1681 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowSums}) has been already used, duplicate ig nored \relax l.1694 \aliasA{rowSums}{colSums}{rowSums} [2312] [2313pdfTeX warning (ext4): de stination with the same identifier (name{Rfn.rowMeans,diagonalMatrix.Rdash.meth od}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1773 ...), matrix(1:3, 3,4), diag(3:2))) # 7 x 8 pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.rowSums,diagonalMatrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1773 ...), matrix(1:3, 3,4), diag(3:2))) # 7 x 8 ] [2314] [2315] Underfull \hbox (badness 3547) in paragraph at lines 1915--1918 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2316] [2317] [2318] [2319] Underfull \hbox (badness 1983) in paragraph at lines 2337--2345 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/it/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2320] [2321] [2322] [2323] Underfull \hbox (badness 2717) in paragraph at lines 2726--2730 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2324] [2325] Underfull \hbox (badness 6842) in paragraph at lines 2816--2819 []\T1/zi4/m/it/10 Diagonal() []\T1/ptm/m/n/10 re-turns an ob-ject of class [][] []\T1/zi4/m/it/10 ddiMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 ldi Matrix[][][] []\T1/ptm/m/n/10 (with ``su-per-class'' [2326] Underfull \hbox (badness 8019) in paragraph at lines 2957--2959 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 2960--2964 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2327pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coer ce,diagonalMatrix,nMatrix.Rdash.method}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.2980 ] [2328] [2329] Underfull \hbox (badness 1902) in paragraph at lines 3213--3215 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2330] Underfull \hbox (badness 2020) in paragraph at lines 3247--3250 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2331] [2332] Underfull \hbox (badness 4378) in paragraph at lines 3451--3460 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/it/10 selectMethod("coerce", c(from="dsyMat rix", [2333] Underfull \hbox (badness 1354) in paragraph at lines 3519--3522 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2334] [2335] [2336] [2337] [2338] Underfull \hbox (badness 4518) in paragraph at lines 3935--3938 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 3938--3941 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2339] [2340] Underfull \hbox (badness 2318) in paragraph at lines 4062--4066 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2341] Underfull \hbox (badness 3240) in paragraph at lines 4193--4197 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2342] [2343] [2344pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coerce,dtrMatrix,dgeMatrix.Rdash.method}) has been already used, dupl icate ignored ...shipout:D \box_use:N \l_shipout_box l.4350 \item[\code{x}:] Object of class \code{"numeric"}. The numeric] [2345] [2346] [2347] [2348] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4635--4635 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4642--4642 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2349] [2350] [2351] Underfull \hbox (badness 1931) in paragraph at lines 4848--4850 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2352] [2353] [2354] [2355] Underfull \hbox (badness 1005) in paragraph at lines 5151--5156 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5151--5156 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 5170--5173 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2356] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5219--5219 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2357] Underfull \hbox (badness 3229) in paragraph at lines 5326--5335 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the [2358] Underfull \hbox (badness 10000) in paragraph at lines 5368--5370 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5373--5376 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low Underfull \hbox (badness 10000) in paragraph at lines 5383--5386 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2359] [2360] [2361] [2362] [2363] Overfull \hbox (26.39984pt too wide) in paragraph at lines 5776--5776 []\T1/zi4/m/it/10 isSymmetric(object, tol = 100 * .Machine$double.eps, tol1 = 8 * tol, checkDN = TRUE, ...)[] [2364] [2365] [2366] [2367] [2368] [2369] [2370] Underfull \hbox (badness 2478) in paragraph at lines 6402--6407 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 6410--6413 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2371] [2372] [2373] Underfull \hbox (badness 10000) in paragraph at lines 6751--6754 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2374] Underfull \hbox (badness 10000) in paragraph at lines 6830--6833 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2375] Underfull \hbox (badness 2050) in paragraph at lines 6929--6932 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2376] [2377] [2378] [2379] [2380] [2381]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7358 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7449--7451 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode [2382pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coer ce,Matrix,denseMatrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.7454 \item[image] \code{signature(object = "Matrix")}: draws an] Underfull \hbox (badness 4846) in paragraph at lines 7454--7457 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7459--7462 [2383]pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rp cent.*.Rpcent.}) has been already used, duplicate ignored \relax l.7532 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.crossprod}) has been already used, dup licate ignored \relax l.7629 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.tcrossprod}) has been already used, du plicate ignored \relax l.7723 ...tcrossprod}{matrix-products}{tcrossprod} [2384] Underfull \hbox (badness 10000) in paragraph at lines 7892--7897 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7892--7897 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7901--7903 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7903--7905 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2385] [2386] Underfull \hbox (badness 1430) in paragraph at lines 8054--8059 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2387] [2388] Underfull \hbox (badness 10000) in paragraph at lines 8177--8179 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2389] [2390] Underfull \vbox (badness 10000) has occurred while \output is active [2391] Underfull \hbox (badness 2478) in paragraph at lines 8386--8391 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8394--8397 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2392] [2393] Underfull \hbox (badness 5924) in paragraph at lines 8586--8588 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2394]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.nor m}) has been already used, duplicate ignored \relax l.8626 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignor ed \relax l.8626 \HeaderA{norm}{Matrix Norms}{norm} [2395] [2396] [2397] Underfull \hbox (badness 10000) in paragraph at lines 9036--9039 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2398] Underfull \hbox (badness 10000) in paragraph at lines 9118--9121 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2399] [2400] Underfull \hbox (badness 4242) in paragraph at lines 9253--9256 [][][]\T1/zi4/m/it/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/it/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2401] [2402] Underfull \hbox (badness 10000) in paragraph at lines 9332--9334 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2403] [2404] [2405]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9569 \aliasA{qr}{qr-methods}{qr} [2406] [2407] [2408] Underfull \hbox (badness 7186) in paragraph at lines 9736--9742 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2409] [2410]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.rcond}) has been already used, duplicate ignored \relax l.9893 ... the Reciprocal Condition Number}{rcond} [2411] [2412] [2413] [2414] Underfull \hbox (badness 2351) in paragraph at lines 10202--10210 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 10202--10210 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2415] [2416] [2417] [2418]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.solve}) has been already used, duplicate ignored \relax l.10470 \aliasA{solve}{solve-methods}{solve} [2419] [2420] Underfull \hbox (badness 4403) in paragraph at lines 10706--10709 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2421] Underfull \hbox (badness 10000) in paragraph at lines 10776--10779 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10812--10815 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10823--10827 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2422] [2423] [2424] [2425] [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \hbox (badness 10000) in paragraph at lines 11395--11403 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11395--11403 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11420--11428 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11420--11428 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2430]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr. Q}) has been already used, duplicate ignored \relax l.11486 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2431] [2432] Underfull \hbox (badness 5036) in paragraph at lines 11672--11674 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2433] [2434] Underfull \hbox (badness 2828) in paragraph at lines 11834--11837 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11856--11859 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2435] Underfull \vbox (badness 10000) has occurred while \output is active [2436] [2437] [2438] [2439] Underfull \hbox (badness 2057) in paragraph at lines 12207--12209 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2440] [2441] Underfull \hbox (badness 10000) in paragraph at lines 12381--12386 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12387--12393 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2442] Underfull \hbox (badness 1902) in paragraph at lines 12422--12426 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2443] [2444] [2445] [2446] [2447] [2448] [2449] [2450] Underfull \hbox (badness 6910) in paragraph at lines 13147--13149 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2451] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 13194. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 13194. [2452] [2453] [2454]) (./boot-pkg.tex Chapter 18. [2455] [2456] [2457] [2458] [2459] [2460] [2461] [2462] [2463] [2464] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2465] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2466] Underfull \vbox (badness 10000) has occurred while \output is active [2467] [2468] [2469] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2470] [2471] [2472] [2473] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2474] [2475] [2476] [2477] [2478] [2479] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2483] [2484] [2485] [2486] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2487] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2488] [2489] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2490] [2491] [2492] [2493] [2494] [2495] [2496] [2497] [2498] [2499] [2500] [2501] [2502] [2503] [2504] [2505] [2506] [2507] [2508] [2509] [2510] [2511] [2512] [2513] [2514] [2515] [2516] [2517] [2518] [2519] [2520] [2521] [2522] [2523] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2524] [2525] [2526] [2527] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2528] [2529] [2530] [2531] [2532] [2533] [2534] [2535] [2536] [2537] [2538] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2539] [2540] [2541] [2542] [2543] [2544] [2545] [2546] [2547] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2548] [2549] [2550] [2551] [2552] [2553] [2554] [2555] [2556] [2557]) (./class-pkg.tex [2558] Chapter 19. [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570] [2571] [2572] [2573] [2574]) (./cluster-pkg.tex Chapter 20. [2575] [2576] [2577] [2578] [2579] Underfull \vbox (badness 7777) has occurred while \output is active [2580] [2581] [2582] [2583] [2584] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2585] [2586] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2587] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2588] [2589] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2590] [2591] [2592] [2593] [2594] [2595] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2596] [2597] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2598] Underfull \hbox (badness 4954) in paragraph at lines 1686--1688 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/i t/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2599] Underfull \hbox (badness 7667) in paragraph at lines 1699--1703 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1699--1703 \T1/ptm/m/n/10 (incl []\T1/zi4/m/it/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/it/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/it/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2600] [2601] [2602] [2603] [2604] [2605] Underfull \hbox (badness 10000) in paragraph at lines 2207--2210 [2606] Underfull \hbox (badness 10000) in paragraph at lines 2221--2227 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2607] [2608] [2609] Underfull \hbox (badness 6675) in paragraph at lines 2456--2458 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2610] [2611] [2612] [2613] [2614] [2615] [2616] [2617] Underfull \hbox (badness 2980) in paragraph at lines 3051--3055 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2618] [2619] [2620] [2621] [2622] [2623] Underfull \hbox (badness 1142) in paragraph at lines 3392--3395 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2624] [2625] Underfull \hbox (badness 1142) in paragraph at lines 3511--3514 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2626] [2627] [2628] Underfull \hbox (badness 2582) in paragraph at lines 3734--3739 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2629] Underfull \hbox (badness 2698) in paragraph at lines 3796--3801 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3796--3801 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2630] [2631] [2632] [2633] [2634] Underfull \hbox (badness 10000) in paragraph at lines 4088--4090 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2635] [2636] [2637] [2638] Underfull \hbox (badness 2626) in paragraph at lines 4317--4322 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2639] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2640] [2641] [2642] [2643] [2644] [2645] [2646] Underfull \hbox (badness 10000) in paragraph at lines 4839--4841 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2647] [2648]) (./codetools-pkg.tex Chapter 21. [2649] [2650] [2651] [2652] [2653]) (./foreign-pkg.tex [2654] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2655] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2656] [2657] [2658] [2659] [2660] [2661] [2662] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, [2663] Overfull \hbox (6.73795pt too wide) in paragraph at lines 624--624 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2664] [2665] [2666] Underfull \hbox (badness 10000) in paragraph at lines 812--813 [2667] Underfull \hbox (badness 10000) in paragraph at lines 869--873 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2668] [2669] Underfull \hbox (badness 10000) in paragraph at lines 990--992 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2670] [2671] [2672] [2673] Underfull \hbox (badness 10000) in paragraph at lines 1270--1276 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2674] [2675]) (./lattice-pkg.tex [2676] Chapter 23. [2677] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2678] [2679] [2680] [2681] [2682] [2683] [2684] [2685] [2686] [2687] [2688] [2689] [2690] [2691] [2692] Underfull \hbox (badness 1062) in paragraph at lines 1398--1402 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2693] Underfull \vbox (badness 4416) has occurred while \output is active [2694] Underfull \hbox (badness 1803) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2695] [2696] [2697] Underfull \hbox (badness 3009) in paragraph at lines 1725--1727 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1755--1759 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2698] [2699] [2700] [2701] [2702] Underfull \hbox (badness 10000) in paragraph at lines 2141--2144 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2703] [2704] [2705] [2706] [2707] [2708] [2709] [2710] [2711] [2712] Underfull \hbox (badness 2781) in paragraph at lines 2849--2851 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2713] [2714] Underfull \hbox (badness 2486) in paragraph at lines 3001--3005 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2715] [2716] [2717] [2718] [2719] [2720]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.parallel}) has been already used, duplicate ign ored \relax l.3475 \aliasA{parallel}{B\_08\_splom}{parallel} [2721] [2722] [2723] [2724] [2725] [2726] [2727] [2728] Underfull \hbox (badness 5696) in paragraph at lines 3970--3974 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2729] Underfull \hbox (badness 1173) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in [2730] Underfull \hbox (badness 3219) in paragraph at lines 4136--4138 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2731] [2732] Underfull \hbox (badness 3492) in paragraph at lines 4336--4346 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , [2733] Underfull \hbox (badness 10000) in paragraph at lines 4361--4364 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4364--4366 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2734] [2735] [2736] [2737] [2738] [2739] [2740] [2741] [2742] Underfull \hbox (badness 6157) in paragraph at lines 5087--5090 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2743] [2744] [2745] [2746] [2747] [2748] [2749] Underfull \hbox (badness 10000) in paragraph at lines 5545--5548 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5545--5548 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2750] [2751] [2752] [2753] [2754] Underfull \hbox (badness 4805) in paragraph at lines 5907--5911 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 5918--5925 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 5918--5925 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 5918--5925 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2755] [2756] [2757] [2758] Underfull \hbox (badness 4242) in paragraph at lines 6218--6223 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6218--6223 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2759] [2760] Underfull \hbox (badness 2310) in paragraph at lines 6334--6339 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2761] [2762] [2763] [2764] [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \hbox (badness 3168) in paragraph at lines 7116--7120 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2772] [2773] [2774] [2775] Underfull \hbox (badness 2012) in paragraph at lines 7387--7390 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2776] [2777] Underfull \hbox (badness 3333) in paragraph at lines 7559--7561 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing [2778] [2779] [2780] Underfull \vbox (badness 10000) has occurred while \output is active [2781] [2782] [2783] Underfull \hbox (badness 1436) in paragraph at lines 7973--7979 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2784] [2785] [2786] [2787] [2788] [2789] [2790] [2791] Underfull \hbox (badness 10000) in paragraph at lines 8531--8534 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2792] Underfull \hbox (badness 1092) in paragraph at lines 8577--8579 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2793] [2794] Underfull \hbox (badness 3895) in paragraph at lines 8738--8741 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2795] Underfull \hbox (badness 1515) in paragraph at lines 8814--8818 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2796] [2797] Underfull \hbox (badness 6316) in paragraph at lines 8920--8925 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 8937--8940 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2798] [2799] [2800] [2801] Underfull \hbox (badness 1728) in paragraph at lines 9228--9232 []\T1/ptm/m/n/10 Returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2802] [2803] [2804] [2805] [2806] [2807] [2808] Underfull \hbox (badness 2310) in paragraph at lines 9692--9696 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9697--9700 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2809] [2810] [2811]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma}) has been already used, duplicate ignored \relax l.9923 \aliasA{melanoma}{H\_melanoma}{melanoma} [2812] [2813] [2814] Underfull \hbox (badness 4144) in paragraph at lines 10147--10150 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10147--10150 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2815] [2816]) (./mgcv-pkg.tex Chapter 24. [2817] [2818] [2819] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2820] [2821] [2822] [2823] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2824] [2825] [2826] [2827] [2828] [2829] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2830] [2831] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2832] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2833] Underfull \vbox (badness 10000) has occurred while \output is active [2834] [2835] [2836] [2837] [2838] [2839] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2840] [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] [2846] [2847] [2848] [2849] [2850] [2851] [2852] [2853] [2854] [2855] [2856] [2857] [2858] [2859] [2860] [2861] [2862] Underfull \hbox (badness 1142) in paragraph at lines 2592--2596 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 2618--2624 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2863] [2864] [2865] [2866] [2867] [2868] Underfull \vbox (badness 10000) has occurred while \output is active [2869] Underfull \vbox (badness 10000) has occurred while \output is active [2870] Underfull \vbox (badness 10000) has occurred while \output is active [2871] [2872] [2873] [2874] [2875] [2876] [2877] [2878] [2879] [2880] [2881] [2882] [2883] [2884] [2885] [2886] Underfull \hbox (badness 10000) in paragraph at lines 4063--4067 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2887] [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] Underfull \hbox (badness 1184) in paragraph at lines 4350--4354 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2892] [2893] [2894] [2895] [2896] [2897] [2898] [2899] [2900] [2901] [2902] [2903] Underfull \hbox (badness 1142) in paragraph at lines 5073--5077 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2904] Underfull \hbox (badness 1231) in paragraph at lines 5177--5179 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2905] [2906] [2907] Underfull \vbox (badness 10000) has occurred while \output is active [2908] [2909] [2910] [2911] Underfull \hbox (badness 2181) in paragraph at lines 5621--5622 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2912] [2913] [2914] [2915] [2916] [2917] [2918] Underfull \hbox (badness 10000) in paragraph at lines 6010--6011 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2919] [2920] [2921] [2922] [2923] [2924] [2925] [2926] [2927] [2928] [2929] Underfull \hbox (badness 1142) in paragraph at lines 6595--6599 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2930] [2931] [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] [2935] [2936] Underfull \hbox (badness 1087) in paragraph at lines 6967--6968 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2937] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939] Underfull \vbox (badness 10000) has occurred while \output is active [2940] [2941] [2942] [2943] [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] Underfull \hbox (badness 1242) in paragraph at lines 7916--7917 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2953] [2954] [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] Underfull \hbox (badness 6001) in paragraph at lines 8561--8563 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2964] [2965] [2966] [2967] [2968] [2969] [2970] [2971] [2972] [2973] Underfull \vbox (badness 10000) has occurred while \output is active [2974] [2975] Underfull \hbox (badness 1038) in paragraph at lines 9310--9313 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9310--9313 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [2976] Underfull \hbox (badness 10000) in paragraph at lines 9366--9369 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [2977] [2978] [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 1852) in paragraph at lines 10040--10043 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2988] [2989] [2990] Underfull \hbox (badness 1852) in paragraph at lines 10209--10212 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2991] [2992] Underfull \vbox (badness 10000) has occurred while \output is active [2993] [2994] Underfull \hbox (badness 1205) in paragraph at lines 10449--10451 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10449--10451 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10455--10460 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [2995] Underfull \hbox (badness 1205) in paragraph at lines 10539--10541 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10539--10541 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [2996] [2997] [2998] Underfull \hbox (badness 1253) in paragraph at lines 10738--10740 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [2999] [3000] [3001] [3002] [3003] [3004] Underfull \hbox (badness 4792) in paragraph at lines 10999--11002 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10999--11002 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3005] Underfull \hbox (badness 10000) in paragraph at lines 11106--11109 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [3006] [3007] [3008] [3009] [3010] [3011] [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] Underfull \hbox (badness 3861) in paragraph at lines 11898--11901 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3020] [3021] Underfull \hbox (badness 1320) in paragraph at lines 12013--12018 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3022] Underfull \hbox (badness 1975) in paragraph at lines 12119--12124 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3023] [3024] Underfull \hbox (badness 1762) in paragraph at lines 12208--12220 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3025] [3026] [3027] Underfull \hbox (badness 7667) in paragraph at lines 12420--12426 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3028] Underfull \hbox (badness 10000) in paragraph at lines 12461--12462 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3029] [3030] [3031] [3032] Underfull \vbox (badness 10000) has occurred while \output is active [3033] Underfull \hbox (badness 10000) in paragraph at lines 12738--12740 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3034] [3035] Underfull \hbox (badness 10000) in paragraph at lines 12868--12869 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3036] [3037] [3038] Underfull \hbox (badness 1436) in paragraph at lines 13004--13011 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3039] [3040] Underfull \hbox (badness 10000) in paragraph at lines 13103--13104 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3041] [3042] [3043] [3044] [3045] [3046] [3047] [3048] [3049] [3050] Underfull \hbox (badness 10000) in paragraph at lines 13704--13710 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13704--13710 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3051] [3052] [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] Underfull \vbox (badness 10000) has occurred while \output is active [3055] [3056] Underfull \hbox (badness 10000) in paragraph at lines 14047--14048 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3057] [3058] [3059] [3060] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14259--14259 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3061] [3062] Underfull \hbox (badness 3895) in paragraph at lines 14405--14408 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3063] Underfull \hbox (badness 10000) in paragraph at lines 14450--14452 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3064] [3065] [3066] [3067] [3068] Underfull \hbox (badness 1371) in paragraph at lines 14730--14736 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14741--14743 []\T1/zi4/m/it/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14741--14743 [][][]\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3069] Underfull \hbox (badness 10000) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3070] [3071] [3072] [3073] Underfull \hbox (badness 2326) in paragraph at lines 14976--14983 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3074] Underfull \hbox (badness 2158) in paragraph at lines 15061--15061 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3075] [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] [3091] [3092] [3093] [3094] [3095] [3096] [3097] [3098] [3099] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16623--16623 []\T1/zi4/m/it/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3100] [3101] Underfull \hbox (badness 1796) in paragraph at lines 16736--16739 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3102] [3103] [3104] [3105] Underfull \vbox (badness 10000) has occurred while \output is active [3106] [3107] [3108] [3109] [3110] [3111]) (./nlme-pkg.tex [3112] Chapter 25. [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] [3135] [3136] [3137] [3138] [3139] [3140] [3141] [3142] [3143] [3144] [3145] [3146] Underfull \hbox (badness 10000) in paragraph at lines 2258--2264 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161pdfTeX warning (ext4): destination with the same iden tifier (name{Rfn.corMatrix.corCompSymm}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.3194 ] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] Underfull \hbox (badness 1067) in paragraph at lines 4419--4424 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3180] [3181] [3182] [3183] [3184] [3185] [3186] [3187] [3188] [3189] [3190] [3191] Underfull \hbox (badness 10000) in paragraph at lines 5165--5169 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3192] [3193] [3194] [3195] [3196] [3197] [3198] Underfull \hbox (badness 10000) in paragraph at lines 5597--5600 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3199] [3200] [3201] [3202] [3203] [3204] [3205] Underfull \hbox (badness 10000) in paragraph at lines 5978--5983 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3206] [3207] [3208] [3209] Underfull \hbox (badness 1490) in paragraph at lines 6253--6264 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3210] Underfull \hbox (badness 10000) in paragraph at lines 6317--6319 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3211] [3212] [3213] [3214] [3215] [3216] Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3217] [3218] [3219] [3220] Underfull \hbox (badness 10000) in paragraph at lines 7002--7009 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3221] [3222] [3223] [3224] Underfull \hbox (badness 10000) in paragraph at lines 7262--7267 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3225] [3226] [3227] [3228] [3229] [3230] [3231] [3232] [3233] [3234] [3235] [3236] [3237] [3238] [3239] [3240] [3241] [3242] [3243] Underfull \hbox (badness 10000) in paragraph at lines 8535--8537 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3244] [3245] [3246] [3247] [3248] Underfull \hbox (badness 10000) in paragraph at lines 8814--8821 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3249] [3250] [3251] [3252] [3253] [3254] [3255] [3256] Underfull \hbox (badness 10000) in paragraph at lines 9336--9343 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3257] [3258] [3259] [3260] [3261]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9698 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.Matrix.1}) has been already used, dupl icate ignored \relax l.9698 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3262] [3263] [3264] [3265] [3266] [3267] [3268] [3269] [3270] [3271] [3272] [3273] Underfull \hbox (badness 1596) in paragraph at lines 10471--10497 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3274] [3275] Underfull \hbox (badness 1490) in paragraph at lines 10609--10615 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3276] [3277] [3278] [3279] Underfull \hbox (badness 10000) in paragraph at lines 10850--10852 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3280] [3281] [3282] [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] [3291] [3292] [3293] [3294] [3295] [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] [3310] [3311] [3312] [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] Underfull \hbox (badness 1286) in paragraph at lines 13747--13754 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330] [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342]pdfTeX war ning (ext4): destination with the same identifier (name{Rfn.random.effects}) ha s been already used, duplicate ignored \relax l.15190 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.random.effects.1}) has been already us ed, duplicate ignored \relax l.15190 ...Extract Random Effects}{random.effects} [3343] [3344] [3345] [3346] [3347] [3348] [3349] [3350] [3351] [3352] Underfull \hbox (badness 3884) in paragraph at lines 15830--15834 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15830--15834 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15830--15834 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3353] [3354] Underfull \hbox (badness 1067) in paragraph at lines 15942--15947 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3355] [3356] [3357] [3358] Underfull \hbox (badness 1448) in paragraph at lines 16185--16194 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] Underfull \hbox (badness 1728) in paragraph at lines 16889--16892 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3369] [3370] [3371] [3372] [3373] Underfull \hbox (badness 8056) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3374] [3375] [3376] [3377] [3378] Underfull \hbox (badness 10000) in paragraph at lines 17545--17553 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] [3387] [3388] Underfull \hbox (badness 10000) in paragraph at lines 18255--18265 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18255--18265 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3389] [3390] [3391] [3392] [3393] Underfull \hbox (badness 5036) in paragraph at lines 18579--18588 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] [3403] [3404] [3405] [3406]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.multinom.1}) has been already used, du plicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3407] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3408] [3409] [3410] [3411] [3412] [3413] [3414]) (./rpart-pkg.tex Chapter 27. [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/it/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/it/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/it/10 n \T1/ptm/m/n/10 for [3425] [3426] [3427] [3428] [3429] [3430] [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440] [3441] [3442] [3443]) (./spatial-pkg.tex [3444] Chapter 28. [3445] [3446] [3447] [3448] [3449] [3450] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] [3459] [3460] [3461] [3462] [3463]) (./survival-pkg.tex [3464] Chapter 29. [3465] [3466] [3467] [3468] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3469] [3470]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.aml.1}) has been already used, duplica te ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3471] [3472] [3473] [3474] [3475] [3476] [3477] [3478] [3479] [3480] [3481] Underfull \hbox (badness 1097) in paragraph at lines 1106--1108 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3482] [3483] [3484]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) has been already used, duplicate ignored \relax l.1308 ...erapy for Stage B/C colon cancer}{colon} Underfull \vbox (badness 10000) has occurred while \output is active [3485] Underfull \hbox (badness 3679) in paragraph at lines 1356--1360 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] Underfull \hbox (badness 3250) in paragraph at lines 1964--1979 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 1964--1979 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3494] [3495] [3496] [3497] [3498] [3499] [3500] [3501] [3502] [3503] [3504] [3505] [3506] [3507] [3508] [3509] [3510] Underfull \vbox (badness 10000) has occurred while \output is active [3511] [3512] [3513] Underfull \hbox (badness 1389) in paragraph at lines 3366--3368 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3514] [3515] [3516] [3517] Overfull \hbox (467.89665pt too wide) in alignment at lines 3652--3652 [] [] Underfull \vbox (badness 10000) has occurred while \output is active [3518] Overfull \vbox (8.56093pt too high) has occurred while \output is active [3519] [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] [3531] Underfull \vbox (badness 1629) has occurred while \output is active [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] [3543] Underfull \hbox (badness 5274) in paragraph at lines 5386--5388 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3544] [3545] [3546] [3547] [3548] [3549] [3550] [3551] [3552] [3553] [3554] [3555] [3556] [3557] [3558] [3559] [3560] [3561] Underfull \hbox (badness 1281) in paragraph at lines 6654--6657 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570]pdfTeX warning (e xt4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7224 ...ata from a soldering experiment}{solder} [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] Underfull \hbox (badness 1038) in paragraph at lines 8722--8728 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3592] [3593] [3594] [3595] [3596] Underfull \hbox (badness 10000) in paragraph at lines 9080--9085 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3597] [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] [3606] [3607] [3608] Underfull \hbox (badness 1354) in paragraph at lines 10020--10024 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. 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coerce,atomicVector,sparseVector-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8178--8180 []\T1/zi4/m/it/10 coerce,CHMfactor,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8182--8184 []\T1/zi4/m/it/10 coerce,CsparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8184--8186 []\T1/zi4/m/it/10 coerce,CsparseMatrix,generalMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8188--8190 []\T1/zi4/m/it/10 coerce,CsparseMatrix,packedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8190--8192 []\T1/zi4/m/it/10 coerce,CsparseMatrix,RsparseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8192--8194 []\T1/zi4/m/it/10 coerce,CsparseMatrix,sparseVector-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8194--8196 []\T1/zi4/m/it/10 coerce,CsparseMatrix,TsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 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paragraph at lines 8422--8424 []\T1/zi4/m/it/10 coerce,dsparseMatrix,nsparseMatrix-method [3697] [3698] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8614--8616 []\T1/zi4/m/it/10 coerce,indMatrix,diagonalMatrix-method [3699] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8648--8650 []\T1/zi4/m/it/10 coerce,indMatrix,unpackedMatrix-method [3700] Overfull \hbox (15.8567pt too wide) in paragraph at lines 8782--8784 []\T1/zi4/m/it/10 coerce,lsparseMatrix,dsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8786--8788 []\T1/zi4/m/it/10 coerce,lsparseMatrix,nsparseMatrix-method [3701] [3702] [3703] Overfull \hbox (0.8567pt too wide) in paragraph at lines 9120--9122 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9128--9130 []\T1/zi4/m/it/10 coerce,matrix.coo,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9132--9134 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9134--9136 []\T1/zi4/m/it/10 coerce,matrix.csc,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9140--9142 []\T1/zi4/m/it/10 coerce,matrix.csc,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9144--9146 []\T1/zi4/m/it/10 coerce,matrix.csc,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9146--9148 []\T1/zi4/m/it/10 coerce,matrix.csr,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9154--9156 []\T1/zi4/m/it/10 coerce,matrix.csr,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9158--9160 []\T1/zi4/m/it/10 coerce,matrix.csr,TsparseMatrix-method [3704] Overfull \hbox (15.8567pt too wide) in paragraph at lines 9260--9262 []\T1/zi4/m/it/10 coerce,nsparseMatrix,dsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 9266--9268 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crossprod,CsparseMatrix,CsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10278--10280 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,ddenseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 10280--10282 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,diagonalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10284--10286 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,missing-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10286--10288 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,numLike-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10288--10290 []\T1/zi4/m/it/10 crossprod,ddenseMatrix,CsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 10290--10292 []\T1/zi4/m/it/10 crossprod,ddenseMatrix,ddenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10292--10294 []\T1/zi4/m/it/10 crossprod,ddenseMatrix,dgCMatrix-method Overfull \hbox (25.8567pt too wide) in 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crossprod,diagonalMatrix,matrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10324--10326 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,missing-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 10326--10328 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,sparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10328--10330 []\T1/zi4/m/it/10 crossprod,dsparseMatrix,ddenseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 10330--10332 []\T1/zi4/m/it/10 crossprod,dsparseMatrix,dgeMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10332--10334 []\T1/zi4/m/it/10 crossprod,dtpMatrix,ddenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10336--10338 []\T1/zi4/m/it/10 crossprod,dtrMatrix,ddenseMatrix-method [3712] Overfull \hbox (20.8567pt too wide) in paragraph at lines 10350--10352 []\T1/zi4/m/it/10 crossprod,ldenseMatrix,ddenseMatrix-method Overfull \hbox (20.8567pt too wide) in 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\T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10554--10556 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ps.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10562--10564 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3714] [3715] Overfull \hbox (15.8567pt too wide) in paragraph at lines 10919--10921 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 10939--10941 []\T1/zi4/m/it/10 determinant,MatrixFactorization,missing-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10943--10945 []\T1/zi4/m/it/10 determinant,triangularMatrix,logical-method [3716] [3717] [3718] Overfull \hbox (15.01662pt too wide) in paragraph at lines 11626--11628 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3719] [3720] [3721] [3722] Overfull \hbox (35.8567pt too wide) in paragraph at lines 12513--12515 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 12515--12517 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 12517--12519 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,character-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 12519--12521 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,missing-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 12521--12523 []\T1/zi4/m/it/10 forceSymmetric,indMatrix,character-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 12523--12525 []\T1/zi4/m/it/10 forceSymmetric,indMatrix,missing-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 12525--12527 []\T1/zi4/m/it/10 forceSymmetric,matrix,character-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 12529--12531 []\T1/zi4/m/it/10 forceSymmetric,packedMatrix,character-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 12531--12533 []\T1/zi4/m/it/10 forceSymmetric,packedMatrix,missing-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 12533--12535 []\T1/zi4/m/it/10 forceSymmetric,RsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 12535--12537 []\T1/zi4/m/it/10 forceSymmetric,RsparseMatrix,missing-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 12537--12539 []\T1/zi4/m/it/10 forceSymmetric,TsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 12539--12541 []\T1/zi4/m/it/10 forceSymmetric,TsparseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 12541--12543 []\T1/zi4/m/it/10 forceSymmetric,unpackedMatrix,character-method Overfull \hbox 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 330--333 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 569--575 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [23] [24] [25] Underfull \hbox (badness 10000) in paragraph at lines 1581--1587 [26] [27] [28] [29] [30] [31] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2059--2059 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] Underfull \hbox (badness 1721) in paragraph at lines 2716--2720 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] Underfull \vbox (badness 10000) has occurred while \output is active [52] [53] [54] [55] [56] [57] [58] Underfull \hbox (badness 10000) in paragraph at lines 3897--3899 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 2521) in paragraph at lines 5192--5194 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6383--6383 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] Underfull \hbox (badness 1303) in paragraph at lines 7276--7283 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2111) in paragraph at lines 7287--7292 []\T1/ptm/m/n/10 Unix users wish-ing to \T1/ptm/m/it/10 write \T1/ptm/m/n/10 to one of the X11 se-lec-tions may be able to do so via [106] [107] Underfull \vbox (badness 10000) has occurred while \output is active [108] [109] [110] [111] [112] [113] [114] [115] Underfull \hbox (badness 2096) in paragraph at lines 7957--7961 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [116] Underfull \hbox (badness 2351) in paragraph at lines 8071--8074 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [117] [118] [119] [120] [121] Underfull \hbox (badness 4479) in paragraph at lines 8388--8399 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [122] [123] [124] [125] [126] [127] Underfull \hbox (badness 1629) in paragraph at lines 8842--8854 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 8842--8854 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] Underfull \hbox (badness 1178) in paragraph at lines 9595--9599 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] Underfull \hbox (badness 2744) in paragraph at lines 11904--11906 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] Underfull \hbox (badness 2253) in paragraph at lines 14100--14102 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [201] Underfull \hbox (badness 1490) in paragraph at lines 14135--14138 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [202] Underfull \hbox (badness 1565) in paragraph at lines 14217--14221 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [203] Underfull \hbox (badness 4927) in paragraph at lines 14268--14270 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [204] Underfull \hbox (badness 3148) in paragraph at lines 14370--14375 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . 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For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [206] Underfull \hbox (badness 10000) in paragraph at lines 14548--14552 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14559--14562 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [207] [208] [209] [210] [211] Underfull \hbox (badness 3965) in paragraph at lines 14856--14860 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] Underfull \hbox (badness 4429) in paragraph at lines 15645--15648 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 15751--15753 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [225] Underfull \hbox (badness 2035) in paragraph at lines 15824--15828 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [226] [227] [228] [229] [230] [231] [232] [233] [234] Underfull \hbox (badness 2452) in paragraph at lines 16437--16441 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16437--16441 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [235] [236] Underfull \hbox (badness 1092) in paragraph at lines 16610--16615 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [237] [238] [239] [240] Underfull \hbox (badness 6741) in paragraph at lines 16863--16867 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [241] [242] [243] Underfull \vbox (badness 10000) has occurred while \output is active [244] [245] [246] [247] [248] [249] [250] Underfull \vbox (badness 10000) has occurred while \output is active [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] Underfull \hbox (badness 1478) in paragraph at lines 18315--18318 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [261] [262] [263] [264] Underfull \hbox (badness 10000) in paragraph at lines 18587--18589 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 18593--18602 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [265] [266] [267] [268] [269] [270] [271] [272] Underfull \hbox (badness 1442) in paragraph at lines 19201--19203 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [273] [274] [275] [276] [277] Underfull \hbox (badness 10000) in paragraph at lines 19532--19538 [278] [279] [280] Underfull \hbox (badness 1248) in paragraph at lines 19777--19780 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [281] [282] [283] [284] [285] Underfull \hbox (badness 4739) in paragraph at lines 20040--20042 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [286] [287] [288] Underfull \hbox (badness 1603) in paragraph at lines 20267--20270 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [289] [290] [291] [292] [293] [294] [295] [296] [297] [298] [299] [300] [301] Underfull \hbox (badness 2469) in paragraph at lines 21124--21129 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [302] Underfull \hbox (badness 1675) in paragraph at lines 21212--21221 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21222--21237 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [303] Underfull \hbox (badness 10000) in paragraph at lines 21272--21275 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21272--21275 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [304] [305] Underfull \hbox (badness 1014) in paragraph at lines 21406--21411 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [306] [307] [308] [309] [310] [311] [312] [313] [314] [315] [316] [317] Underfull \hbox (badness 1264) in paragraph at lines 22255--22263 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [318] Underfull \hbox (badness 4441) in paragraph at lines 22289--22292 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] [329] Underfull \hbox (badness 5231) in paragraph at lines 23086--23088 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] [341] [342] [343] [344] [345] Underfull \hbox (badness 10000) in paragraph at lines 24179--24185 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24179--24185 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [346] [347] [348] [349] [350] [351] [352] Underfull \hbox (badness 2790) in paragraph at lines 24676--24679 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 24676--24679 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [353] [354] [355] [356] [357] Underfull \hbox (badness 1194) in paragraph at lines 24999--25002 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [358] [359] [360] Underfull \hbox (badness 2368) in paragraph at lines 25206--25212 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [361] [362] [363] [364] [365] Underfull \hbox (badness 10000) in paragraph at lines 25596--25599 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [366] [367] [368] [369] [370] [371] [372] [373] [374] Underfull \hbox (badness 10000) in paragraph at lines 26217--26219 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 1881) in paragraph at lines 27112--27115 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27137--27139 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [388] [389] Underfull \hbox (badness 2142) in paragraph at lines 27278--27282 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27335--27340 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [390] [391] [392] Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 27629--27635 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by [393] Underfull \hbox (badness 10000) in paragraph at lines 27642--27645 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 27668--27670 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 27710--27715 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 27716--27727 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 27716--27727 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 27728--27731 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [394] [395] [396] [397] [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] Underfull \hbox (badness 10000) in paragraph at lines 28128--28132 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [400] [401] Underfull \hbox (badness 10000) in paragraph at lines 28275--28278 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [402] Underfull \hbox (badness 7925) in paragraph at lines 28356--28360 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28356--28360 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28361--28370 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [403] [404] [405] [406] [407] [408] [409] [410] [411] [412] [413] [414] [415] [416] Underfull \hbox (badness 2726) in paragraph at lines 29357--29360 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] Underfull \hbox (badness 1603) in paragraph at lines 30107--30110 []\T1/ptm/m/n/10 LAPACK and LIN-PACK are from [][]$\T1/zi4/m/n/10 https : / / w ww . netlib . org / lapack/$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / www . [429] [430] [431] [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] [437] [438] [439] [440] [441] [442] Underfull \hbox (badness 1533) in paragraph at lines 31144--31147 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [443] [444] Underfull \hbox (badness 1163) in paragraph at lines 31307--31318 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [445] [446] [447] [448] [449] [450] [451] [452] [453] [454] [455] Underfull \vbox (badness 10000) has occurred while \output is active [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] Underfull \hbox (badness 10000) in paragraph at lines 32971--32975 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 32971--32975 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. [469] Underfull \hbox (badness 3557) in paragraph at lines 32992--32994 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 32995--32999 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [470] [471] [472] [473] [474] [475] [476] [477] Underfull \hbox (badness 1655) in paragraph at lines 33589--33591 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [478] [479] [480] [481] [482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493] [494] [495] Underfull \hbox (badness 2261) in paragraph at lines 34795--34800 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] [510] Underfull \hbox (badness 10000) in paragraph at lines 35915--35926 \T1/zi4/m/n/10 / / docs . microsoft . com / en-[]us / cpp / c-[]language / pars ing-[]c-[]command-[]line-[]arguments ? [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] [532] Underfull \hbox (badness 10000) in paragraph at lines 37446--37448 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [533] [534] [535] [536] [537] [538] Underfull \hbox (badness 2913) in paragraph at lines 37866--37870 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [539] [540] [541] Underfull \hbox (badness 1072) in paragraph at lines 38112--38116 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38117--38121 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [542] Underfull \hbox (badness 10000) in paragraph at lines 38157--38163 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38157--38163 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38157--38163 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38172--38179 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38172--38179 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [543] [544] [545] Underfull \hbox (badness 2644) in paragraph at lines 38407--38411 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [546] [547] Underfull \hbox (badness 1142) in paragraph at lines 38560--38566 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [548] [549] [550] [551] [552] [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] Underfull \hbox (badness 1158) in paragraph at lines 39866--39868 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [567] [568] [569] [570] [571] [572] [573] [574] [575] Underfull \hbox (badness 1137) in paragraph at lines 40457--40463 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails [576] Underfull \hbox (badness 4967) in paragraph at lines 40476--40481 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [577] Underfull \hbox (badness 1616) in paragraph at lines 40596--40601 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [578] [579] [580] [581] [582] [583] [584] [585] [586] Underfull \hbox (badness 1472) in paragraph at lines 41143--41146 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [587] [588] [589] [590] [591] [592] [593] [594] [595] [596] [597] [598] [599] Underfull \hbox (badness 10000) in paragraph at lines 42069--42073 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [600] [601] [602] [603] Underfull \hbox (badness 10000) in paragraph at lines 42320--42323 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [604] [605] [606] Underfull \hbox (badness 10000) in paragraph at lines 42504--42508 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [607] [608] [609] [610] [611] [612] [613] [614] Underfull \hbox (badness 10000) in paragraph at lines 43143--43146 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626] [627] Underfull \hbox (badness 1990) in paragraph at lines 44065--44073 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 44065--44073 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638] [639] [640] [641] Underfull \hbox (badness 2452) in paragraph at lines 45034--45040 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [642] [643] [644] [645] [646] [647] Underfull \hbox (badness 3668) in paragraph at lines 45432--45434 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [648] Underfull \hbox (badness 2401) in paragraph at lines 45562--45566 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [649] [650] [651] [652] Underfull \hbox (badness 2111) in paragraph at lines 45770--45775 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [653] [654] [655] Underfull \hbox (badness 4001) in paragraph at lines 46016--46018 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [656] [657] [658] [659] [660] Underfull \hbox (badness 5417) in paragraph at lines 46381--46385 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [661] Underfull \hbox (badness 10000) in paragraph at lines 46442--46446 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [662]) (./compiler-pkg.tex Chapter 2. [663] [664] [665] [666]) (./datasets-pkg.tex Chapter 3. [667] [668] [669] [670] [671] [672] Underfull \vbox (badness 1472) has occurred while \output is active [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Overfull \vbox (4.26088pt too high) has occurred while \output is active [704] [705] [706] [707] [708] [709] Overfull \vbox (13.87083pt too high) has occurred while \output is active [710] Underfull \vbox (badness 2376) has occurred while \output is active [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] Overfull \vbox (10.49593pt too high) has occurred while \output is active [727] Overfull \vbox (15.49593pt too high) has occurred while \output is active [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742]) (./grDevices-pkg.tex Chapter 4. [743] [744] [745] [746] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [747] [748] [749] [750] [751] [752] [753] [754] [755] Underfull \hbox (badness 1424) in paragraph at lines 898--900 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [756] [757] [758] [759] [760] Underfull \hbox (badness 5175) in paragraph at lines 1192--1194 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [761] [762] Underfull \hbox (badness 2512) in paragraph at lines 1311--1313 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [763] [764] [765] [766] Underfull \hbox (badness 1490) in paragraph at lines 1611--1616 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1624--1628 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [767] [768] [769] [770] [771] [772] Underfull \hbox (badness 1325) in paragraph at lines 2038--2048 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [773] [774] Underfull \hbox (badness 10000) in paragraph at lines 2150--2152 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [775] [776] Underfull \hbox (badness 6758) in paragraph at lines 2329--2332 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [777] [778] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] [782] [783] [784] [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2940--2941 Underfull \vbox (badness 10000) has occurred while \output is active [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] Underfull \vbox (badness 10000) has occurred while \output is active [802] Underfull \hbox (badness 10000) in paragraph at lines 4016--4019 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] Underfull \vbox (badness 10000) has occurred while \output is active [814] [815] Underfull \hbox (badness 1584) in paragraph at lines 4910--4912 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 4914--4921 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [816] [817] [818] [819] Underfull \hbox (badness 1377) in paragraph at lines 5220--5225 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [820] Underfull \hbox (badness 1418) in paragraph at lines 5296--5303 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5314--5316 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [821] Underfull \hbox (badness 1377) in paragraph at lines 5425--5430 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [822] Underfull \hbox (badness 7344) in paragraph at lines 5494--5496 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [823] [824] Underfull \hbox (badness 2035) in paragraph at lines 5632--5641 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5632--5641 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5632--5641 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [825] [826] Underfull \hbox (badness 10000) in paragraph at lines 5700--5702 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / [827] [828] Underfull \hbox (badness 1546) in paragraph at lines 5844--5852 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] [836] Underfull \hbox (badness 10000) in paragraph at lines 6382--6385 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [837] [838] [839] [840] [841] [842] [843] [844] [845] [846] [847] [848] Underfull \hbox (badness 1189) in paragraph at lines 7211--7213 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [849] Underfull \hbox (badness 10000) in paragraph at lines 7316--7318 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [850] [851] [852] [853] [854] Underfull \hbox (badness 3780) in paragraph at lines 7630--7636 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [855] [856] [857] [858] [859]) (./graphics-pkg.tex [860] Chapter 5. [861] [862] [863] [864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875] Overfull \hbox (12.71341pt too wide) in paragraph at lines 983--983 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] Underfull \hbox (badness 4634) in paragraph at lines 1357--1360 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [882] [883] [884] [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] Underfull \hbox (badness 1728) in paragraph at lines 2335--2337 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [897] Underfull \hbox (badness 1009) in paragraph at lines 2428--2435 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] Underfull \vbox (badness 10000) has occurred while \output is active [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] Underfull \hbox (badness 3229) in paragraph at lines 4652--4657 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [932] [933] [934] [935] [936] Underfull \hbox (badness 1107) in paragraph at lines 5081--5087 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [937] Underfull \hbox (badness 10000) in paragraph at lines 5210--5213 [938] Underfull \hbox (badness 10000) in paragraph at lines 5271--5273 [939 ] [940 ] [941] [942] [943] [944] [945] [946] [947] [948]pdfTeX warning (ext4): destinati on with the same identifier (name{Rfn.plot}) has been already used, duplicate i gnored \relax l.5943 \aliasA{plot}{plot.default}{plot} [949] [950] [951] [952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6848--6849 [][] [963 ] [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] Underfull \hbox (badness 4954) in paragraph at lines 8936--8938 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 8938--8940 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [995]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.unit s}) has been already used, duplicate ignored \relax l.9018 \HeaderA{units}{Graphical Units}{units} [996] [997] [998] [999]) (./grid-pkg.tex [1000] Chapter 6. [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1019] Underfull \vbox (badness 10000) has occurred while \output is active [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) in paragraph at lines 3041--3043 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] Underfull \vbox (badness 10000) has occurred while \output is active [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] Underfull \hbox (badness 1067) in paragraph at lines 4761--4764 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1075] [1076] [1077] [1078] [1079] [1080] Underfull \hbox (badness 7256) in paragraph at lines 5112--5114 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \hbox (badness 2142) in paragraph at lines 5561--5565 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1088] Underfull \hbox (badness 4699) in paragraph at lines 5632--5637 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118]) (./methods-pkg.tex Chapter 7. [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] Underfull \vbox (badness 10000) has occurred while \output is active [1127] Underfull \vbox (badness 10000) has occurred while \output is active [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1145] [1146] [1147] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1153] [1154] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1155] [1156] [1157] [1158] [1159] [1160] [1161] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1162] [1163] [1164] [1165] [1166] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1169] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1178] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] Underfull \vbox (badness 10000) has occurred while \output is active [1187] Underfull \vbox (badness 10000) has occurred while \output is active [1188] [1189] [1190] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1191] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1192] [1193] [1194] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1203] [1204] [1205] [1206] Underfull \vbox (badness 10000) has occurred while \output is active [1207] [1208] [1209]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1210] [1211] [1212]pdfTeX warning (ext4): desti nation with the same identifier (name{Rfn.Complex}) has been already used, dupl icate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destinat ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) has been already used, duplicate igno red \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination wi th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor ed \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1213] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1214] [1215] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1256] [1257] [1258]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1259] [1260] [1261] [1262] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] Underfull \hbox (badness 3386) in paragraph at lines 1402--1405 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1279] [1280] [1281]) (./splines-pkg.tex [1282] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] [1295] [1296]) (./stats-pkg.tex Chapter 10. [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] Underfull \hbox (badness 1412) in paragraph at lines 887--889 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1310] [1311] [1312] [1313] [1314] [1315] [1316] Underfull \hbox (badness 2503) in paragraph at lines 1369--1372 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] Underfull \hbox (badness 2503) in paragraph at lines 3530--3533 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1349] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3642. [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] Underfull \hbox (badness 3989) in paragraph at lines 4787--4794 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2556) in paragraph at lines 5424--5427 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1377] [1378] [1379] [1380] [1381] [1382] Underfull \hbox (badness 2503) in paragraph at lines 5838--5842 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] Underfull \hbox (badness 7081) in paragraph at lines 6632--6635 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6636--6638 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1395] Underfull \vbox (badness 10000) has occurred while \output is active [1396] [1397] [1398] [1399] Underfull \vbox (badness 10000) has occurred while \output is active [1400] [1401] [1402] [1403] [1404] [1405] [1406] Underfull \hbox (badness 10000) in paragraph at lines 7493--7496 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428] [1429] [1430] [1431] [1432] Underfull \hbox (badness 2626) in paragraph at lines 9185--9188 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1433] [1434] Underfull \hbox (badness 2503) in paragraph at lines 9292--9296 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] Underfull \hbox (badness 4518) in paragraph at lines 10644--10649 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1454] [1455] [1456] [1457] [1458] Underfull \hbox (badness 2142) in paragraph at lines 11005--11008 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11024--11027 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1459] Underfull \hbox (badness 1708) in paragraph at lines 11086--11090 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1460] [1461] [1462] [1463] [1464] Underfull \hbox (badness 1694) in paragraph at lines 11482--11485 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472]pdfTeX warning (ext4): d estination with the same identifier (name{Rfn.hat}) has been already used, dupl icate ignored \relax l.11963 \aliasA{hat}{influence.measures}{hat} [1473] [1474] Underfull \hbox (badness 1484) in paragraph at lines 12105--12107 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] Underfull \hbox (badness 10000) in paragraph at lines 12707--12709 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1484] [1485] [1486] [1487] [1488] Underfull \hbox (badness 2894) in paragraph at lines 13043--13047 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1489] [1490] [1491] [1492] [1493] [1494] Underfull \hbox (badness 1496) in paragraph at lines 13457--13463 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1495] [1496] [1497] [1498] [1499] [1500] Underfull \hbox (badness 4518) in paragraph at lines 13855--13860 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] Underfull \hbox (badness 4518) in paragraph at lines 14522--14527 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1511] [1512] Underfull \hbox (badness 6412) in paragraph at lines 14660--14664 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14667--14669 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] [1527] [1528] Underfull \hbox (badness 2503) in paragraph at lines 15743--15747 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1529] [1530] [1531] [1532] [1533] [1534] [1535] Underfull \hbox (badness 10000) in paragraph at lines 16253--16259 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16253--16259 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 1158) in paragraph at lines 17906--17909 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1561] [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1377) in paragraph at lines 18933--18938 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on [1576] Underfull \hbox (badness 1735) in paragraph at lines 18938--18941 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18951--18955 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18951--18955 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 18959--18963 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1577] [1578] [1579] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19184--19184 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19187--19187 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1580] [1581] [1582] [1583] [1584] [1585] [1586] Underfull \hbox (badness 1337) in paragraph at lines 19646--19649 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1587] [1588] [1589] [1590] [1591] [1592] [1593] [1594] Underfull \hbox (badness 10000) in paragraph at lines 20117--20123 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1595] [1596] [1597] [1598] [1599] Underfull \hbox (badness 1194) in paragraph at lines 20447--20450 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1600] [1601] [1602] [1603] [1604] [1605] Underfull \hbox (badness 2503) in paragraph at lines 20826--20829 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1606] Underfull \hbox (badness 3919) in paragraph at lines 20853--20855 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1607] [1608] [1609] [1610] [1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 10000) in paragraph at lines 21932--21938 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] Underfull \hbox (badness 1337) in paragraph at lines 23289--23295 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1644] [1645] [1646] [1647] [1648] [1649] [1650] Underfull \hbox (badness 1436) in paragraph at lines 23714--23717 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1651] [1652] Underfull \hbox (badness 10000) in paragraph at lines 23855--23856 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] [1666] Underfull \hbox (badness 1824) in paragraph at lines 24827--24833 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24827--24833 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 24848--24851 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675] Underfull \hbox (badness 2165) in paragraph at lines 25429--25434 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1676] [1677] [1678] [1679] Underfull \hbox (badness 1867) in paragraph at lines 25638--25640 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25653--25657 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701] [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \hbox (badness 3514) in paragraph at lines 27301--27306 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1704] [1705] [1706] [1707] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27535--27535 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1708] Underfull \hbox (badness 3514) in paragraph at lines 27571--27577 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1709] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27628--27628 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27630--27630 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1710] [1711] Underfull \hbox (badness 3514) in paragraph at lines 27804--27809 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1712] [1713] Underfull \hbox (badness 3514) in paragraph at lines 27891--27896 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1714] Underfull \hbox (badness 3514) in paragraph at lines 27956--27961 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1715] Underfull \hbox (badness 3514) in paragraph at lines 28050--28055 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1716] [1717] Underfull \hbox (badness 6691) in paragraph at lines 28142--28147 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] Underfull \hbox (badness 4024) in paragraph at lines 28633--28636 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] Underfull \hbox (badness 5431) in paragraph at lines 29239--29241 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1735] [1736] [1737] [1738] Underfull \hbox (badness 5431) in paragraph at lines 29449--29452 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1739] [1740] [1741] [1742] [1743] Underfull \hbox (badness 1337) in paragraph at lines 29764--29768 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1744] [1745] [1746] [1747] Underfull \hbox (badness 1616) in paragraph at lines 30082--30085 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1748] [1749] [1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] [1765] Underfull \hbox (badness 3557) in paragraph at lines 31217--31221 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1766] [1767] Underfull \vbox (badness 10000) has occurred while \output is active [1768] [1769] [1770] Underfull \hbox (badness 1337) in paragraph at lines 31581--31585 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1771] [1772] [1773] [1774] [1775] [1776] [1777] [1778] Underfull \hbox (badness 1337) in paragraph at lines 32110--32114 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1779] [1780] [1781] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32317--32317 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1782] [1783] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32478--32478 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1784] [1785] [1786] [1787] [1788]) (./stats4-pkg.tex Chapter 11. [1789] [1790] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] [1793] [1794] [1795] [1796]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.show.Rdash.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1797] [1798] [1799]) (./tcltk-pkg.tex [1800] Chapter 12. [1801] [1802] [1803] [1804] [1805] [1806] [1807] Underfull \vbox (badness 10000) has occurred while \output is active [1808] Underfull \hbox (badness 1546) in paragraph at lines 666--673 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820]) (./tools-pkg.tex Chapter 13. [1821] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1822] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1823] [1824] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1825] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1826] [1827] Underfull \hbox (badness 1142) in paragraph at lines 463--467 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1828] [1829] [1830] [1831] [1832] Overfull \vbox (7.18602pt too high) has occurred while \output is active [1833] [1834] [1835] [1836] [1837] [1838] Underfull \hbox (badness 1014) in paragraph at lines 1174--1176 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1180--1182 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous Underfull \hbox (badness 10000) in paragraph at lines 1217--1220 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1217--1220 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1839] [1840] [1841] [1842] [1843] Underfull \hbox (badness 2293) in paragraph at lines 1569--1571 []\T1/zi4/m/n/10 CRAN_memtest_notes() []\T1/ptm/m/n/10 is now dep-re-cated, wit h its func-tion-al-ity in-te-grated into that of [1844] Underfull \hbox (badness 10000) in paragraph at lines 1595--1598 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1845] [1846] Underfull \hbox (badness 4096) in paragraph at lines 1714--1722 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1724--1726 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1847] [1848] [1849]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1926 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ig nored \relax l.1927 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1850] [1851] [1852] [1853] Overfull \hbox (8.25941pt too wide) in paragraph at lines 2230--2230 [] \T1/zi4/m/n/9 r"(\newcommand{\Rlogo}{\if{html}{\figure{Rlogo.svg}{option s: width=100 alt="R logo"}})",[] [1854] [1855] [1856] Underfull \hbox (badness 4096) in paragraph at lines 2399--2407 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1857] [1858] [1859] [1860] [1861] [1862] [1863] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2893. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2894. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 2894. [1864] [1865] [1866] [1867] Underfull \hbox (badness 1424) in paragraph at lines 3196--3198 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] Underfull \hbox (badness 10000) in paragraph at lines 3902--3904 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 4041--4044 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1881] [1882] [1883] [1884] [1885] Underfull \hbox (badness 1796) in paragraph at lines 4399--4404 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1886] Underfull \hbox (badness 4699) in paragraph at lines 4449--4453 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4449--4453 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from Underfull \hbox (badness 1838) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4477--4483 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1887] [1888] [1889] [1890] Underfull \hbox (badness 2197) in paragraph at lines 4750--4760 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1891] Underfull \hbox (badness 1571) in paragraph at lines 4816--4820 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1892] [1893] [1894] [1895]) (./utils-pkg.tex [1896] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] Underfull \hbox (badness 10000) in paragraph at lines 726--732 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 726--732 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1907] [1908] [1909] Underfull \hbox (badness 3861) in paragraph at lines 931--936 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1910] [1911] [1912] Underfull \hbox (badness 3323) in paragraph at lines 1115--1123 []\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use []\T1/zi4/m/it /10 bibtex = T|F []\T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m $\T1/ptm/m/n/10 , in-di-cat- Underfull \hbox (badness 2961) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f or-mat- Underfull \hbox (badness 3919) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is Underfull \hbox (badness 2875) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 taken as [][][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex. max", 1) []\T1/ptm/m/n/10 which is []\T1/zi4/m/it/10 1 []\T1/ptm/m/n/10 typ-i-c ally. Underfull \hbox (badness 1817) in paragraph at lines 1115--1123 \T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f ault by Underfull \hbox (badness 10000) in paragraph at lines 1127--1129 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 1371) in paragraph at lines 1638--1640 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1920] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1708. [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 2057) in paragraph at lines 2359--2361 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1930] [1931] [1932] [1933] [1934]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.clipboard}) has been already used, duplicate ignored \relax l.2711 ... the Clipboard in MS Windows}{clipboard} [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] Underfull \hbox (badness 6842) in paragraph at lines 4010--4015 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1954] Underfull \hbox (badness 1430) in paragraph at lines 4073--4077 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1955] Underfull \hbox (badness 1184) in paragraph at lines 4144--4160 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/it/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4144--4160 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/it/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4144--4160 \T1/ptm/m/n/10 able []\T1/zi4/m/it/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1956] [1957] Underfull \hbox (badness 10000) in paragraph at lines 4285--4287 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968]pdf TeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5054 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.format.1}) has been already used, dupl icate ignored \relax l.5054 ...mat Unordered and Ordered Lists}{format} [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 1622) in paragraph at lines 5577--5581 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [1977] [1978] [1979] [1980] [1981] [1982] Underfull \hbox (badness 1448) in paragraph at lines 5956--5961 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [1983] [1984] [1985] [1986] [1987] [1988] [1989] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6502. [1990] Underfull \hbox (badness 1371) in paragraph at lines 6506--6508 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1991] Underfull \hbox (badness 1502) in paragraph at lines 6595--6600 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6595--6600 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [1992] [1993] Underfull \hbox (badness 10000) in paragraph at lines 6768--6777 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [1994] Underfull \hbox (badness 2150) in paragraph at lines 6832--6835 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [1995] [1996] Underfull \hbox (badness 3118) in paragraph at lines 6971--6973 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [1997] [1998] Underfull \hbox (badness 1325) in paragraph at lines 7150--7154 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [1999] Underfull \hbox (badness 1424) in paragraph at lines 7242--7245 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2000] Underfull \hbox (badness 3219) in paragraph at lines 7313--7320 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7313--7320 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7313--7320 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7313--7320 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7321--7324 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2001] [2002] Underfull \hbox (badness 1024) in paragraph at lines 7448--7451 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7481--7486 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013] Underfull \hbox (badness 10000) in paragraph at lines 8185--8187 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2014] [2015] [2016] [2017] [2018] [2019] [2020] [2021] [2022] [2023] [2024] [2025] Underfull \hbox (badness 2310) in paragraph at lines 8945--8950 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2026] [2027] [2028] [2029] [2030] [2031] [2032] Underfull \hbox (badness 1248) in paragraph at lines 9471--9475 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2033] Underfull \hbox (badness 1789) in paragraph at lines 9551--9553 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2034] [2035] [2036] [2037] [2038] [2039] [2040] [2041] [2042] Underfull \vbox (badness 5533) has occurred while \output is active [2043] [2044] [2045] Underfull \hbox (badness 1097) in paragraph at lines 10388--10391 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2046] [2047] Underfull \hbox (badness 3000) in paragraph at lines 10524--10529 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 2134) in paragraph at lines 11113--11118 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2056] Underfull \hbox (badness 10000) in paragraph at lines 11169--11174 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11169--11174 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \hbox (badness 2469) in paragraph at lines 11663--11667 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11663--11667 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 4060) in paragraph at lines 12087--12090 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2070] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12110--12110 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2071] [2072] [2073] Underfull \hbox (badness 2150) in paragraph at lines 12365--12367 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2074] [2075] [2076] [2077] Underfull \hbox (badness 10000) in paragraph at lines 12585--12589 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12618--12624 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12633--12641 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2078] [2079] Underfull \hbox (badness 1009) in paragraph at lines 12812--12824 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If [2080] Underfull \hbox (badness 4779) in paragraph at lines 12852--12854 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 12882--12889 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2081] [2082] [2083] [2084] [2085] [2086] Underfull \hbox (badness 3780) in paragraph at lines 13290--13294 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13306--13309 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2087] [2088] [2089] Underfull \hbox (badness 2302) in paragraph at lines 13511--13513 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2090] [2091] [2092] [2093] [2094] Underfull \hbox (badness 10000) in paragraph at lines 13810--13815 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/it/10 deparse[][][](control = ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 13819--13822 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2095] [2096] [2097] [2098] [2099] [2100] [2101] Underfull \hbox (badness 2932) in paragraph at lines 14252--14259 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14252--14259 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/it/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2102] [2103] Underfull \hbox (badness 1460) in paragraph at lines 14417--14425 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2104] [2105] Underfull \hbox (badness 6510) in paragraph at lines 14567--14571 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14574--14577 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14574--14577 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2106] [2107] [2108] [2109] [2110] [2111] [2112] [2113] [2114] Underfull \hbox (badness 10000) in paragraph at lines 15243--15248 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15243--15248 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15249--15251 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2115] Underfull \hbox (badness 10000) in paragraph at lines 15308--15311 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2116] [2117] [2118] [2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129] [2130]) [2131] [2132] (./KernSmooth-pkg.tex Chapter 15. [2133] [2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]) (./MASS-pkg.tex Chapter 16. [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] Underfull \hbox (badness 10000) in paragraph at lines 2871--2876 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2183] [2184] Underfull \hbox (badness 4686) in paragraph at lines 3039--3041 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] [2209] Underfull \hbox (badness 1117) in paragraph at lines 4810--4813 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2210] Underfull \hbox (badness 1117) in paragraph at lines 4888--4891 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6151 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.npk.1}) has been already used, duplica te ignored \relax l.6151 ...sical N, P, K Factorial Experiment}{npk} [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 1117) in paragraph at lines 7122--7129 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2241] Underfull \hbox (badness 3138) in paragraph at lines 7193--7199 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2242] [2243] [2244] Underfull \hbox (badness 1910) in paragraph at lines 7372--7375 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] Underfull \hbox (badness 4686) in paragraph at lines 8005--8007 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2291] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 5119) in paragraph at lines 488--492 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2297] Underfull \hbox (badness 2035) in paragraph at lines 584--587 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2298] [2299] [2300] [2301] Underfull \hbox (badness 1521) in paragraph at lines 860--865 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 860--865 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 860--865 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2302] [2303] Underfull \hbox (badness 10000) in paragraph at lines 1042--1044 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2304] [2305]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.chol}) has been already used, duplicate ignored \relax l.1154 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.chol.1}) has been already used, duplic ate ignored \relax l.1154 ...- 'Matrix' S4 Generic and Methods}{chol} [2306] [2307] [2308] Underfull \hbox (badness 2277) in paragraph at lines 1424--1427 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2309] [2310] [2311] Underfull \hbox (badness 1097) in paragraph at lines 1594--1597 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1600--1604 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.1657 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colSums.1}) has been already used, dup licate ignored \relax l.1657 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.colMeans}) has been already used, dupl icate ignored \relax l.1658 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowMeans}) has been already used, duplicate i gnored \relax l.1681 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination w ith the same identifier (name{Rfn.rowSums}) has been already used, duplicate ig nored \relax l.1694 \aliasA{rowSums}{colSums}{rowSums} [2312] [2313pdfTeX warning (ext4): de stination with the same identifier (name{Rfn.rowMeans,diagonalMatrix.Rdash.meth od}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1773 ...), matrix(1:3, 3,4), diag(3:2))) # 7 x 8 pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.rowSums,diagonalMatrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.1773 ...), matrix(1:3, 3,4), diag(3:2))) # 7 x 8 ] [2314] [2315] Underfull \hbox (badness 3547) in paragraph at lines 1915--1918 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2316] [2317] [2318] [2319] Underfull \hbox (badness 1983) in paragraph at lines 2337--2345 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/it/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2320] [2321] [2322] [2323] Underfull \hbox (badness 2717) in paragraph at lines 2726--2730 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2324] [2325] Underfull \hbox (badness 6842) in paragraph at lines 2816--2819 []\T1/zi4/m/it/10 Diagonal() []\T1/ptm/m/n/10 re-turns an ob-ject of class [][] []\T1/zi4/m/it/10 ddiMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 ldi Matrix[][][] []\T1/ptm/m/n/10 (with ``su-per-class'' [2326] Underfull \hbox (badness 8019) in paragraph at lines 2957--2959 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 2960--2964 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2327pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coer ce,diagonalMatrix,nMatrix.Rdash.method}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.2980 ] [2328] [2329] Underfull \hbox (badness 1902) in paragraph at lines 3213--3215 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2330] Underfull \hbox (badness 2020) in paragraph at lines 3247--3250 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2331] [2332] Underfull \hbox (badness 4378) in paragraph at lines 3451--3460 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/it/10 selectMethod("coerce", c(from="dsyMat rix", [2333] Underfull \hbox (badness 1354) in paragraph at lines 3519--3522 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2334] [2335] [2336] [2337] [2338] Underfull \hbox (badness 4518) in paragraph at lines 3935--3938 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 3938--3941 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2339] [2340] Underfull \hbox (badness 2318) in paragraph at lines 4062--4066 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2341] Underfull \hbox (badness 3240) in paragraph at lines 4193--4197 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2342] [2343] [2344pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coerce,dtrMatrix,dgeMatrix.Rdash.method}) has been already used, dupl icate ignored ...shipout:D \box_use:N \l_shipout_box l.4350 \item[\code{x}:] Object of class \code{"numeric"}. The numeric] [2345] [2346] [2347] [2348] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4635--4635 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4642--4642 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2349] [2350] [2351] Underfull \hbox (badness 1931) in paragraph at lines 4848--4850 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2352] [2353] [2354] [2355] Underfull \hbox (badness 1005) in paragraph at lines 5151--5156 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5151--5156 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 5170--5173 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2356] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5219--5219 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2357] Underfull \hbox (badness 3229) in paragraph at lines 5326--5335 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the [2358] Underfull \hbox (badness 10000) in paragraph at lines 5368--5370 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5373--5376 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low Underfull \hbox (badness 10000) in paragraph at lines 5383--5386 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2359] [2360] [2361] [2362] [2363] Overfull \hbox (26.39984pt too wide) in paragraph at lines 5776--5776 []\T1/zi4/m/it/10 isSymmetric(object, tol = 100 * .Machine$double.eps, tol1 = 8 * tol, checkDN = TRUE, ...)[] [2364] [2365] [2366] [2367] [2368] [2369] [2370] Underfull \hbox (badness 2478) in paragraph at lines 6402--6407 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 6410--6413 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2371] [2372] [2373] Underfull \hbox (badness 10000) in paragraph at lines 6751--6754 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2374] Underfull \hbox (badness 10000) in paragraph at lines 6830--6833 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2375] Underfull \hbox (badness 2050) in paragraph at lines 6929--6932 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2376] [2377] [2378] [2379] [2380] [2381]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7358 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7449--7451 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode [2382pdfTeX warning (ext4): destination with the same identifier (name{Rfn.coer ce,Matrix,denseMatrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.7454 \item[image] \code{signature(object = "Matrix")}: draws an] Underfull \hbox (badness 4846) in paragraph at lines 7454--7457 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7459--7462 [2383]pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rp cent.*.Rpcent.}) has been already used, duplicate ignored \relax l.7532 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.crossprod}) has been already used, dup licate ignored \relax l.7629 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.tcrossprod}) has been already used, du plicate ignored \relax l.7723 ...tcrossprod}{matrix-products}{tcrossprod} [2384] Underfull \hbox (badness 10000) in paragraph at lines 7892--7897 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7892--7897 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7901--7903 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7903--7905 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2385] [2386] Underfull \hbox (badness 1430) in paragraph at lines 8054--8059 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2387] [2388] Underfull \hbox (badness 10000) in paragraph at lines 8177--8179 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2389] [2390] Underfull \vbox (badness 10000) has occurred while \output is active [2391] Underfull \hbox (badness 2478) in paragraph at lines 8386--8391 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8394--8397 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2392] [2393] Underfull \hbox (badness 5924) in paragraph at lines 8586--8588 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2394]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.nor m}) has been already used, duplicate ignored \relax l.8626 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignor ed \relax l.8626 \HeaderA{norm}{Matrix Norms}{norm} [2395] [2396] [2397] Underfull \hbox (badness 10000) in paragraph at lines 9036--9039 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2398] Underfull \hbox (badness 10000) in paragraph at lines 9118--9121 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2399] [2400] Underfull \hbox (badness 4242) in paragraph at lines 9253--9256 [][][]\T1/zi4/m/it/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/it/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2401] [2402] Underfull \hbox (badness 10000) in paragraph at lines 9332--9334 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2403] [2404] [2405]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9569 \aliasA{qr}{qr-methods}{qr} [2406] [2407] [2408] Underfull \hbox (badness 7186) in paragraph at lines 9736--9742 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2409] [2410]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.rcond}) has been already used, duplicate ignored \relax l.9893 ... the Reciprocal Condition Number}{rcond} [2411] [2412] [2413] [2414] Underfull \hbox (badness 2351) in paragraph at lines 10202--10210 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 10202--10210 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2415] [2416] [2417] [2418]pdfTeX warning (ext4): destination with the same ide ntifier (name{Rfn.solve}) has been already used, duplicate ignored \relax l.10470 \aliasA{solve}{solve-methods}{solve} [2419] [2420] Underfull \hbox (badness 4403) in paragraph at lines 10706--10709 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2421] Underfull \hbox (badness 10000) in paragraph at lines 10776--10779 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10812--10815 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10823--10827 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2422] [2423] [2424] [2425] [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \hbox (badness 10000) in paragraph at lines 11395--11403 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11395--11403 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11420--11428 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11420--11428 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2430]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr. Q}) has been already used, duplicate ignored \relax l.11486 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2431] [2432] Underfull \hbox (badness 5036) in paragraph at lines 11672--11674 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2433] [2434] Underfull \hbox (badness 2828) in paragraph at lines 11834--11837 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11856--11859 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2435] Underfull \vbox (badness 10000) has occurred while \output is active [2436] [2437] [2438] [2439] Underfull \hbox (badness 2057) in paragraph at lines 12207--12209 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2440] [2441] Underfull \hbox (badness 10000) in paragraph at lines 12381--12386 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12387--12393 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2442] Underfull \hbox (badness 1902) in paragraph at lines 12422--12426 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2443] [2444] [2445] [2446] [2447] [2448] [2449] [2450] Underfull \hbox (badness 6910) in paragraph at lines 13147--13149 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2451] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 13194. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 13194. [2452] [2453] [2454]) (./boot-pkg.tex Chapter 18. [2455] [2456] [2457] [2458] [2459] [2460] [2461] [2462] [2463] [2464] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2465] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2466] Underfull \vbox (badness 10000) has occurred while \output is active [2467] [2468] [2469] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2470] [2471] [2472] [2473] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2474] [2475] [2476] [2477] [2478] [2479] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2483] [2484] [2485] [2486] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2487] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2488] [2489] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2490] [2491] [2492] [2493] [2494] [2495] [2496] [2497] [2498] [2499] [2500] [2501] [2502] [2503] [2504] [2505] [2506] [2507] [2508] [2509] [2510] [2511] [2512] [2513] [2514] [2515] [2516] [2517] [2518] [2519] [2520] [2521] [2522] [2523] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2524] [2525] [2526] [2527] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2528] [2529] [2530] [2531] [2532] [2533] [2534] [2535] [2536] [2537] [2538] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2539] [2540] [2541] [2542] [2543] [2544] [2545] [2546] [2547] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2548] [2549] [2550] [2551] [2552] [2553] [2554] [2555] [2556] [2557]) (./class-pkg.tex [2558] Chapter 19. [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570] [2571] [2572] [2573] [2574]) (./cluster-pkg.tex Chapter 20. [2575] [2576] [2577] [2578] [2579] Underfull \vbox (badness 7777) has occurred while \output is active [2580] [2581] [2582] [2583] [2584] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2585] [2586] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2587] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2588] [2589] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2590] [2591] [2592] [2593] [2594] [2595] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2596] [2597] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2598] Underfull \hbox (badness 4954) in paragraph at lines 1686--1688 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/i t/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2599] Underfull \hbox (badness 7667) in paragraph at lines 1699--1703 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1699--1703 \T1/ptm/m/n/10 (incl []\T1/zi4/m/it/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/it/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/it/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2600] [2601] [2602] [2603] [2604] [2605] Underfull \hbox (badness 10000) in paragraph at lines 2207--2210 [2606] Underfull \hbox (badness 10000) in paragraph at lines 2221--2227 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2607] [2608] [2609] Underfull \hbox (badness 6675) in paragraph at lines 2456--2458 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2610] [2611] [2612] [2613] [2614] [2615] [2616] [2617] Underfull \hbox (badness 2980) in paragraph at lines 3051--3055 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2618] [2619] [2620] [2621] [2622] [2623] Underfull \hbox (badness 1142) in paragraph at lines 3392--3395 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2624] [2625] Underfull \hbox (badness 1142) in paragraph at lines 3511--3514 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2626] [2627] [2628] Underfull \hbox (badness 2582) in paragraph at lines 3734--3739 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2629] Underfull \hbox (badness 2698) in paragraph at lines 3796--3801 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3796--3801 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2630] [2631] [2632] [2633] [2634] Underfull \hbox (badness 10000) in paragraph at lines 4088--4090 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2635] [2636] [2637] [2638] Underfull \hbox (badness 2626) in paragraph at lines 4317--4322 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2639] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2640] [2641] [2642] [2643] [2644] [2645] [2646] Underfull \hbox (badness 10000) in paragraph at lines 4839--4841 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2647] [2648]) (./codetools-pkg.tex Chapter 21. [2649] [2650] [2651] [2652] [2653]) (./foreign-pkg.tex [2654] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2655] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2656] [2657] [2658] [2659] [2660] [2661] [2662] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, [2663] Overfull \hbox (6.73795pt too wide) in paragraph at lines 624--624 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2664] [2665] [2666] Underfull \hbox (badness 10000) in paragraph at lines 812--813 [2667] Underfull \hbox (badness 10000) in paragraph at lines 869--873 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 869--873 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2668] [2669] Underfull \hbox (badness 10000) in paragraph at lines 990--992 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2670] [2671] [2672] [2673] Underfull \hbox (badness 10000) in paragraph at lines 1270--1276 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2674] [2675]) (./lattice-pkg.tex [2676] Chapter 23. [2677] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2678] [2679] [2680] [2681] [2682] [2683] [2684] [2685] [2686] [2687] [2688] [2689] [2690] [2691] [2692] Underfull \hbox (badness 1062) in paragraph at lines 1398--1402 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2693] Underfull \vbox (badness 4416) has occurred while \output is active [2694] Underfull \hbox (badness 1803) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1566--1583 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2695] [2696] [2697] Underfull \hbox (badness 3009) in paragraph at lines 1725--1727 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1755--1759 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2698] [2699] [2700] [2701] [2702] Underfull \hbox (badness 10000) in paragraph at lines 2141--2144 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2703] [2704] [2705] [2706] [2707] [2708] [2709] [2710] [2711] [2712] Underfull \hbox (badness 2781) in paragraph at lines 2849--2851 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2713] [2714] Underfull \hbox (badness 2486) in paragraph at lines 3001--3005 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2715] [2716] [2717] [2718] [2719] [2720]pdfTeX warning (ext4): destination wit h the same identifier (name{Rfn.parallel}) has been already used, duplicate ign ored \relax l.3475 \aliasA{parallel}{B\_08\_splom}{parallel} [2721] [2722] [2723] [2724] [2725] [2726] [2727] [2728] Underfull \hbox (badness 5696) in paragraph at lines 3970--3974 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3970--3974 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2729] Underfull \hbox (badness 1173) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in [2730] Underfull \hbox (badness 3219) in paragraph at lines 4136--4138 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2731] [2732] Underfull \hbox (badness 3492) in paragraph at lines 4336--4346 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , [2733] Underfull \hbox (badness 10000) in paragraph at lines 4361--4364 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4364--4366 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2734] [2735] [2736] [2737] [2738] [2739] [2740] [2741] [2742] Underfull \hbox (badness 6157) in paragraph at lines 5087--5090 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2743] [2744] [2745] [2746] [2747] [2748] [2749] Underfull \hbox (badness 10000) in paragraph at lines 5545--5548 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5545--5548 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2750] [2751] [2752] [2753] [2754] Underfull \hbox (badness 4805) in paragraph at lines 5907--5911 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 5918--5925 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 5918--5925 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 5918--5925 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 5918--5925 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2755] [2756] [2757] [2758] Underfull \hbox (badness 4242) in paragraph at lines 6218--6223 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6218--6223 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2759] [2760] Underfull \hbox (badness 2310) in paragraph at lines 6334--6339 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2761] [2762] [2763] [2764] [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \hbox (badness 3168) in paragraph at lines 7116--7120 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2772] [2773] [2774] [2775] Underfull \hbox (badness 2012) in paragraph at lines 7387--7390 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2776] [2777] Underfull \hbox (badness 3333) in paragraph at lines 7559--7561 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing [2778] [2779] [2780] Underfull \vbox (badness 10000) has occurred while \output is active [2781] [2782] [2783] Underfull \hbox (badness 1436) in paragraph at lines 7973--7979 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2784] [2785] [2786] [2787] [2788] [2789] [2790] [2791] Underfull \hbox (badness 10000) in paragraph at lines 8531--8534 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2792] Underfull \hbox (badness 1092) in paragraph at lines 8577--8579 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2793] [2794] Underfull \hbox (badness 3895) in paragraph at lines 8738--8741 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2795] Underfull \hbox (badness 1515) in paragraph at lines 8814--8818 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2796] [2797] Underfull \hbox (badness 6316) in paragraph at lines 8920--8925 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 8937--8940 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2798] [2799] [2800] [2801] Underfull \hbox (badness 1728) in paragraph at lines 9228--9232 []\T1/ptm/m/n/10 Returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2802] [2803] [2804] [2805] [2806] [2807] [2808] Underfull \hbox (badness 2310) in paragraph at lines 9692--9696 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9697--9700 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2809] [2810] [2811]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma}) has been already used, duplicate ignored \relax l.9923 \aliasA{melanoma}{H\_melanoma}{melanoma} [2812] [2813] [2814] Underfull \hbox (badness 4144) in paragraph at lines 10147--10150 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10147--10150 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2815] [2816]) (./mgcv-pkg.tex Chapter 24. [2817] [2818] [2819] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2820] [2821] [2822] [2823] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2824] [2825] [2826] [2827] [2828] [2829] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2830] [2831] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2832] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2833] Underfull \vbox (badness 10000) has occurred while \output is active [2834] [2835] [2836] [2837] [2838] [2839] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2840] [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] [2846] [2847] [2848] [2849] [2850] [2851] [2852] [2853] [2854] [2855] [2856] [2857] [2858] [2859] [2860] [2861] [2862] Underfull \hbox (badness 1142) in paragraph at lines 2592--2596 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 2618--2624 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2863] [2864] [2865] [2866] [2867] [2868] Underfull \vbox (badness 10000) has occurred while \output is active [2869] Underfull \vbox (badness 10000) has occurred while \output is active [2870] Underfull \vbox (badness 10000) has occurred while \output is active [2871] [2872] [2873] [2874] [2875] [2876] [2877] [2878] [2879] [2880] [2881] [2882] [2883] [2884] [2885] [2886] Underfull \hbox (badness 10000) in paragraph at lines 4063--4067 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2887] [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] Underfull \hbox (badness 1184) in paragraph at lines 4350--4354 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2892] [2893] [2894] [2895] [2896] [2897] [2898] [2899] [2900] [2901] [2902] [2903] Underfull \hbox (badness 1142) in paragraph at lines 5073--5077 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2904] Underfull \hbox (badness 1231) in paragraph at lines 5177--5179 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2905] [2906] [2907] Underfull \vbox (badness 10000) has occurred while \output is active [2908] [2909] [2910] [2911] Underfull \hbox (badness 2181) in paragraph at lines 5621--5622 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2912] [2913] [2914] [2915] [2916] [2917] [2918] Underfull \hbox (badness 10000) in paragraph at lines 6010--6011 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2919] [2920] [2921] [2922] [2923] [2924] [2925] [2926] [2927] [2928] [2929] Underfull \hbox (badness 1142) in paragraph at lines 6595--6599 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2930] [2931] [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] [2935] [2936] Underfull \hbox (badness 1087) in paragraph at lines 6967--6968 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2937] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939] Underfull \vbox (badness 10000) has occurred while \output is active [2940] [2941] [2942] [2943] [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] Underfull \hbox (badness 1242) in paragraph at lines 7916--7917 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2953] [2954] [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] Underfull \hbox (badness 6001) in paragraph at lines 8561--8563 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2964] [2965] [2966] [2967] [2968] [2969] [2970] [2971] [2972] [2973] Underfull \vbox (badness 10000) has occurred while \output is active [2974] [2975] Underfull \hbox (badness 1038) in paragraph at lines 9310--9313 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9310--9313 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [2976] Underfull \hbox (badness 10000) in paragraph at lines 9366--9369 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [2977] [2978] [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 1852) in paragraph at lines 10040--10043 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2988] [2989] [2990] Underfull \hbox (badness 1852) in paragraph at lines 10209--10212 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [2991] [2992] Underfull \vbox (badness 10000) has occurred while \output is active [2993] [2994] Underfull \hbox (badness 1205) in paragraph at lines 10449--10451 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10449--10451 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10455--10460 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [2995] Underfull \hbox (badness 1205) in paragraph at lines 10539--10541 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10539--10541 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [2996] [2997] [2998] Underfull \hbox (badness 1253) in paragraph at lines 10738--10740 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [2999] [3000] [3001] [3002] [3003] [3004] Underfull \hbox (badness 4792) in paragraph at lines 10999--11002 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10999--11002 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3005] Underfull \hbox (badness 10000) in paragraph at lines 11106--11109 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [3006] [3007] [3008] [3009] [3010] [3011] [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] Underfull \hbox (badness 3861) in paragraph at lines 11898--11901 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3020] [3021] Underfull \hbox (badness 1320) in paragraph at lines 12013--12018 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3022] Underfull \hbox (badness 1975) in paragraph at lines 12119--12124 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3023] [3024] Underfull \hbox (badness 1762) in paragraph at lines 12208--12220 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3025] [3026] [3027] Underfull \hbox (badness 7667) in paragraph at lines 12420--12426 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3028] Underfull \hbox (badness 10000) in paragraph at lines 12461--12462 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3029] [3030] [3031] [3032] Underfull \vbox (badness 10000) has occurred while \output is active [3033] Underfull \hbox (badness 10000) in paragraph at lines 12738--12740 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3034] [3035] Underfull \hbox (badness 10000) in paragraph at lines 12868--12869 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3036] [3037] [3038] Underfull \hbox (badness 1436) in paragraph at lines 13004--13011 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3039] [3040] Underfull \hbox (badness 10000) in paragraph at lines 13103--13104 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3041] [3042] [3043] [3044] [3045] [3046] [3047] [3048] [3049] [3050] Underfull \hbox (badness 10000) in paragraph at lines 13704--13710 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13704--13710 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3051] [3052] [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] Underfull \vbox (badness 10000) has occurred while \output is active [3055] [3056] Underfull \hbox (badness 10000) in paragraph at lines 14047--14048 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3057] [3058] [3059] [3060] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14259--14259 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3061] [3062] Underfull \hbox (badness 3895) in paragraph at lines 14405--14408 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3063] Underfull \hbox (badness 10000) in paragraph at lines 14450--14452 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3064] [3065] [3066] [3067] [3068] Underfull \hbox (badness 1371) in paragraph at lines 14730--14736 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14741--14743 []\T1/zi4/m/it/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14741--14743 [][][]\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3069] Underfull \hbox (badness 10000) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14771--14775 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3070] [3071] [3072] [3073] Underfull \hbox (badness 2326) in paragraph at lines 14976--14983 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3074] Underfull \hbox (badness 2158) in paragraph at lines 15061--15061 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3075] [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] [3091] [3092] [3093] [3094] [3095] [3096] [3097] [3098] [3099] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16623--16623 []\T1/zi4/m/it/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3100] [3101] Underfull \hbox (badness 1796) in paragraph at lines 16736--16739 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3102] [3103] [3104] [3105] Underfull \vbox (badness 10000) has occurred while \output is active [3106] [3107] [3108] [3109] [3110] [3111]) (./nlme-pkg.tex [3112] Chapter 25. [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] [3135] [3136] [3137] [3138] [3139] [3140] [3141] [3142] [3143] [3144] [3145] [3146] Underfull \hbox (badness 10000) in paragraph at lines 2258--2264 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161pdfTeX warning (ext4): destination with the same iden tifier (name{Rfn.corMatrix.corCompSymm}) has been already used, duplicate ignor ed ...shipout:D \box_use:N \l_shipout_box l.3194 ] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] Underfull \hbox (badness 1067) in paragraph at lines 4419--4424 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3180] [3181] [3182] [3183] [3184] [3185] [3186] [3187] [3188] [3189] [3190] [3191] Underfull \hbox (badness 10000) in paragraph at lines 5165--5169 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3192] [3193] [3194] [3195] [3196] [3197] [3198] Underfull \hbox (badness 10000) in paragraph at lines 5597--5600 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3199] [3200] [3201] [3202] [3203] [3204] [3205] Underfull \hbox (badness 10000) in paragraph at lines 5978--5983 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3206] [3207] [3208] [3209] Underfull \hbox (badness 1490) in paragraph at lines 6253--6264 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3210] Underfull \hbox (badness 10000) in paragraph at lines 6317--6319 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3211] [3212] [3213] [3214] [3215] [3216] Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3217] [3218] [3219] [3220] Underfull \hbox (badness 10000) in paragraph at lines 7002--7009 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3221] [3222] [3223] [3224] Underfull \hbox (badness 10000) in paragraph at lines 7262--7267 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3225] [3226] [3227] [3228] [3229] [3230] [3231] [3232] [3233] [3234] [3235] [3236] [3237] [3238] [3239] [3240] [3241] [3242] [3243] Underfull \hbox (badness 10000) in paragraph at lines 8535--8537 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3244] [3245] [3246] [3247] [3248] Underfull \hbox (badness 10000) in paragraph at lines 8814--8821 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3249] [3250] [3251] [3252] [3253] [3254] [3255] [3256] Underfull \hbox (badness 10000) in paragraph at lines 9336--9343 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3257] [3258] [3259] [3260] [3261]pdfTeX warning (ext4): destination with the s ame identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9698 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.Matrix.1}) has been already used, dupl icate ignored \relax l.9698 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3262] [3263] [3264] [3265] [3266] [3267] [3268] [3269] [3270] [3271] [3272] [3273] Underfull \hbox (badness 1596) in paragraph at lines 10471--10497 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3274] [3275] Underfull \hbox (badness 1490) in paragraph at lines 10609--10615 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3276] [3277] [3278] [3279] Underfull \hbox (badness 10000) in paragraph at lines 10850--10852 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3280] [3281] [3282] [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] [3291] [3292] [3293] [3294] [3295] [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] [3310] [3311] [3312] [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] Underfull \hbox (badness 1286) in paragraph at lines 13747--13754 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330] [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342]pdfTeX war ning (ext4): destination with the same identifier (name{Rfn.random.effects}) ha s been already used, duplicate ignored \relax l.15190 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.random.effects.1}) has been already us ed, duplicate ignored \relax l.15190 ...Extract Random Effects}{random.effects} [3343] [3344] [3345] [3346] [3347] [3348] [3349] [3350] [3351] [3352] Underfull \hbox (badness 3884) in paragraph at lines 15830--15834 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15830--15834 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15830--15834 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3353] [3354] Underfull \hbox (badness 1067) in paragraph at lines 15942--15947 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3355] [3356] [3357] [3358] Underfull \hbox (badness 1448) in paragraph at lines 16185--16194 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] Underfull \hbox (badness 1728) in paragraph at lines 16889--16892 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3369] [3370] [3371] [3372] [3373] Underfull \hbox (badness 8056) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17223--17232 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3374] [3375] [3376] [3377] [3378] Underfull \hbox (badness 10000) in paragraph at lines 17545--17553 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] [3387] [3388] Underfull \hbox (badness 10000) in paragraph at lines 18255--18265 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18255--18265 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3389] [3390] [3391] [3392] [3393] Underfull \hbox (badness 5036) in paragraph at lines 18579--18588 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] [3403] [3404] [3405] [3406]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.multinom.1}) has been already used, du plicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3407] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3408] [3409] [3410] [3411] [3412] [3413] [3414]) (./rpart-pkg.tex Chapter 27. [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/it/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/it/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/it/10 n \T1/ptm/m/n/10 for [3425] [3426] [3427] [3428] [3429] [3430] [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440] [3441] [3442] [3443]) (./spatial-pkg.tex [3444] Chapter 28. [3445] [3446] [3447] [3448] [3449] [3450] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] [3459] [3460] [3461] [3462] [3463]) (./survival-pkg.tex [3464] Chapter 29. [3465] [3466] [3467] [3468] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3469] [3470]pdfTeX warning (ext4): destination with the same identifier (name{ Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destin ation with the same identifier (name{Rfn.aml.1}) has been already used, duplica te ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3471] [3472] [3473] [3474] [3475] [3476] [3477] [3478] [3479] [3480] [3481] Underfull \hbox (badness 1097) in paragraph at lines 1106--1108 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3482] [3483] [3484]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) has been already used, duplicate ignored \relax l.1308 ...erapy for Stage B/C colon cancer}{colon} Underfull \vbox (badness 10000) has occurred while \output is active [3485] Underfull \hbox (badness 3679) in paragraph at lines 1356--1360 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] Underfull \hbox (badness 3250) in paragraph at lines 1964--1979 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 1964--1979 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3494] [3495] [3496] [3497] [3498] [3499] [3500] [3501] [3502] [3503] [3504] [3505] [3506] [3507] [3508] [3509] [3510] Underfull \vbox (badness 10000) has occurred while \output is active [3511] [3512] [3513] Underfull \hbox (badness 1389) in paragraph at lines 3366--3368 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3514] [3515] [3516] [3517] Overfull \hbox (467.89665pt too wide) in alignment at lines 3652--3652 [] [] Underfull \vbox (badness 10000) has occurred while \output is active [3518] Overfull \vbox (8.56093pt too high) has occurred while \output is active [3519] [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] [3531] Underfull \vbox (badness 1629) has occurred while \output is active [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] [3543] Underfull \hbox (badness 5274) in paragraph at lines 5386--5388 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3544] [3545] [3546] [3547] [3548] [3549] [3550] [3551] [3552] [3553] [3554] [3555] [3556] [3557] [3558] [3559] [3560] [3561] Underfull \hbox (badness 1281) in paragraph at lines 6654--6657 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570]pdfTeX warning (e xt4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7224 ...ata from a soldering experiment}{solder} [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] Underfull \hbox (badness 1038) in paragraph at lines 8722--8728 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3592] [3593] [3594] [3595] [3596] Underfull \hbox (badness 10000) in paragraph at lines 9080--9085 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3597] [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] [3606] [3607] [3608] Underfull \hbox (badness 1354) in paragraph at lines 10020--10024 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. 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coerce,atomicVector,sparseVector-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8178--8180 []\T1/zi4/m/it/10 coerce,CHMfactor,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8182--8184 []\T1/zi4/m/it/10 coerce,CsparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8184--8186 []\T1/zi4/m/it/10 coerce,CsparseMatrix,generalMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8188--8190 []\T1/zi4/m/it/10 coerce,CsparseMatrix,packedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8190--8192 []\T1/zi4/m/it/10 coerce,CsparseMatrix,RsparseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8192--8194 []\T1/zi4/m/it/10 coerce,CsparseMatrix,sparseVector-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8194--8196 []\T1/zi4/m/it/10 coerce,CsparseMatrix,TsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 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paragraph at lines 8422--8424 []\T1/zi4/m/it/10 coerce,dsparseMatrix,nsparseMatrix-method [3697] [3698] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8614--8616 []\T1/zi4/m/it/10 coerce,indMatrix,diagonalMatrix-method [3699] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8648--8650 []\T1/zi4/m/it/10 coerce,indMatrix,unpackedMatrix-method [3700] Overfull \hbox (15.8567pt too wide) in paragraph at lines 8782--8784 []\T1/zi4/m/it/10 coerce,lsparseMatrix,dsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8786--8788 []\T1/zi4/m/it/10 coerce,lsparseMatrix,nsparseMatrix-method [3701] [3702] [3703] Overfull \hbox (0.8567pt too wide) in paragraph at lines 9120--9122 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9128--9130 []\T1/zi4/m/it/10 coerce,matrix.coo,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9132--9134 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9134--9136 []\T1/zi4/m/it/10 coerce,matrix.csc,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9140--9142 []\T1/zi4/m/it/10 coerce,matrix.csc,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9144--9146 []\T1/zi4/m/it/10 coerce,matrix.csc,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9146--9148 []\T1/zi4/m/it/10 coerce,matrix.csr,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9154--9156 []\T1/zi4/m/it/10 coerce,matrix.csr,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9158--9160 []\T1/zi4/m/it/10 coerce,matrix.csr,TsparseMatrix-method [3704] Overfull \hbox (15.8567pt too wide) in paragraph at lines 9260--9262 []\T1/zi4/m/it/10 coerce,nsparseMatrix,dsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 9266--9268 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crossprod,CsparseMatrix,CsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10278--10280 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,ddenseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 10280--10282 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,diagonalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10284--10286 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,missing-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10286--10288 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,numLike-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10288--10290 []\T1/zi4/m/it/10 crossprod,ddenseMatrix,CsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 10290--10292 []\T1/zi4/m/it/10 crossprod,ddenseMatrix,ddenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10292--10294 []\T1/zi4/m/it/10 crossprod,ddenseMatrix,dgCMatrix-method Overfull \hbox (25.8567pt too wide) in 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crossprod,diagonalMatrix,matrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10324--10326 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,missing-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 10326--10328 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,sparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10328--10330 []\T1/zi4/m/it/10 crossprod,dsparseMatrix,ddenseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 10330--10332 []\T1/zi4/m/it/10 crossprod,dsparseMatrix,dgeMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10332--10334 []\T1/zi4/m/it/10 crossprod,dtpMatrix,ddenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 10336--10338 []\T1/zi4/m/it/10 crossprod,dtrMatrix,ddenseMatrix-method [3712] Overfull \hbox (20.8567pt too wide) in paragraph at lines 10350--10352 []\T1/zi4/m/it/10 crossprod,ldenseMatrix,ddenseMatrix-method Overfull \hbox (20.8567pt too wide) in 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\T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10554--10556 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ps.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 10562--10564 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3714] [3715] Overfull \hbox (15.8567pt too wide) in paragraph at lines 10919--10921 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 10939--10941 []\T1/zi4/m/it/10 determinant,MatrixFactorization,missing-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10943--10945 []\T1/zi4/m/it/10 determinant,triangularMatrix,logical-method [3716] [3717] [3718] Overfull \hbox (15.01662pt too wide) in paragraph at lines 11626--11628 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3719] [3720] [3721] [3722] Overfull \hbox (35.8567pt too wide) in paragraph at lines 12513--12515 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 12515--12517 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 12517--12519 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,character-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 12519--12521 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,missing-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 12521--12523 []\T1/zi4/m/it/10 forceSymmetric,indMatrix,character-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 12523--12525 []\T1/zi4/m/it/10 forceSymmetric,indMatrix,missing-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 12525--12527 []\T1/zi4/m/it/10 forceSymmetric,matrix,character-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 12529--12531 []\T1/zi4/m/it/10 forceSymmetric,packedMatrix,character-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 12531--12533 []\T1/zi4/m/it/10 forceSymmetric,packedMatrix,missing-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 12533--12535 []\T1/zi4/m/it/10 forceSymmetric,RsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 12535--12537 []\T1/zi4/m/it/10 forceSymmetric,RsparseMatrix,missing-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 12537--12539 []\T1/zi4/m/it/10 forceSymmetric,TsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 12539--12541 []\T1/zi4/m/it/10 forceSymmetric,TsparseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 12541--12543 []\T1/zi4/m/it/10 forceSymmetric,unpackedMatrix,character-method Overfull \hbox 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Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-FAQ.texi @setfilename R-FAQ.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] [-1] Chapter 1 Cross reference values unknown; you must run TeX again. [1] Chapter 2 [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 644--647 []@textrm (+20) Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat -ics''. Underfull \hbox (badness 10000) in paragraph at lines 644--647 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ [7] Underfull \hbox (badness 10000) in paragraph at lines 671--676 @textrm (+20) (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] [18] Underfull \hbox (badness 10000) in paragraph at lines 1541--1544 []@textrm (+20) See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_ programming_language# Underfull \hbox (badness 10000) in paragraph at lines 1541--1544 @texttt Commercialized_versions_of_R[][][] @textrm (+20) for point-ers to com-m er-cial-ized ver-sions of Chapter 4 [19] Chapter 5 [20] [21] [22] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1829--1829 []@smalltt MASS Sup-port Func-tions and Datasets for Ven-ables and Ri p-ley's MASS[] [23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] Writing index file R-FAQ.fn [39] [40] [41] [42] Chapter 8 [43] Chapter 9 [44] [45] [46] Chapter 10 [47] [48] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (50 pages, 362762 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.aux) [1] Chapter 2 [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 644--647 []@textrm (+20) Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat -ics''. Underfull \hbox (badness 10000) in paragraph at lines 644--647 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ [7] Underfull \hbox (badness 10000) in paragraph at lines 671--676 @textrm (+20) (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] [18] Underfull \hbox (badness 10000) in paragraph at lines 1541--1544 []@textrm (+20) See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_ programming_language# Underfull \hbox (badness 10000) in paragraph at lines 1541--1544 @texttt Commercialized_versions_of_R[][][] @textrm (+20) for point-ers to com-m er-cial-ized ver-sions of Chapter 4 [19] Chapter 5 [20] [21] [22] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1829--1829 []@smalltt MASS Sup-port Func-tions and Datasets for Ven-ables and Ri p-ley's MASS[] [23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] Writing index file R-FAQ.fn [39] [40] [41] [42] Chapter 8 [43] Chapter 9 [44] [45] [46] Chapter 10 [47] [48] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (52 pages, 378512 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-FAQ.aux) [1] Chapter 2 [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 644--647 []@textrm (+20) Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat -ics''. Underfull \hbox (badness 10000) in paragraph at lines 644--647 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ [7] Underfull \hbox (badness 10000) in paragraph at lines 671--676 @textrm (+20) (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] [18] Underfull \hbox (badness 10000) in paragraph at lines 1541--1544 []@textrm (+20) See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_ programming_language# Underfull \hbox (badness 10000) in paragraph at lines 1541--1544 @texttt Commercialized_versions_of_R[][][] @textrm (+20) for point-ers to com-m er-cial-ized ver-sions of Chapter 4 [19] Chapter 5 [20] [21] [22] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1829--1829 []@smalltt MASS Sup-port Func-tions and Datasets for Ven-ables and Ri p-ley's MASS[] [23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] Writing index file R-FAQ.fn [39] [40] [41] [42] Chapter 8 [43] Chapter 9 [44] [45] [46] Chapter 10 [47] [48] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (52 pages, 378512 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-admin.texi @setfilename R-admin.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en Underfull \hbox (badness 8019) in paragraph at lines 151--156 []@textrm (+20) The tar-balls are avail-able from [][]@texttt https:// stat. ethz. ch/ R/ daily/ [][][]@textrm (+20) . Down-load [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1511--1515 []@textrm (+20) Parallel check-ing of pack-age sources (part of @texttt make ch eck-devel[] @textrm (+20) and @texttt make Chapter 4 [17] [18] [19] Chapter 5 [20] Chapter 6 [21] [22] [23] [24] [25] Overfull \hbox (56.55324pt too wide) in paragraph at lines 2344--2344 []@texttt ./configure CC="clang -arch arm64" CFLAGS=-O2 CXX="clang++ -arch arm 64" CXXFLAGS=-O2[] [26] [27] [28] [29] Chapter 7 [30] [31] [32] Chapter 8 [33] Chapter 9 [34] [35] Appendix A [36] [37] [38] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3303--3303 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] Appendix B [49] [50] [51] [52] [53] Appendix C [54] [55] [56] [57] [58] [59] Overfull \hbox (112.72658pt too wide) in paragraph at lines 5182--5182 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/pcre2-10.39-d arwin.17-x86_64.tar.xz[] Overfull \hbox (95.48051pt too wide) in paragraph at lines 5184--5184 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/xz-5.2.5-darw in.17-x86_64.tar.xz[] [60] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5333--5334 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][][]@smallrm .| [61] Underfull \hbox (badness 10000) in paragraph at lines 5361--5365 @texttt releases/ download/ 11. 2-bigsur-intel/ gfortran-Intel-11. 2-BigSu r. dmg[][][] @textrm (+20) and for [62] Overfull \hbox (62.30193pt too wide) in paragraph at lines 5426--5426 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:$LOCAL/lib/pkgconfig:/ usr/lib/pkgconfig[] [63] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5532--5532 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][][]| [64] [65] [66] Underfull \hbox (badness 10000) in paragraph at lines 5849--5855 @textrm (+20) in @texttt src/Makevars[]@textrm (+20) . It would also be pos-si -ble to static link the For- Underfull \hbox (badness 10000) in paragraph at lines 5849--5855 @textrm (+20) tran run-time li-braries @texttt /usr/local/gfortran/lib/libgfor tran.a[] @textrm (+20) and Underfull \hbox (badness 10000) in paragraph at lines 5849--5855 @texttt /usr/local/gfortran/lib/libquadmath.a[] @textrm (+20) should the For-t ran com-piler have [67] Overfull \hbox (22.06111pt too wide) in paragraph at lines 6035--6035 []@texttt FC="/usr/local/gfortran/bin/gfortran -mtune=native -mmacosx-version- min=10.13"[] [68] (Function and variable index) [69] No file R-admin.vrs. (Concept index) [70] No file R-admin.cps. (Environment variable index) [71] No file R-admin.ens. [72] ) (see the transcript file for additional information)pdfTeX warning (dest): name {\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not ex ist, replaced by a fixed one Output written on R-admin.pdf (75 pages, 486514 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en Underfull \hbox (badness 8019) in paragraph at lines 151--156 []@textrm (+20) The tar-balls are avail-able from [][]@texttt https:// stat. ethz. ch/ R/ daily/ [][][]@textrm (+20) . Down-load [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1511--1515 []@textrm (+20) Parallel check-ing of pack-age sources (part of @texttt make ch eck-devel[] @textrm (+20) and @texttt make Chapter 4 [17] [18] [19] Chapter 5 [20] Chapter 6 [21] [22] [23] [24] [25] Overfull \hbox (56.55324pt too wide) in paragraph at lines 2344--2344 []@texttt ./configure CC="clang -arch arm64" CFLAGS=-O2 CXX="clang++ -arch arm 64" CXXFLAGS=-O2[] [26] [27] [28] [29] Chapter 7 [30] [31] [32] Chapter 8 [33] Chapter 9 [34] [35] Appendix A [36] [37] [38] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3303--3303 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] Appendix B [49] [50] [51] [52] [53] Appendix C [54] [55] [56] [57] [58] [59] Overfull \hbox (112.72658pt too wide) in paragraph at lines 5182--5182 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/pcre2-10.39-d arwin.17-x86_64.tar.xz[] Overfull \hbox (95.48051pt too wide) in paragraph at lines 5184--5184 []@texttt curl -OL https://mac.r-project.org/bin/darwin17/x86_64/xz-5.2.5-darw in.17-x86_64.tar.xz[] l.5231: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5231: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5231: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [60] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5333--5334 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][][]@smallrm .| [61] Underfull \hbox (badness 10000) in paragraph at lines 5361--5365 @texttt releases/ download/ 11. 2-bigsur-intel/ gfortran-Intel-11. 2-BigSu r. dmg[][][] @textrm (+20) and for [62] Overfull \hbox (62.30193pt too wide) in paragraph at lines 5426--5426 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:$LOCAL/lib/pkgconfig:/ usr/lib/pkgconfig[] [63] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5532--5532 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][][]| [64] [65] [66] Underfull \hbox (badness 10000) in paragraph at lines 5849--5855 @textrm (+20) in @texttt src/Makevars[]@textrm (+20) . It would also be pos-si -ble to static link the For- Underfull \hbox (badness 10000) in paragraph at lines 5849--5855 @textrm (+20) tran run-time li-braries @texttt /usr/local/gfortran/lib/libgfor tran.a[] @textrm (+20) and Underfull \hbox (badness 10000) in paragraph at lines 5849--5855 @texttt /usr/local/gfortran/lib/libquadmath.a[] @textrm (+20) should the For-t ran com-piler have [67] Overfull \hbox (22.06111pt too wide) in paragraph at lines 6035--6035 []@texttt FC="/usr/local/gfortran/bin/gfortran -mtune=native -mmacosx-version- min=10.13"[] [68] (Function and variable index) [69] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.vrs) (Concept index) [70] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.cps) (Environment variable index) [71] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-admin.ens) [72] ) (see the transcript file for additional information)pdfTeX warning (dest): name {\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not ex ist, replaced by a fixed one Output written on R-admin.pdf (77 pages, 531077 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-data.texi @setfilename R-data.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm (+20) Function @texttt write.foreign[] @textrm (+20) in pack-age [][] @textbf (+20) foreign @textrm (+20) (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] No file R-data.vrs. (Concept index) [29] No file R-data.cps. [30] ) (see the transcript file for additional information) Output written on R-data.pdf (33 pages, 271497 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm (+20) Function @texttt write.foreign[] @textrm (+20) in pack-age [][] @textbf (+20) foreign @textrm (+20) (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 311105 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm (+20) Function @texttt write.foreign[] @textrm (+20) in pack-age [][] @textbf (+20) foreign @textrm (+20) (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 311112 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi @setfilename R-exts.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm (+20) The `@texttt Depends[]@textrm (+20) '[], `@texttt Imports[]@tex trm (+20) '[], `@texttt Suggests[]@textrm (+20) '[], `@texttt Enhances[]@textrm (+20) '[], `@texttt LinkingTo[]@textrm (+20) '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1539--1539 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1540--1540 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2603--2603 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2605--2605 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2846--2849 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2924--2924 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2947--2953 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3037--3041 @textrm (+20) ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manu al/ cmake-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3138--3138 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4762--4762 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4781--4781 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5213--5213 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 (announced 19 20 21)[] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5223--5223 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5225--5225 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5226--5226 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5241--5241 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5755--5758 @texttt gcc/ C-Extensions. html[][][] @textrm (+20) and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5979--5979 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6092--6093 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6543--6553 []@textrm (+20) R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-project. org[]@textrm (+20) )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7595--7602 []@textrm (+20) The two com-monly used sim-ple forms are @texttt \figure{@textt tsl filename@texttt }[] @textrm (+20) and [87] [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9059--9068 []@texttt debug[] @textrm (+20) can be used for hid-den func-tions and S3 meth- ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9328--9340 @textrm (+20) See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual . html# controlling-code-generation[][][]@textrm (+20) , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9344--9345 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9483--9483 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9516--9518 []@textrm (+20) This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9662--9662 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [111] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 10032--10034 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10089--10089 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10108--10108 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10119--10119 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10149--10149 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11002--11002 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11588--11588 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12598--12602 []@textrm (+20) Functions @texttt any_duplicated[] @textrm (+20) and @texttt an y_duplicated3[] @textrm (+20) are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13694--13694 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13789--13789 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 []@textrm (+20) Passing a variable-length string from C to For-tran is trick-ie r, but Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 [][]@texttt https:// www. intel. com/ content/ www/ us/ en/ develop/ d ocumentation/ Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15835--15841 []@textrm (+20) The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/G raphicsEngine.h[]@textrm (+20) , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16253--16253 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16311--16311 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16826--16833 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm (+20) from an ad-min-i s-tra-tive in-stall and [194] [195] (Function and variable index) [196] No file R-exts.vrs. (Concept index) [197] No file R-exts.cps. [198] ) (see the transcript file for additional information) Output written on R-exts.pdf (201 pages, 1000268 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm (+20) The `@texttt Depends[]@textrm (+20) '[], `@texttt Imports[]@tex trm (+20) '[], `@texttt Suggests[]@textrm (+20) '[], `@texttt Enhances[]@textrm (+20) '[], `@texttt LinkingTo[]@textrm (+20) '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1539--1539 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1540--1540 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2603--2603 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2605--2605 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2846--2849 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2924--2924 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2947--2953 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3037--3041 @textrm (+20) ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manu al/ cmake-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3138--3138 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4762--4762 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4781--4781 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5213--5213 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 (announced 19 20 21)[] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5223--5223 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5225--5225 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5226--5226 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5241--5241 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5755--5758 @texttt gcc/ C-Extensions. html[][][] @textrm (+20) and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5979--5979 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6092--6093 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6543--6553 []@textrm (+20) R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-project. org[]@textrm (+20) )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7595--7602 []@textrm (+20) The two com-monly used sim-ple forms are @texttt \figure{@textt tsl filename@texttt }[] @textrm (+20) and [87] [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9059--9068 []@texttt debug[] @textrm (+20) can be used for hid-den func-tions and S3 meth- ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9328--9340 @textrm (+20) See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual . html# controlling-code-generation[][][]@textrm (+20) , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9344--9345 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9483--9483 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9516--9518 []@textrm (+20) This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9662--9662 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [111] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 10032--10034 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10089--10089 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10108--10108 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10119--10119 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10149--10149 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11002--11002 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11588--11588 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12598--12602 []@textrm (+20) Functions @texttt any_duplicated[] @textrm (+20) and @texttt an y_duplicated3[] @textrm (+20) are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13694--13694 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13789--13789 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 []@textrm (+20) Passing a variable-length string from C to For-tran is trick-ie r, but Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 [][]@texttt https:// www. intel. com/ content/ www/ us/ en/ develop/ d ocumentation/ Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15835--15841 []@textrm (+20) The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/G raphicsEngine.h[]@textrm (+20) , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16253--16253 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16311--16311 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16826--16833 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm (+20) from an ad-min-i s-tra-tive in-stall and [194] [195] (Function and variable index) [196] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.vrs [197] [198] [199] [200]) (Concept index) [201] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.cps [202]) [203] ) (see the transcript file for additional information) Output written on R-exts.pdf (209 pages, 1075758 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 500--503 []@textrm (+20) The `@texttt Depends[]@textrm (+20) '[], `@texttt Imports[]@tex trm (+20) '[], `@texttt Suggests[]@textrm (+20) '[], `@texttt Enhances[]@textrm (+20) '[], `@texttt LinkingTo[]@textrm (+20) '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1539--1539 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1540--1540 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2603--2603 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2605--2605 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [30] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2846--2849 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2924--2924 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2947--2953 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Underfull \hbox (badness 10000) in paragraph at lines 3037--3041 @textrm (+20) ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manu al/ cmake-env-variables. 7. html# [35] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3138--3138 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4762--4762 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4781--4781 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [54] [55] [56] [57] [58] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5213--5213 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 (announced 19 20 21)[] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5223--5223 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5225--5225 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5226--5226 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5241--5241 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [59] [60] [61] [62] [63] [64] Underfull \hbox (badness 10000) in paragraph at lines 5755--5758 @texttt gcc/ C-Extensions. html[][][] @textrm (+20) and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [65] [66] [67] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5979--5979 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [68] Underfull \hbox (badness 10000) in paragraph at lines 6092--6093 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [69] [70] [71] [72] [73] Underfull \hbox (badness 10000) in paragraph at lines 6543--6553 []@textrm (+20) R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-project. org[]@textrm (+20) )[][]) and RForge Chapter 2 [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] Underfull \hbox (badness 10000) in paragraph at lines 7595--7602 []@textrm (+20) The two com-monly used sim-ple forms are @texttt \figure{@textt tsl filename@texttt }[] @textrm (+20) and [87] [88] [89] [90] [91] Chapter 3 [92] [93] [94] [95] [96] [97] [98] Chapter 4 [99] [100] [101] [102] [103] [104] Underfull \hbox (badness 10000) in paragraph at lines 9059--9068 []@texttt debug[] @textrm (+20) can be used for hid-den func-tions and S3 meth- ods by e.g. [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9328--9340 @textrm (+20) See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual . html# controlling-code-generation[][][]@textrm (+20) , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9344--9345 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [108] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9483--9483 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [109] Underfull \hbox (badness 10000) in paragraph at lines 9516--9518 []@textrm (+20) This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [110] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9662--9662 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [111] [112] [113] [114] [115] Underfull \hbox (badness 10000) in paragraph at lines 10032--10034 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [116] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10089--10089 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10108--10108 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10119--10119 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10149--10149 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11002--11002 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11588--11588 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] Underfull \hbox (badness 10000) in paragraph at lines 12598--12602 []@textrm (+20) Functions @texttt any_duplicated[] @textrm (+20) and @texttt an y_duplicated3[] @textrm (+20) are fast ver-sions of R's [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] Overfull \hbox (22.06111pt too wide) in paragraph at lines 13694--13694 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [157] Overfull \hbox (50.80455pt too wide) in paragraph at lines 13789--13789 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [158] Chapter 6 [159] [160] [161] [162] [163] [164] [165] Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 []@textrm (+20) Passing a variable-length string from C to For-tran is trick-ie r, but Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 [][]@texttt https:// www. intel. com/ content/ www/ us/ en/ develop/ d ocumentation/ Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 @texttt fortran-compiler-oneapi-dev-guide-and-reference/ top/ compiler-refere nce/ Underfull \hbox (badness 10000) in paragraph at lines 14542--14547 @texttt mixed-language-programming/ standard-tools-for-interoperability/ bind . html[][][] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] Warning: unbalanced parentheses in @def... [176] [177] [178] [179] [180] [181] Underfull \hbox (badness 10000) in paragraph at lines 15835--15841 []@textrm (+20) The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/G raphicsEngine.h[]@textrm (+20) , @texttt R_ Chapter 7 [182] [183] Chapter 8 [184] [185] [186] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16253--16253 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [187] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16311--16311 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [188] [189] [190] [191] [192] [193] Underfull \hbox (badness 10000) in paragraph at lines 16826--16833 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm (+20) from an ad-min-i s-tra-tive in-stall and [194] [195] (Function and variable index) [196] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.vrs [197] [198] [199] [200]) (Concept index) [201] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-exts.cps [202]) [203] ) (see the transcript file for additional information) Output written on R-exts.pdf (209 pages, 1075790 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi @setfilename R-intro.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm (+20) Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\fil e[] @textrm (+20) and [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] No file R-intro.vrs. Appendix E [92] No file R-intro.cps. Appendix F [93] [94] ) (see the transcript file for additional information) Output written on R-intro.pdf (97 pages, 585782 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm (+20) Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\fil e[] @textrm (+20) and [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.vrs [92] [93]) Appendix E [94] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.cps [95]) Appendix F [96] [97] ) (see the transcript file for additional information) Output written on R-intro.pdf (103 pages, 642725 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm (+20) Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\fil e[] @textrm (+20) and [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.vrs [92] [93]) Appendix E [94] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-intro.cps [95]) Appendix F [96] [97] ) (see the transcript file for additional information) Output written on R-intro.pdf (103 pages, 642745 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-ints.texi @setfilename R-ints.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1501--1501 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1502--1502 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1503--1503 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1504--1504 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3955--3959 []@textrm (+20) If true, make use of the [][]@textbf (+20) codetools @textrm ( +20) (@texttt https:// CRAN. R-project. org/ [47] Underfull \hbox (badness 7595) in paragraph at lines 3989--3994 @textrm (+20) the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor- rect choice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] No file R-ints.vrs. (Concept index) [66] No file R-ints.cps. [67] ) (see the transcript file for additional information) Output written on R-ints.pdf (70 pages, 428173 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1501--1501 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1502--1502 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1503--1503 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1504--1504 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3955--3959 []@textrm (+20) If true, make use of the [][]@textbf (+20) codetools @textrm ( +20) (@texttt https:// CRAN. R-project. org/ [47] Underfull \hbox (badness 7595) in paragraph at lines 3989--3994 @textrm (+20) the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor- rect choice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 479690 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1501--1501 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1502--1502 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1503--1503 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1504--1504 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3955--3959 []@textrm (+20) If true, make use of the [][]@textbf (+20) codetools @textrm ( +20) (@texttt https:// CRAN. R-project. org/ [47] Underfull \hbox (badness 7595) in paragraph at lines 3989--3994 @textrm (+20) the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor- rect choice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 479716 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-lang.texi @setfilename R-lang.info This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (7.14096pt too wide) in paragraph at lines 293--294 @textbf (-20) storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] Chapter 6 [30] [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 7186) in paragraph at lines 4353--4355 []@textrm (+20) Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] No file R-lang.vrs. (Concept Index) [52] No file R-lang.cps. Appendix A [53] [54] ) (see the transcript file for additional information) Output written on R-lang.pdf (57 pages, 336114 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (7.14096pt too wide) in paragraph at lines 293--294 @textbf (-20) storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] Chapter 6 [30] [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 7186) in paragraph at lines 4353--4355 []@textrm (+20) Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 384547 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2021) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.2.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.2.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.2.2/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (7.14096pt too wide) in paragraph at lines 293--294 @textbf (-20) storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] Chapter 6 [30] [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 7186) in paragraph at lines 4353--4355 []@textrm (+20) Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.2.2/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 384543 bytes). Transcript written on R-lang.log. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc' + make compact-pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' compacting PDF manuals in doc/manual make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' + make info make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-admin.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-data.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-exts.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-intro.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-ints.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-lang.texi make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc' + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + mv doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + mv doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/FAQ.utf8 doc/FAQ + mv doc/FAQ.utf8 doc/FAQ + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + mv doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + mv doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.TNaQZs + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 ++ dirname /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.2.2 + make DESTDIR=/builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 install install-pdf install-info mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/m4' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/tools' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc' installing doc ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/man/man1 make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/html' installing doc/html ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R/html make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' installing doc/manual ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R/manual mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R/manual/images make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/etc' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/etc installing etc ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/share' installing share ... mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/R mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/dictionaries mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/encodings mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/java mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/licenses mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/make mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/Rd mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/Rd/macros mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/sh mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/texmf mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/texmf/bibtex/bib mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/texmf/bibtex/bst mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/texmf/tex/latex make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/scripts' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/bin mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/include' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/include/R make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/include/R_ext' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/include/R/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/blas' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/tre' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/tre' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/tzone' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/tzone' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/xdr' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/xdr' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/extra/intl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra/intl' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/appl' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/nmath' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/usr/lib64/R"' \ -o Rscript ./Rscript.c mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/pkgconfig make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/exec make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/main' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/lib make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/modules make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/library' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library installing packages ... building HTML index ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/tests' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tests' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' installing R manuals in PDF format ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/doc/manual' mkdir -p -- /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/info /usr/bin/install -c -m 644 "./dir" "/builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/info" installing R info pages ... updating '/usr/share/info/dir' ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/doc/manual' + rm -f /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/info/dir + mkdir -p /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R + install -p CAPABILITIES /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R + cd src/nmath/standalone + make install DESTDIR=/builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/src/include' + mkdir -p /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/etc/ld.so.conf.d + echo /usr/lib64/R/lib + mkdir -p /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/library + touch -r README /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R/CAPABILITIES + touch -r README doc/manual/R-FAQ.pdf doc/manual/R-admin.pdf doc/manual/R-data.pdf doc/manual/R-exts.pdf doc/manual/R-intro.pdf doc/manual/R-ints.pdf doc/manual/R-lang.pdf doc/manual/fullrefman.pdf + touch -r README /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/bin/R + sed -i 's|\..\/\..|/usr/lib64/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R/html/packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/bkde.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/bkde2D.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/bkfe.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/dpih.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/dpik.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/dpill.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/locpoly.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Aids2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Animals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Boston.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Cars93.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Cushings.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/DDT.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/GAGurine.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Insurance.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/MASS-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Melanoma.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Null.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/OME.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Pima.tr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Rabbit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Rubber.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/SP500.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Sitka.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Sitka89.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Skye.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Traffic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/UScereal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/UScrime.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/VA.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/abbey.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/accdeaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/addterm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/anorexia.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/anova.negbin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/area.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/bacteria.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/bandwidth.nrd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/bcv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/beav1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/beav2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/biopsy.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/birthwt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/boxcox.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cabbages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/caith.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cats.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cement.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/chem.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/con2tr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/confint.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/contr.sdif.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/coop.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/corresp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cov.rob.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cov.trob.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cpus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/crabs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/deaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/denumerate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/dose.p.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/drivers.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/dropterm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/eagles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/epil.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/eqscplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/farms.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/fgl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/fitdistr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/forbes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/fractions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/galaxies.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gamma.dispersion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gamma.shape.glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gehan.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/genotype.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/geyser.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gilgais.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ginv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/glm.convert.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/glm.nb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/glmmPQL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/hills.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/hist.scott.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/housing.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/huber.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/hubers.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/immer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/isoMDS.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/kde2d.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lda.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ldahist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/leuk.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lm.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lm.ridge.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/loglm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/loglm1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/logtrans.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lqs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mammals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mca.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mcycle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/menarche.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/michelson.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/minn38.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/motors.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/muscle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mvrnorm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/negative.binomial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/newcomb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/nlschools.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/npk.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/npr1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/oats.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/painters.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/pairs.lda.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/parcoord.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/petrol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/phones.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/plot.lda.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/plot.mca.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/plot.profile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/polr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.glmmPQL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.lda.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.lqs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.mca.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.qda.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/profile.glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/qda.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/quine.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rational.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/renumerate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rlm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rms.curv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rnegbin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/road.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rotifer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/sammon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ships.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/shoes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/shrimp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/shuttle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/snails.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/stdres.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/steam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/stepAIC.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/stormer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/studres.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/summary.loglm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/summary.negbin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/summary.rlm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/survey.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/synth.tr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/theta.md.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/topo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/truehist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ucv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/waders.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/whiteside.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/width.SJ.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/write.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/wtloss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/BunchKaufman-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/CAex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/CHMfactor-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Cholesky-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Cholesky.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/CsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Diagonal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Hilbert.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/KNex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/KhatriRao.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/LU-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Matrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/MatrixClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/MatrixFactorization-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/RsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Schur-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Schur.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/SparseM-conv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Subassign-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/TsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/USCounties.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Xtrct-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/abIndex-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/abIseq.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/all-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/all.equal-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/atomicVector-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/band.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/bandSparse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/bdiag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/boolean-matprod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/cBind.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/chol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/chol2inv-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/colSums.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/compMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/condest.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ddenseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ddiMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/denseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgCMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgRMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgTMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgeMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/diagU2N.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/diagonalMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dmperm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dpoMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/drop0.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsCMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsRMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsyMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtCMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtRMatrix-class-def.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtpMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtrMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/expand.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/expm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/externalFormats.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/facmul.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/forceSymmetric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/formatSparseM.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/generalMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/graph2T.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/image-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/indMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/index-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/invPerm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/is.na-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/is.null.DN.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/isSymmetric-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/isTriangular.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/kronecker-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ldenseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ldiMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lgeMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lsparseMatrix-classes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lsyMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ltrMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lu.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/mat2triplet.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/matrix-products.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ndenseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nearPD.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ngeMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nnzero.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/norm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nsparseMatrix-classes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nsyMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ntrMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/number-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/pMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/packedMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/printSpMatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/qr-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rankMatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rcond.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rep2abI.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/replValue-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rleDiff-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rsparsematrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/solve-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/spMatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparse.model.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseLU-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseMatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseQR-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseVector-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseVector.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/symmetricMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/symmpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/triangularMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/uniqTsparse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/unpack.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/unpackedMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/unused-classes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/updown.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/wrld_1deg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Arithmetic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/AsIs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Bessel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/CallExternal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Colon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Comparison.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Constants.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Cstack_info.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/DateTimeClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Dates.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Encoding.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/EnvVar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extract.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extract.factor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extract.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extremes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Foreign-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Foreign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Hyperbolic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ISOdatetime.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/InternalMethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/La_library.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/La_version.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Last.value.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Log.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Logic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/LongVectors.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/MathFun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Memory-limits.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Memory.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/NA.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/NULL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/NumericConstants.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Ops.Date.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Paren.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Platform.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Primitive.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Quotes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Random-user.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Random.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/RdUtils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Recall.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Reserved.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Rhome.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Round.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/S3method.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Signals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Special.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/StackOverflows.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Startup.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Syntax.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.getenv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.getpid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.glob.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.info.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.localeconv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.readlink.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.setFileTime.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.setenv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.sleep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.time.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.which.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Trig.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/UTF8filepaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/UseMethod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Vectorize.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Version.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/abbreviate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/agrep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/all.equal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/all.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/allnames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/any.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/aperm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/append.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/apply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/args.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/array.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.Date.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.POSIXlt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.environment.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.function.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/asplit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/assign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/assignOps.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/attach.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/attr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/attributes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/autoload.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/backsolve.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/basename.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bincode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bindenv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bitwise.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/body.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bquote.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/browser.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/browserText.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/builtins.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/by.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/c.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/call.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/callCC.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/capabilities.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cbind.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/char.expand.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/character.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/charmatch.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chartr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chkDots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chol2inv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/col.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/colSums.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/colnames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/commandArgs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/comment.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/complex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/conditions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/conflicts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/connections.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/contributors.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/copyright.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/crossprod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cumsum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/curlGetHeaders.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cut.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cut.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/data.class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/data.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/data.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dataframeHelpers.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/date.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dcf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/debug.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/delayedAssign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/deparse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/deparseOpts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/det.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/detach.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dev.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/diag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/diff.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/difftime.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dimnames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/do.call.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dontCheck.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/double.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dput.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/drop.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/droplevels.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dump.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/duplicated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dynload.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/eapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/eigen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/encodeString.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/environment.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/eval.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/exists.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/expand.grid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/expression.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/extSoftVersion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/factor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.access.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.choose.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.info.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.path.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.show.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/files.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/files2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/find.package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/findInterval.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/force.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/forceAndCall.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/formals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/format.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/format.info.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/format.pval.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/formatDL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/formatc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/function.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/funprog.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gc.time.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gctorture.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/get.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getCallingDLL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getDLLRegisteredRoutines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getLoadedDLLs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getNativeSymbolInfo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gettext.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getwd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/grep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/grepRaw.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/groupGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/grouping.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gzcon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/hexmode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/iconv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/icuSetCollate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/identical.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/identity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ifelse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/integer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/interaction.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/interactive.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/invisible.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.finite.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.function.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.language.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.recursive.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.single.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.unsorted.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/isR.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/isS4.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/isSymmetric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/jitter.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/kappa.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/kronecker.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/l10n_info.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/labels.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lazyload.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/length.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lengths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/levels.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/libPaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/libcurlVersion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/library.dynam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/library.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/license.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list.files.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list2DF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list2env.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/load.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/locales.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/logical.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lower.tri.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/make.names.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/make.unique.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/marginSums.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mat.or.vec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.arg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.call.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.fun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/matmult.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/maxCol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mean.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/memCompress.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/memlimits.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/memory.profile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/merge.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/message.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/missing.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mtfrm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/name.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/names.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nargs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nchar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nlevels.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/noquote.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/norm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/normalizePath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/notyet.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nrow.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-dblcolon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-hooks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-load.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-reflect.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-topenv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/numeric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/numeric_version.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/octmode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/on.exit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/order.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/outer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/parse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/paste.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/path.expand.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pcre_config.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pipeOp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/plot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pmatch.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/polyroot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pos.to.env.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pretty.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/print.dataframe.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/print.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/print.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/prmatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/proc.time.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/prod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/proportions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pushBack.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/qr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/qraux.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/quit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/range.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rank.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/raw.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rawConnection.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rawConversion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readBin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readChar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readLines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readRDS.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readRenviron.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/reg.finalizer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/regex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/regmatches.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/replace.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rev.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/round.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/row.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/row.names.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rowsum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sQuote.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sample.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/save.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/scale.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/scan.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/search.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seek.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seq.Date.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seq.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seq.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sequence.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/serialize.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/setTimeLimit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sets.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/shQuote.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/showConnections.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sink.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/slice.index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/slotOp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/socketSelect.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/solve.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sort.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/source.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/split.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sprintf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/srcfile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/standardGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/startsWith.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/stop.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/stopifnot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strptime.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strrep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strsplit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strtoi.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strtrim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/structure.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strwrap.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/subset.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/substitute.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/substr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/summary.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/svd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sweep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/switch.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sys.parent.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sys.source.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system.file.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system.time.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/t.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/table.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tabulate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/taskCallback.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/taskCallbackManager.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/taskCallbackNames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tempfile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/textconnections.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tilde.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/timezones.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/toString.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/trace.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/traceback.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tracemem.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/transform.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/trimws.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/try.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/typeof.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unique.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unlink.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unlist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unname.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/userhooks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/utf8Conversion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/validUTF8.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/vector.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/warning.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/warnings.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/weekday.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/which.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/which.min.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/with.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/withVisible.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/write.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/writeLines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/xtfrm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zMachine.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zScript.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zapsmall.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zpackages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zutils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/EEF.profile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/Imp.Estimates.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/abc.ci.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/acme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/aids.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/aircondit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/amis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/aml.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/beaver.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/bigcity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot-practicals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot.array.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot.ci.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/brambles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/breslow.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/calcium.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cane.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/capability.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/catsM.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cav.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cd4.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cd4.nested.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/censboot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/channing.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/claridge.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cloth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/co.transfer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/coal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/corr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cum3.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cv.glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/darwin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/dogs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/downs.bc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/ducks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/empinf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/envelope.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/exp.tilt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/fir.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/freq.array.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/frets.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/glm.diag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/glm.diag.plots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/gravity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/hirose.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/imp.weights.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/inv.logit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/islay.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/jack.after.boot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/k3.linear.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/linear.approx.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/lines.saddle.distn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/logit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/manaus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/melanoma.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/motor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/neuro.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/nitrofen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/nodal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/norm.ci.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/nuclear.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/paulsen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/plot.boot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/poisons.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/polar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.boot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.bootci.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.saddle.distn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.simplex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/remission.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/saddle.distn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/saddle.distn.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/saddle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/salinity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/simplex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/simplex.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/smooth.f.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/sunspot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/survival.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tau.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tilt.boot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tsboot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tuna.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/urine.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/var.linear.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/wool.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/SOM.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/batchSOM.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/condense.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/knn.cv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/knn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/knn1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvq1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvq2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvq3.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvqinit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvqtest.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/multiedit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/olvq1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/reduce.nn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/somgrid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/agnes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/agnes.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/agriculture.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/animals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/bannerplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/chorSub.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clara.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clara.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clusGap.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clusplot.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clusplot.partition.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/cluster-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/coef.hclust.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/daisy.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/diana.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/dissimilarity.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/ellipsoidhull.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/fanny.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/fanny.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/flower.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/lower.to.upper.tri.inds.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/medoids.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/mona.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/mona.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pam.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/partition.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plantTraits.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.agnes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.diana.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.mona.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.partition.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pltree.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pluton.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/predict.ellipsoid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.agnes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.clara.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.diana.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.dissimilarity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.fanny.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.mona.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.pam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/ruspini.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/silhouette.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/sizeDiss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.agnes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.clara.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.diana.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.mona.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.pam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/twins.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/volume.ellipsoid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/votes.repub.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/xclara.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/checkUsage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/codetools.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/findGlobals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/showTree.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/compiler/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/compiler/html/compile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/AirPassengers.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/BJsales.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/BOD.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/ChickWeight.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/DNase.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/EuStockMarkets.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Formaldehyde.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/HairEyeColor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Harman23.cor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Harman74.cor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Indometh.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/InsectSprays.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/JohnsonJohnson.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/LakeHuron.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/LifeCycleSavings.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Loblolly.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Nile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Orange.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/OrchardSprays.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/PlantGrowth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Puromycin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Theoph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Titanic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/ToothGrowth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UCBAdmissions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UKDriverDeaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UKLungDeaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UKgas.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USAccDeaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USArrests.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USJudgeRatings.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USPersonalExpenditure.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/VADeaths.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/WWWusage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/WorldPhones.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/ability.cov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/airmiles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/airquality.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/anscombe.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/attenu.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/attitude.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/austres.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/beavers.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/cars.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/chickwts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/co2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/crimtab.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/datasets-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/discoveries.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/esoph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/euro.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/eurodist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/faithful.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/freeny.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/infert.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/iris.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/islands.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/lh.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/longley.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/lynx.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/morley.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/mtcars.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/nhtemp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/nottem.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/npk.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/occupationalStatus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/precip.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/presidents.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/pressure.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/quakes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/randu.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/rivers.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/rock.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sleep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/stackloss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/state.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sunspot.month.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sunspot.year.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sunspots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/swiss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/treering.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/trees.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/uspop.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/volcano.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/warpbreaks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/women.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/zCO2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/lookup.xport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.S.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.arff.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.dbf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.dta.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.epiinfo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.mtp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.octave.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.spss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.ssd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.systat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.xport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.arff.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.dbf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.dta.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.foreign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Devices.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Hershey.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Japanese.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Type1Font.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/adjustcolor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/as.graphicsAnnot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/as.raster.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/axisTicks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/boxplot.stats.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/bringToTop.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/cairo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/cairoSymbolFont.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/check.options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/chull.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/cm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/col2rgb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/colorRamp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/colors.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/contourLines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/convertColor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/densCols.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.capabilities.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.capture.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.flush.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.interactive.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.size.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev2bitmap.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/devAskNewPage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/embedFonts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/extendrange.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/getGraphicsEvent.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/grDevices-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/grSoftVersion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/gray.colors.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/gray.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/hcl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/hsv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/make.rgb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/msgWindow.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/n2mfrow.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/nclass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/palette.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/palettes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pdf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pdf.options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pictex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/plotmath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/png.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/postscript.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/postscriptFonts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pretty.Date.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/ps.options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/quartz.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/quartzFonts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/recordGraphics.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/recordplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/rgb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/rgb2hsv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/savePlot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/trans3d.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/windows.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/windows.options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/windowsFonts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/x11.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/x11Fonts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xfig.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xy.coords.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xyTable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xyz.coords.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/abline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/arrows.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/assocplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/axTicks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/axis.POSIXct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/axis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/barplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/box.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/boxplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/boxplot.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/bxp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/cdplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/clip.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/contour.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/convertXY.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/coplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/curve.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/dotchart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/filled.contour.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/fourfoldplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/graphics-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/graphics-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/grid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/hist.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/hist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/identify.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/image.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/layout.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/legend.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/lines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/locator.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/matplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/mosaicplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/mtext.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/pairs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/panel.smooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/par.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/persp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/pie.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.dataframe.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.design.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.factor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.raster.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.table.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.window.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.xy.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plothistogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/points.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/polygon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/polypath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/rasterImage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/rect.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/rug.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/screen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/segments.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/smoothScatter.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/spineplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/stars.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/stem.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/stripchart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/strwidth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/sunflowerplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/symbols.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/text.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/title.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/units.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/xspline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/zAxis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/Grid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/absolute.size.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/arrow.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/as.mask.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/calcStringMetric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/current.viewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/dataViewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/depth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/deviceLoc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/drawDetails.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/editDetails.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/editViewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/explode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gEdit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gPath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/getNames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gpar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.DLapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.add.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.bezier.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.cap.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.circle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.clip.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.convert.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.copy.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.curve.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.delay.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.display.list.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.draw.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.edit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.force.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.function.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.get.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grab.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grill.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grob.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.group.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.layout.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.lines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.locator.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.ls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.move.to.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.newpage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.null.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.pack.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.path.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.place.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.plot.and.legend.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.points.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.polygon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.pretty.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.raster.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.record.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.rect.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.refresh.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.remove.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.reorder.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.roundrect.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.segments.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.set.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.show.layout.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.show.viewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.stroke.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.text.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.xaxis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.xspline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.yaxis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gridCoords.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobCoords.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobName.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobWidth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobX.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/legendGrob.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/makeContent.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/patterns.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/plotViewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/resolveRasterSize.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/showGrob.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/showViewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/stringWidth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.c.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.length.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.pmin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.rep.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unitType.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/valid.just.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/validDetails.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/viewport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/viewportTransform.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/viewports.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/vpPath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/widthDetails.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/xDetails.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/xsplinePoints.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/Lattice.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/Rows.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/USMortality.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/axis.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/banking.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/barchart.table.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/barley.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/cloud.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/draw.colorkey.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/draw.key.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/environmental.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/ethanol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/histogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/interaction.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/lattice.options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/latticeParseFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/level.colors.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/levelplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/llines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/lset.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/make.groups.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/melanoma.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/oneway.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/packet.panel.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.axis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.barchart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.bwplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.cloud.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.densityplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.dotplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.functions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.histogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.levelplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.loess.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.number.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.pairs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.parallel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.qqmath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.qqmathline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.smoothScatter.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.spline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.stripplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.superpose.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.violin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.xyplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/prepanel.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/prepanel.functions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/print.trellis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/qq.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/qqmath.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/rfs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/shingles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/simpleKey.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/simpleTheme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/singer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/splom.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/strip.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/tmd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/trellis.device.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/trellis.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/trellis.par.get.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/update.trellis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/utilities.3d.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/xyplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/xyplot.ts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/BasicClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Classes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Classes_Details.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Documentation.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/EmptyMethodsList-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/EnvironmentClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/GenericFunctions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Introduction.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/LanguageClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/LinearMethodsList-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodDefinition-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodSupport.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodWithNext-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodsList-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodsList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods_Details.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods_for_Nongenerics.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods_for_S3.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/NextMethod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/ObjectsWithPackage-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/RClassUtils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/RMethodUtils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/S3Part.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/S4groupGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/SClassExtension-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/StructureClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/TraceClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/as.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/callGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/canCoerce.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/cbind2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/className.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/classRepresentation-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/classesToAM.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/dotsMethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/evalSource.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/findClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/findMethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/fixPrevious.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/genericFunction-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/getClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/getMethod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/getPackageName.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/hasArg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/implicitGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/inheritedSlotNames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/initialize-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/is.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/isSealedMethod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/languageEl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/localRefClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/method.skeleton.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methodUtilities.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methods-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methods-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methods-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/new.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/nonStructure-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/promptClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/promptMethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/refClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/removeMethod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/representation.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/selectSuperClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setAs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setClassUnion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setGroupGeneric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setIs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setLoadActions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setMethod.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setOldClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setSClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/show.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/showMethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/signature-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/slot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/stdRefClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/substituteDirect.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/testInheritedMethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/validObject.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/zBasicFunsList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Beta.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/FFdes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Predict.matrix.cr.smooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Predict.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Predict.matrix.soap.film.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Rrank.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Sl.initial.repara.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Sl.repara.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Sl.setup.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Tweedie.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/XWXd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/anova.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bam.update.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bandchol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/blas.thread.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bug.reports.mgcv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/cSplineDes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/chol.down.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/choose.k.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/cnorm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/columb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/concurvity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/coxpht.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/dDeta.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/dpnorm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/exclude.too.far.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/extract.lme.cov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/factor.smooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/family.mgcv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/fix.family.link.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/fixDependence.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/formXtViX.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/formula.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/fs.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/full.score.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.check.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.convergence.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.fit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.fit3.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.fit5.post.proc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.mh.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.models.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.outer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.reparam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.scale.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.selection.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.side.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.vcomp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam2objective.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamObject.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamSim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamlss.etamu.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamlss.gH.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gammals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gaulss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/get.var.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gevlss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ginla.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gumbls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/identifiability.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/in.out.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/inSide.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/influence.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/initial.sp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/interpret.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/jagam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/k.check.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ldTweedie.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ldetS.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/linear.functional.terms.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/logLik.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ls.size.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/magic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/magic.post.proc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mgcv-FAQ.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mgcv-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mgcv-parallel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mini.roots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/missing.data.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/model.matrix.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mono.con.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mroot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/multinom.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mvn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/negbin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/new.name.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/notExp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/notExp2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/null.space.dimension.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ocat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/one.se.rule.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/pcls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/pdIdnot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/pdTens.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/pen.edf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/place.knots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/plot.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/polys.plot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/predict.bam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/predict.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/print.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/psum.chisq.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/qq.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/rTweedie.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/random.effects.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/residuals.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/rig.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/rmvn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/s.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/scat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/sdiag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/shash.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/single.index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/slanczos.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.ad.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.bs.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.cr.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.ds.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.fs.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.gp.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.mrf.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.ps.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.re.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.so.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.sos.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.sz.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.t2.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.tensor.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.tp.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.info.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.terms.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth2random.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smoothCon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/sp.vcov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/spasm.construct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/step.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/summary.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/t2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/te.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/tensor.prod.model.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/totalPenaltySpace.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/trichol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/trind.generator.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/twlss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/uniquecombs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/vcov.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/vis.gam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ziP.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ziplss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ACF.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ACF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ACF.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Alfalfa.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Assay.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/BodyWeight.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Cefamandole.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Coef.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Covariate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Covariate.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dialyzer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.corSpatial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Earthquake.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Extract.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Fatigue.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Gasoline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Glucose.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Glucose2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Gun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/IGF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/LDEsysMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Machines.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/MathAchSchool.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/MathAchieve.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Matrix.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Matrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Meat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Milk.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Muscle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Nitrendipene.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Oats.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Orthodont.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Ovary.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Oxboys.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Oxide.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/PBG.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Phenobarb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Pixel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Quinidine.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Rail.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/RatPupWeight.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Relaxin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Remifentanil.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Soybean.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Spruce.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Tetracycline1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Tetracycline2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/VarCorr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corExp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corGaus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corLin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corRatio.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corSpatial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corSpher.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.default.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Wafer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Wheat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Wheat2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/allCoef.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/anova.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/anova.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/as.matrix.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/as.matrix.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/as.matrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/asOneFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/asTable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/augPred.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/balancedGrouped.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/bdf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.gnls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/collapse.groupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/collapse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/compareFits.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/comparePred.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corAR1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corARMA.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corCAR1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corCompSymm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corExp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corFactor.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corFactor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corGaus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corLin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corNatural.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corRatio.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corSpatial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corSpher.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corSymm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ergoStool.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fdHess.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.nlmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fixed.effects.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fixef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/formula.pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/formula.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/formula.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariateFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroupsFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getResponse.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getResponseFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getVarCov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gls-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/glsControl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/glsObject.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnlsControl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnlsObject.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/groupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gsummary.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/isBalanced.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/isInitialized.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmList.groupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lme.groupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lme.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmeControl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmeObject.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.gnls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/model.matrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/needUpdate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/needUpdate.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlme.nlsList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlmeControl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlmeObject.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlsList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlsList.selfStart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pairs.compareFits.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pairs.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pairs.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdCompSymm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdConstruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdConstruct.pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdDiag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdFactor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdFactor.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdIdent.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdLogChol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdMatrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdMatrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdNatural.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdSymm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/phenoModel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.ACF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.Variogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.augPred.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.compareFits.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.intervals.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.nffGroupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.nfnGroupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.nmGroupedData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.ranef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.ranef.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pooledSD.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.gnls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.nlme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/print.summary.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/print.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/qqnorm.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/qqnorm.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/quinModel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/random.effects.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ranef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ranef.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.nlmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/simulate.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/solve.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/solve.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/splitFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.lmList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.lme.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.nlsList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/update.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/update.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varComb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varConstPower.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varConstProp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varExp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varFixed.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varFunc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varIdent.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varPower.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varWeights.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varWeights.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varWeights.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/class.ind.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/multinom.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/nnet.Hess.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/nnet.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/predict.nnet.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/which.is.max.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/RngStream.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/children.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/clusterApply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/detectCores.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/makeCluster.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mcaffinity.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mcfork.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mclapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mcparallel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/parallel-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/pvec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/splitIndices.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/car.test.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/car90.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/cu.summary.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/kyphosis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/labels.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/meanvar.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/na.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/path.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/plot.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/plotcp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/post.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/predict.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/print.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/printcp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/prune.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/residuals.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.exp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rsq.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/snip.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/solder.balance.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/stagec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/summary.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/text.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/xpred.rpart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Kaver.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Kenvl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Kfn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Psim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/SSI.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Strauss.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/anova.trls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/correlogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/expcov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/ppgetregion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/ppinit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/pplik.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/ppregion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/predict.trls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/prmat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/semat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/surf.gls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/surf.ls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/trls.influence.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/trmat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/variogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/asVector.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/backSpline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/bs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/interpSpline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/ns.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/periodicSpline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/polySpline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/predict.bSpline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/predict.bs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splineDesign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splineKnots.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splineOrder.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splines-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/xyVector.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/AIC.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ARMAacf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ARMAtoMA.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Beta.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Binomial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Cauchy.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Chisquare.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Distributions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Exponential.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Fdist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/GammaDist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Geometric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/HoltWinters.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Hypergeometric.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/IQR.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/KalmanLike.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Logistic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Lognormal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Multinom.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstAsymptotic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstClosestX.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstLfAsymptote.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstRtAsymptote.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NegBinomial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Normal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Pair.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Poisson.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSD.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSasymp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSasympOff.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSasympOrig.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSbiexp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSfol.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSfpl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSgompertz.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSlogis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSmicmen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSweibull.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SignRank.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Smirnov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/StructTS.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/TDist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Tukey.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/TukeyHSD.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Uniform.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Weibull.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Wilcoxon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/acf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/acf2AR.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/add1.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/addmargins.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/aggregate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/alias.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.lm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.mlm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ansari.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/aov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/approxfun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ar.ols.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/arima.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/arima.sim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/arima0.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/as.hclust.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/asOneSidedFormula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ave.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/bandwidth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/bartlett.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/binom.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/biplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/biplot.princomp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/birthday.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/box.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cancor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/case.names.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/checkMFClasses.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/chisq.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cmdscale.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/coef.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/complete.cases.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/confint.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/constrOptim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/contrast.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/contrasts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/convolve.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cophenetic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cor.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cov.wt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cpgram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cutree.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/decompose.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/delete.response.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dendrapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dendrogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/density.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/deriv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/deviance.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/df.residual.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/diffinv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dummy.coef.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ecdf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/eff.aovlist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/effects.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/embed.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/expand.model.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/extractAIC.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/factanal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/factor.scope.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/family.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fft.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/filter.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fisher.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fitted.values.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fivenum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fligner.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/formula.nls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/friedman.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ftable.formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ftable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/getInitial.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/glm.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/glm.summaries.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/hclust.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/heatmap.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/identify.hclust.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/influence.measures.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/integrate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/interaction.plot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/is.empty.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/isoreg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kernapply.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kernel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kmeans.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kruskal.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ks.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ksmooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lag.plot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/line.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/listof.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lm.influence.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lm.summaries.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lmfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loadings.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loess.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loess.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/logLik.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loglin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lowess.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ls.diag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ls.print.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lsfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mad.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mahalanobis.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/make.link.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/makepredictcall.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/manova.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mantelhaen.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mauchly.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mcnemar.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/median.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/medpolish.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.extract.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.tables.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/monthplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mood.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/na.action.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/na.contiguous.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/na.fail.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nafns.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/naprint.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nextn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nlm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nlminb.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nls.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nobs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/numericDeriv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/offset.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/oneway.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/optim.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/optimize.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/order.dendrogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/p.adjust.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.prop.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.t.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.table.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.wilcox.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.HoltWinters.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.acf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.density.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.isoreg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.lm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.ppr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.profile.nls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.spec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.stepfun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.ts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/poisson.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/poly.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.anova.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.prop.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.t.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pp.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ppoints.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ppr.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/prcomp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.HoltWinters.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.arima.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.lm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.loess.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.nls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.smooth.spline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/preplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/princomp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/print.power.htest.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/print.ts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/printCoefmat.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/profile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/profile.nls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/proj.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/prop.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/prop.trend.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/qqnorm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/quade.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/quantile.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/r2dtable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/rWishart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/read.ftable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/rect.hclust.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/relevel.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/reorder.dendrogram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/reorder.factor.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/replications.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/reshape.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/residuals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/runmed.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/scatter.smooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/screeplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/sd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/se.contrast.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/selfStart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/setNames.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/shapiro.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/sigma.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/simulate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/smooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/smooth.spline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/smoothEnds.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/sortedXyData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spec.ar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spec.pgram.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spec.taper.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spectrum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/splinefun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/start.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stat.anova.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stats-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stats-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stats-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/step.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stepfun.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stlmethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.aov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.glm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.lm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.manova.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.nls.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.princomp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/supsmu.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/symnum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/t.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/termplot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/terms.formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/terms.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/terms.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/time.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/toeplitz.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts.plot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts.union.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/tsSmooth.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/tsdiag.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/tsp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/uniroot.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/update.formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/update.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/var.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/varimax.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/vcov.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/weighted.mean.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/weighted.residuals.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/weights.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/wilcox.test.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/window.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/xtabs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/zC.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/coef-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/confint-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/logLik-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/mle-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/mle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/plot-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/profile-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/profile.mle-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/show-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/stats4-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/summary-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/summary.mle-class.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/update-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/vcov-methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Surv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Surv2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Surv2data.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Survmethods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aareg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aeqSurv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aggregate.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/agreg.fit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aml.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/anova.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/attrassign.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/basehaz.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/bladder.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/blogit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cch.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cgd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cgd0.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cipoisson.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/clogit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cluster.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/colon.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/concordance.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/concordancefit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cox.zph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.detail.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.wtest.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxphms.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxsurv.fit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/diabetic.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/dsurvreg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/finegray.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/flchain.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/frailty.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/gbsg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/heart.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/is.ratetable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/kidney.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/levels.Surv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/lines.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/logLik.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/logan.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/lung.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/mgus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/mgus2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/model.frame.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/model.matrix.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/myeloid.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/myeloma.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/nafld.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/neardate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/nsk.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/nwtco.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ovarian.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pbc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pbcseq.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/plot.aareg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/plot.cox.zph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/plot.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/predict.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/predict.survreg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.aareg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.summary.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.summary.survexp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.summary.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pseudo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pspline.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pyears.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/quantile.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ratetable.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ratetableDate.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rats.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rats2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/reliability.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/residuals.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/residuals.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/residuals.survreg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/retinopathy.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rhDNase.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ridge.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rotterdam.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/royston.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rttright.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/solder.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/stanford2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/statefig.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/strata.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.aareg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.pyears.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.survexp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survSplit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survcheck.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survdiff.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.fit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.us.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.formula.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.matrix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit0.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfitcoxph.fit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survival-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survival-internal.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survobrien.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.control.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.distributions.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.object.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survregDtest.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/tcut.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/tmerge.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/tobin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/transplant.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/udca.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/untangle.specials.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/uspop2.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/vcov.coxph.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/veteran.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/xtfrm.Surv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/yates.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/yates_setup.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TclInterface.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TkCommands.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TkWidgetcmds.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TkWidgets.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tclServiceMode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tcltk-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tcltk-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tkProgressBar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tkStartGUI.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_choose.dir.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_choose.files.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_messageBox.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_select.list.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tkpager.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/CRANtools.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/HTMLheader.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/HTMLlinks.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/QC.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rcmd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rd2HTML.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rd2txt_options.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/RdTextFilter.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rdiff.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rdindex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rdutils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/SweaveTeXFilter.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/add_datalist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/assertCondition.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/bibstyle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/buildVignette.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/buildVignettes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/charsets.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkFF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkMD5sums.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkPoFiles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkRd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkRdaFiles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkTnF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkVignettes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/check_packages_in_dir.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/codoc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/compactPDF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/delimMatch.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/dependsOnPkgs.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/encoded.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/fileutils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/find_gs_cmd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/getVignetteInfo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/loadRdMacros.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/makeLazyLoading.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/make_translations_pkg.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/makevars.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/md5sum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/package_dependencies.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/package_native_routine_registration_skeleton.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/parseLatex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/parse_Rd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/print.via.format.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/pskill.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/psnice.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/read.00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/showNonASCII.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/startDynamicHelp.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/testInstalledPackage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/texi2dvi.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/toHTML.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/toRd.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/toTitleCase.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/tools-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/tools-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/tools-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/undoc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/updatePACKAGES.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/update_pkg_po.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/userdir.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/vignetteEngine.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/vignetteInfo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/writePACKAGES.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/xgettext.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/BATCH.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/COMPILE.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/DLL.version.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/INSTALL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/LINK.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/PkgUtils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Question.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/REMOVE.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RHOME.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RShowDoc.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RSiteSearch.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rconsole.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rprof.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rprofmem.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rscript.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rtangle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RweaveLatex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/SHLIB.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Sweave.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/SweaveSyntConv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/SweaveUtils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/URLencode.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/View.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/adist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/alarm.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/apropos.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/aregexec.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/arrangeWindows.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/askYesNo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/aspell-utils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/aspell.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/available.packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/bibentry.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/browseEnv.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/browseURL.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/browseVignettes.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/bug.report.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/capture.output.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/changedFiles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/charClass.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/choose.dir.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/choose.files.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/chooseBioCmirror.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/chooseCRANmirror.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/citEntry.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/citation.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/cite.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/clipboard.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/close.socket.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/combn.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/compareVersion.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/contrib.url.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/count.fields.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/create.post.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/data.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/dataentry.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/debugcall.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/debugger.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/demo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/download.file.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/download.packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/edit.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/edit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/example.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/file.edit.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/filetest.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/findCRANmirror.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/findLineNum.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/fix.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/flush.console.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/format.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getAnywhere.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getFromNamespace.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getParseData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getS3method.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getWindowsHandle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getWindowsHandles.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/glob2rx.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/globalVariables.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/hasName.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/hashtab.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/head.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.request.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.search.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.start.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/hsearch-utils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/install.packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/installed.packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/isS3method.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/isS3stdGen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/localeToCharset.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/ls_str.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/maintainer.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/make.packages.html.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/make.socket.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/memory.size.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/menu.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/methods.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/mirrorAdmin.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/modifyList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/news.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/nsl.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/object.size.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/package.skeleton.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/packageDescription.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/packageName.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/packageStatus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/page.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/person.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/process.events.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/prompt.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/promptData.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/promptPackage.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/rcompgen.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.DIF.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.fortran.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.fwf.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.socket.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.table.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/readRegistry.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/recover.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/relist.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/remove.packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/removeSource.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/roman.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/rtags.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/savehistory.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/select.list.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/sessionInfo.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/setRepositories.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/setWindowTitle.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/shortPathName.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/sourceutils.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/stack.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/str.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/strcapture.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/summaryRprof.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/tar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/toLatex.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/txtProgressBar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/type.convert.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/untar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/unzip.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/update.packages.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/url.show.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-defunct.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-package.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/vignette.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/warnErrList.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winDialog.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winMenus.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winProgressBar.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winextras.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/write.table.html + for i in /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/zip.html + chmod +x /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/R/sh/echo.sh + chmod +x /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/BATCH /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/COMPILE /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/INSTALL /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/LINK /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/R /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/REMOVE /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rcmd /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rd2pdf /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rdconv /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rdiff /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rprof /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/SHLIB /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Stangle /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Sweave /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/build /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/check /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/config /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/exec /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/javareconf /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/libtool /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/mkinstalldirs /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/pager /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/rtags + chmod -x /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/CITATION /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/R/CAPABILITIES + '[' '!' -d /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/include ']' ~/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R ~/build/BUILD/R-4.2.2 + pushd /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R + ln -s ../../include/R include + popd ~/build/BUILD/R-4.2.2 + '[' '!' -d /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/texmf/tex/latex/R ']' + mkdir -p /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/texmf/tex/latex + pushd /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/texmf/tex/latex ~/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/texmf/tex/latex ~/build/BUILD/R-4.2.2 + ln -s /usr/share/R/texmf/tex/latex R + popd ~/build/BUILD/R-4.2.2 + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 4.2.2-7.0.riscv64.fc38 --unique-debug-suffix -4.2.2-7.0.riscv64.fc38.riscv64 --unique-debug-src-base R-4.2.2-7.0.riscv64.fc38.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/R-4.2.2 extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/bin/Rscript extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/exec/R extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/lib/libR.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/libs/MASS.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/libs/KernSmooth.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/libs/Matrix.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/libs/cluster.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/libs/class.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/libs/foreign.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/libs/cairo.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/libs/grDevices.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/libs/graphics.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/libs/grid.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/libs/lattice.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/libs/methods.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/libs/mgcv.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/libs/nlme.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/libs/nnet.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/libs/parallel.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/libs/rpart.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/libs/spatial.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/libs/splines.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/libs/stats.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/libs/survival.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/libs/tcltk.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/libs/tools.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/libs/utils.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/modules/R_X11.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/modules/R_de.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/modules/internet.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/modules/lapack.so extracting debug info from /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/libRmath.so original debug info size: 32300kB, size after compression: 30836kB /usr/bin/sepdebugcrcfix: Updated 33 CRC32s, 0 CRC32s did match. 20120 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/bin/true + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.cux4xG + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.2.2 + ulimit -s 16384 + TZ=Europe/Paris + make check make[1]: Entering directory '/builddir/build/BUILD/R-4.2.2/tests' make[2]: Entering directory '/builddir/build/BUILD/R-4.2.2/tests' make[3]: Entering directory '/builddir/build/BUILD/R-4.2.2/tests/Examples' Testing examples for package 'base' Testing examples for package 'tools' comparing 'tools-Ex.Rout' to 'tools-Ex.Rout.save' ... OK Testing examples for package 'utils' Testing examples for package 'grDevices' comparing 'grDevices-Ex.Rout' to 'grDevices-Ex.Rout.save' ... OK Testing examples for package 'graphics' comparing 'graphics-Ex.Rout' to 'graphics-Ex.Rout.save' ... OK Testing examples for package 'stats' Error: testing 'stats' failed Execution halted make[3]: *** [Makefile:37: test-Examples-Base] Error 1 make[3]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tests/Examples' make[2]: *** [Makefile.common:199: test-Examples] Error 2 make[2]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tests' make[1]: *** [Makefile.common:185: test-all-basics] Error 1 make[1]: Leaving directory '/builddir/build/BUILD/R-4.2.2/tests' make: *** [Makefile:305: check] Error 2 + : + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-4.2.2-7.0.riscv64.fc38.riscv64 Processing files: R-core-4.2.2-7.0.riscv64.fc38.riscv64 warning: Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/bin/Rscript and /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript warning: absolute symlink: /usr/share/texmf/tex/latex/R -> /usr/share/R/texmf/tex/latex Provides: R(ABI) = 4.2 R(KernSmooth) = 2.23.20 R(MASS) = 7.3.58.1 R(Matrix) = 1.5.1 R(base) = 4.2.2 R(boot) = 1.3.28 R(class) = 7.3.20 R(cluster) = 2.1.4 R(codetools) = 0.2.18 R(compiler) = 4.2.2 R(datasets) = 4.2.2 R(foreign) = 0.8.83 R(grDevices) = 4.2.2 R(graphics) = 4.2.2 R(grid) = 4.2.2 R(lattice) = 0.20.45 R(methods) = 4.2.2 R(mgcv) = 1.8.41 R(nlme) = 3.1.160 R(nnet) = 7.3.18 R(parallel) = 4.2.2 R(rpart) = 4.1.19 R(spatial) = 7.3.15 R(splines) = 4.2.2 R(stats) = 4.2.2 R(stats4) = 4.2.2 R(survival) = 3.4.0 R(tcltk) = 4.2.2 R(tools) = 4.2.2 R(translations) = 4.2.2 R(utils) = 4.2.2 R-KernSmooth = 2.23.20 R-MASS = 7.3.58.1 R-Matrix = 1.5.1 R-base = 4.2.2 R-boot = 1.3.28 R-class = 7.3.20 R-cluster = 2.1.4 R-codetools = 0.2.18 R-compiler = 4.2.2 R-core = 4.2.2-7.0.riscv64.fc38 R-core(riscv-64) = 4.2.2-7.0.riscv64.fc38 R-datasets = 4.2.2 R-foreign = 0.8.83 R-grDevices = 4.2.2 R-graphics = 4.2.2 R-grid = 4.2.2 R-lattice = 0.20.45 R-methods = 4.2.2 R-mgcv = 1.8.41 R-nlme = 3.1.160 R-nnet = 7.3.18 R-parallel = 4.2.2 R-rpart = 4.1.19 R-spatial = 7.3.15 R-splines = 4.2.2 R-stats = 4.2.2 R-stats4 = 4.2.2 R-survival = 3.4.0 R-tcltk = 4.2.2 R-tools = 4.2.2 R-translations = 4.2.2 R-utils = 4.2.2 config(R-core) = 4.2.2-7.0.riscv64.fc38 libR.so()(64bit) Requires(interp): /bin/sh /bin/sh /bin/sh Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /bin/sh Requires(postun): /bin/sh Requires(posttrans): /bin/sh Requires: /bin/sh ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libX11.so.6()(64bit) libXmu.so.6()(64bit) libXt.so.6()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libcairo.so.2()(64bit) libcurl.so.4()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgobject-2.0.so.0()(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libicui18n.so.71()(64bit) libicuuc.so.71()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libpango-1.0.so.0()(64bit) libpangocairo-1.0.so.0()(64bit) libpcre2-8.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libreadline.so.8()(64bit) libtcl8.6.so()(64bit) libtiff.so.5()(64bit) libtiff.so.5(LIBTIFF_4.0)(64bit) libtk8.6.so()(64bit) libtre.so.5()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: R-Matrix < 0.999375-7 Recommends: cups Processing files: R-core-devel-4.2.2-7.0.riscv64.fc38.riscv64 Provides: R-Matrix-devel = 1.5.1 R-core-devel = 4.2.2-7.0.riscv64.fc38 R-core-devel(riscv-64) = 4.2.2-7.0.riscv64.fc38 pkgconfig(libR) = 4.2.2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Obsoletes: R-Matrix-devel < 0.999375-7 Processing files: R-devel-4.2.2-7.0.riscv64.fc38.riscv64 Processing files: R-java-4.2.2-7.0.riscv64.fc38.riscv64 Processing files: R-java-devel-4.2.2-7.0.riscv64.fc38.riscv64 Processing files: libRmath-4.2.2-7.0.riscv64.fc38.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.cAlMXW + umask 022 + cd /builddir/build/BUILD + cd R-4.2.2 + DOCDIR=/builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/libRmath + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/libRmath + cp -pr doc/COPYING /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/share/doc/libRmath + RPM_EC=0 ++ jobs -p + exit 0 Provides: libRmath = 4.2.2-7.0.riscv64.fc38 libRmath(riscv-64) = 4.2.2-7.0.riscv64.fc38 libRmath.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: libRmath-devel-4.2.2-7.0.riscv64.fc38.riscv64 Provides: libRmath-devel = 4.2.2-7.0.riscv64.fc38 libRmath-devel(riscv-64) = 4.2.2-7.0.riscv64.fc38 pkgconfig(libRmath) = 4.2.2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Processing files: libRmath-static-4.2.2-7.0.riscv64.fc38.riscv64 Provides: libRmath-static = 4.2.2-7.0.riscv64.fc38 libRmath-static(riscv-64) = 4.2.2-7.0.riscv64.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debugsource-4.2.2-7.0.riscv64.fc38.riscv64 Provides: R-debugsource = 4.2.2-7.0.riscv64.fc38 R-debugsource(riscv-64) = 4.2.2-7.0.riscv64.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debuginfo-4.2.2-7.0.riscv64.fc38.riscv64 Provides: R-debuginfo = 4.2.2-7.0.riscv64.fc38 R-debuginfo(riscv-64) = 4.2.2-7.0.riscv64.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.2.2-7.0.riscv64.fc38 Processing files: R-core-debuginfo-4.2.2-7.0.riscv64.fc38.riscv64 warning: Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib/debug/usr/bin/Rscript-4.2.2-7.0.riscv64.fc38.riscv64.debug and /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib/debug/usr/lib64/R/bin/Rscript-4.2.2-7.0.riscv64.fc38.riscv64.debug Provides: R-core-debuginfo = 4.2.2-7.0.riscv64.fc38 R-core-debuginfo(riscv-64) = 4.2.2-7.0.riscv64.fc38 debuginfo(build-id) = 13f182d4dbdd880f4763292251a5b0b319a06f0c debuginfo(build-id) = 158e9d8d5581e497ab0160e403a1d9efad97bb7c debuginfo(build-id) = 1c9d27d8830e25f064ec613a25e48bfaff1227f2 debuginfo(build-id) = 39c89fe5af208b495c196826dde62f13bbccf18e debuginfo(build-id) = 3e8223016d7b80a194da65d92f89e61ea687a184 debuginfo(build-id) = 42211209cfe4939c6003550fda85d9f30f67e945 debuginfo(build-id) = 479781865286abd4b2313ea4633e3624c70805f6 debuginfo(build-id) = 6129d428399c5e685753ef7fc3cec48b2028f098 debuginfo(build-id) = 66774a27e472087bbeefe8dd9a79a1a3815ea375 debuginfo(build-id) = 77a791bf5eadfdd3edd8c486fa462829d1bd8632 debuginfo(build-id) = 7b782f9dec3469960802372a2c8d1d0696074615 debuginfo(build-id) = 83ef37c8d15bb3d5ac0c99a1c5deae8967833aee debuginfo(build-id) = 86bb30910c15bc54cc06863609c0ca9dca24a3f5 debuginfo(build-id) = 87429e06dff4bacfe4ea470a539ae3166d716228 debuginfo(build-id) = 932133d9cd0eb144cde1402b60ebbcfc1f1783a2 debuginfo(build-id) = 93415745380b757bc405b77eefb5c713ec91effc debuginfo(build-id) = 9c8cd8ad0f3cdd56755014b65c36ed9c6b7aee0c debuginfo(build-id) = a28a74b83cab1af1c3a137d51df8cc49039f47ea debuginfo(build-id) = a29cdecbb955e2a9e99dd7ae9779a459d296cfde debuginfo(build-id) = b3b236e5c275d73dfa4d4778a82c656bfcb9996e debuginfo(build-id) = beac2b24f3919c3ca4f6788dfe1ae4cad1cc6ae7 debuginfo(build-id) = bfd9839a9d98804304a87243d03490babcbe9680 debuginfo(build-id) = c03a3260a84f654c59332f60dbae70494805c041 debuginfo(build-id) = d7f59133e5e11b58a7de43dd33328b2146ea32dc debuginfo(build-id) = d80203d3a437497d021ccb021c844d80d38450cd debuginfo(build-id) = dc8c403497664d0f23f0cb06ba5905e3cba4135a debuginfo(build-id) = f2564db146b88d50625dc63d28d11543037d01ce debuginfo(build-id) = f56107cd0f8764d48847cd96860aacdc3d89a5d0 debuginfo(build-id) = fc9f0c5fc1fbc793bb05e73b4c256f89623a2700 debuginfo(build-id) = fccadeaf8d82b6e170d425ea5bb946ee7b70fb69 debuginfo(build-id) = fea0a6696e885f0f67249f2abf5c61d93af78e43 debuginfo(build-id) = nilnil libR.so-4.2.2-7.0.riscv64.fc38.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.2.2-7.0.riscv64.fc38 Processing files: libRmath-debuginfo-4.2.2-7.0.riscv64.fc38.riscv64 Provides: debuginfo(build-id) = 29b4a1e86eab5434d467e13281aeb789f0c5163b libRmath-debuginfo = 4.2.2-7.0.riscv64.fc38 libRmath-debuginfo(riscv-64) = 4.2.2-7.0.riscv64.fc38 libRmath.so-4.2.2-7.0.riscv64.fc38.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.2.2-7.0.riscv64.fc38 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 Wrote: /builddir/build/RPMS/libRmath-static-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-debuginfo-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-devel-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-debuginfo-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-devel-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-devel-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-java-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-java-devel-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-debugsource-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-debuginfo-4.2.2-7.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-4.2.2-7.0.riscv64.fc38.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.06pbBO + umask 022 + cd /builddir/build/BUILD + cd R-4.2.2 + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Iazn1b + umask 022 + cd /builddir/build/BUILD + rm -rf R-4.2.2 R-4.2.2.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/bin/Rscript and /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript absolute symlink: /usr/share/texmf/tex/latex/R -> /usr/share/R/texmf/tex/latex Duplicate build-ids /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib/debug/usr/bin/Rscript-4.2.2-7.0.riscv64.fc38.riscv64.debug and /builddir/build/BUILDROOT/R-4.2.2-7.0.riscv64.fc38.riscv64/usr/lib/debug/usr/lib64/R/bin/Rscript-4.2.2-7.0.riscv64.fc38.riscv64.debug Child return code was: 0