Mock Version: 2.15
Mock Version: 2.15
Mock Version: 2.15
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/f41-build-843560-162047/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3f8258ec10>timeout=604800uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/nco.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1722384000
Wrote: /builddir/build/SRPMS/nco-5.2.7-1.fc41.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/f41-build-843560-162047/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3f8258ec10>timeout=604800uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/nco.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1722384000
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.kZvrb3
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ test -d /builddir/build/BUILD/nco-5.2.7-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/nco-5.2.7-build
+ /usr/bin/rm -rf /builddir/build/BUILD/nco-5.2.7-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.2.7-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.2.7-build/SPECPARTS
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.k6tSkh
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ rm -rf nco-5.2.7
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/nco-5.2.7.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd nco-5.2.7
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (nco-install_C_headers.patch):'
Patch #0 (nco-install_C_headers.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .install_C_headers --fuzz=0
patching file src/nco/Makefile.in
Hunk #1 succeeded at 791 (offset 24 lines).
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.q9X8j2
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ CFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd nco-5.2.7
+ export CPPFLAGS=-I/usr/include/udunits2
+ CPPFLAGS=-I/usr/include/udunits2
+ CFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' x '!=' x ']'
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./autobld/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./autobld/config.sub
++ basename ./autobld/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./autobld/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './autobld/config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./autobld/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./autobld/config.guess
++ basename ./autobld/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./autobld/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './autobld/config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./autobld/ltmain.sh
++ grep -q runstatedir=DIR ./configure
++ echo --runstatedir=/run
+ ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HAVE_ANTLR=yes --disable-dependency-tracking --includedir=/usr/include/nco
checking build system type... riscv64-redhat-linux-gnu
checking host system type... riscv64-redhat-linux-gnu
checking target system type... riscv64-redhat-linux-gnu
./configure: line 3579: git: command not found
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for a BSD-compatible install... /usr/bin/install -c
checking whether sleep supports fractional seconds... yes
checking filesystem timestamp resolution... 0.01
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking xargs -n works... yes
checking for riscv64-redhat-linux-gnu-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... none needed
checking dependency style of g++... none
checking how to run the C preprocessor... gcc -E
checking how to run the C++ preprocessor... g++ -E
checking for flex... flex
checking for lex output file root... lex.yy
checking for lex library... none needed
checking whether yytext is a pointer... yes
checking whether ln -s works... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert riscv64-redhat-linux-gnu file names to riscv64-redhat-linux-gnu format... func_convert_file_noop
checking how to convert riscv64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for riscv64-redhat-linux-gnu-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for riscv64-redhat-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for riscv64-redhat-linux-gnu-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for riscv64-redhat-linux-gnu-strip... no
checking for strip... strip
checking for riscv64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for riscv64-redhat-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether to enable maintainer-specific portions of Makefiles... no
checking for working memcmp... yes
checking whether lstat correctly handles trailing slash... yes
checking whether stat accepts an empty string... no
checking for working strtod... yes
checking for canonicalize_file_name... yes
checking for creat... yes
checking for floor... no
checking for gethostname... yes
checking for getpagesize... yes
checking for getrusage... yes
checking for memchr... yes
checking for memmove... yes
checking for memset... yes
checking for mkstemp... yes
checking for pow... no
checking for readlink... yes
checking for realpath... yes
checking for regcomp... yes
checking for setlocale... yes
checking for sqrt... no
checking for strchr... yes
checking for strerror... yes
checking for strpbrk... yes
checking for strrchr... yes
checking for strstr... yes
checking for strtol... yes
checking for egrep... (cached) /usr/bin/grep -E
checking for fcntl.h... yes
checking for getopt.h... yes
checking for libintl.h... yes
checking for limits.h... yes
checking for locale.h... yes
checking for netinet/in.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for unistd.h... (cached) yes
checking for cstdlib... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for pid_t... yes
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for uid_t... yes
checking for gid_t... yes
checking for ptrdiff_t... yes
checking size of int*... 8
checking for gcc option to enable large file support... none needed
#################################
#  Test for netCDF             #
################################
checking for netcdf.h... yes
checking for nc_open in -lnetcdf... yes
#################################
#  Test for netCDF4 support     #
#################################
checking for gcc options needed to detect all undeclared functions... none needed
checking whether NC_CHUNKED is declared... yes
configure: netcdf.h contains netCDF4 definitions
checking for nc_def_var_chunking in -lnetcdf... yes
configure: Good news: Simple program compiles and links to netCDF4 library
checking for netcdf_mem.h... yes
checking for gcc option to support OpenMP... -fopenmp
configure: OpenMP support enabled
Beginning generic tests for DAP support
Testing for DAP-netCDF support (is DAP in libnetcdf.a?)...
checking for daperror in -lnetcdf... yes
configure: DAP support enabled
checking for getopt_long... yes
checking for sinf in -lsunmath... no
checking for gettext in -lintl... no
checking for res_init in -lresolv... no
checking for main in -lsocket... no
checking for main in -lthread... no
checking for nco_open in -lnco... no
checking for nc_inq_format... yes
checking for nc_inq_path... yes
checking for nc_set_log_level... yes
checking for nc_rename_grp... yes
checking for getopt... yes
checking for getopt_long... (cached) yes
checking for atan2... no
checking for acosf... no
checking for asinf... no
checking for atanf... no
checking for atan2f... no
checking for cosf... no
checking for expf... no
checking for fabsf... no
checking for fmodf... no
checking for log10f... no
checking for logf... no
checking for powf... no
checking for sinf... no
checking for sqrtf... no
checking for tanf... no
checking for erff... no
checking for erfcf... no
checking for gammaf... no
checking for acoshf... no
checking for asinhf... no
checking for atanhf... no
checking for coshf... no
checking for sinhf... no
checking for tanhf... no
checking for ceilf... no
checking for floorf... no
checking for nearbyint... no
checking for rint... no
checking for round... no
checking for trunc... no
checking for nearbyintf... no
checking for rintf... no
checking for roundf... no
checking for truncf... no
checking for getopt_long... (cached) yes
checking for strdup... yes
checking for strcasecmp... yes
checking for strsep... yes
checking for strcasestr... yes
checking for htonl... yes
checking for htons... yes
checking for ntohl... yes
checking for ntohs... yes
checking for __builtin_bswap16... no
checking for __builtin_bswap32... no
checking for __builtin_bswap64... no
##########################################################
#     Sorting out MacOS build parameters                #
##########################################################
#################################
#  Testing for ANTLR support    #
#################################
checking for runantlr... yes
configure: antlr library was found
checking for antlr/CommonToken.hpp... yes
INFO: ANTLR development support found---will build nco++ directory and ncap2
checking whether NCO C++ interface library libnco_c++ should be built... no
########################################
#     Testing for GSL support          #
########################################
configure: These GSL library and header tests must succeed for GSL support:
checking for gsl_sf_gamma_inc in -lgsl... yes
checking for /usr/include/gsl/gsl_sf_gamma.h... yes
configure: GSL support enabled
########################################
#     Testing for CCR support          #
########################################
checking where to put HDF5 plugins... .
checking whether Community Codec Repository library should be used... no
checking for regex.h... yes
checking for sys/types.h... (cached) yes
checking for regexec... yes
checking for regcomp... (cached) yes
checking for regfree... yes
########################################
#     Testing for UDUNITS2 support     #
########################################
checking for udunits2.h... yes
checking for library containing ut_parse... -ludunits2
configure: UDUnits2 support enabled
checking for ncgen... /usr/bin/ncgen
configure: Creating sample netCDF data files for self-tests
###############################
#    Require Shared Libs?     #
###############################
checking for makeinfo... yes
MAKEINFO_VERSION=7.1
configure: Documentation support enabled
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating data/Makefile
config.status: creating src/Makefile
config.status: creating src/nco/Makefile
config.status: creating man/Makefile
config.status: creating src/nco++/Makefile
config.status: creating doc/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration Parameters:
ANTLR_INC............ 
ANTLR_ROOT........... 
AR_FLAGS............. cru
CC................... gcc
CFLAGS............... -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11
CPP.................. gcc -E
CPPFLAGS............. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include
CXX.................. g++
CXXFLAGS............. -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer 
ENABLE_CCR........... no
ENABLE_DAP........... yes
ENABLE_GSL........... yes
ENABLE_NETCDF4....... yes
ENABLE_OPENMP........ yes
ENABLE_UDUNITS2...... yes
GSL_INC.............. /usr/include
GSL_ROOT............. /usr
HAVE_ANTLR........... yes
HAVE_MAKEINFO........ yes
HAVE_NETCDF4_H....... yes
HDF5_PLUGIN_PATH..... .
HOST................. 
HOSTNAME............. unmatchedbuild11
LDFLAGS.............. -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes 
LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm
NETCDF_INC........... 
NETCDF_ROOT.......... /usr
OPENMP_CFLAGS........ -fopenmp
host................. riscv64-redhat-linux-gnu
install prefix ...... /usr
*******************************************************************
Configuration complete. You are now ready to run 'make'.
Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax).
If the build fails, please examine the file 'configure.eg'
in the top-level NCO directory.  It contains examples known to
build NCO for various platforms and compilers.
*******************************************************************
+ /usr/bin/make -O -j4 V=1 VERBOSE=1
/usr/bin/make  all-recursive
Making all in data
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/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc
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make[2]: /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco/ncks: No such file or directory
make[2]: [Makefile:588: in_4c.nc] Error 127 (ignored)
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/data'
/usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl 
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/usr/bin/ncgen -o big.nc big.cdl 
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/usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl 
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/usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl 
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/usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl 
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/usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl 
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/usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl 
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/usr/bin/ncgen -k netCDF-4 -o in_4.nc in_4.cdl 
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/usr/bin/ncgen -k netCDF-4 -lb -o "file://in_zarr4#mode=nczarr,file" in_zarr4.cdl 
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ln -s -f in_zarr4 h0001
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ln -s -f in_zarr4 h0002
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ln -s -f in_zarr4 h0003
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Making all in src
Making all in nco
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gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncatted.o ncatted.c
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_dmn.c  -fPIC -DPIC -o .libs/nco_cnf_dmn.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_dmn.c -o nco_cnf_dmn.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_cln_utl.lo nco_cln_utl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cln_utl.c  -fPIC -DPIC -o .libs/nco_cln_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cln_utl.c -o nco_cln_utl.o >/dev/null 2>&1
nco_cln_utl.c: In function ‘nco_cln_var_prs’:
nco_cln_utl.c:1339:27: warning: ‘mss_val_flt’ may be used uninitialized [-Wmaybe-uninitialized]
 1339 |       if(var->has_mss_val && var->val.fp[idx] == mss_val_flt){
      |          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_cln_utl.c:1335:11: note: ‘mss_val_flt’ was declared here
 1335 |     float mss_val_flt;
      |           ^~~~~~~~~~~
nco_cln_utl.c:1320:27: warning: ‘mss_val_dbl’ may be used uninitialized [-Wmaybe-uninitialized]
 1320 |       if(var->has_mss_val && var->val.dp[idx] == mss_val_dbl){
      |          ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_cln_utl.c:1316:12: note: ‘mss_val_dbl’ was declared here
 1316 |     double mss_val_dbl;
      |            ^~~~~~~~~~~
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnv_arm.c -o nco_cnv_arm.o >/dev/null 2>&1
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make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
In file included from /usr/include/stdio.h:970,
                 from nco_cnv_csm.h:17,
                 from nco_cnv_csm.c:10:
In function ‘fprintf’,
    inlined from ‘nco_cnv_cf_cll_mth_add’ at nco_cnv_csm.c:517:48:
/usr/include/bits/stdio2.h:111:10: warning: ‘cll_mth_clm’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_cnv_csm.c: In function ‘nco_cnv_cf_cll_mth_add’:
nco_cnv_csm.c:449:9: note: ‘cll_mth_clm’ was declared here
  449 |   char *cll_mth_clm; /* [sng] Cell methods for climatology */
      |         ^~~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_cnf_typ.lo nco_cnf_typ.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_typ.c  -fPIC -DPIC -o .libs/nco_cnf_typ.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnf_typ.c -o nco_cnf_typ.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_crt.lo nco_crt.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_crt.c  -fPIC -DPIC -o .libs/nco_crt.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_crt.c -o nco_crt.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_dbg.lo nco_dbg.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dbg.c  -fPIC -DPIC -o .libs/nco_dbg.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dbg.c -o nco_dbg.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_cnk.lo nco_cnk.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnk.c  -fPIC -DPIC -o .libs/nco_cnk.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_cnk.c -o nco_cnk.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
In file included from /usr/include/stdio.h:970,
                 from nco_cnk.h:18,
                 from nco_cnk.c:45:
In function ‘fprintf’,
    inlined from ‘nco_cnk_sz_set_trv’ at nco_cnk.c:1330:8:
/usr/include/bits/stdio2.h:111:10: warning: ‘prt_sum’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_cnk.c: In function ‘nco_cnk_sz_set_trv’:
nco_cnk.c:1305:12: note: ‘prt_sum’ was declared here
 1305 |     size_t prt_sum; /* [nbr] Partial sum (sum of coefficients times powers of two for higher powers */
      |            ^~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_dmn_utl.lo nco_dmn_utl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dmn_utl.c  -fPIC -DPIC -o .libs/nco_dmn_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_dmn_utl.c -o nco_dmn_utl.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ctl.c  -fPIC -DPIC -o .libs/nco_ctl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ctl.c -o nco_ctl.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_flt.lo nco_flt.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_flt.c  -fPIC -DPIC -o .libs/nco_flt.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_flt.c -o nco_flt.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
nco_flt.c: In function ‘nco_qnt_mtd’:
nco_flt.c:1505:83: warning: comparison between ‘nco_flt_typ_enm’ and ‘enum nco_baa_cnv’ [-Wenum-compare]
 1505 |   if((flg_hdf && nco_flt_hdf_enm == nco_flt_btr) || (flg_baa && ((nco_flt_baa_enm == nco_baa_btr) || (nco_flt_baa_enm == nco_baa_sh2)))) flg_mre=True;
      |                                                                                   ^~
nco_flt.c:1505:119: warning: comparison between ‘nco_flt_typ_enm’ and ‘enum nco_baa_cnv’ [-Wenum-compare]
 1505 |   if((flg_hdf && nco_flt_hdf_enm == nco_flt_btr) || (flg_baa && ((nco_flt_baa_enm == nco_baa_btr) || (nco_flt_baa_enm == nco_baa_sh2)))) flg_mre=True;
      |                                                                                                                       ^~
nco_flt.c:1602:32: warning: operation on ‘aed_ppc_lvl.id’ may be undefined [-Wsequence-point]
 1602 |   aed_ppc_cnt.id=aed_ppc_lvl.id=aed_ppc_lvl.id=var_id;
      |                  ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
nco_flt.c: In function ‘nco_flt_hdf5_prs’:
nco_flt.c:395:28: warning: array subscript ‘unsigned int[0]’ is partly outside array bounds of ‘short int[1]’ [-Warray-bounds=]
  395 |         u32_lst[u32_nbr++]=*ui32p;
      |                            ^~~~~~
nco_flt.c:392:15: note: object ‘sht_foo’ of size 2
  392 |         short sht_foo=(short)strtol(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10);
      |               ^~~~~~~
nco_flt.c:389:28: warning: array subscript ‘unsigned int[0]’ is partly outside array bounds of ‘short unsigned int[1]’ [-Warray-bounds=]
  389 |         u32_lst[u32_nbr++]=*ui32p;
      |                            ^~~~~~
nco_flt.c:386:24: note: object ‘usht_foo’ of size 2
  386 |         unsigned short usht_foo=(unsigned short)strtoul(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10);
      |                        ^~~~~~~~
nco_flt.c:330:37: warning: ‘%s’ directive argument is null [-Wformat-overflow=]
  330 |     (void)fprintf(stderr,"%s: ERROR %s reports supplied filter string is empty\n",nco_prg_nm_get(),flt_sng);
      |                                     ^~
nco_flt.c: In function ‘nco_qnt_mtd’:
nco_flt.c:1677:11: warning: ‘aed_ppc_alg.att_nm’ may be used uninitialized [-Wmaybe-uninitialized]
 1677 |     (void)nco_aed_prc(nc_id,var_cnt_id,aed_cnt_alg);
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_flt.c:1461:11: note: ‘aed_ppc_alg.att_nm’ was declared here
 1461 |   aed_sct aed_ppc_alg;
      |           ^~~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_fl_utl.lo nco_fl_utl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_fl_utl.c  -fPIC -DPIC -o .libs/nco_fl_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_fl_utl.c -o nco_fl_utl.o >/dev/null 2>&1
nco_fl_utl.c: In function ‘nco_fl_nm_prs’:
nco_fl_utl.c:1754:45: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=]
 1754 |         (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2);
      |                                             ^~
nco_fl_utl.c:1754:41: note: directive argument in the range [-2147483648, 2147483645]
 1754 |         (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2);
      |                                         ^~~~~~~~~~~~~
In file included from /usr/include/stdio.h:970,
                 from nco_fl_utl.h:26,
                 from nco_fl_utl.c:10:
In function ‘sprintf’,
    inlined from ‘nco_fl_nm_prs’ at nco_fl_utl.c:1754:8:
/usr/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 9 and 19 bytes into a destination of size 10
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:548,
                 from nco_fl_utl.h:28:
In function ‘strncpy’,
    inlined from ‘nco_fl_mk_lcl’ at nco_fl_utl.c:1445:13:
/usr/include/bits/string_fortified.h:100:10: warning: ‘__builtin_strncpy’ destination unchanged after copying no bytes [-Wstringop-truncation]
  100 |   return __builtin___strncpy_chk (__dest, __src, __len,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |                                   __glibc_objsize (__dest));
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~
nco_fl_utl.c: In function ‘nco_fl_ncz2psx’:
nco_fl_utl.c:2595:29: warning: ‘psx_fll_lcl’ may be used uninitialized [-Wmaybe-uninitialized]
 2595 |     if(psx_fll) psx_fll_lcl=(char *)strdup(psx_fll_lcl);
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_fl_utl.c:2518:11: note: ‘psx_fll_lcl’ was declared here
 2518 |     char *psx_fll_lcl; /* O [sng] Full POSIX path with filename, suitable for file stat() */
      |           ^~~~~~~~~~~
nco_fl_utl.c:2582:25: warning: ‘psx_drc_lcl’ may be used uninitialized [-Wmaybe-uninitialized]
 2582 |           psx_drc_lcl[1]='\0';
      |           ~~~~~~~~~~~~~~^~~~~
nco_fl_utl.c:2519:11: note: ‘psx_drc_lcl’ was declared here
 2519 |     char *psx_drc_lcl; /* O [sng] POSIX path only, no filename, suitable for directory stat() */
      |           ^~~~~~~~~~~
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nco_lst_utl.c: In function ‘nco_fmt_sng_printf_subst’:
nco_lst_utl.c:38:89: warning: unknown escape sequence: '\.'
   38 |   const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */
      |                                                                                         ^
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_omp.c  -fPIC -DPIC -o .libs/nco_omp.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_omp.c -o nco_omp.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_map.lo nco_map.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_map.c  -fPIC -DPIC -o .libs/nco_map.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_map.c -o nco_map.o >/dev/null 2>&1
nco_map.c: In function ‘nco_map_mk’:
nco_map.c:302:12: warning: variable ‘flg_grd_out_rct’ set but not used [-Wunused-but-set-variable]
  302 |   nco_bool flg_grd_out_rct=False; /* [flg] Rectangular coordinates */
      |            ^~~~~~~~~~~~~~~
nco_map.c:300:12: warning: variable ‘flg_grd_in_rct’ set but not used [-Wunused-but-set-variable]
  300 |   nco_bool flg_grd_in_rct=False; /* [flg] Rectangular coordinates */
      |            ^~~~~~~~~~~~~~
nco_map.c:231:7: warning: variable ‘bnd_nbr_out’ set but not used [-Wunused-but-set-variable]
  231 |   int bnd_nbr_out; /* [nbr] Number of vertices for destination grid coordinates */
      |       ^~~~~~~~~~~
nco_map.c:213:8: warning: variable ‘col_nbr_in’ set but not used [-Wunused-but-set-variable]
  213 |   long col_nbr_in; /* [idx] Number of columns in source grid */
      |        ^~~~~~~~~~
nco_map.c:212:7: warning: variable ‘bnd_nbr_in’ set but not used [-Wunused-but-set-variable]
  212 |   int bnd_nbr_in; /* [nbr] Number of vertices for source grid coordinates */
      |       ^~~~~~~~~~
nco_map.c: In function ‘nco_map_chk’:
nco_map.c:2169:10: warning: unused variable ‘idx_max’ [-Wunused-variable]
 2169 |   size_t idx_max;
      |          ^~~~~~~
nco_map.c: In function ‘nco_map_mk’:
nco_map.c:418:15: warning: ‘lon_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized]
  418 |         if(idx%lon_nbr_out == 0) idx_tst=idx;
      |            ~~~^~~~~~~~~~~~
nco_map.c:233:8: note: ‘lon_nbr_out’ was declared here
  233 |   long lon_nbr_out; /* [nbr] Number of longitudes in destination grid */
      |        ^~~~~~~~~~~
nco_map.c:402:15: warning: ‘lon_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized]
  402 |         if(idx%lon_nbr_in == 0) idx_tst=idx;
      |            ~~~^~~~~~~~~~~
nco_map.c:214:8: note: ‘lon_nbr_in’ was declared here
  214 |   long lon_nbr_in; /* [idx] Number of longitudes in source grid */
      |        ^~~~~~~~~~
nco_map.c: In function ‘nco_map_chk’:
nco_map.c:2365:30: warning: ‘ival_a’ may be used uninitialized [-Wmaybe-uninitialized]
 2365 |       if(has_mask_a && ival_a[idx_col] == 0){
      |                              ^
nco_map.c:2351:10: note: ‘ival_a’ was declared here
 2351 |     int *ival_a;
      |          ^~~~~~
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_pck.c  -fPIC -DPIC -o .libs/nco_pck.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_pck.c -o nco_pck.o >/dev/null 2>&1
nco_pck.c: In function ‘nco_pck_map_get’:
nco_pck.c:160:88: warning: ‘%s’ directive argument is null [-Wformat-overflow=]
  160 |     (void)fprintf(stderr,"%s: ERROR %s reports empty user-specified packing map string %s\n",nco_prg_nm,fnc_nm,nco_pck_map_sng);
      |                                                                                        ^~
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_ply.lo nco_ply.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply.c  -fPIC -DPIC -o .libs/nco_ply.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply.c -o nco_ply.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_netcdf.lo nco_netcdf.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_netcdf.c  -fPIC -DPIC -o .libs/nco_netcdf.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_netcdf.c -o nco_netcdf.o >/dev/null 2>&1
nco_netcdf.c: In function ‘nco_get_var’:
nco_netcdf.c:2617:9: warning: variable ‘rcd2’ set but not used [-Wunused-but-set-variable]
 2617 |     int rcd2;
      |         ^~~~
nco_netcdf.c: In function ‘nco_get_vara’:
nco_netcdf.c:2845:9: warning: variable ‘rcd2’ set but not used [-Wunused-but-set-variable]
 2845 |     int rcd2;
      |         ^~~~
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_ply_lst.lo nco_ply_lst.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply_lst.c  -fPIC -DPIC -o .libs/nco_ply_lst.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ply_lst.c -o nco_ply_lst.o >/dev/null 2>&1
nco_ply_lst.c: In function ‘nco_poly_lst_mk_vrl_crt’:
nco_ply_lst.c:608:10: warning: variable ‘size’ set but not used [-Wunused-but-set-variable]
  608 |   kd_box size;
      |          ^~~~
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rec_var.c  -fPIC -DPIC -o .libs/nco_rec_var.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rec_var.c -o nco_rec_var.o >/dev/null 2>&1
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ppc.c  -fPIC -DPIC -o .libs/nco_ppc.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_ppc.c -o nco_ppc.o >/dev/null 2>&1
nco_ppc.c: In function ‘nco_ppc_bitmask’:
nco_ppc.c:1198:53: warning: ‘mss_val_cmp_dbl’ may be used uninitialized [-Wmaybe-uninitialized]
 1198 |         if(op1.dp[idx] != 0.0 && op1.dp[idx] != 1.0 && op1.dp[idx] != mss_val_cmp_dbl){
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_ppc.c:666:10: note: ‘mss_val_cmp_dbl’ was declared here
  666 |   double mss_val_cmp_dbl; /* Missing value for comparison to double precision values */
      |          ^~~~~~~~~~~~~~~
nco_ppc.c:1027:55: warning: ‘mss_val_cmp_flt’ may be used uninitialized [-Wmaybe-uninitialized]
 1027 |         if(op1.fp[idx] != 0.0f && op1.fp[idx] != 1.0f && op1.fp[idx] != mss_val_cmp_flt){
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_ppc.c:668:9: note: ‘mss_val_cmp_flt’ was declared here
  668 |   float mss_val_cmp_flt; /* Missing value for comparison to single precision values */
      |         ^~~~~~~~~~~~~~~
nco_ppc.c:680:17: warning: ‘u32_ptr’ may be used uninitialized [-Wmaybe-uninitialized]
  680 |   unsigned int *u32_ptr;
      |                 ^~~~~~~
nco_ppc.c:684:27: warning: ‘u64_ptr’ may be used uninitialized [-Wmaybe-uninitialized]
  684 |   unsigned long long int *u64_ptr;
      |                           ^~~~~~~
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_flt.c  -fPIC -DPIC -o .libs/nco_rth_flt.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_flt.c -o nco_rth_flt.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_rth_utl.lo nco_rth_utl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_utl.c  -fPIC -DPIC -o .libs/nco_rth_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rth_utl.c -o nco_rth_utl.o >/dev/null 2>&1
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scl_utl.c  -fPIC -DPIC -o .libs/nco_scl_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scl_utl.c -o nco_scl_utl.o >/dev/null 2>&1
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_utl.c  -fPIC -DPIC -o .libs/nco_grp_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_grp_utl.c -o nco_grp_utl.o >/dev/null 2>&1
nco_grp_utl.c: In function ‘nco_chk_xtn’:
nco_grp_utl.c:2763:134: warning: ‘%s’ directive argument is null [-Wformat-overflow=]
 2763 |       if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of HDF-EOS5 standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_he5,att_xtn_val);
      |                                                                                                                                      ^~
nco_grp_utl.c:2780:132: warning: ‘%s’ directive argument is null [-Wformat-overflow=]
 2780 |       if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO %s value of netCDF standard global attribute \"%s\" is \"%s\"\n",nco_prg_nm_get(),fnc_nm,att_sng_nc,att_xtn_val);
      |                                                                                                                                    ^~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
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libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scm.c  -fPIC -DPIC -o .libs/nco_scm.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_scm.c -o nco_scm.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sld.c  -fPIC -DPIC -o .libs/nco_sld.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sld.c -o nco_sld.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sng_utl.c  -fPIC -DPIC -o .libs/nco_sng_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sng_utl.c -o nco_sng_utl.o >/dev/null 2>&1
nco_sng_utl.c: In function ‘nm2sng_cdl’:
nco_sng_utl.c:270:41: warning: ‘__builtin___snprintf_chk’ output truncated before the last format character [-Wformat-truncation=]
  270 |         snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr);
      |                                         ^
In file included from /usr/include/stdio.h:970,
                 from nco_sng_utl.h:21,
                 from nco_sng_utl.c:10:
In function ‘snprintf’,
    inlined from ‘nm2sng_cdl’ at nco_sng_utl.c:270:2:
/usr/include/bits/stdio2.h:68:10: note: ‘__builtin___snprintf_chk’ output 5 bytes into a destination of size 4
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
nco_sng_utl.c: In function ‘nm2sng_fl’:
nco_sng_utl.c:466:41: warning: ‘__builtin___snprintf_chk’ output truncated before the last format character [-Wformat-truncation=]
  466 |         snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr);
      |                                         ^
In function ‘snprintf’,
    inlined from ‘nm2sng_fl’ at nco_sng_utl.c:466:2:
/usr/include/bits/stdio2.h:68:10: note: ‘__builtin___snprintf_chk’ output 5 bytes into a destination of size 4
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_s1d.c  -fPIC -DPIC -o .libs/nco_s1d.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_s1d.c -o nco_s1d.o >/dev/null 2>&1
nco_s1d.c: In function ‘nco_s1d_unpack’:
nco_s1d.c:1422:45: warning: ‘fl_tpl’ may be used uninitialized [-Wmaybe-uninitialized]
 1422 |     if(FL_RTR_RMT_LCN && RM_RMT_FL_PST_PRC) (void)nco_fl_rm(fl_tpl);
      |                                             ^~~~~~~~~~~~~~~~~~~~~~~
nco_s1d.c:153:9: note: ‘fl_tpl’ was declared here
  153 |   char *fl_tpl; /* [sng] Template file (contains horizontal grid) */
      |         ^~~~~~
nco_s1d.c:1223:15: warning: ‘idx_in’ may be used uninitialized [-Wmaybe-uninitialized]
 1223 |             if(idx_in == var_sz_in){
      |               ^
nco_s1d.c:197:10: note: ‘idx_in’ was declared here
  197 |   size_t idx_in; /* [idx] Input grid index */
      |          ^~~~~~
nco_s1d.c:1176:23: warning: ‘has_clm’ may be used uninitialized [-Wmaybe-uninitialized]
 1176 |           if(need_mec && has_clm){
      |              ~~~~~~~~~^~~~~~~~~~
nco_s1d.c:444:12: note: ‘has_clm’ was declared here
  444 |   nco_bool has_clm; /* [flg] Variable contains column dimension */
      |            ^~~~~~~
In file included from /usr/include/stdio.h:970,
                 from nco_s1d.h:17,
                 from nco_s1d.c:10:
In function ‘fprintf’,
    inlined from ‘nco_s1d_unpack’ at nco_s1d.c:1265:46:
/usr/include/bits/stdio2.h:111:10: warning: ‘mrv_idx’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_s1d.c: In function ‘nco_s1d_unpack’:
nco_s1d.c:1090:8: note: ‘mrv_idx’ was declared here
 1090 |   long mrv_idx; /* [idx] MRV index */
      |        ^~~~~~~
nco_s1d.c:1705:67: warning: ‘lnd_typ_crr’ may be used uninitialized [-Wmaybe-uninitialized]
 1705 |         if(!flg_var_mpt && nco_dbg_lvl_get() >= nco_dbg_fl) (void)fprintf(fp_stdout,"%s: %s, idx_in = %ld, s1d_enm = %d = %s, lnd_typ_crr = %d = %s, has_mec = %d\n",nco_prg_nm_get(),var_nm,idx_in,(int)nco_s1d_typ,nco_s1d_sng(nco_s1d_typ),lnd_typ_crr,nco_lnd_typ_sng(lnd_typ_crr),has_mec);
      |                                                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_s1d.c:781:7: note: ‘lnd_typ_crr’ was declared here
  781 |   int lnd_typ_crr; /* [enm] Landunit type of current column|landunit|pft */
      |       ^~~~~~~~~~~
nco_s1d.c:1781:24: warning: ‘grd_idx_out’ may be used uninitialized [-Wmaybe-uninitialized]
 1781 |                 idx_out=grd_idx_out;
      |                 ~~~~~~~^~~~~~~~~~~~
nco_s1d.c:185:12: note: ‘grd_idx_out’ was declared here
  185 |   long int grd_idx_out;
      |            ^~~~~~~~~~~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_srm.lo nco_srm.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_srm.c  -fPIC -DPIC -o .libs/nco_srm.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_srm.c -o nco_srm.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sph.c  -fPIC -DPIC -o .libs/nco_sph.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_sph.c -o nco_sph.o >/dev/null 2>&1
nco_sph.c: In function ‘nco_sph_seg_int_old’:
nco_sph.c:508:10: warning: variable ‘nx_ci’ set but not used [-Wunused-but-set-variable]
  508 |   double nx_ci;
      |          ^~~~~
nco_sph.c:506:10: warning: variable ‘nx3’ set but not used [-Wunused-but-set-variable]
  506 |   double nx3;
      |          ^~~
nco_sph.c:505:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable]
  505 |   double nx2;
      |          ^~~
nco_sph.c: In function ‘nco_sph_seg_parallel’:
nco_sph.c:1426:10: warning: variable ‘nx3’ set but not used [-Wunused-but-set-variable]
 1426 |   double nx3;
      |          ^~~
nco_sph.c:1425:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable]
 1425 |   double nx2;
      |          ^~~
nco_sph.c:1424:10: warning: variable ‘nx1’ set but not used [-Wunused-but-set-variable]
 1424 |   double nx1;
      |          ^~~
nco_sph.c: In function ‘nco_sph_seg_vrt_int’:
nco_sph.c:1839:10: warning: variable ‘nx_av’ set but not used [-Wunused-but-set-variable]
 1839 |   double nx_av;
      |          ^~~~~
nco_sph.c:1838:10: warning: variable ‘nx_ab’ set but not used [-Wunused-but-set-variable]
 1838 |   double nx_ab;
      |          ^~~~~
nco_sph.c: In function ‘nco_sph_is_convex’:
nco_sph.c:2472:8: warning: variable ‘n1’ set but not used [-Wunused-but-set-variable]
 2472 | double n1;
      |        ^~
nco_sph.c: In function ‘nco_rll_intersect’:
nco_sph.c:3305:10: warning: variable ‘nx2’ set but not used [-Wunused-but-set-variable]
 3305 |   double nx2;
      |          ^~~
nco_sph.c:3304:10: warning: variable ‘nx1’ set but not used [-Wunused-but-set-variable]
 3304 |   double nx1;
      |          ^~~
In file included from /usr/include/stdio.h:970,
                 from nco_sph.h:61,
                 from nco_sph.c:49:
In function ‘fprintf’,
    inlined from ‘nco_sph_seg_int_old’ at nco_sph.c:584:5:
/usr/include/bits/stdio2.h:111:10: warning: ‘nx_ai’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_sph.c: In function ‘nco_sph_seg_int_old’:
nco_sph.c:507:10: note: ‘nx_ai’ was declared here
  507 |   double nx_ai;
      |          ^~~~~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_prn.lo nco_prn.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_prn.c  -fPIC -DPIC -o .libs/nco_prn.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_prn.c -o nco_prn.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
nco_prn.c: In function ‘nco_prn_var_val_lmt’:
nco_prn.c:1649:53: warning: ‘%s’ directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=]
 1649 |           (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng);
      |                                                     ^~                               ~~~~~~~
In file included from /usr/include/stdio.h:970,
                 from nco_prn.h:22,
                 from nco_prn.c:10:
In function ‘sprintf’,
    inlined from ‘nco_prn_var_val_lmt’ at nco_prn.c:1649:10:
/usr/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 19 and 118 bytes into a destination of size 100
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
nco_prn.c: In function ‘nco_prn_var_dfn’:
nco_prn.c:1884:36: warning: ‘vln_lng_avg’ may be used uninitialized [-Wmaybe-uninitialized]
 1884 |       if(cls_typ == NC_VLEN) (void)fprintf(fp_out,"%*s%s size (RAM) = %ld*mean_length(NC_VLEN)*sizeof(%s) = %ld*%g*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,var_sz,nco_typ_sng(bs_typ),var_sz,vln_lng_avg,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); else (void)fprintf(fp_out,"%*s%s size (RAM) = %ld*sizeof(%s) = %ld*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,var_sz,nco_typ_sng(cls_typ),var_sz,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr);
      |                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_prn.c:1726:9: note: ‘vln_lng_avg’ was declared here
 1726 |   float vln_lng_avg; /* [nbr] Mean vlen length */
      |         ^~~~~~~~~~~
nco_prn.c: In function ‘nco_prn_att’:
nco_prn.c:807:15: warning: ‘mbr_val’ may be used uninitialized [-Wmaybe-uninitialized]
  807 |           rcd=nco_inq_enum_ident(grp_id,att[idx].type,mbr_val,mbr_nm);
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_prn.c:478:15: note: ‘mbr_val’ was declared here
  478 |     long long mbr_val;
      |               ^~~~~~~
nco_prn.c: In function ‘nco_prn_var_val_trv’:
nco_prn.c:2391:13: warning: ‘vln_val_dp’ may be used uninitialized [-Wmaybe-uninitialized]
 2391 |     double *vln_val_dp;
      |             ^~~~~~~~~~
nco_prn.c:2531:29: warning: ‘vln_val_fp’ may be used uninitialized [-Wmaybe-uninitialized]
 2531 |                 is_mss_val=!memcmp((char *)vln_val_fp+vln_idx*val_sz_byt,var->mss_val.vp,(size_t)val_sz_byt);
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_prn.c:2392:12: note: ‘vln_val_fp’ was declared here
 2392 |     float *vln_val_fp;
      |            ^~~~~~~~~~
nco_prn.c:2564:78: warning: ‘vln_val_ip’ may be used uninitialized [-Wmaybe-uninitialized]
 2564 |               if(prn_flg->PRN_MSS_VAL_BLANK && var->has_mss_val) is_mss_val=!memcmp((char *)vln_val_ip+vln_idx*val_sz_byt,var->mss_val.vp,(size_t)val_sz_byt);
      |                                                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_prn.c:2393:14: note: ‘vln_val_ip’ was declared here
 2393 |     nco_int *vln_val_ip;
      |              ^~~~~~~~~~
nco_prn.c:2394:16: warning: ‘vln_val_sp’ may be used uninitialized [-Wmaybe-uninitialized]
 2394 |     nco_short *vln_val_sp;
      |                ^~~~~~~~~~
nco_prn.c:2395:15: warning: ‘vln_val_bp’ may be used uninitialized [-Wmaybe-uninitialized]
 2395 |     nco_byte *vln_val_bp;
      |               ^~~~~~~~~~
nco_prn.c:2396:16: warning: ‘vln_val_ubp’ may be used uninitialized [-Wmaybe-uninitialized]
 2396 |     nco_ubyte *vln_val_ubp;
      |                ^~~~~~~~~~~
nco_prn.c:2397:17: warning: ‘vln_val_usp’ may be used uninitialized [-Wmaybe-uninitialized]
 2397 |     nco_ushort *vln_val_usp;
      |                 ^~~~~~~~~~~
nco_prn.c:2398:15: warning: ‘vln_val_uip’ may be used uninitialized [-Wmaybe-uninitialized]
 2398 |     nco_uint *vln_val_uip;
      |               ^~~~~~~~~~~
nco_prn.c:2399:16: warning: ‘vln_val_i64p’ may be used uninitialized [-Wmaybe-uninitialized]
 2399 |     nco_int64 *vln_val_i64p;
      |                ^~~~~~~~~~~~
nco_prn.c:2400:17: warning: ‘vln_val_ui64p’ may be used uninitialized [-Wmaybe-uninitialized]
 2400 |     nco_uint64 *vln_val_ui64p;
      |                 ^~~~~~~~~~~~~
nco_prn.c:2577:48: warning: ‘vln_lng’ may be used uninitialized [-Wmaybe-uninitialized]
 2577 |           case NC_UINT64: for(vln_idx=0;vln_idx<vln_lng;vln_idx++) (void)fprintf(fp_out,fmt_sng,vln_val_ui64p[vln_idx],(vln_idx != vln_lngm1) ? spr_sng : ""); break;
      |                                         ~~~~~~~^~~~~~~~
nco_prn.c:2403:12: note: ‘vln_lng’ was declared here
 2403 |     size_t vln_lng;
      |            ^~~~~~~
nco_prn.c:2577:74: warning: ‘vln_lngm1’ may be used uninitialized [-Wmaybe-uninitialized]
 2577 |           case NC_UINT64: for(vln_idx=0;vln_idx<vln_lng;vln_idx++) (void)fprintf(fp_out,fmt_sng,vln_val_ui64p[vln_idx],(vln_idx != vln_lngm1) ? spr_sng : ""); break;
      |                                                                          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_prn.c:2404:12: note: ‘vln_lngm1’ was declared here
 2404 |     size_t vln_lngm1;
      |            ^~~~~~~~~
nco_prn.c:2599:11: warning: ‘mbr_val’ may be used uninitialized [-Wmaybe-uninitialized]
 2599 |           nco_inq_enum_ident(nc_id,var->type,mbr_val,mbr_nm);
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_prn.c:2389:15: note: ‘mbr_val’ was declared here
 2389 |     long long mbr_val;
      |               ^~~~~~~
In function ‘sprintf’,
    inlined from ‘nco_prn_var_val_trv’ at nco_prn.c:2492:58:
/usr/include/bits/stdio2.h:30:10: warning: ‘sng_val_sng_cpy’ may be used uninitialized [-Wmaybe-uninitialized]
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
nco_prn.c: In function ‘nco_prn_var_val_trv’:
nco_prn.c:2039:9: note: ‘sng_val_sng_cpy’ was declared here
 2039 |   char *sng_val_sng_cpy; /* [sng] Copy of sng_val_sng to avoid cppcheck error about using sng_val_sng as both parameter and desitnation in sprintf(). NB: free() only one of these two pointers. */
      |         ^~~~~~~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_var_lst.lo nco_var_lst.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_lst.c  -fPIC -DPIC -o .libs/nco_var_lst.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_lst.c -o nco_var_lst.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_var_avg.lo nco_var_avg.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_avg.c  -fPIC -DPIC -o .libs/nco_var_avg.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_avg.c -o nco_var_avg.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_scv.c  -fPIC -DPIC -o .libs/nco_var_scv.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_scv.c -o nco_var_scv.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_utl.c  -fPIC -DPIC -o .libs/nco_var_utl.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_utl.c -o nco_var_utl.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
ncecat.c: In function ‘main’:
ncecat.c:843:17: warning: ‘__builtin_strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation]
  843 |         gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng);
      |                 ^
ncecat.c:843:45: note: length computed here
  843 |         gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng);
      |                                             ^~~~~~~~~~~~~~~~~~~
ncecat.c:801:30: warning: ‘%02d’ directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=]
  801 |         sprintf(grp_out_sfx,"%02d",fl_idx);
      |                              ^~~~
ncecat.c:801:29: note: directive argument in the range [0, 2147483646]
  801 |         sprintf(grp_out_sfx,"%02d",fl_idx);
      |                             ^~~~~~
In file included from /usr/include/stdio.h:970,
                 from ncecat.c:46:
In function ‘sprintf’,
    inlined from ‘main’ at ncecat.c:801:9:
/usr/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 3 and 11 bytes into a destination of size 3
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_var_rth.lo nco_var_rth.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_rth.c  -fPIC -DPIC -o .libs/nco_var_rth.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_var_rth.c -o nco_var_rth.o >/dev/null 2>&1
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
nco_var_rth.c: In function ‘nco_var_sbt’:
nco_var_rth.c:3726:25: warning: ‘tm_srt’ may be used uninitialized [-Wmaybe-uninitialized]
 3726 |     tm_drn=1.0e6*(tm_end-tm_srt)/CLOCKS_PER_SEC;
      |                  ~~~~~~~^~~~~~~~
nco_var_rth.c:3539:11: note: ‘tm_srt’ was declared here
 3539 |   clock_t tm_srt;
      |           ^~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncks.o ncks.c
ncks.c: In function ‘main’:
ncks.c:1638:7: warning: ‘fl_lst_in’ may be used uninitialized [-Wmaybe-uninitialized]
 1638 |     if(fl_lst_in && fl_lst_abb == NULL) fl_lst_in=nco_sng_lst_free(fl_lst_in,fl_nbr);
      |       ^
ncks.c:124:10: note: ‘fl_lst_in’ was declared here
  124 |   char **fl_lst_in;
      |          ^~~~~~~~~
ncks.c:200:8: warning: ‘in_id_arr’ may be used uninitialized [-Wmaybe-uninitialized]
  200 |   int *in_id_arr; /* [id] netCDF file IDs used by OpenMP code */
      |        ^~~~~~~~~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex  -Pnco_yy
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c
ncap_lex.c:2978:16: warning: ‘input’ defined but not used [-Wunused-function]
 2978 | #else
      |                ^    
ncap_lex.l: In function ‘nco_yylex’:
ncap_lex.l:611:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=]
  611 |       (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in);
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~        ~~~~~~
In file included from /usr/include/stdio.h:970,
                 from ncap_lex.c:277:
In function ‘sprintf’,
    inlined from ‘nco_yylex’ at ncap_lex.l:611:13:
/usr/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 98 or more bytes (assuming 353) into a destination of size 200
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
ncap_lex.l: In function ‘nco_yylex’:
ncap_lex.l:587:36: warning: ‘%s’ directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=]
  587 |         (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in);
      |                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~        ~~~~~~
In function ‘sprintf’,
    inlined from ‘nco_yylex’ at ncap_lex.l:587:8:
/usr/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 98 or more bytes (assuming 353) into a destination of size 200
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
ncap_lex.l: In function ‘nco_yylex’:
ncap_lex.l:634:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=]
  634 |       (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext);
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~
In function ‘sprintf’,
    inlined from ‘nco_yylex’ at ncap_lex.l:634:13:
/usr/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output 66 or more bytes (assuming 321) into a destination of size 200
   30 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   31 |                                   __glibc_objsize (__s), __fmt,
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   32 |                                   __va_arg_pack ());
      |                                   ~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o ncra.o ncra.c
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -c -o nco_rgr.lo nco_rgr.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rgr.c  -fPIC -DPIC -o .libs/nco_rgr.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fopenmp -std=gnu11 -c nco_rgr.c -o nco_rgr.o >/dev/null 2>&1
nco_rgr.c: In function ‘nco_ntp_vrt._omp_fn.0’:
nco_rgr.c:3470:19: warning: ‘crd_out_mnt’ may be used uninitialized [-Wmaybe-uninitialized]
 3470 |           double *crd_out_mnt; /* Output vertical coordinate reversed if necessary to be monotonically increasing */
      |                   ^~~~~~~~~~~
nco_rgr.c:3469:19: warning: ‘crd_in_mnt’ may be used uninitialized [-Wmaybe-uninitialized]
 3469 |           double *crd_in_mnt; /* Input vertical coordinate reversed if necessary to be monotonically increasing */
      |                   ^~~~~~~~~~
nco_rgr.c:3471:19: warning: ‘dat_in_mnt’ may be used uninitialized [-Wmaybe-uninitialized]
 3471 |           double *dat_in_mnt; /* Input data (to be interpolated) reversed if necessary along with input grid */
      |                   ^~~~~~~~~~
nco_rgr.c:3472:19: warning: ‘dat_out_mnt’ may be used uninitialized [-Wmaybe-uninitialized]
 3472 |           double *dat_out_mnt; /* Output data (interpolated) reversed if necessary along with output grid */
      |                   ^~~~~~~~~~~
nco_rgr.c:3729:23: warning: ‘FIRST_WARNING_RHS’ may be used uninitialized [-Wmaybe-uninitialized]
 3729 |                     if(FIRST_WARNING_RHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated toward/into surface using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm);
      |                       ^
nco_rgr.c:3536:20: note: ‘FIRST_WARNING_RHS’ was declared here
 3536 |           nco_bool FIRST_WARNING_RHS; /* [flg] First warning for RHS extrapolation */
      |                    ^~~~~~~~~~~~~~~~~
nco_rgr.c:3651:23: warning: ‘FIRST_WARNING_LHS’ may be used uninitialized [-Wmaybe-uninitialized]
 3651 |                     if(FIRST_WARNING_LHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated upward towards space using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm);
      |                       ^
nco_rgr.c:3535:20: note: ‘FIRST_WARNING_LHS’ was declared here
 3535 |           nco_bool FIRST_WARNING_LHS; /* [flg] First warning for LHS extrapolation */
      |                    ^~~~~~~~~~~~~~~~~
nco_rgr.c: In function ‘nco_rgr_ini’:
nco_rgr.c:556:9: warning: ‘cnv_nbr’ may be used uninitialized [-Wmaybe-uninitialized]
  556 |       if(cnv_nbr != 4) cnv_nbr=sscanf(rgr_lst[rgr_var_idx].val,"%lf,%lf,%lf,%lf",&rgr->lon_wst,&rgr->lon_est,&rgr->lat_sth,&rgr->lat_nrt);
      |         ^
nco_rgr.c:268:7: note: ‘cnv_nbr’ was declared here
  268 |   int cnv_nbr; /* [nbr] Number of elements converted by sscanf() */
      |       ^~~~~~~
nco_rgr.c: In function ‘nco_lat_wgt_gss’:
nco_rgr.c:7335:13: warning: ‘sp’ may be used uninitialized [-Wmaybe-uninitialized]
 7335 |       (void)fprintf(stdout,"%s: ERROR %s reports convergence only %g after %d iterations for lat_idx = %d\n",nco_prg_nm_get(),fnc_nm,fabs(sp),itr_nbr_max,lat_idx);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_rgr.c:7300:10: note: ‘sp’ was declared here
 7300 |   double sp; // Current iteration latitude increment
      |          ^~
nco_rgr.c: In function ‘nco_sph_plg_area’:
nco_rgr.c:8084:5: warning: ‘c_idx’ may be used uninitialized [-Wmaybe-uninitialized]
 8084 |   if(c_idx) c_idx=(long *)nco_free(c_idx);
      |     ^
nco_rgr.c:7544:9: note: ‘c_idx’ was declared here
 7544 |   long *c_idx; /* [idx] Point C 1-D indices for each triangle in polygon */
      |         ^~~~~
nco_rgr.c:8083:5: warning: ‘b_idx’ may be used uninitialized [-Wmaybe-uninitialized]
 8083 |   if(b_idx) b_idx=(long *)nco_free(b_idx);
      |     ^
nco_rgr.c:7543:9: note: ‘b_idx’ was declared here
 7543 |   long *b_idx; /* [idx] Point B 1-D indices for each triangle in polygon */
      |         ^~~~~
nco_rgr.c:8082:5: warning: ‘a_idx’ may be used uninitialized [-Wmaybe-uninitialized]
 8082 |   if(a_idx) a_idx=(long *)nco_free(a_idx);
      |     ^
nco_rgr.c:7542:9: note: ‘a_idx’ was declared here
 7542 |   long *a_idx; /* [idx] Point A 1-D indices for each triangle in polygon */
      |         ^~~~~
nco_rgr.c: In function ‘nco_rgr_wgt’:
nco_rgr.c:4161:113: warning: ‘%s’ directive argument is null [-Wformat-overflow=]
 4161 |   if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val);
      |                                                                                                                 ^~
nco_rgr.c:4392:29: warning: ‘lon_psn_src’ may be used uninitialized [-Wmaybe-uninitialized]
 4392 |     lon_nbr_in=dmn_sz_in_int[lon_psn_src];
      |                             ^
nco_rgr.c:4289:7: note: ‘lon_psn_src’ was declared here
 4289 |   int lon_psn_src; /* [idx] Ordinal position of longitude in rectangular source grid dimension-size array */
      |       ^~~~~~~~~~~
nco_rgr.c:4393:29: warning: ‘lat_psn_src’ may be used uninitialized [-Wmaybe-uninitialized]
 4393 |     lat_nbr_in=dmn_sz_in_int[lat_psn_src];
      |                             ^
nco_rgr.c:4290:7: note: ‘lat_psn_src’ was declared here
 4290 |   int lat_psn_src; /* [idx] Ordinal position of latitude  in rectangular source grid dimension-size array */
      |       ^~~~~~~~~~~
In file included from /usr/include/stdio.h:970,
                 from nco_rgr.h:19,
                 from nco_rgr.c:10:
In function ‘fprintf’,
    inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4474:11:
/usr/include/bits/stdio2.h:111:10: warning: ‘col_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_rgr.c: In function ‘nco_rgr_wgt’:
nco_rgr.c:4381:8: note: ‘col_nbr_in’ was declared here
 4381 |   long col_nbr_in; /* [idx] Number of columns in source grid */
      |        ^~~~~~~~~~
In function ‘fprintf’,
    inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4474:11:
/usr/include/bits/stdio2.h:111:10: warning: ‘lon_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_rgr.c: In function ‘nco_rgr_wgt’:
nco_rgr.c:4382:8: note: ‘lon_nbr_in’ was declared here
 4382 |   long lon_nbr_in; /* [idx] Number of longitudes in rectangular source grid */
      |        ^~~~~~~~~~
In function ‘fprintf’,
    inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4474:11:
/usr/include/bits/stdio2.h:111:10: warning: ‘lat_nbr_in’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |                         ~~~~~~~~~~~~~~~~~
nco_rgr.c: In function ‘nco_rgr_wgt’:
nco_rgr.c:4383:8: note: ‘lat_nbr_in’ was declared here
 4383 |   long lat_nbr_in; /* [idx] Number of latitudes  in rectangular source grid */
      |        ^~~~~~~~~~
In function ‘fprintf’,
    inlined from ‘nco_rgr_wgt’ at nco_rgr.c:4885:47:
/usr/include/bits/stdio2.h:111:10: warning: ‘idx_max_dvn’ may be used uninitialized [-Wmaybe-uninitialized]
  111 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                         __va_arg_pack ());
      |             make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
            ~~~~~~~~~~~~~~~~~
nco_rgr.c: In function ‘nco_rgr_wgt’:
nco_rgr.c:4865:8: note: ‘idx_max_dvn’ was declared here
 4865 |   long idx_max_dvn; /* [idx] Index of maximum deviation from 1.0 */
      |        ^~~~~~~~~~~
nco_rgr.c:5685:9: warning: ‘bnd_nm_out’ may be used uninitialized [-Wmaybe-uninitialized]
 5685 |     if(!strcmp(bnd_nm_out,bnd_tm_nm_out)){
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_rgr.c:5615:9: note: ‘bnd_nm_out’ was declared here
 5615 |   char *bnd_nm_out;
      |         ^~~~~~~~~~
nco_rgr.c:7143:32: warning: ‘tm_srt’ may be used uninitialized [-Wmaybe-uninitialized]
 7143 |           tm_drn=(float)(tm_end-tm_srt)/CLOCKS_PER_SEC;
      |                         ~~~~~~~^~~~~~~~
nco_rgr.c:6717:17: note: ‘tm_srt’ was declared here
 6717 |         clock_t tm_srt; /* [us] Microseconds at start */
      |                 ^~~~~~
nco_rgr.c: In function ‘nco_grd_nfr’:
nco_rgr.c:10977:7: warning: ‘lat_typ’ may be used uninitialized [-Wmaybe-uninitialized]
10977 |     if(lat_typ == nco_grd_lat_nil){
      |       ^
nco_rgr.c:9560:23: note: ‘lat_typ’ was declared here
 9560 |   nco_grd_lat_typ_enm lat_typ; /* [enm] Latitude grid-type enum */
      |                       ^~~~~~~
nco_rgr.c:10148:11: warning: ‘msk_unn.vp’ may be used uninitialized [-Wmaybe-uninitialized]
10148 |       rcd=nco_get_vara(in_id,msk_id,dmn_srt,dmn_cnt,msk_unn.vp,msk_typ);
      |           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_rgr.c:9566:11: note: ‘msk_unn.vp’ was declared here
 9566 |   ptr_unn msk_unn;
      |           ^~~~~~~
nco_rgr.c:10964:51: warning: ‘lat_spn’ may be used uninitialized [-Wmaybe-uninitialized]
10964 |     if(flg_s2n) lat_ctr_tst_fv=lat_ntf[0L]+lat_spn/(lat_nbr-1L); else lat_ctr_tst_fv=lat_ntf[0L]-lat_spn/(lat_nbr-1L);
      |                                            ~~~~~~~^~~~~~~~~~~~~
nco_rgr.c:9457:10: note: ‘lat_spn’ was declared here
 9457 |   double lat_spn; /* [dgr] Latitude span */
      |          ^~~~~~~
nco_rgr.c: In function ‘nco_ntp_vrt’:
nco_rgr.c:1137:9: warning: ‘ps_nm_tpl’ may be used uninitialized [-Wmaybe-uninitialized]
 1137 |     rcd=nco_inq_varid_flg(tpl_id,ps_nm_tpl,&ps_id);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
nco_rgr.c:1103:9: note: ‘ps_nm_tpl’ was declared here
 1103 |   char *ps_nm_tpl; /* [sng] Surface pressure field name in template file */
      |         ^~~~~~~~~
nco_rgr.c:1439:15: warning: ‘mss_val_cmp_dbl’ may be used uninitialized [-Wmaybe-uninitialized]
 1439 |             if(lt_out[idx_ttl] != mss_val_cmp_dbl) lt_sum[idx_fst+grd_idx]+=lt_out[idx_ttl];
      |               ^
nco_rgr.c:1341:10: note: ‘mss_val_cmp_dbl’ was declared here
 1341 |   double mss_val_cmp_dbl; /* Missing value for comparison to double precision values */
      |          ^~~~~~~~~~~~~~~
nco_rgr.c:2632:26: warning: ‘dmn_nbr_out’ may be used uninitialized [-Wmaybe-uninitialized]
 2632 |     for(dmn_idx=0;dmn_idx<dmn_nbr_out;dmn_idx++){
      |                   ~~~~~~~^~~~~~~~~~~~
nco_rgr.c:1166:7: note: ‘dmn_nbr_out’ was declared here
 1166 |   int dmn_nbr_out; /* [nbr] Number of dimensions in output file */
      |       ^~~~~~~~~~~
nco_rgr.c:2499:72: warning: ‘lev_in_min’ may be used uninitialized [-Wmaybe-uninitialized]
 2499 |       for(size_t idx_in=0;idx_in<tm_hrz_sz;idx_in++) prs_min_in[idx_in]=lev_in_min;
      |                                                      ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
nco_rgr.c:2495:14: note: ‘lev_in_min’ was declared here
 2495 |       double lev_in_min;
      |              ^~~~~~~~~~
nco_rgr.c:2507:77: warning: ‘lev_out_min’ may be used uninitialized [-Wmaybe-uninitialized]
 2507 |       for(size_t idx_out=0;idx_out<tm_hrz_sz;idx_out++) prs_min_out[idx_out]=lev_out_min;
      |                                                         ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
nco_rgr.c:2503:14: note: ‘lev_out_min’ was declared here
 2503 |       double lev_out_min;
      |              ^~~~~~~~~~~
nco_rgr.c:2561:72: warning: ‘lev_in_min’ may be used uninitialized [-Wmaybe-uninitialized]
 2561 |       for(size_t idx_in=0;idx_in<tm_hrz_sz;idx_in++) prs_min_in[idx_in]=lev_in_min;
      |                                                      ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
nco_rgr.c:2557:14: note: ‘lev_in_min’ was declared here
 2557 |       double lev_in_min;
      |              ^~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -fopenmp -std=gnu11 -release 5.2.7 -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o libnco.la -rpath /usr/lib64   nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_crt.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_flt.lo nco_grp_utl.lo nco_grp_trv.lo nco_kd.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ply.lo nco_ply_lst.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_s1d.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_sph.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo  -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/riscv64-redhat-linux/14/crti.o /usr/lib/gcc/riscv64-redhat-linux/14/crtbeginS.o  .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_crt.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_flt.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_kd.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_map.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ply.o .libs/nco_ply_lst.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_s1d.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_sph.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o   -L/usr/lib64 -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -L/usr/lib/gcc/riscv64-redhat-linux/14 -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/riscv64-redhat-linux/14/crtendS.o /usr/lib/gcc/riscv64-redhat-linux/14/crtn.o -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -grecord-gcc-switches -fstack-protector-strong -mno-omit-leaf-frame-pointer -fopenmp -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -Wl,--build-id=sha1   -fopenmp -Wl,-soname -Wl,libnco-5.2.7.so -o .libs/libnco-5.2.7.so
libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-5.2.7.so" "libnco.so")
libtool: link: ar cru .libs/libnco.a  nco_att_utl.o nco_aux.o nco_bnr.o nco_cln_utl.o nco_cnf_dmn.o nco_cnf_typ.o nco_cnk.o nco_cnv_arm.o nco_cnv_csm.o nco_crt.o nco_ctl.o nco_dbg.o nco_dmn_utl.o nco_fl_utl.o nco_flt.o nco_grp_utl.o nco_grp_trv.o nco_kd.o nco_lmt.o nco_lst_utl.o nco_map.o nco_md5.o nco_mmr.o nco_msa.o nco_mss_val.o nco_mta.o nco_netcdf.o nco_omp.o nco_pck.o nco_ply.o nco_ply_lst.o nco_ppc.o nco_prn.o nco_rec_var.o nco_rgr.o nco_rth_flt.o nco_rth_utl.o nco_scl_utl.o nco_s1d.o nco_scm.o nco_sld.o nco_sng_utl.o nco_sph.o nco_srm.o nco_var_avg.o nco_var_lst.o nco_var_rth.o nco_var_scv.o nco_var_utl.o
libtool: link: ranlib .libs/libnco.a
libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" )
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
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In file included from libnco++.hh:26,
                 from Invoke.cc:13:
fmc_gsl_cls.hh:49:11: warning: "NCO_GSL_VERSION" redefined
   49 | #  define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
      |           ^~~~~~~~~~~~~~~
In file included from fmc_gsl_cls.hh:12:
../../config.h:443:9: note: this is the location of the previous definition
  443 | #define NCO_GSL_VERSION 207
      |         ^~~~~~~~~~~~~~~
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make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o ncap2.o ncap2.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
In file included from libnco++.hh:26,
                 from ncap2.cc:80:
fmc_gsl_cls.hh:49:11: warning: "NCO_GSL_VERSION" redefined
   49 | #  define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
      |           ^~~~~~~~~~~~~~~
In file included from fmc_gsl_cls.hh:12:
../../config.h:443:9: note: this is the location of the previous definition
  443 | #define NCO_GSL_VERSION 207
      |         ^~~~~~~~~~~~~~~
ncap2.cc: In function ‘int main(int, char**)’:
ncap2.cc:175:7: warning: variable ‘antlr_ret’ set but not used [-Wunused-but-set-variable]
  175 |   int antlr_ret=EXIT_SUCCESS; /* exit return code from script */
      |       ^~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o fmc_cls.o fmc_cls.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o prs_cls.o prs_cls.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o NcapVar.o NcapVar.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o NcapVarVector.o NcapVarVector.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o ncoLexer.o ncoLexer.cpp
ncoLexer.cpp: In member function ‘void ncoLexer::mASSIGN(bool)’:
ncoLexer.cpp:416:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  416 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mPLUS_ASSIGN(bool)’:
ncoLexer.cpp:430:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  430 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mMINUS_ASSIGN(bool)’:
ncoLexer.cpp:444:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  444 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mTIMES_ASSIGN(bool)’:
ncoLexer.cpp:458:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  458 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mDIVIDE_ASSIGN(bool)’:
ncoLexer.cpp:472:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  472 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mINC(bool)’:
ncoLexer.cpp:486:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  486 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mDEC(bool)’:
ncoLexer.cpp:500:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  500 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mQUESTION(bool)’:
ncoLexer.cpp:514:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  514 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLPAREN(bool)’:
ncoLexer.cpp:528:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  528 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mRPAREN(bool)’:
ncoLexer.cpp:542:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  542 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLCURL(bool)’:
ncoLexer.cpp:556:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  556 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mRCURL(bool)’:
ncoLexer.cpp:570:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  570 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLSQUARE(bool)’:
ncoLexer.cpp:584:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  584 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mRSQUARE(bool)’:
ncoLexer.cpp:598:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  598 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mCOMMA(bool)’:
ncoLexer.cpp:612:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  612 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mQUOTE(bool)’:
ncoLexer.cpp:626:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  626 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mSEMI(bool)’:
ncoLexer.cpp:640:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  640 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mCOLON(bool)’:
ncoLexer.cpp:654:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  654 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mCARET(bool)’:
ncoLexer.cpp:668:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  668 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mTIMES(bool)’:
ncoLexer.cpp:682:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  682 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mDIVIDE(bool)’:
ncoLexer.cpp:696:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  696 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mMOD(bool)’:
ncoLexer.cpp:710:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  710 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mPLUS(bool)’:
ncoLexer.cpp:724:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  724 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mMINUS(bool)’:
ncoLexer.cpp:738:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  738 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mEQ(bool)’:
ncoLexer.cpp:752:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  752 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mNEQ(bool)’:
ncoLexer.cpp:766:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  766 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLTHAN(bool)’:
ncoLexer.cpp:780:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-setmake[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
-variable]
  780 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mGTHAN(bool)’:
ncoLexer.cpp:794:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  794 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLEQ(bool)’:
ncoLexer.cpp:808:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  808 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mGEQ(bool)’:
ncoLexer.cpp:822:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  822 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mFLTHAN(bool)’:
ncoLexer.cpp:836:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  836 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mFGTHAN(bool)’:
ncoLexer.cpp:850:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  850 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLAND(bool)’:
ncoLexer.cpp:864:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  864 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLNOT(bool)’:
ncoLexer.cpp:878:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  878 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLOR(bool)’:
ncoLexer.cpp:892:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  892 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mDOT(bool)’:
ncoLexer.cpp:906:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  906 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mCALL_REF(bool)’:
ncoLexer.cpp:920:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  920 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mDGT(bool)’:
ncoLexer.cpp:934:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  934 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLPH(bool)’:
ncoLexer.cpp:950:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
  950 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mLPHDGT(bool)’:
ncoLexer.cpp:1036:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1036 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mXPN(bool)’:
ncoLexer.cpp:1136:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1136 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mVAR_NM_QT(bool)’:
ncoLexer.cpp:1212:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1212 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mBLASTOUT(bool)’:
ncoLexer.cpp:1340:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1340 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mUNUSED_OPS(bool)’:
ncoLexer.cpp:1370:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1370 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mWS(bool)’:
ncoLexer.cpp:1422:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1422 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mCXX_COMMENT(bool)’:
ncoLexer.cpp:1472:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1472 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mC_COMMENT(bool)’:
ncoLexer.cpp:1502:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1502 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mNUMBER_DOT(bool)’:
ncoLexer.cpp:1560:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1560 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mNUMBER(bool)’:
ncoLexer.cpp:1684:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 1684 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mVAR_ATT(bool)’:
ncoLexer.cpp:2036:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 2036 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mATT_ID(bool)’:
ncoLexer.cpp:2318:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 2318 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
ncoLexer.cpp: In member function ‘void ncoLexer::mINCLUDE(bool)’:
ncoLexer.cpp:2689:51: warning: variable ‘_saveIndex’ set but not used [-Wunused-but-set-variable]
 2689 |         ANTLR_USE_NAMESPACE(std)string::size_type _saveIndex;
      |                                                   ^~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o ncap2_utl.o ncap2_utl.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o fmc_gsl_cls.o fmc_gsl_cls.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
In file included from fmc_gsl_cls.cc:10:
fmc_gsl_cls.hh:49:11: warning: "NCO_GSL_VERSION" redefined
   49 | #  define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
      |           ^~~~~~~~~~~~~~~
In file included from ncap2_att.hh:5,
                 from ncap2_utl.hh:60,
                 from ncoGrammar.g:31,
                 from fmc_gsl_cls.hh:43:
../../config.h:443:9: note: this is the location of the previous definition
  443 | #define NCO_GSL_VERSION 207
      |         ^~~~~~~~~~~~~~~
In file included from nco_gsl.hh:31,
                 from fmc_gsl_cls.cc:11:
../../config.h:443:9: warning: "NCO_GSL_VERSION" redefined
  443 | #define NCO_GSL_VERSION 207
      |         ^~~~~~~~~~~~~~~
fmc_gsl_cls.hh:49:11: note: this is the location of the previous definition
   49 | #  define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION )
      |           ^~~~~~~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o nco_gsl.o nco_gsl.cc
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
nco_gsl.cc:14:1: warning: ‘double compute_covariance(const double*, size_t, const double*, size_t, size_t, double, double, const double*)’ defined but not used [-Wunused-function]
   14 | compute_covariance
      | ^~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o fmc_all_cls.o fmc_all_cls.cc
fmc_all_cls.cc: In member function ‘virtual var_sct* mth2_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)’:
fmc_all_cls.cc:1965:60: warning: ‘__builtin___snprintf_chk’ output truncated before the last format character [-Wformat-truncation=]
 1965 |                snprintf(units_new_sng,NCO_MAX_LEN_DATE_SNG,"days since %d-01-01 00:00:00",lcl_tm_sct.year);
      |                                                            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:970,
                 from /usr/include/c++/14/cstdio:42,
                 from /usr/include/c++/14/ext/string_conversions.h:45,
                 from /usr/include/c++/14/bits/basic_string.h:4154,
                 from /usr/include/c++/14/string:54,
                 from fmc_all_cls.hh:14,
                 from fmc_all_cls.cc:10:
In function ‘int snprintf(char*, size_t, const char*, ...)’,
    inlined from ‘virtual var_sct* mth2_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)’ at fmc_all_cls.cc:1965:24:
/usr/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 28 and 38 bytes into a destination of size 27
   68 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                    __glibc_objsize (__s), __fmt,
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   70 |                                    __va_arg_pack ());
      |                                    ~~~~~~~~~~~~~~~~~
fmc_all_cls.cc: In member function ‘virtual var_sct* print_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)’:
fmc_all_cls.cc:5634:15: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
 5634 |        strncpy(var->val.cp,cp,sz);
      |               ^
fmc_all_cls.cc:5630:17: note: length computed here
 5630 |        sz=strlen(cp);
      |           ~~~~~~^~~~
fmc_all_cls.cc: In member function ‘virtual var_sct* bil_cls::fnd(antlr::RefAST, antlr::RefAST, fmc_cls&, ncoTree&)’:
fmc_all_cls.cc:3794:19: warning: ‘var_arr’ may be used uninitialized [-Wmaybe-uninitialized]
 3794 |   in_typ=var_arr[0]->type;
      |          ~~~~~~~~~^
fmc_all_cls.cc:3740:12: note: ‘var_arr’ declared here
 3740 |   var_sct *var_arr[6];
      |            ^~~~~~~
fmc_all_cls.cc:3798:31: warning: ‘var_arr’ may be used uninitialized [-Wmaybe-uninitialized]
 3798 |     var_arr[1]=nco_var_cnf_typ(in_typ,var_arr[1]);
      |                ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
fmc_all_cls.cc:3740:12: note: ‘var_arr’ declared here
 3740 |   var_sct *var_arr[6];
      |            ^~~~~~~
fmc_all_cls.cc:3815:19: warning: ‘var_arr’ may be used uninitialized [-Wmaybe-uninitialized]
 3815 |       if(var_arr[1]->nbr_dim < 2)
      |          ~~~~~~~~~^
fmc_all_cls.cc:3740:12: note: ‘var_arr’ declared here
 3740 |   var_sct *var_arr[6];
      |            ^~~~~~~
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o ncoParser.o ncoParser.cpp
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf -I/usr/include/udunits2 -I/usr/include  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -c -o ncoTree.o ncoTree.cpp
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=link g++  -O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  ../nco/libnco.la -lantlr -lgsl -lgslcblas -lm -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o  -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm
libtool: link: g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o  ../nco/.libs/libnco.so -L/usr/lib64 -lantlr -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Nothing to be done for 'all-am'.
Making all in man
make[2]: Nothing to be done for 'all'.
Making all in doc
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
restore=: && backupdir=".am$$" && \
am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \
rm -rf $backupdir && mkdir $backupdir && \
if (/bin/sh '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \
  for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \
    if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \
  done; \
else :; fi && \
cd "$am__cwd"; \
if /bin/sh '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/autobld/missing' makeinfo   -I . \
 -o nco.info nco.texi; \
then \
  rc=0; \
  CDPATH="${ZSH_VERSION+.}:" && cd .; \
else \
  rc=$?; \
  CDPATH="${ZSH_VERSION+.}:" && cd . && \
  $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \
fi; \
rm -rf $backupdir; exit $rc
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
+ make -C doc html pdf
make: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
rm -rf nco.htp
if /bin/sh '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/autobld/missing' makeinfo --html --ifinfo --no-split  -I . \
 -o nco.htp nco.texi; \
then \
  rm -rf nco.html && mv nco.htp nco.html; \
else \
  rm -rf nco.htp; exit 1; \
fi
TEXINPUTS="../autobld:$TEXINPUTS" \
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texi2dvi --pdf --batch  -I .  --build-dir=nco.t2p -o nco.pdf  \
nco.texi
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(Foreword) [1] [2] (Summary) [3] [4] Chapter 1 [5] [6]
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[88]
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[]@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@
textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex
trm '[] or
[89] [90]
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 []@texttt # Average seasonally contiguous climatological monthly means into NH
 winter[] 
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 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n
c ANN.nc[] 
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 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl
m_??.nc ANN.nc[] 
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 []@texttt # Average seasonally discontiguous diurnally resolved means into a s
eason[] 
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 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n
c ANN.nc[] 
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 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli
matology[] 
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 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl
m_??.nc ANN.nc[] 
[100] [101]
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[114]
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[115] [116] [117] [118] </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fg
r/qnt_cr_dfl.png> [119]
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[120] [121] </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fgr/qnt_cr_bz2
.png> [122] [123]
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 </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fgr/qnt_cr_zst.png>
[124] [125] [126] [127] [128] [129]
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[]@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm-
[130] [131] [132] [133]
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 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h
0.0001-01.nc[] 
[134] [135] [136] [137] [138] [139]
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 [][] 
[140] [141] [142] [143] [144] [145] [146]
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 []      @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size-
1))' \[] 
[147]
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 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in
.nc out.nc[] 
[148] [149] [150] [151]
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 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te
mperature data[] 
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 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i
n.nc ~/foo.nc[] 
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 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[152]
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 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[153]
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 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc 
in.nc[] 
[154] [155] [156]
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 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n
c out.nc[] 
[157] [158]
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[159] [160]
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@texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell
[]@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te
xttt dcEdge[]@textrm ,
[161] [162] [163] [164] Chapter 4
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@texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by
[165] [166] [167]
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 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [
--hdr_pad @textttsl nbr@texttt ] [--hpss][] 
[168] [169] [170] [171] [172]
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 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime
nsion)[] 
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 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size 
is fixed[] 
[173] [174]
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 [][] 
[175]
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 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi-
dimensional output[] 
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
[176]
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
[177] [178] [179] [180]
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[187] [188] [189]
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[190] [191]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[192] [193]
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[]@textrm Consider ir-reg-u-
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[194]
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[195]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
[196]
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[197] [198] [199]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
[200]
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[201] [202]
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[205] [206]
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[207] [208] [209] [210]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[211] [212] [213] [214] [215] [216] [217] [218]
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[]@texttt status=@textbf gsl[]fit[]linear
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
[219]
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[220]
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
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 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[221] [222]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[223] [224] [225] [226]
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 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
[227]
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
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 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[228] [229]
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[230]
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
[231] [232] [233] [234] [235] [236] [237]
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 [][] 
[238]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl
b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] 
[239] [240] [241] [242] [243]
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 [][] 
[244]
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 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ]
 [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts
l yr_end@texttt ][] 
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 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n
tv_tms] [--no_stg_grd] [--no_stdin][] 
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 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso
ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][]
 
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 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio]
 [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio
n][] 
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 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o
utput=drc_out[] 
[245] [246] [247] [248] [249] [250] [251] [252] [253]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
[254] [255] [256]
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 
9 -o $drc_out[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1
 -e 9 -o $drc_out < foo[] 
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 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9
]*.nc[] 
[257]
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@texttt 01.nc[]@textrm , and @texttt v2.LR.historical_
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 [][] 
[258]
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
[259] [260]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm -
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm -
[261]
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg
r -r map.nc \[] 
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[262] [263]
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 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu
 -N ncclimo[] 
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 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc
climo[] 
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 []@texttt salloc  -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na
me=ncclimo[] 
[264]
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 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc
limo \[] 
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[268] [269] [270] [271]
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 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt
 ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt
sl sz_lmn@texttt ][] 
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 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf
x sfx][] 
[272] [273] [274]
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 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w
eights[] 
[275] [276] [277]
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 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em
issions.nc[] 
[278]
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 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [-
-chk_nan] [--chk_xtn][] 
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 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt
 ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt
sl sz_lmn@texttt ][] 
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 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz 
@textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] 
[279] [280]
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 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[]
 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_
rec_var[] 
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 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n
c[] 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only
[] 
[281]
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 []@texttt <ncml:values separator="*">1964-03-13T21:09:0.000000</ncml:values>[]
 
[282] [283]
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 []@texttt ncgen      -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc
gen[] 
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 []@texttt ncgen      -b -o in.hdf  in.cdl  # Fails: Some valid netCDF CDL brea
ks HDF ncgen[] 
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 []@texttt hncgen     -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p
ackages[] 
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 []@texttt h4_ncgen   -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda
 packages[] 
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 []@texttt ncgen-hdf  -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De
bian packages[] 
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 []@texttt hdp dumpsds hdf.hdf              # ncdump/h5dump-equivalent for HDF4
[] 
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 []@texttt h4_ncdump dumpsds hdf.hdf        # ncdump/h5dump-equivalent for HDF4
[] 
[291]
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 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out
.nc[] 
[292] [293]
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567,
 0.12345678, 0.123456789 ;[] 
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 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0
.123 ;[] 
[298]
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 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc
edrm NcML[] @textrm out-put:
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[300]
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 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/
/' | sort[] 
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 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" |
 cut -f 11- -d ' ' | sort[] 
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 []@texttt # Change values to be sure original values are not copied in followi
ng step[] 
[304] [305] [306] [307] [308]
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 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex
ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[],
[309]
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 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex
ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[],
[310] [311] [312] [313] [314]
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 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension 
named "time"[] 
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 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim
ension[] 
[315]
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 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth
_dbl|flt][] 
[316] [317] [318] [319] [320] [321]
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 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar
ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] 
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 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text
tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--mpt_mss] [--msh_fl=@textttsl msh_
fl@texttt ][] 
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 []@texttt [--msk_apl] [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@texttt
sl msk_out@texttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl 
mss_val@texttt ][] 
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 []@texttt [--no_add_fll] [--no_cll_msr] [--no_frm_trm] [--no_permute] [--no_st
din] [--no_stg_grd][] 
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 []@texttt [--vrt_in=@textttsl vrt_fl@texttt ] [--vrt_out=@textttsl vrt_fl@text
tt ] [--vrt_nm=@textttsl vrt_nm@texttt ] [--vrt_ntp=@textttsl vrt_ntp@texttt ] 
[--vrt_xtr=@textttsl vrt_xtr@texttt ][] 
[322] [323]
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@texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr
m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n
EdgesOnCell[]@textrm ,
[324] [325]
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 []@reducedrm MOAB[]
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 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho
d fv
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 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 2 --out_type
 cgll
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 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type cgll --in_np 4 --out_ty
pe fv
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 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho
d fv
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 []@reducedrm TR[] @textrm op-tions: `@texttt --in_type fv --in_np 1 --out_type
 cgll
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[371] [372] [373] [374] Chapter 5 [375] [376] [377] [378] [379] Chapter 6
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Chapter 9 [409] [410]
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[416] Chapter 10 [417] [418] (General Index) [419] [420] [421] [422] )
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[-2] [-3] [-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] [2] (Summary)
[3] [4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12] [13]
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[14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26]
Chapter 3 [27] [28] [29] [30] [31] [32]
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[]@textrm Long op-tions: `@texttt --mro[]@textrm '[] `@texttt --dimension
[71]
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 []@texttt ncra -O -d time,1850-03-01T00:00:01,,8760,744,24 -n 150,4,1 1850.nc 
clm_drn.nc[] 
[73] [74] [75] [76] [77] [78] [79] [80] [81] [82]
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[]@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@
textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex
trm '[] or
[89] [90]
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 []@texttt # Average seasonally contiguous climatological monthly means into NH
 winter[] 
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 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n
c ANN.nc[] 
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 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl
m_??.nc ANN.nc[] 
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 []@texttt # Average seasonally discontiguous diurnally resolved means into a s
eason[] 
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 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n
c ANN.nc[] 
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 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli
matology[] 
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 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl
m_??.nc ANN.nc[] 
[100] [101]
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[114]
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[115] [116] [117] [118] </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fg
r/qnt_cr_dfl.png> [119]
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[120] [121] </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fgr/qnt_cr_bz2
.png> [122] [123]
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 </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fgr/qnt_cr_zst.png>
[124] [125] [126] [127] [128] [129]
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[]@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm-
[130] [131] [132] [133]
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 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h
0.0001-01.nc[] 
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 []      @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size-
1))' \[] 
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 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in
.nc out.nc[] 
[147] [148] [149] [150] [151]
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 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te
mperature data[] 
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 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i
n.nc ~/foo.nc[] 
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 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[152]
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 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[153]
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 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc 
in.nc[] 
[154] [155] [156]
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 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n
c out.nc[] 
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@texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell
[]@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te
xttt dcEdge[]@textrm ,
[161] [162] [163] [164] Chapter 4
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@texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by
[165] [166] [167]
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 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [
--hdr_pad @textttsl nbr@texttt ] [--hpss][] 
[168] [169] [170] [171] [172]
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 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime
nsion)[] 
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 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size 
is fixed[] 
[173] [174]
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[175]
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 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi-
dimensional output[] 
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
[176]
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[190] [191]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[192] [193]
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[]@textrm Consider ir-reg-u-
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[194]
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[195]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
[196]
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[197] [198] [199]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
[200]
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[201] [202]
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[207] [208] [209] [210]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[211] [212] [213] [214] [215] [216] [217] [218]
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[]@texttt status=@textbf gsl[]fit[]linear
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
[219]
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[220]
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
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 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[221] [222]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[223] [224] [225] [226]
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 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
[227]
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
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 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[228] [229]
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[230]
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
[231] [232] [233] [234] [235] [236] [237]
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 [][] 
[238]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl
b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] 
[239] [240] [241] [242] [243]
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 [][] 
[244]
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 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ]
 [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts
l yr_end@texttt ][] 
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 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n
tv_tms] [--no_stg_grd] [--no_stdin][] 
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 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso
ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][]
 
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 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio]
 [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio
n][] 
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 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o
utput=drc_out[] 
[245] [246] [247] [248] [249] [250] [251] [252] [253]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
[254] [255] [256]
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 
9 -o $drc_out[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1
 -e 9 -o $drc_out < foo[] 
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 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9
]*.nc[] 
[257]
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@texttt 01.nc[]@textrm , and @texttt v2.LR.historical_
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 [][] 
[258]
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
[259] [260]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm -
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm -
[261]
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg
r -r map.nc \[] 
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[262] [263]
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 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu
 -N ncclimo[] 
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 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc
climo[] 
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 []@texttt salloc  -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na
me=ncclimo[] 
[264]
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 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc
limo \[] 
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[265] [266] [267]
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[268] [269] [270] [271]
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 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt
 ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt
sl sz_lmn@texttt ][] 
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 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf
x sfx][] 
[272] [273] [274]
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 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w
eights[] 
[275] [276] [277]
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 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em
issions.nc[] 
[278]
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 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [-
-chk_nan] [--chk_xtn][] 
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 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt
 ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt
sl sz_lmn@texttt ][] 
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 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz 
@textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] 
[279] [280]
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 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[]
 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_
rec_var[] 
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 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n
c[] 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only
[] 
[281]
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 []@texttt <ncml:values separator="*">1964-03-13T21:09:0.000000</ncml:values>[]
 
[282] [283]
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[290]
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 []@texttt ncgen      -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc
gen[] 
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 []@texttt ncgen      -b -o in.hdf  in.cdl  # Fails: Some valid netCDF CDL brea
ks HDF ncgen[] 
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 []@texttt hncgen     -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p
ackages[] 
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 []@texttt h4_ncgen   -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda
 packages[] 
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 []@texttt ncgen-hdf  -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De
bian packages[] 
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 []@texttt hdp dumpsds hdf.hdf              # ncdump/h5dump-equivalent for HDF4
[] 
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 []@texttt h4_ncdump dumpsds hdf.hdf        # ncdump/h5dump-equivalent for HDF4
[] 
[291]
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 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out
.nc[] 
[292] [293]
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567,
 0.12345678, 0.123456789 ;[] 
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 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0
.123 ;[] 
[298]
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[299]
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 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc
edrm NcML[] @textrm out-put:
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[300]
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 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/
/' | sort[] 
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 []@texttt # Change values to be sure original values are not copied in followi
ng step[] 
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 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension 
named "time"[] 
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 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim
ension[] 
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 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth
_dbl|flt][] 
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ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] 
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 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text
tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--mpt_mss] [--msh_fl=@textttsl msh_
fl@texttt ][] 
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 []@texttt [--msk_apl] [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@texttt
sl msk_out@texttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl 
mss_val@texttt ][] 
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din] [--no_stg_grd][] 
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tt ] [--vrt_nm=@textttsl vrt_nm@texttt ] [--vrt_ntp=@textttsl vrt_ntp@texttt ] 
[--vrt_xtr=@textttsl vrt_xtr@texttt ][] 
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@texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr
m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n
EdgesOnCell[]@textrm ,
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d fv
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 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te
xttt ncremap[] @textrm sup-ports
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ist of the al-go-rithms
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 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f
ault list is
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 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te
xtrm .
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 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers,nBio
LayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers,maxEdges,MaxEdges2,nCateg
ories,R3,ONE,TWO,FOUR,nEdges,nCells[]@textrm ,
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[349] [350] [351] [352] [353]
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ion[] 
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c # Manual[] 
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[359] [360]
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pas_ncpdq.nc[] 
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nc -O ~/rgr[] 
[361] [362] [363] [364] [365] [366] [367]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl
b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] 
[371] [372] [373] [374] Chapter 5 [375] [376] [377] [378] [379] Chapter 6
[380] [381] Chapter 7 [382]
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[387]) </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/fgr1.png>
[388] (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/glb_avg.sh
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[390]) </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/fgr2.png>
[391] [392] (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/ann_avg.sh
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) Chapter 8 [407] [408]
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Chapter 9 [409] [410]
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[416] Chapter 10 [417] [418] (General Index) [419] [420] (./nco.cps [421]
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This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex)
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[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./nco.toc [-1]
[-2] [-3] [-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] [2] (Summary)
[3] [4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12] [13]
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[14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26]
Chapter 3 [27] [28] [29] [30] [31] [32]
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 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis.
dailyavgs/surface/pres.sfc.1969.nc ~/foo.nc[] 
[41]
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_velocity http://nomads.ncep.noaa.gov:9090/dods/rtofs/rtofs_global20140303/rtof
s_glo_2ds_forecast_daily_prog ~/foo.nc[] 
[42]
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mic types[] 
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m to /[] 
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clm_drn.nc[] 
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[]@textrm `@texttt --rnr=@textttsl rnr_thr[]@textrm '[] or `@texttt --rgr_rnr=@
textttsl rnr_thr[]@textrm '[] or `@texttt --renormalize=@textttsl rnr_thr[]@tex
trm '[] or
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 []@texttt # Average seasonally contiguous climatological monthly means into NH
 winter[] 
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 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n
c ANN.nc[] 
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m_??.nc ANN.nc[] 
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 []@texttt # Average seasonally discontiguous diurnally resolved means into a s
eason[] 
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c ANN.nc[] 
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 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli
matology[] 
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[115] [116] [117] [118] </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/fg
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[]@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm-
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mperature data[] 
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n.nc ~/foo.nc[] 
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[159] [160]
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@texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell
[]@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te
xttt dcEdge[]@textrm ,
[161] [162] [163] [164] Chapter 4
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@texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by
[165] [166] [167]
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 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [
--hdr_pad @textttsl nbr@texttt ] [--hpss][] 
[168] [169] [170] [171] [172]
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 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime
nsion)[] 
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 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size 
is fixed[] 
[173] [174]
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 [][] 
[175]
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 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi-
dimensional output[] 
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
[176]
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
[177] [178] [179] [180]
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[187] [188] [189]
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[190] [191]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[192] [193]
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[]@textrm Consider ir-reg-u-
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[194]
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[195]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
[196]
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[197] [198] [199]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
[200]
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[201] [202]
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[205] [206]
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[207] [208] [209] [210]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[211] [212] [213] [214] [215] [216] [217] [218]
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[]@texttt status=@textbf gsl[]fit[]linear
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
[219]
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[220]
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
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 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[221] [222]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[223] [224] [225] [226]
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 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
[227]
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
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 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[228] [229]
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[230]
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
[231] [232] [233] [234] [235] [236] [237]
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 [][] 
[238]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl
b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] 
[239] [240] [241] [242] [243]
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 [][] 
[244]
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 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ]
 [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts
l yr_end@texttt ][] 
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 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n
tv_tms] [--no_stg_grd] [--no_stdin][] 
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 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso
ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][]
 
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 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio]
 [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio
n][] 
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 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o
utput=drc_out[] 
[245] [246] [247] [248] [249] [250] [251] [252] [253]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
[254] [255] [256]
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 
9 -o $drc_out[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1
 -e 9 -o $drc_out < foo[] 
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 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9
]*.nc[] 
[257]
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@texttt 01.nc[]@textrm , and @texttt v2.LR.historical_
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 [][] 
[258]
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
[259] [260]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm -
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm -
[261]
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg
r -r map.nc \[] 
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[262] [263]
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 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu
 -N ncclimo[] 
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 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc
climo[] 
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 []@texttt salloc  -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na
me=ncclimo[] 
[264]
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 [][] 
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 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc
limo \[] 
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[265] [266] [267]
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 [][] 
[268] [269] [270] [271]
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 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt
 ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt
sl sz_lmn@texttt ][] 
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 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf
x sfx][] 
[272] [273] [274]
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 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w
eights[] 
[275] [276] [277]
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 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em
issions.nc[] 
[278]
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 []@texttt [-C] [-c] [--cdl] [--chk_bnd] [--chk_chr] [--chk_map] [--chk_mss] [-
-chk_nan] [--chk_xtn][] 
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 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt
 ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt
sl sz_lmn@texttt ][] 
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 []@texttt [-H] [-h] [--hdn] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [--hrz 
@textttsl fl_hrz@texttt ] [--jsn] [--jsn_fmt @textttsl lvl@texttt ][] 
[279] [280]
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 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[]
 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_
rec_var[] 
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 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n
c[] 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only
[] 
[281]
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 []@texttt <ncml:values separator="*">1964-03-13T21:09:0.000000</ncml:values>[]
 
[282] [283]
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 []@texttt ncgen      -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc
gen[] 
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 []@texttt ncgen      -b -o in.hdf  in.cdl  # Fails: Some valid netCDF CDL brea
ks HDF ncgen[] 
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 []@texttt hncgen     -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p
ackages[] 
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 []@texttt h4_ncgen   -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda
 packages[] 
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 []@texttt ncgen-hdf  -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De
bian packages[] 
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 []@texttt hdp dumpsds hdf.hdf              # ncdump/h5dump-equivalent for HDF4
[] 
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 []@texttt h4_ncdump dumpsds hdf.hdf        # ncdump/h5dump-equivalent for HDF4
[] 
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.nc[] 
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567,
 0.12345678, 0.123456789 ;[] 
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 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0
.123 ;[] 
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 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc
edrm NcML[] @textrm out-put:
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/' | sort[] 
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 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" |
 cut -f 11- -d ' ' | sort[] 
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 []@texttt # Change values to be sure original values are not copied in followi
ng step[] 
[304] [305] [306] [307] [308]
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 []@textsl pck[]map[] @textrm key val-ues: `@texttt dbl_flt[]@textrm '[], `@tex
ttt pck_map_dbl_flt[]@textrm '[], `@texttt dbl_sgl[]@textrm '[],
[309]
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 []@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex
ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[],
[310] [311] [312] [313] [314]
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 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension 
named "time"[] 
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 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim
ension[] 
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 []@texttt [--prm_int] [--prw wgt_arr] [-R] [-r] [--ram_all] [--rec_apn] [--rth
_dbl|flt][] 
[316] [317] [318] [319] [320] [321]
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 []@texttt [-a @textttsl alg_typ@texttt ] [--a2o] [--add_fll] [--alg_lst] [--ar
ea_dgn] [--cmp @textttsl cmp_sng@texttt ][] 
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 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text
tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--mpt_mss] [--msh_fl=@textttsl msh_
fl@texttt ][] 
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 []@texttt [--msk_apl] [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@texttt
sl msk_out@texttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl 
mss_val@texttt ][] 
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 []@texttt [--no_add_fll] [--no_cll_msr] [--no_frm_trm] [--no_permute] [--no_st
din] [--no_stg_grd][] 
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 []@texttt [--vrt_in=@textttsl vrt_fl@texttt ] [--vrt_out=@textttsl vrt_fl@text
tt ] [--vrt_nm=@textttsl vrt_nm@texttt ] [--vrt_ntp=@textttsl vrt_ntp@texttt ] 
[--vrt_xtr=@textttsl vrt_xtr@texttt ][] 
[322] [323]
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@texttt lonCell[]@textrm , @texttt lonEdge[]@textrm , @texttt lonVertex[]@textr
m , @texttt maxLevelEdgeTop[]@textrm , @texttt meshDensity[]@textrm , @texttt n
EdgesOnCell[]@textrm ,
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 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho
d fv
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 cgll
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pe fv
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d fv
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d cgll
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 []@textrm As of @reducedrm NCO[] @textrm ver-sion 5.2.0 (Febru-ary, 2024), @te
xttt ncremap[] @textrm sup-ports
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 @textrm `@texttt --alg_lst=@textttsl alg_lst[]@textrm '[], a comma-separated l
ist of the al-go-rithms
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 @textrm that @reducedrm MWF[]@textrm -mode uses to cre-ate map-files. The de-f
ault list is
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 @texttt esmfaave,esmfbilin,ncoaave,ncoidw,traave,trbilin,trfv2,trintbilin[]@te
xtrm .
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 @texttt Time,depth,nVertInterfaces,nVertLevels,nVertLevelsP1,nZBGCTracers,nBio
LayersP1,nAlgaeIceLayers,nDisIronIceLayers,nIceLayers,maxEdges,MaxEdges2,nCateg
ories,R3,ONE,TWO,FOUR,nEdges,nCells[]@textrm ,
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[345] [346]
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 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] 
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 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out.
nc[] 
[347] [348]
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 []@texttt ncremap --permute=Time,new_dim,nCells  --map=map.nc in.nc out.nc[] 
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 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] 
[349] [350] [351] [352] [353]
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 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent
ion[] 
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 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n
c # Manual[] 
[354] [355]
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 []@texttt ncremap --vrt_in=vrt.nc --
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 []@texttt ncremap --vrt_in=vrt.nc --
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 []@texttt ncremap --ps_rtn --ps_nm=ps --vrt_out=ncep.nc in.nc out_ncep.nc[] 
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 []@texttt ncremap --ps_rtn -v T,Q,U,PS --vrt_out=ncep.nc in.nc out_ncep.nc[] 
[359] [360]
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 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m
pas_ncpdq.nc[] 
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 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62.
nc -O ~/rgr[] 
[361] [362] [363] [364] [365] [366] [367]
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[369] [370]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl
b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] 
[371] [372] [373] [374] Chapter 5 [375] [376] [377] [378] [379] Chapter 6
[380] [381] Chapter 7 [382]
(/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/cmb_fl.sh
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) (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/cmb_fl_grp.sh
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[387]) </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/fgr1.png>
[388] (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/glb_avg.sh
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[390]) </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/fgr2.png>
[391] [392] (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/ann_avg.sh
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[395]
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) (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/gsl_rgr.nco
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[397]) </builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/fgr3.png>
[398] (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/mcc.sh
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) (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/mcc_grp.sh [401])
(/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/rgr.sh [402]
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) (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/bi_interp.nco
[403]
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) (/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/xmp/crd.nco
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) Chapter 8 [407] [408]
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Chapter 9 [409] [410]
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[411] [412] [413] [414]
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[416] Chapter 10 [417] [418] (General Index) [419] [420] (./nco.cps [421]
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[440] [441] [442]) [443] [444] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts
/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmm
i9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texlive/texm
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type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-dist/fonts/type
1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsf
onts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti8
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></
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are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/te
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exmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on nco.pdf (452 pages, 2038538 bytes).
Transcript written on nco.log.
make: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.X71MA1
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ '[' /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT
++ dirname /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/nco-5.2.7-build
+ mkdir /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT
+ CFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2  -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed   -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd nco-5.2.7
+ /usr/bin/make install DESTDIR=/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT 'INSTALL=/usr/bin/install -p'
Making install in data
make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/data'
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/data'
 /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin'
 /usr/bin/install -p ncclimo ncremap ncz2psx ncchecker '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin'
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/data'
make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/data'
Making install in src
make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src'
Making install in nco
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
 /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64'
 /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -p   libnco.la '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64'
libtool: install: /usr/bin/install -p .libs/libnco-5.2.7.so /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco-5.2.7.so
libtool: install: (cd /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64 && { ln -s -f libnco-5.2.7.so libnco.so || { rm -f libnco.so && ln -s libnco-5.2.7.so libnco.so; }; })
libtool: install: /usr/bin/install -p .libs/libnco.lai /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco.la
libtool: install: /usr/bin/install -p .libs/libnco.a /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco.a
libtool: install: chmod 644 /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco.a
libtool: install: ranlib /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco.a
libtool: warning: remember to run 'libtool --finish /usr/lib64'
 /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin'
  /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -p ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin'
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncatted /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncatted
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncbo /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncbo
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncecat /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncecat
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncflint /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncflint
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncks /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncks
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncpdq /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncpdq
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncra /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncra
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncrename /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncrename
libtool: warning: 'libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncwa /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncwa
/usr/bin/make  install-exec-hook
make[4]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
cd /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff)
cd /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea)
cd /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces)
cd /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat)
make[4]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco'
Making install in nco++
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
 /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin'
  /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -p ncap2 '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin'
libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib64'
libtool: install: /usr/bin/install -p .libs/ncap2 /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncap2
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src/nco++'
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src'
make[3]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src'
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src'
make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/src'
Making install in man
make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/man'
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/man'
make[2]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/man/man1'
 /usr/bin/install -p -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncpdq.1 ncra.1 ncrcat.1 ncremap.1 ncrename.1 ncwa.1 ncz2psx.1 ncchecker.1 '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/man/man1'
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/man'
make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/man'
Making install in doc
make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
make[2]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/info'
 /usr/bin/install -p -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/info'
 install-info --info-dir='/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/info' '/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/info/nco.info'
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc'
make[1]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7'
make[2]: Entering directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7'
make[1]: Leaving directory '/builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7'
+ rm /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco.la
+ rm -f /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/info/dir
+ chrpath -d -k /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncap2 /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncatted /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncbo /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncchecker /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncclimo /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncdiff /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncea /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncecat /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/nces /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncflint /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncks /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncpdq /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncra /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncrcat /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncremap /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncrename /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncwa /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncz2psx
`/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncchecker' probably isn't an ELF file.
elf_open: Exec format error
`/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncclimo' probably isn't an ELF file.
elf_open: Exec format error
`/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncremap' probably isn't an ELF file.
elf_open: Exec format error
`/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/bin/ncz2psx' probably isn't an ELF file.
elf_open: Exec format error
+ :
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 5.2.7-1.fc41 --unique-debug-suffix -5.2.7-1.fc41.riscv64 --unique-debug-src-base nco-5.2.7-1.fc41.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7
find-debuginfo: starting
Extracting debug info from 11 files
DWARF-compressing 11 files
sepdebugcrcfix: Updated 11 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/nco-5.2.7-1.fc41.riscv64
cpio: src/nco/ncap_yacc.h: Cannot stat: No such file or directory
cpio: src/nco/ncap_yacc.y: Cannot stat: No such file or directory
12711 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/ncz2psx from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/bin/ncclimo from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/bin/ncremap from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/bin/ncchecker from /usr/bin/env bash to #!/usr/bin/bash
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT
/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/lib64/libnco.a: replacing with normalized version
Scanned 20 directories and 208 files,
               processed 1 inodes,
               1 modified (1 replaced + 0 rewritten),
               0 unsupported format, 0 errors
Reading /builddir/build/BUILD/nco-5.2.7-build/SPECPARTS/rpm-debuginfo.specpart
Processing files: nco-5.2.7-1.fc41.riscv64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ZoG1RQ
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ cd nco-5.2.7
+ DOCDIR=/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/README /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/README.md /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/rtfm.txt /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/nco.html /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/nco.pdf /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/nco.css /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/index.shtml /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/TODO /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/ChangeLog /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/nco.png /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/nco_news.shtml /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/nsf.png /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/doc/nco
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.mrdnn7
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ cd nco-5.2.7
+ LICENSEDIR=/builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/licenses/nco
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/licenses/nco
+ cp -pr /builddir/build/BUILD/nco-5.2.7-build/nco-5.2.7/doc/LICENSE /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT/usr/share/licenses/nco
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: libnco-5.2.7.so()(64bit) nco = 5.2.7-1.fc41 nco(riscv-64) = 5.2.7-1.fc41
Requires(interp): /sbin/ldconfig /sbin/ldconfig
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /sbin/ldconfig
Requires(postun): /sbin/ldconfig
Requires: /usr/bin/bash ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libcurl.so.4()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.3.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libnco-5.2.7.so()(64bit) libnetcdf.so.19()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libudunits2.so.0()(64bit) rtld(GNU_HASH)
Processing files: nco-devel-5.2.7-1.fc41.riscv64
Provides: nco-devel = 5.2.7-1.fc41 nco-devel(riscv-64) = 5.2.7-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: nco-static-5.2.7-1.fc41.riscv64
Provides: nco-static = 5.2.7-1.fc41 nco-static(riscv-64) = 5.2.7-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: nco-debugsource-5.2.7-1.fc41.riscv64
Provides: nco-debugsource = 5.2.7-1.fc41 nco-debugsource(riscv-64) = 5.2.7-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: nco-debuginfo-5.2.7-1.fc41.riscv64
Provides: debuginfo(build-id) = 1238d985d4083480de81c08378c3ba36630c1ca9 debuginfo(build-id) = 1610b07c6080314b7748e75d12622974106e8e84 debuginfo(build-id) = 1c3ac92f633b053a05cceaccc84d337d46679e90 debuginfo(build-id) = a8b680676eccd9d8b0cd76776d5829ab2bf929b7 debuginfo(build-id) = afe83c16875327f06a74ec41ece6df5796e2446f debuginfo(build-id) = b8dd6b5b824a2b4e7218b96e914defad37c4eb7b debuginfo(build-id) = c30ec37fda11f3a1080b4071b68e1723de61a30f debuginfo(build-id) = c494bd349b12677cfc1595f2e6334f82d670e245 debuginfo(build-id) = e9a1cafe2da495c8f8a34fca23a07a1a13b1639c debuginfo(build-id) = ea0c46428f982cabe80f33349ed811bf48f5b371 debuginfo(build-id) = ff248f6b49af14bbb4b9a8189e31cdda290f7d4a libnco-5.2.7.so-5.2.7-1.fc41.riscv64.debug()(64bit) nco-debuginfo = 5.2.7-1.fc41 nco-debuginfo(riscv-64) = 5.2.7-1.fc41
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: nco-debugsource(riscv-64) = 5.2.7-1.fc41
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/nco-5.2.7-build/BUILDROOT
Wrote: /builddir/build/RPMS/nco-debugsource-5.2.7-1.fc41.riscv64.rpm
Wrote: /builddir/build/RPMS/nco-devel-5.2.7-1.fc41.riscv64.rpm
Wrote: /builddir/build/RPMS/nco-5.2.7-1.fc41.riscv64.rpm
Wrote: /builddir/build/RPMS/nco-debuginfo-5.2.7-1.fc41.riscv64.rpm
Wrote: /builddir/build/RPMS/nco-static-5.2.7-1.fc41.riscv64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.T0eSCf
+ umask 022
+ cd /builddir/build/BUILD/nco-5.2.7-build
+ test -d /builddir/build/BUILD/nco-5.2.7-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/nco-5.2.7-build
+ rm -rf /builddir/build/BUILD/nco-5.2.7-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0