Mock Version: 1.4.9 Mock Version: 1.4.9 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'], chrootPath='/var/lib/mock/f29-build-7671-1900/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False BUILDSTDERR: sh: perl: command not found BUILDSTDERR: sh: /usr/bin/perl: No such file or directory BUILDSTDERR: sh: /usr/bin/perl: No such file or directory BUILDSTDERR: sh: /usr/bin/perl: No such file or directory Building target platforms: riscv64 Building for target riscv64 Wrote: /builddir/build/SRPMS/libsedml-0.4.3-10.fc29.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'], chrootPath='/var/lib/mock/f29-build-7671-1900/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False Building target platforms: riscv64 Building for target riscv64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.7BpGK8 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSEDML-0.4.3 + /usr/bin/gzip -dc /builddir/build/SOURCES/libSEDML-0.4.3.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libSEDML-0.4.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . Patch #0 (libsedml-fix_install_libpaths.patch): + echo 'Patch #0 (libsedml-fix_install_libpaths.patch):' + /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 766 (offset 54 lines). patching file bindings/ruby/CMakeLists.txt Hunk #1 succeeded at 130 (offset 14 lines). patching file bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 132 (offset 6 lines). patching file bindings/perl/CMakeLists.txt Hunk #1 succeeded at 117 (offset 4 lines). patching file bindings/java/CMakeLists.txt Hunk #1 succeeded at 93 (offset 9 lines). patching file bindings/r/CMakeLists.txt Hunk #1 succeeded at 222 (offset 14 lines). + sed -e 's| lib/cmake | lib64/cmake |g' -i CMakeLists.txt + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBNUML.cmake + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBSBML.cmake + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.S90pxq + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + mkdir build2 + pushd build2 ~/build/BUILD/libSEDML-0.4.3/build2 ~/build/BUILD/libSEDML-0.4.3 + export 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' BUILDSTDERR: ++ echo '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' BUILDSTDERR: ++ sed -e s/-Werror=format-security/-Wno-error=unused-value/g + SEDMLOPT_FLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export 'CFLAGS=-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export 'CXXFLAGS=-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CXXFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.6m -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.6m.so -DWITH_JAVA:BOOL=OFF -DWITH_SWIG:BOOL=OFF -DWITH_PERL:BOOL=OFF -DWITH_RUBY:BOOL=OFF -DWITH_R:BOOL=OFF -DR_INCLUDE_DIRS:PATH=/usr/include/R -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF -DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES .. -- The C compiler identification is GNU 8.1.1 -- The CXX compiler identification is GNU 8.1.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Looking for sbml-static -- Found LIBSBML: sbml-static -- Looking for numl-static -- Found LIBNUML: numl-static -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Found PythonInterp: /usr/bin/python3 (found version "3.6.5") -- Found PythonLibs: /usr/lib64/libpython3.6m.so (found version "3.6.5") -- ---------------------------------------------------------------------- libSEDML version 0.4.3 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 4.15.0-00044-g2b0aa1de45f6 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="0.4.3" -DPACKAGE_NAME="libsedml" CFLAGS = -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread SBML library configuration: SBML library = /usr/lib64/libsbml.so SBML include = -I/usr/include NUML library configuration: NUML library = /lib64/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using Python = /usr/bin/python3 -- Using libcheck = /usr/lib64/libcheck.so -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done -- Generating done BUILDSTDERR: CMake Warning: BUILDSTDERR: Manually-specified variables were not used by the project: BUILDSTDERR: CMAKE_Fortran_FLAGS_RELEASE BUILDSTDERR: CMAKE_SKIP_INSTALL_RPATH BUILDSTDERR: CSHARP_COMPILER BUILDSTDERR: INCLUDE_INSTALL_DIR BUILDSTDERR: LIBSBML_STATIC BUILDSTDERR: LIB_INSTALL_DIR BUILDSTDERR: LIB_SUFFIX BUILDSTDERR: R_INCLUDE_DIRS BUILDSTDERR: SHARE_INSTALL_PREFIX BUILDSTDERR: SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSEDML-0.4.3/build2 + make -j4 /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build2 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 1%] Swig Python source cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/libsedml.i Scanning dependencies of target sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build Scanning dependencies of target sedml-static make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 2%] Building CXX object sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp [ 4%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. [ 5%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] BUILDSTDERR: bool sedmlDeclared = false; BUILDSTDERR: ^~~~~~~~~~~~~ [ 7%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp [ 8%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o [ 10%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp [ 11%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp [ 13%] Building CXX object sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp [ 15%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp [ 15%] Building CXX object sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp [ 16%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] BUILDSTDERR: bool sedmlDeclared = false; BUILDSTDERR: ^~~~~~~~~~~~~ [ 17%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp [ 18%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python" -DVERSION="0.4.3" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/add_version.cmake BUILDSTDERR: Python: Add Version to generated file make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 18%] Built target binding_python_swig [ 19%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp [ 21%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp [ 22%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp [ 24%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp [ 26%] Building CXX object sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp [ 27%] Building CXX object sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp [ 27%] Building CXX object sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp [ 29%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp [ 30%] Building CXX object sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp [ 32%] Building CXX object sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp [ 33%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp [ 34%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp [ 35%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp [ 37%] Building CXX object sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp [ 37%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp [ 40%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp [ 41%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp [ 45%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp [ 46%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp [ 49%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp [ 51%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp [ 52%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 54%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp [ 54%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp [ 55%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp [ 57%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp [ 59%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 60%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp [ 62%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp [ 63%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp [ 65%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp [ 66%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp [ 68%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp [ 69%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp [ 69%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp [ 70%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp [ 70%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp [ 71%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp [ 72%] Building CXX object sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp [ 73%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp [ 74%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 75%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp [ 76%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libsedml.so.0 -o libsedml.so.0.4.3 CMakeFiles/sedml.dir/common/libsedml-version.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.0.4.3 libsedml.so.0 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 76%] Built target sedml [ 77%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp [ 78%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp [ 79%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp [ 79%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 80%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp [ 81%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp [ 82%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp [ 83%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp [ 84%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml-static.dir/SedBase.cpp.o CMakeFiles/sedml-static.dir/SedChange.cpp.o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o CMakeFiles/sedml-static.dir/SedCurve.cpp.o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o CMakeFiles/sedml-static.dir/SedDocument.cpp.o CMakeFiles/sedml-static.dir/SedError.cpp.o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml-static.dir/SedListOf.cpp.o CMakeFiles/sedml-static.dir/SedModel.cpp.o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o CMakeFiles/sedml-static.dir/SedOutput.cpp.o CMakeFiles/sedml-static.dir/SedParameter.cpp.o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o CMakeFiles/sedml-static.dir/SedRange.cpp.o CMakeFiles/sedml-static.dir/SedReader.cpp.o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml-static.dir/SedReport.cpp.o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o CMakeFiles/sedml-static.dir/SedSlice.cpp.o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o CMakeFiles/sedml-static.dir/SedSurface.cpp.o CMakeFiles/sedml-static.dir/SedTask.cpp.o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml-static.dir/SedVariable.cpp.o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o CMakeFiles/sedml-static.dir/SedWriter.cpp.o /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 84%] Built target sedml-static make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python 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examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build Scanning dependencies of target example_c_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 85%] Building C object examples/c/CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/echo_sedml.c [ 86%] Building C object examples/c/CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/create_sedml.c [ 86%] Building C object examples/c/CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/print_sedml.c Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 87%] Building CXX object bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig -I/usr/include/python3.6m -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp [ 88%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl [ 89%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_create_sedml.dir/link.txt --verbose=1 [ 90%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 90%] Built target example_c_print_sedml make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 90%] Built target example_c_create_sedml make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= [ 90%] Built target example_c_echo_sedml make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' Scanning dependencies of target example_cpp_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' Scanning dependencies of target example_cpp_print_sedml [ 91%] Building CXX object examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/echo_sedml.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 92%] Building CXX object examples/c++/CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/create_sedml.cpp [ 93%] Building CXX object examples/c++/CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/print_sedml.cpp [ 94%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl [ 95%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 95%] Built target example_cpp_echo_sedml make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/tests /builddir/build/BUILD/libSEDML-0.4.3/build2/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 96%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build2 -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestIssues.cpp [ 97%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 97%] Built target example_cpp_print_sedml [ 98%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build2/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build2 -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestRunner.cpp make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 98%] Built target example_cpp_create_sedml [ 99%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build2/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../sedml/libsedml-static.a -lcheck -lsbml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 99%] Built target test_sedml BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp: In instantiation of 'static Type swig::traits_as::as(PyObject*, bool) [with Type = SedError; PyObject = _object]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:4798:64: required from 'Type swig::as(PyObject*, bool) [with Type = SedError; PyObject = _object]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5437:20: required from 'swig::SwigPySequence_Ref::operator T() const [with T = SedError]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5803:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont; Seq = std::vector]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5825:12: required from 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector; T = SedError; PyObject = _object; swig::traits_asptr_stdseq::sequence = std::vector]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:5886:52: required from 'static int swig::traits_asptr >::asptr(PyObject*, std::vector**) [with T = SedError; PyObject = _object]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:4690:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector; PyObject = _object]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:18786:34: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:4773:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class SedError' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] BUILDSTDERR: memset(v_def,0,sizeof(Type)); BUILDSTDERR: ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedErrorLog.h:83, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedBase.h:154, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedVariable.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedTypes.h:44, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig/libsedml.h:31, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/libsedml_wrap.cpp:3776: BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedError.h:969:23: note: 'class SedError' declared here BUILDSTDERR: class LIBSEDML_EXTERN SedError : public XMLError BUILDSTDERR: ^~~~~~~~ [100%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lpython3.6m /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [100%] Built target binding_python_lib make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles 0 + popd ~/build/BUILD/libSEDML-0.4.3 + mkdir build ~/build/BUILD/libSEDML-0.4.3/build ~/build/BUILD/libSEDML-0.4.3 + pushd build + export 'LDFLAGS=-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' BUILDSTDERR: ++ echo '-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' BUILDSTDERR: ++ sed -e s/-Werror=format-security/-Wno-error=unused-value/g + SEDMLOPT_FLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export 'CFLAGS=-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export 'CXXFLAGS=-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CXXFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + CFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread' + export LDFLAGS + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python2 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python2.7 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython2.7.so -DWITH_JAVA:BOOL=ON -DWITH_SWIG:BOOL=ON -DWITH_PERL:BOOL=ON -DWITH_RUBY:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF -DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES .. -- The C compiler identification is GNU 8.1.1 -- The CXX compiler identification is GNU 8.1.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Looking for sbml-static -- Found LIBSBML: sbml-static -- Looking for numl-static -- Found LIBNUML: numl-static -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for sqrt in m -- Looking for sqrt in m - found -- Found SWIG: /usr/bin/swig (found version "3.0.12") -- Found JNI: /usr/lib/jvm/jre/lib/riscv64/libjawt.so -- Found Java: /usr/bin/java (found version "1.8.0.144") found components: Development -- Found PythonInterp: /usr/bin/python2 (found version "2.7.15") -- Found PythonLibs: /usr/lib64/libpython2.7.so (found version "2.7.15") -- Found Perl: /usr/bin/perl (found version "5.26.2") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.26.2") -- Found Ruby: /usr/bin/ruby (found version "2.5.1") -- ---------------------------------------------------------------------- libSEDML version 0.4.3 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 4.15.0-00044-g2b0aa1de45f6 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="0.4.3" -DPACKAGE_NAME="libsedml" CFLAGS = -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread SBML library configuration: SBML library = /usr/lib64/libsbml.so SBML include = -I/usr/include NUML library configuration: NUML library = /lib64/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig -- Using Java = /usr/bin/java -- Using Python = /usr/bin/python2 -- Using Perl = /usr/bin/perl -- Using Ruby = /usr/bin/ruby -- Using libcheck = /usr/lib64/libcheck.so -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done -- Generating done BUILDSTDERR: CMake Warning: BUILDSTDERR: Manually-specified variables were not used by the project: BUILDSTDERR: CMAKE_Fortran_FLAGS_RELEASE BUILDSTDERR: CMAKE_SKIP_INSTALL_RPATH BUILDSTDERR: CSHARP_COMPILER BUILDSTDERR: INCLUDE_INSTALL_DIR BUILDSTDERR: LIBSBML_STATIC BUILDSTDERR: LIB_INSTALL_DIR BUILDSTDERR: LIB_SUFFIX BUILDSTDERR: SHARE_INSTALL_PREFIX BUILDSTDERR: SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSEDML-0.4.3/build + make -j1 /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= Scanning dependencies of target sedml-static make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 0%] Building CXX object sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp [ 1%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp [ 2%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] BUILDSTDERR: bool sedmlDeclared = false; BUILDSTDERR: ^~~~~~~~~~~~~ [ 4%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp [ 5%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp [ 7%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp [ 8%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp [ 10%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp [ 11%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp [ 13%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp [ 15%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp [ 16%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp [ 18%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp [ 19%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp [ 21%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp [ 22%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp [ 24%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 26%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp [ 27%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 29%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp [ 30%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp [ 32%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp [ 33%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp [ 34%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp [ 34%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml-static.dir/SedBase.cpp.o CMakeFiles/sedml-static.dir/SedChange.cpp.o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o CMakeFiles/sedml-static.dir/SedCurve.cpp.o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o CMakeFiles/sedml-static.dir/SedDocument.cpp.o CMakeFiles/sedml-static.dir/SedError.cpp.o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml-static.dir/SedListOf.cpp.o CMakeFiles/sedml-static.dir/SedModel.cpp.o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o CMakeFiles/sedml-static.dir/SedOutput.cpp.o CMakeFiles/sedml-static.dir/SedParameter.cpp.o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o CMakeFiles/sedml-static.dir/SedRange.cpp.o CMakeFiles/sedml-static.dir/SedReader.cpp.o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml-static.dir/SedReport.cpp.o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o CMakeFiles/sedml-static.dir/SedSlice.cpp.o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o CMakeFiles/sedml-static.dir/SedSurface.cpp.o CMakeFiles/sedml-static.dir/SedTask.cpp.o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml-static.dir/SedVariable.cpp.o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o CMakeFiles/sedml-static.dir/SedWriter.cpp.o /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 34%] Built target sedml-static make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= Scanning dependencies of target sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 35%] Building CXX object sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/common/libsedml-version.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAddXML.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithm.cpp [ 37%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedAlgorithmParameter.cpp [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] BUILDSTDERR: bool sedmlDeclared = false; BUILDSTDERR: ^~~~~~~~~~~~~ [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChange.cpp [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeAttribute.cpp [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedChangeXML.cpp [ 41%] Building CXX object sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedComputeChange.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedConstructorException.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedCurve.cpp [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataDescription.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataGenerator.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSet.cpp [ 45%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDataSource.cpp [ 46%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedError.cpp [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedErrorLog.cpp [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedFunctionalRange.cpp [ 49%] Building CXX object sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedListOf.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedModel.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedNamespaces.cpp [ 51%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOneStep.cpp [ 52%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedOutput.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedParameter.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: bool assigned = false; BUILDSTDERR: ^~~~~~~~ [ 54%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedPlot3D.cpp [ 55%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRange.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReader.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRemoveXML.cpp [ 57%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedRepeatedTask.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedReport.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSetValue.cpp [ 59%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSimulation.cpp [ 60%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSteadyState.cpp [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSubTask.cpp [ 62%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedSurface.cpp [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: const string& name = stream.peek().getName(); BUILDSTDERR: ^~~~ [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedTypeCodes.cpp [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformRange.cpp [ 65%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedUniformTimeCourse.cpp [ 66%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVariable.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVectorRange.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedVisitor.cpp [ 68%] Building CXX object sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.3/sedml -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/sedml/SedWriter.cpp [ 69%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libsedml.so.0 -o libsedml.so.0.4.3 CMakeFiles/sedml.dir/common/libsedml-version.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl cd /builddir/build/BUILD/libSEDML-0.4.3/build/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.0.4.3 libsedml.so.0 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 69%] Built target sedml make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Swig Java source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/java-files/org/sedml/libsedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java -I/usr/include/ -I/usr/include/ -c++ -java -package org.sedml.libsedml -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -outdir /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/java-files/org/sedml/libsedml -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../swig/libsedml.i BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Built target binding_java_swig make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Building CXX object bindings/java/CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_java_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/java/../swig -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/libsedml_wrap.cpp [ 71%] Linking CXX shared library libsedmlj.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_java_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libsedmlj.so -o libsedmlj.so CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 72%] Built target binding_java_lib make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_jar make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 72%] Building: libsedml.jar cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/test cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java && /usr/bin/cmake -DJava_JAVAC_EXECUTABLE="/usr/bin/javac" -DJava_JAR_EXECUTABLE="/usr/bin/jar" -DBIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java" -DSRC_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/bindings/java" -DFILE_SEP=":" -DPATH_SEP=/ -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/java/compile-native-files.cmake BUILDSTDERR: Creating: libsedml.jar BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings added manifest adding: org/sedml/libsedml/ASTNode.class(in = 16585) (out= 4861)(deflated 70%) adding: org/sedml/libsedml/ASTNodeList.class(in = 1542) (out= 711)(deflated 53%) adding: org/sedml/libsedml/AtomicDescription.class(in = 2776) (out= 1078)(deflated 61%) adding: org/sedml/libsedml/AtomicValue.class(in = 2512) (out= 1047)(deflated 58%) adding: org/sedml/libsedml/CVTerm.class(in = 4674) (out= 1650)(deflated 64%) adding: org/sedml/libsedml/CVTermList.class(in = 1524) (out= 711)(deflated 53%) adding: org/sedml/libsedml/CompositeDescription.class(in = 4937) (out= 1542)(deflated 68%) adding: org/sedml/libsedml/CompositeValue.class(in = 5054) (out= 1641)(deflated 67%) adding: org/sedml/libsedml/Date.class(in = 4765) (out= 1770)(deflated 62%) adding: org/sedml/libsedml/DateList.class(in = 1488) (out= 708)(deflated 52%) adding: org/sedml/libsedml/Dimension.class(in = 3157) (out= 1211)(deflated 61%) adding: org/sedml/libsedml/DimensionDescription.class(in = 3942) (out= 1334)(deflated 66%) adding: org/sedml/libsedml/DoubleStdVector.class(in = 2036) (out= 867)(deflated 57%) adding: org/sedml/libsedml/L3ParserSettings.class(in = 5557) (out= 1722)(deflated 69%) adding: org/sedml/libsedml/MathML.class(in = 1254) (out= 661)(deflated 47%) adding: org/sedml/libsedml/Model.class(in = 37513) (out= 9488)(deflated 74%) adding: org/sedml/libsedml/ModelCreatorList.class(in = 1641) (out= 724)(deflated 55%) adding: org/sedml/libsedml/NMBase.class(in = 8128) (out= 2445)(deflated 69%) adding: org/sedml/libsedml/NUMLConstructorException.class(in = 907) (out= 533)(deflated 41%) adding: org/sedml/libsedml/NUMLDocument.class(in = 5377) (out= 1842)(deflated 65%) adding: org/sedml/libsedml/NUMLError.class(in = 2275) (out= 973)(deflated 57%) adding: org/sedml/libsedml/NUMLErrorLog.class(in = 3518) (out= 1258)(deflated 64%) adding: org/sedml/libsedml/NUMLList.class(in = 3371) (out= 1277)(deflated 62%) adding: org/sedml/libsedml/NUMLNamespaces.class(in = 2601) (out= 1042)(deflated 59%) adding: org/sedml/libsedml/NUMLReader.class(in = 1654) (out= 797)(deflated 51%) adding: org/sedml/libsedml/NUMLWriter.class(in = 2479) (out= 999)(deflated 59%) adding: org/sedml/libsedml/OFStream.class(in = 1712) (out= 794)(deflated 53%) adding: org/sedml/libsedml/ONTOLOGY.class(in = 1578) (out= 742)(deflated 52%) adding: org/sedml/libsedml/OStream.class(in = 1404) (out= 751)(deflated 46%) adding: org/sedml/libsedml/OStringStream.class(in = 1247) (out= 646)(deflated 48%) adding: org/sedml/libsedml/OntologyTerm.class(in = 3203) (out= 1183)(deflated 63%) adding: org/sedml/libsedml/OntologyTerms.class(in = 2231) (out= 942)(deflated 57%) adding: org/sedml/libsedml/ResultComponent.class(in = 5580) (out= 1760)(deflated 68%) adding: org/sedml/libsedml/ResultComponents.class(in = 2478) (out= 984)(deflated 60%) adding: org/sedml/libsedml/SBMLNamespaces.class(in = 5735) (out= 1810)(deflated 68%) adding: org/sedml/libsedml/SBase.class(in = 20643) (out= 5618)(deflated 72%) adding: org/sedml/libsedml/SBaseList.class(in = 1506) (out= 710)(deflated 52%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTBasePlugin.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTNodeType_t.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AlgebraicRule.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AssignmentRule.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Compartment.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_CompartmentType.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Constraint.class(in = 454) (out= 297)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Delay.class(in = 439) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ElementFilter.class(in = 463) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Event.class(in = 439) (out= 291)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_EventAssignment.class(in = 469) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_FormulaUnitsData.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_FunctionDefinition.class(in = 478) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_IdList.class(in = 442) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_IdentifierTransformer.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_InitialAssignment.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_KineticLaw.class(in = 454) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_L3ParserSettings_t.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_List.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartmentTypes.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartments.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfConstraints.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfEvents.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfFunctionDefinitions.class(in = 499) (out= 308)(deflated 38%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfInitialAssignments.class(in = 496) (out= 308)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfParameters.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfReactions.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfRules.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpecies.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpeciesTypes.class(in = 478) (out= 305)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfUnitDefinitions.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_LocalParameter.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelCreator.class(in = 460) (out= 297)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelHistory.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Model_t.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ModifierSpeciesReference.class(in = 496) (out= 309)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_NUMLDocument_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Parameter.class(in = 451) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_RateRule.class(in = 448) (out= 296)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_Reaction.class(in = 448) (out= 295)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Rule.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLDocument.class(in = 460) (out= 300)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLNamespaces_t.class(in = 472) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_SBasePlugin.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Species.class(in = 445) (out= 293)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesReference.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesType.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_StringBuffer_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Trigger.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Unit.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_UnitDefinition.class(in = 466) (out= 298)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_XMLNamespaces_t.class(in = 469) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_NUMLError_t.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_SedError_t.class(in = 487) (out= 306)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_std__ostream.class(in = 460) (out= 298)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_void.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SedAddXML.class(in = 3052) (out= 1178)(deflated 61%) adding: org/sedml/libsedml/SedAlgorithm.class(in = 5218) (out= 1678)(deflated 67%) adding: org/sedml/libsedml/SedAlgorithmParameter.class(in = 3901) (out= 1324)(deflated 66%) adding: org/sedml/libsedml/SedBase.class(in = 11106) (out= 3182)(deflated 71%) adding: org/sedml/libsedml/SedBaseList.class(in = 1542) (out= 711)(deflated 53%) adding: org/sedml/libsedml/SedChange.class(in = 2976) (out= 1161)(deflated 60%) adding: org/sedml/libsedml/SedChangeAttribute.class(in = 3139) (out= 1144)(deflated 63%) adding: org/sedml/libsedml/SedChangeXML.class(in = 3130) (out= 1182)(deflated 62%) adding: org/sedml/libsedml/SedComputeChange.class(in = 6494) (out= 1979)(deflated 69%) adding: org/sedml/libsedml/SedConstructorException.class(in = 1814) (out= 799)(deflated 55%) adding: org/sedml/libsedml/SedCurve.class(in = 6857) (out= 2128)(deflated 68%) adding: org/sedml/libsedml/SedDataDescription.class(in = 7186) (out= 2093)(deflated 70%) adding: org/sedml/libsedml/SedDataGenerator.class(in = 7332) (out= 2184)(deflated 70%) adding: org/sedml/libsedml/SedDataSet.class(in = 4044) (out= 1428)(deflated 64%) adding: org/sedml/libsedml/SedDataSource.class(in = 5443) (out= 1774)(deflated 67%) adding: org/sedml/libsedml/SedDocument.class(in = 13881) (out= 3844)(deflated 72%) adding: org/sedml/libsedml/SedError.class(in = 2506) (out= 984)(deflated 60%) adding: org/sedml/libsedml/SedErrorLog.class(in = 6205) (out= 1819)(deflated 70%) adding: org/sedml/libsedml/SedErrorStdVector.class(in = 2319) (out= 928)(deflated 59%) adding: org/sedml/libsedml/SedFunctionalRange.class(in = 7080) (out= 2103)(deflated 70%) adding: org/sedml/libsedml/SedListOf.class(in = 4476) (out= 1567)(deflated 64%) adding: org/sedml/libsedml/SedListOfAlgorithmParameters.class(in = 3747) (out= 1228)(deflated 67%) adding: org/sedml/libsedml/SedListOfChanges.class(in = 4289) (out= 1499)(deflated 65%) adding: org/sedml/libsedml/SedListOfCurves.class(in = 3253) (out= 1198)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataDescriptions.class(in = 3633) (out= 1219)(deflated 66%) adding: org/sedml/libsedml/SedListOfDataGenerators.class(in = 3557) (out= 1215)(deflated 65%) adding: org/sedml/libsedml/SedListOfDataSets.class(in = 3329) (out= 1205)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataSources.class(in = 3443) (out= 1207)(deflated 64%) adding: org/sedml/libsedml/SedListOfFunctionalRanges.class(in = 3633) (out= 1217)(deflated 66%) adding: org/sedml/libsedml/SedListOfModels.class(in = 3253) (out= 1198)(deflated 63%) adding: org/sedml/libsedml/SedListOfOutputs.class(in = 3797) (out= 1372)(deflated 63%) adding: org/sedml/libsedml/SedListOfParameters.class(in = 3405) (out= 1207)(deflated 64%) adding: org/sedml/libsedml/SedListOfRanges.class(in = 3824) (out= 1375)(deflated 64%) adding: org/sedml/libsedml/SedListOfSimulations.class(in = 3997) (out= 1391)(deflated 65%) adding: org/sedml/libsedml/SedListOfSlices.class(in = 3253) (out= 1198)(deflated 63%) adding: org/sedml/libsedml/SedListOfSubTasks.class(in = 3329) (out= 1204)(deflated 63%) adding: org/sedml/libsedml/SedListOfSurfaces.class(in = 3329) (out= 1204)(deflated 63%) adding: org/sedml/libsedml/SedListOfTaskChanges.class(in = 3419) (out= 1206)(deflated 64%) adding: org/sedml/libsedml/SedListOfTasks.class(in = 3475) (out= 1291)(deflated 62%) adding: org/sedml/libsedml/SedListOfVariables.class(in = 3367) (out= 1199)(deflated 64%) adding: org/sedml/libsedml/SedModel.class(in = 6561) (out= 2170)(deflated 66%) adding: org/sedml/libsedml/SedNamespaces.class(in = 3807) (out= 1366)(deflated 64%) adding: org/sedml/libsedml/SedNamespacesList.class(in = 1650) (out= 719)(deflated 56%) adding: org/sedml/libsedml/SedOneStep.class(in = 2913) (out= 1158)(deflated 60%) adding: org/sedml/libsedml/SedOutput.class(in = 3554) (out= 1327)(deflated 62%) adding: org/sedml/libsedml/SedParameter.class(in = 3773) (out= 1365)(deflated 63%) adding: org/sedml/libsedml/SedPlot2D.class(in = 4846) (out= 1673)(deflated 65%) adding: org/sedml/libsedml/SedPlot3D.class(in = 4133) (out= 1471)(deflated 64%) adding: org/sedml/libsedml/SedRange.class(in = 2914) (out= 1154)(deflated 60%) adding: org/sedml/libsedml/SedReader.class(in = 1647) (out= 793)(deflated 51%) adding: org/sedml/libsedml/SedRemoveXML.class(in = 2500) (out= 1034)(deflated 58%) adding: org/sedml/libsedml/SedRepeatedTask.class(in = 8699) (out= 2552)(deflated 70%) adding: org/sedml/libsedml/SedReport.class(in = 4133) (out= 1471)(deflated 64%) adding: org/sedml/libsedml/SedSetValue.class(in = 7908) (out= 2374)(deflated 69%) adding: org/sedml/libsedml/SedSimulation.class(in = 4505) (out= 1549)(deflated 65%) adding: org/sedml/libsedml/SedSlice.class(in = 3496) (out= 1310)(deflated 62%) adding: org/sedml/libsedml/SedSteadyState.class(in = 2546) (out= 1037)(deflated 59%) adding: org/sedml/libsedml/SedSubTask.class(in = 3312) (out= 1250)(deflated 62%) adding: org/sedml/libsedml/SedSurface.class(in = 3385) (out= 1269)(deflated 62%) adding: org/sedml/libsedml/SedTask.class(in = 4382) (out= 1521)(deflated 65%) adding: org/sedml/libsedml/SedUniformRange.class(in = 4402) (out= 1490)(deflated 66%) adding: org/sedml/libsedml/SedUniformTimeCourse.class(in = 4738) (out= 1505)(deflated 68%) adding: org/sedml/libsedml/SedVariable.class(in = 4916) (out= 1599)(deflated 67%) adding: org/sedml/libsedml/SedVectorRange.class(in = 3456) (out= 1279)(deflated 62%) adding: org/sedml/libsedml/SedWriter.class(in = 2686) (out= 1052)(deflated 60%) adding: org/sedml/libsedml/Tuple.class(in = 3012) (out= 1199)(deflated 60%) adding: org/sedml/libsedml/TupleDescription.class(in = 3597) (out= 1292)(deflated 64%) adding: org/sedml/libsedml/XMLAttributes.class(in = 6722) (out= 1883)(deflated 71%) adding: org/sedml/libsedml/XMLConstructorException.class(in = 1109) (out= 615)(deflated 44%) adding: org/sedml/libsedml/XMLError.class(in = 4368) (out= 1614)(deflated 63%) adding: org/sedml/libsedml/XMLErrorLog.class(in = 4236) (out= 1500)(deflated 64%) adding: org/sedml/libsedml/XMLInputStream.class(in = 4641) (out= 1513)(deflated 67%) adding: org/sedml/libsedml/XMLNamespaces.class(in = 4087) (out= 1399)(deflated 65%) adding: org/sedml/libsedml/XMLNode.class(in = 8076) (out= 2346)(deflated 70%) adding: org/sedml/libsedml/XMLOutputStream.class(in = 9090) (out= 2467)(deflated 72%) adding: org/sedml/libsedml/XMLOwningOutputFileStream.class(in = 1951) (out= 759)(deflated 61%) adding: org/sedml/libsedml/XMLOwningOutputStringStream.class(in = 1659) (out= 707)(deflated 57%) adding: org/sedml/libsedml/XMLToken.class(in = 12891) (out= 3305)(deflated 74%) adding: org/sedml/libsedml/XMLTriple.class(in = 2398) (out= 1033)(deflated 56%) adding: org/sedml/libsedml/XmlErrorStdVector.class(in = 2335) (out= 949)(deflated 59%) adding: org/sedml/libsedml/libsedml.class(in = 11526) (out= 3901)(deflated 66%) adding: org/sedml/libsedml/libsedmlConstants.class(in = 35707) (out= 11367)(deflated 68%) adding: org/sedml/libsedml/libsedmlJNI.class(in = 164369) (out= 32936)(deflated 79%) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 73%] Built target binding_java_jar make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Swig Python source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/libsedml.i BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python" -DVERSION="0.4.3" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/add_version.cmake BUILDSTDERR: Python: Add Version to generated file make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Built target binding_python_swig make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Building CXX object bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig -I/usr/include/python2.7 -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp: In instantiation of 'static Type swig::traits_as::as(PyObject*, bool) [with Type = SedError; PyObject = _object]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:4798:64: required from 'Type swig::as(PyObject*, bool) [with Type = SedError; PyObject = _object]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:5437:20: required from 'swig::SwigPySequence_Ref::operator T() const [with T = SedError]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:5803:30: required from 'void swig::assign(const SwigPySeq&, Seq*) [with SwigPySeq = swig::SwigPySequence_Cont; Seq = std::vector]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:5825:12: required from 'static int swig::traits_asptr_stdseq::asptr(PyObject*, swig::traits_asptr_stdseq::sequence**) [with Seq = std::vector; T = SedError; PyObject = _object; swig::traits_asptr_stdseq::sequence = std::vector]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:5886:52: required from 'static int swig::traits_asptr >::asptr(PyObject*, std::vector**) [with T = SedError; PyObject = _object]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:4690:37: required from 'int swig::asptr(PyObject*, Type**) [with Type = std::vector; PyObject = _object]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:18786:34: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:4773:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class SedError' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] BUILDSTDERR: memset(v_def,0,sizeof(Type)); BUILDSTDERR: ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedErrorLog.h:83, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedBase.h:154, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedVariable.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedTypes.h:44, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../swig/libsedml.h:31, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/libsedml_wrap.cpp:3776: BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/python/../../sedml/SedError.h:969:23: note: 'class SedError' declared here BUILDSTDERR: class LIBSEDML_EXTERN SedError : public XMLError BUILDSTDERR: ^~~~~~~~ [ 75%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lpython2.7 /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 76%] Built target binding_python_lib make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Built target binding_perl_swig make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 78%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. [ 78%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML.cpp [ 79%] Linking CXX shared module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 79%] Built target binding_perl_lib make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 80%] Swig Ruby source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby -I/usr/include/ -I/usr/include/ -c++ -ruby -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/libsedml.i BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 80%] Built target binding_ruby_swig make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 81%] Building CXX object bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__slice(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4795:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__delete_at(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4841:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch (std::out_of_range) BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__at(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4851:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_0(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4873:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_1(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4882:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5270:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__delete_at(std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5316:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch (std::out_of_range) BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__at(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5326:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5348:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5357:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_double_Sg__insert__SWIG_0(std::vector*, std::vector::difference_type, int, VALUE*, ...)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5497:19: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] BUILDSTDERR: catch( std::invalid_argument ) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_double_Sg__unshift(std::vector*, int, VALUE*, ...)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5517:16: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] BUILDSTDERR: catch( std::invalid_argument ) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5652:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__delete_at(std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5698:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch (std::out_of_range) BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__at(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5708:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5730:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5739:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_XMLError_Sm__Sg__insert__SWIG_0(std::vector*, std::vector::difference_type, int, VALUE*, ...)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5863:19: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] BUILDSTDERR: catch( std::invalid_argument ) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_XMLError_Sm__Sg__unshift(std::vector*, int, VALUE*, ...)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5883:16: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] BUILDSTDERR: catch( std::invalid_argument ) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5980:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__delete_at(std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6026:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch (std::out_of_range) BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__at(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6036:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6058:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6067:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: catch( std::out_of_range ) { BUILDSTDERR: ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_SedError_Sg__insert__SWIG_0(std::vector*, std::vector::difference_type, int, VALUE*, ...)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6191:19: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] BUILDSTDERR: catch( std::invalid_argument ) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'std::vector* std_vector_Sl_SedError_Sg__unshift(std::vector*, int, VALUE*, ...)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6211:16: warning: catching polymorphic type 'class std::invalid_argument' by value [-Wcatch-value=] BUILDSTDERR: catch( std::invalid_argument ) BUILDSTDERR: ^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4793:127: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:4916:131: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5268:100: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5391:104: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5650:107: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5773:111: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5978:104: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6101:108: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3813:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'static Type swig::traits_as::as(VALUE, bool) [with Type = SedError; VALUE = long unsigned int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3498:68: required from 'Type swig::as(VALUE, bool) [with Type = SedError; VALUE = long unsigned int]' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:6174:156: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3472:8: warning: 'void* memset(void*, int, size_t)' clearing an object of type 'class SedError' with no trivial copy-assignment; use assignment or value-initialization instead [-Wclass-memaccess] BUILDSTDERR: memset(v_def,0,sizeof(Type)); BUILDSTDERR: ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: In file included from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedErrorLog.h:83, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedBase.h:154, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedVariable.h:51, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedTypes.h:44, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../swig/libsedml.h:31, BUILDSTDERR: from /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2440: BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby/../../sedml/SedError.h:969:23: note: 'class SedError' declared here BUILDSTDERR: class LIBSEDML_EXTERN SedError : public XMLError BUILDSTDERR: ^~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_matchesSedNamespaces(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:25021:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_matchesRequiredSedNamespacesForAddition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:25134:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesSBMLNamespaces(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:93253:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesRequiredSBMLNamespacesForAddition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:93366:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NUMLErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:137312:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ASTNode_setType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5461:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:84635:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Iterator___sub__(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3209:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: res = SWIG_AsVal_long (obj, val ? &v : 0); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:8779:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ConstIterator___sub__(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:3209:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: res = SWIG_AsVal_long (obj, val ? &v : 0); BUILDSTDERR: ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:8196:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_TupleDescription_getAtomicDescription(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:135661:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CompositeDescription_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:135126:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Tuple_getAtomicValue(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:133883:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CompositeValue_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:133315:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NUMLList_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:127506:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getNestedCVTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:108069:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getConstraint(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100057:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getDisabledPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:92202:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedErrorLog_getNumFailsWithSeverity(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:29267:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOf_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:32117:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getResourceURI(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:107453:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_DimensionDescription_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:132694:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_DimensionDescription_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:132388:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Dimension_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131902:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Dimension_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131722:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ResultComponents_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131204:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ResultComponents_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:131024:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_OntologyTerms_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:129031:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_OntologyTerms_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:128851:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:127002:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:126697:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:126449:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:126330:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNode_getChild(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:118233:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLToken_getNamespacePrefix(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:116005:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLToken_removeNamespace(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:115759:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_getPrefix(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:112593:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:112290:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setBiologicalQualifierType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:107757:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setModelQualifierType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:107669:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeEvent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104959:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeReaction(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104839:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104648:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeInitialAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104528:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104408:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104288:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104168:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:104048:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartmentType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:103928:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeUnitDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:103808:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeFunctionDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:103688:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getEvent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100721:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getModifierSpeciesReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100560:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100435:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getReaction(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:100250:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99974:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99849:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99724:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99599:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99474:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99289:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignmentBySymbol(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:99128:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98982:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98722:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98501:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98280:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:98059:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartmentType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:97838:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getUnitDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:97617:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getFunctionDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:97396:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:96191:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:96072:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:92059:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_setSBOTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90976:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90745:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90440:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:90116:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:89997:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementByMetaId(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:87779:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementBySId(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:87654:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ASTNode_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:85951:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeOutput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:80344:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getOutput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:80032:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeDataGenerator(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79839:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getDataGenerator(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79579:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79394:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:79104:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeModel(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78911:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getModel(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78651:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeSimulation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78466:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getSimulation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:78154:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeDataDescription(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:77961:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getDataDescription(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:77701:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeSubTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76907:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getSubTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76647:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeTaskChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76462:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getTaskChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76202:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeRange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:76017:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getRange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:75705:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTasks_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:74963:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTasks_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:74673:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTaskChanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:72552:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTaskChanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:72292:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71775:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71515:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71330:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:71070:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSubTasks_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:70003:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSubTasks_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:69743:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfFunctionalRanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:68722:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfFunctionalRanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:68462:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67945:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67685:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67500:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:67240:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfRanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:65141:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfRanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:64829:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataGenerators_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:63902:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataGenerators_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:63642:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:63125:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:62865:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:62680:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:62420:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot3D_removeSurface(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:61508:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot3D_getSurface(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:61248:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot2D_removeCurve(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:60662:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot2D_getCurve(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:60402:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedReport_removeDataSet(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:59608:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedReport_getDataSet(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:59348:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfOutputs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:58829:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfOutputs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:58517:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSurfaces_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:57434:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSurfaces_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:57174:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfCurves_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:56153:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfCurves_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:55893:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSets_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:53887:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSets_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:53627:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSources_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:52377:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSources_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:52117:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataSource_removeSlice(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:51600:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataSource_getSlice(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:51340:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataDescriptions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:50488:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataDescriptions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:50228:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataDescription_removeDataSource(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:49711:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataDescription_getDataSource(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:49451:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSlices_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:48360:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSlices_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:48100:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSimulations_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:46255:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSimulations_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:45943:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfAlgorithmParameters_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:44669:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfAlgorithmParameters_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:44409:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithmParameter_setKisaoID(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:44038:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_removeAlgorithmParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:43104:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_getAlgorithmParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:42844:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_setKisaoID(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:43355:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfModels_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:42214:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfModels_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:41954:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedModel_removeChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:41437:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedModel_getChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:41077:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:40039:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:39779:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:39594:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:39334:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfChanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:36968:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfChanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:36608:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfParameters_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:35681:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfParameters_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:35421:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfVariables_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:34289:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfVariables_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:2497:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:34029:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:24251:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:23946:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:23698:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:23579:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:5075:28: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: if (rb_obj_is_kind_of(obj, rb_cArray) == Qtrue) { BUILDSTDERR: ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:28658:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:1374:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/libsedml_wrap.cpp:31489:9: note: 'argv[1]' was declared here BUILDSTDERR: VALUE argv[3]; BUILDSTDERR: ^~~~ [ 81%] Linking CXX shared library libSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_ruby_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libSEDML.so -o libSEDML.so CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lruby /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 82%] Built target binding_ruby_lib make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 83%] Swig R source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r -I/usr/include/ -I/usr/include/ -c++ -r -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/libsedml.i BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a R keyword, renaming to '_next' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 83%] Built target binding_r_swig make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 83%] Building CXX object bindings/r/CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_r_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/r/../swig -I/usr/include/R -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp: In function 'int _p_f_p_q_const__ASTNode__int(const ASTNode_t*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp:58243:14: warning: unused variable 'arg1' [-Wunused-variable] BUILDSTDERR: ASTNode_t *arg1 = (ASTNode_t *) 0 ; BUILDSTDERR: ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libsedml_wrap.cpp:58249:7: warning: unused variable 'ecode' [-Wunused-variable] BUILDSTDERR: int ecode = 0; BUILDSTDERR: ^~~~~ [ 84%] Linking CXX shared library libSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_r_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -Wl,-soname,libSEDML.so -o libSEDML.so CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o -L/usr/lib64/R/lib ../../sedml/libsedml-static.a -lR /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 85%] Built target binding_r_lib make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_package make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 86%] Create R Package (64bit) cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/patch-swig-file.cmake BUILDSTDERR: DONE cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.so /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/inst/libs cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/R cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/R CMD INSTALL --build --no-libs --no-test-load --no-clean-on-error --no-multiarch libSEDML -l temp BUILDSTDERR: * installing *source* package 'libSEDML' ... BUILDSTDERR: ** R BUILDSTDERR: ** inst BUILDSTDERR: ** byte-compile and prepare package for lazy loading Note: possible error in 'cerr_get(.copy)': unused argument (.copy) Note: possible error in 'clog_get(.copy)': unused argument (.copy) Note: possible error in 'cout_get(.copy)': unused argument (.copy) BUILDSTDERR: ** help No man pages found in package 'libSEDML' BUILDSTDERR: *** installing help indices BUILDSTDERR: ** building package indices BUILDSTDERR: * creating tarball BUILDSTDERR: packaged installation of 'libSEDML' as 'libSEDML_0.4.3_R_riscv64-koji-linux-gnu.tar.gz' BUILDSTDERR: * DONE (libSEDML) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 86%] Built target binding_r_package make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 87%] Building C object examples/c/CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/print_sedml.c [ 88%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 88%] Built target example_c_print_sedml make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 88%] Building C object examples/c/CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/echo_sedml.c [ 89%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 89%] Built target example_c_echo_sedml make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 90%] Building C object examples/c/CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c/create_sedml.c [ 91%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 91%] Built target example_c_create_sedml make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 92%] Building CXX object examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/echo_sedml.cpp [ 93%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 93%] Built target example_cpp_echo_sedml make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 93%] Building CXX object examples/c++/CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/create_sedml.cpp [ 94%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 94%] Built target example_cpp_create_sedml make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 94%] Building CXX object examples/c++/CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.3/examples/c++/../../include -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/examples/c++/print_sedml.cpp [ 95%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target example_cpp_print_sedml make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Build java example echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/examples/java/echo_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target example_java_echo_sedml make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 96%] Build java example create_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/examples/java/create_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 96%] Built target example_java_create_sedml make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 97%] Build java example print_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/examples/java/print_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 97%] Built target example_java_print_sedml make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/tests /builddir/build/BUILD/libSEDML-0.4.3/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 98%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestIssues.cpp [ 99%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.3/build/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.3/build -I/builddir/build/BUILD/libSEDML-0.4.3/tests/.. -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/tests/TestRunner.cpp [100%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libSEDML-0.4.3/build/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -rdynamic CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../sedml/libsedml-static.a -lcheck -lsbml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles 0 + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.1kq9cA + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 + cd libSEDML-0.4.3 + make -C build DESTDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 install make: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 34%] Built target sedml-static make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/sedml /builddir/build/BUILD/libSEDML-0.4.3/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 69%] Built target sedml make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 70%] Built target binding_java_swig make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 72%] Built target binding_java_lib make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_jar.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 73%] Built target binding_java_jar make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 74%] Built target binding_python_swig make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 76%] Built target binding_python_lib make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 77%] Built target binding_perl_swig make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 78%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/libsedml.i BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. [ 78%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.3\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.3/bindings/perl/../swig -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl/LibSEDML.cpp [ 79%] Linking CXX shared module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Wno-error=unused-value -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z,now -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 79%] Built target binding_perl_lib make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 80%] Built target binding_ruby_swig make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 82%] Built target binding_ruby_lib make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/r/CMakeFiles/binding_r_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 83%] Built target binding_r_swig make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'bindings/r/CMakeFiles/binding_r_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 85%] Built target binding_r_lib make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 86%] Create R Package (64bit) cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R" -P /builddir/build/BUILD/libSEDML-0.4.3/bindings/r/patch-swig-file.cmake BUILDSTDERR: DONE cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.so /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/inst/libs cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML.R /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r/libSEDML/R cd /builddir/build/BUILD/libSEDML-0.4.3/build/bindings/r && /usr/bin/R CMD INSTALL --build --no-libs --no-test-load --no-clean-on-error --no-multiarch libSEDML -l temp BUILDSTDERR: * installing *source* package 'libSEDML' ... BUILDSTDERR: ** R BUILDSTDERR: ** inst BUILDSTDERR: ** byte-compile and prepare package for lazy loading Note: possible error in 'cerr_get(.copy)': unused argument (.copy) Note: possible error in 'clog_get(.copy)': unused argument (.copy) Note: possible error in 'cout_get(.copy)': unused argument (.copy) BUILDSTDERR: ** help No man pages found in package 'libSEDML' BUILDSTDERR: *** installing help indices BUILDSTDERR: ** building package indices BUILDSTDERR: * creating tarball BUILDSTDERR: packaged installation of 'libSEDML' as 'libSEDML_0.4.3_R_riscv64-koji-linux-gnu.tar.gz' BUILDSTDERR: * DONE (libSEDML) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 86%] Built target binding_r_package make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 88%] Built target example_c_print_sedml make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 89%] Built target example_c_echo_sedml make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 91%] Built target example_c_create_sedml make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 93%] Built target example_cpp_echo_sedml make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 94%] Built target example_cpp_create_sedml make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target example_cpp_print_sedml make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 95%] Built target example_java_echo_sedml make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 96%] Built target example_java_create_sedml make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java /builddir/build/BUILD/libSEDML-0.4.3/build/examples/java/CMakeFiles/example_java_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [ 97%] Built target example_java_print_sedml make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' cd /builddir/build/BUILD/libSEDML-0.4.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build /builddir/build/BUILD/libSEDML-0.4.3/build/tests /builddir/build/BUILD/libSEDML-0.4.3/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/common.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/extern.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-config.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/operationReturnValues.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/sedmlfwd.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedAddXML.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedAlgorithm.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedAlgorithmParameter.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedBase.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedChange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedChangeAttribute.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedChangeXML.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedComputeChange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedConstructorException.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedCurve.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedDataDescription.h -- Installing: 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/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-version.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-config-common.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-namespace.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-package.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so.0.4.3 -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so.0 -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml-static.a -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-static-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-static-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-static-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml/libsedmlj.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/java/libsedmlj.jar -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python2.7/site-packages/libsedml/_libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python2.7/site-packages/libsedml.pth -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python2.7/site-packages/libsedml/libsedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/perl5/vendor_perl/LibSEDML.pm -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/perl5/vendor_perl/auto/libSEDML/LibSEDML.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/ruby/vendor_ruby/libSEDML.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libSEDML.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/create_sedml.c -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/echo_sedml.c -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/print_sedml.c -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/create_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/echo_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/print_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/java/create_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/java/echo_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/java/print_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/java/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/create_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/create_sedml2.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/echo_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/print_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/README.md make: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build' + make -C build2 DESTDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 install make: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/cmake -H/builddir/build/BUILD/libSEDML-0.4.3 -B/builddir/build/BUILD/libSEDML-0.4.3/build2 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 42%] Built target sedml-static make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml /builddir/build/BUILD/libSEDML-0.4.3/build2/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 83%] Built target sedml make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 84%] Built target binding_python_swig make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python /builddir/build/BUILD/libSEDML-0.4.3/build2/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 86%] Built target binding_python_lib make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 87%] Built target example_c_print_sedml make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 89%] Built target example_c_echo_sedml make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 91%] Built target example_c_create_sedml make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 93%] Built target example_cpp_echo_sedml make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 95%] Built target example_cpp_create_sedml make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++ /builddir/build/BUILD/libSEDML-0.4.3/build2/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [ 97%] Built target example_cpp_print_sedml make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' cd /builddir/build/BUILD/libSEDML-0.4.3/build2 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.3 /builddir/build/BUILD/libSEDML-0.4.3/tests /builddir/build/BUILD/libSEDML-0.4.3/build2 /builddir/build/BUILD/libSEDML-0.4.3/build2/tests /builddir/build/BUILD/libSEDML-0.4.3/build2/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.3/build2/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/common.h -- 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/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedChangeAttribute.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedChangeXML.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedComputeChange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedConstructorException.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedCurve.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedDataDescription.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedDataGenerator.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedDataSet.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedDataSource.h -- Up-to-date: 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/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedUniformRange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedUniformTimeCourse.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedVariable.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedVectorRange.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedVisitor.h -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/SedWriter.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-version.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-config-common.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-namespace.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/include/sedml/common/libsedml-package.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so.0.4.3 -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so.0 -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml-static.a -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-static-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-static-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/cmake/sedml-static-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python3.6/site-packages/libsedml/_libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python3.6/site-packages/libsedml.pth -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python3.6/site-packages/libsedml/libsedml.py -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/README.md -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/create_sedml.c -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/echo_sedml.c -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/print_sedml.c -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c/README.md -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/README.md -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/create_sedml.cpp -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/echo_sedml.cpp -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/c++/print_sedml.cpp -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/create_sedml.py -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/create_sedml2.py -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/echo_sedml.py -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/print_sedml.py -- Up-to-date: /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/README.md make: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.3/build2' + mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml + mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/R/library build/bindings/r/libSEDML_0.4.3_R_riscv64-koji-linux-gnu.tar.gz BUILDSTDERR: * installing *binary* package 'libSEDML' ... BUILDSTDERR: * DONE (libSEDML) + test -d SEDML/src + rm -rf /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/R/library/SEDML/R.css + ln -sf /usr/lib64/libSEDML.so /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/R/library/libSEDML/libs/libSEDML.so + find /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 -name '*.la' -delete + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 0.4.3-10.fc29 --unique-debug-suffix -0.4.3-10.fc29.riscv64 --unique-debug-src-base libsedml-0.4.3-10.fc29.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libSEDML-0.4.3 extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python3.6/site-packages/libsedml/_libsedml.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python2.7/site-packages/libsedml/_libsedml.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/ruby/vendor_ruby/libSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml/libsedmlj.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/libsedml.so.0.4.3 extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/perl5/vendor_perl/auto/libSEDML/LibSEDML.so /usr/lib/rpm/sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. BUILDSTDERR: 56552 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig BUILDSTDERR: /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib/debug/usr/lib64/python2.7 using /usr/bin/python2.7 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib/debug/usr/lib64/python3.6 using /usr/bin/python3.6 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python2.7 using /usr/bin/python2.7 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/lib64/python3.6 using /usr/bin/python3.6 /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/print_sedml.py /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/echo_sedml.py /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/create_sedml.py /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/libsedml/examples/python/create_sedml2.py BUILDSTDERR: DEPRECATION WARNING: python2 invoked with /usr/bin/python. BUILDSTDERR: Use /usr/bin/python3 or /usr/bin/python2 BUILDSTDERR: /usr/bin/python will be removed or switched to Python 3 in the future. BUILDSTDERR: If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out BUILDSTDERR: DEPRECATION WARNING: python2 invoked with /usr/bin/python. BUILDSTDERR: Use /usr/bin/python3 or /usr/bin/python2 BUILDSTDERR: /usr/bin/python will be removed or switched to Python 3 in the future. BUILDSTDERR: If you cannot make the switch now, please follow instructions at https://fedoraproject.org/wiki/Changes/Avoid_usr_bin_python_in_RPM_Build#Quick_Opt-Out + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.R0U3sq Processing files: libsedml-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.6K9NoZ + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.oWLPW8 + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: libsedml = 1:0.4.3-10.fc29 libsedml(riscv-64) = 1:0.4.3-10.fc29 libsedml.so.0()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libnuml.so.1()(64bit) libpthread.so.0()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: libsedml-devel-0.4.3-10.fc29.riscv64 Provides: libsedml-devel = 1:0.4.3-10.fc29 libsedml-devel(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsedml.so.0()(64bit) Processing files: libsedml-static-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.iEUqha + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.o4Yzb4 + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: libsedml-static = 1:0.4.3-10.fc29 libsedml-static(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python2-libsedml-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.H8RPAu + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ovweTC + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: python-libsedml = 1:0.4.3-10.fc29 python-libsedml(riscv-64) = 1:0.4.3-10.fc29 python2-libsedml = 1:0.4.3-10.fc29 python2-libsedml(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libnuml.so.1()(64bit) libpthread.so.0()(64bit) libpython2.7.so.1.0()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) python(abi) = 2.7 rtld(GNU_HASH) Obsoletes: python-libsedml < 1:0.4.3-10.fc29 Processing files: python3-libsedml-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.LJgjRH + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.r5z09r + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: python3-libsedml = 1:0.4.3-10.fc29 python3-libsedml(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libnuml.so.1()(64bit) libpthread.so.0()(64bit) libpython3.6m.so.1.0()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) python(abi) = 3.6 rtld(GNU_HASH) Processing files: java-SEDML-0.4.3-10.fc29.riscv64 Provides: java-SEDML = 1:0.4.3-10.fc29 java-SEDML(riscv-64) = 1:0.4.3-10.fc29 libsedmlj.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libnuml.so.1()(64bit) libpthread.so.0()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: perl-SEDML-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.xk4fGk + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.QpsUSK + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: perl(LibSEDML) perl(LibSEDML::ASTNode) perl(LibSEDML::ASTNodeList) perl(LibSEDML::AtomicDescription) perl(LibSEDML::AtomicValue) perl(LibSEDML::CVTerm) perl(LibSEDML::CVTermList) perl(LibSEDML::CompositeDescription) perl(LibSEDML::CompositeValue) perl(LibSEDML::Date) perl(LibSEDML::DateList) perl(LibSEDML::Dimension) perl(LibSEDML::DimensionDescription) perl(LibSEDML::DoubleStdVector) perl(LibSEDML::L3ParserSettings) perl(LibSEDML::MathML) perl(LibSEDML::Model) perl(LibSEDML::ModelCreatorList) perl(LibSEDML::NMBase) perl(LibSEDML::NUMLConstructorException) perl(LibSEDML::NUMLDocument) perl(LibSEDML::NUMLError) perl(LibSEDML::NUMLErrorLog) perl(LibSEDML::NUMLList) perl(LibSEDML::NUMLNamespaces) perl(LibSEDML::NUMLReader) perl(LibSEDML::NUMLWriter) perl(LibSEDML::OFStream) perl(LibSEDML::ONTOLOGY) perl(LibSEDML::OStream) perl(LibSEDML::OStringStream) perl(LibSEDML::OntologyTerm) perl(LibSEDML::OntologyTerms) perl(LibSEDML::ResultComponent) perl(LibSEDML::ResultComponents) perl(LibSEDML::SBMLNamespaces) perl(LibSEDML::SBase) perl(LibSEDML::SBaseList) perl(LibSEDML::SedAddXML) perl(LibSEDML::SedAlgorithm) perl(LibSEDML::SedAlgorithmParameter) perl(LibSEDML::SedBase) perl(LibSEDML::SedBaseList) perl(LibSEDML::SedChange) perl(LibSEDML::SedChangeAttribute) perl(LibSEDML::SedChangeXML) perl(LibSEDML::SedComputeChange) perl(LibSEDML::SedConstructorException) perl(LibSEDML::SedCurve) perl(LibSEDML::SedDataDescription) perl(LibSEDML::SedDataGenerator) perl(LibSEDML::SedDataSet) perl(LibSEDML::SedDataSource) perl(LibSEDML::SedDocument) perl(LibSEDML::SedError) perl(LibSEDML::SedErrorLog) perl(LibSEDML::SedErrorStdVector) perl(LibSEDML::SedFunctionalRange) perl(LibSEDML::SedListOf) perl(LibSEDML::SedListOfAlgorithmParameters) perl(LibSEDML::SedListOfChanges) perl(LibSEDML::SedListOfCurves) perl(LibSEDML::SedListOfDataDescriptions) perl(LibSEDML::SedListOfDataGenerators) perl(LibSEDML::SedListOfDataSets) perl(LibSEDML::SedListOfDataSources) perl(LibSEDML::SedListOfFunctionalRanges) perl(LibSEDML::SedListOfModels) perl(LibSEDML::SedListOfOutputs) perl(LibSEDML::SedListOfParameters) perl(LibSEDML::SedListOfRanges) perl(LibSEDML::SedListOfSimulations) perl(LibSEDML::SedListOfSlices) perl(LibSEDML::SedListOfSubTasks) perl(LibSEDML::SedListOfSurfaces) perl(LibSEDML::SedListOfTaskChanges) perl(LibSEDML::SedListOfTasks) perl(LibSEDML::SedListOfVariables) perl(LibSEDML::SedModel) perl(LibSEDML::SedNamespaces) perl(LibSEDML::SedNamespacesList) perl(LibSEDML::SedOneStep) perl(LibSEDML::SedOutput) perl(LibSEDML::SedParameter) perl(LibSEDML::SedPlot2D) perl(LibSEDML::SedPlot3D) perl(LibSEDML::SedRange) perl(LibSEDML::SedReader) perl(LibSEDML::SedRemoveXML) perl(LibSEDML::SedRepeatedTask) perl(LibSEDML::SedReport) perl(LibSEDML::SedSetValue) perl(LibSEDML::SedSimulation) perl(LibSEDML::SedSlice) perl(LibSEDML::SedSteadyState) perl(LibSEDML::SedSubTask) perl(LibSEDML::SedSurface) perl(LibSEDML::SedTask) perl(LibSEDML::SedUniformRange) perl(LibSEDML::SedUniformTimeCourse) perl(LibSEDML::SedVariable) perl(LibSEDML::SedVectorRange) perl(LibSEDML::SedWriter) perl(LibSEDML::Tuple) perl(LibSEDML::TupleDescription) perl(LibSEDML::XMLAttributes) perl(LibSEDML::XMLConstructorException) perl(LibSEDML::XMLError) perl(LibSEDML::XMLErrorLog) perl(LibSEDML::XMLInputStream) perl(LibSEDML::XMLNamespaces) perl(LibSEDML::XMLNode) perl(LibSEDML::XMLOutputStream) perl(LibSEDML::XMLOwningOutputFileStream) perl(LibSEDML::XMLOwningOutputStringStream) perl(LibSEDML::XMLToken) perl(LibSEDML::XMLTriple) perl(LibSEDML::XmlErrorStdVector) perl(LibSEDMLc) perl-SEDML = 1:0.4.3-10.fc29 perl-SEDML(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libnuml.so.1()(64bit) libperl.so.5.26()(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.27)(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) perl(DynaLoader) perl(Exporter) perl(base) perl(vars) rtld(GNU_HASH) Processing files: ruby-SEDML-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.EglPfs + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.cJFQiy + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: libSEDML.so()(64bit) ruby(SBML) = 0.4.3 ruby-SEDML = 1:0.4.3-10.fc29 ruby-SEDML(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libnuml.so.1()(64bit) libpthread.so.0()(64bit) libruby.so.2.5()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: R-SEDML-0.4.3-10.fc29.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.o4WcyE + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/doc/libsedml + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Kw5HMq + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64/usr/share/licenses/libsedml + exit 0 Provides: R-SEDML = 1:0.4.3-10.fc29 R-SEDML(riscv-64) = 1:0.4.3-10.fc29 libSEDML.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libnuml.so.1()(64bit) libpthread.so.0()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libxml2.so.2()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: libsedml-debugsource-0.4.3-10.fc29.riscv64 Provides: libsedml-debugsource = 1:0.4.3-10.fc29 libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsedml-debuginfo-0.4.3-10.fc29.riscv64 Provides: debuginfo(build-id) = a05a2c9546bb35fd1b4d37b13f88701bfebaa7ae libsedml-debuginfo = 1:0.4.3-10.fc29 libsedml-debuginfo(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Processing files: python2-libsedml-debuginfo-0.4.3-10.fc29.riscv64 Provides: debuginfo(build-id) = 74070c2e08779b8aad97af39bbabd3e8b6c2e019 python2-libsedml-debuginfo = 1:0.4.3-10.fc29 python2-libsedml-debuginfo(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Processing files: python3-libsedml-debuginfo-0.4.3-10.fc29.riscv64 Provides: debuginfo(build-id) = 295488f206b086c40f0d5aa348316e3fdf22e7f3 python3-libsedml-debuginfo = 1:0.4.3-10.fc29 python3-libsedml-debuginfo(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Processing files: java-SEDML-debuginfo-0.4.3-10.fc29.riscv64 Provides: debuginfo(build-id) = 52737fe12d769be99a450540df88cd6efcb310bc java-SEDML-debuginfo = 1:0.4.3-10.fc29 java-SEDML-debuginfo(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Processing files: perl-SEDML-debuginfo-0.4.3-10.fc29.riscv64 Provides: debuginfo(build-id) = ed424c7e125a68a25610f30f60b7d0c5ff4f1ba9 perl-SEDML-debuginfo = 1:0.4.3-10.fc29 perl-SEDML-debuginfo(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Processing files: ruby-SEDML-debuginfo-0.4.3-10.fc29.riscv64 Provides: debuginfo(build-id) = 3489f5b171c6d71cac6865ba614783d595c79898 ruby-SEDML-debuginfo = 1:0.4.3-10.fc29 ruby-SEDML-debuginfo(riscv-64) = 1:0.4.3-10.fc29 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Processing files: R-SEDML-debuginfo-0.4.3-10.fc29.riscv64 Provides: R-SEDML-debuginfo = 1:0.4.3-10.fc29 R-SEDML-debuginfo(riscv-64) = 1:0.4.3-10.fc29 debuginfo(build-id) = 4e2b9c8624448ed16085bced85d30c71ac123910 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.3-10.fc29 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 Wrote: /builddir/build/RPMS/libsedml-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-devel-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-static-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/python2-libsedml-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/java-SEDML-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/perl-SEDML-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/ruby-SEDML-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/R-SEDML-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-debugsource-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-debuginfo-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/python2-libsedml-debuginfo-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-debuginfo-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/java-SEDML-debuginfo-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/perl-SEDML-debuginfo-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/ruby-SEDML-debuginfo-0.4.3-10.fc29.riscv64.rpm Wrote: /builddir/build/RPMS/R-SEDML-debuginfo-0.4.3-10.fc29.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.hq7xRl + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/libsedml-0.4.3-10.fc29.riscv64 + exit 0 Child return code was: 0