Mock Version: 2.15 Mock Version: 2.15 Mock Version: 2.15 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'], chrootPath='/var/lib/mock/f41-build-822973-153315/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721347200 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-19.fc41.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'], chrootPath='/var/lib/mock/f41-build-822973-153315/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueraiseExc=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.81F9BH + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + test -d /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.LLLmyi + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + rm -rf NEAT-0.9.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-neatdend-0.9.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd NEAT-0.9.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-neatdend-0.9.2 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-feat-support-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/neuron/neuronmodel.py... Applied patch neat/tools/simtools/neuron/neuronmodel.py cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 0001-feat-support-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/504b39822b9913e5a8c6aff65df840cc2e31167d.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/net/netsim.pyx... Applied patch neat/tools/simtools/net/netsim.pyx cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 504b39822b9913e5a8c6aff65df840cc2e31167d.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/plottools/scalebars.py... Applied patch neat/tools/plottools/scalebars.py cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch --author 'rpm-build ' + sed -i 's/^numpy~=1.20.2/numpy>=1.20.2/' requirements/requirements.txt + sed -i 's/^matplotlib~=3.4.1/matplotlib>=3.4.1/' requirements/requirements.txt + sed -i 's/^pytest~=5.3.2/pytest>=5.3.2/' requirements/requirements.txt + sed -i 's/^scikit_learn~=0.24.2/scikit_learn>=0.24.2/' requirements/requirements.txt + sed -i 's/^scipy~=1.6.3/scipy>=1.6.3/' requirements/requirements.txt + sed -i 's/^sympy~=1.7.1/sympy>=1.7.1/' requirements/requirements.txt + sed -i 's/^cython~=0.29.4/cython>=3.0.0/' requirements/requirements.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.cZymKz + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement not satisfied: setuptools Handling wheel from build-system.requires Requirement not satisfied: wheel Handling Cython from build-system.requires Requirement not satisfied: Cython Handling numpy from build-system.requires Requirement not satisfied: numpy Handling setuptools >= 40.8 from default build backend Requirement not satisfied: setuptools >= 40.8 Handling wheel from default build backend Requirement not satisfied: wheel Exiting dependency generation pass: build backend + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-19.fc41.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'], chrootPath='/var/lib/mock/f41-build-822973-153315/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueraiseExc=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.KFgGhf + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + test -d /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.eEPs1Q + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + rm -rf NEAT-0.9.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-neatdend-0.9.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd NEAT-0.9.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-neatdend-0.9.2 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-feat-support-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/neuron/neuronmodel.py... Applied patch neat/tools/simtools/neuron/neuronmodel.py cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 0001-feat-support-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/504b39822b9913e5a8c6aff65df840cc2e31167d.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/net/netsim.pyx... Applied patch neat/tools/simtools/net/netsim.pyx cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 504b39822b9913e5a8c6aff65df840cc2e31167d.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/plottools/scalebars.py... Applied patch neat/tools/plottools/scalebars.py cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch --author 'rpm-build ' + sed -i 's/^numpy~=1.20.2/numpy>=1.20.2/' requirements/requirements.txt + sed -i 's/^matplotlib~=3.4.1/matplotlib>=3.4.1/' requirements/requirements.txt + sed -i 's/^pytest~=5.3.2/pytest>=5.3.2/' requirements/requirements.txt + sed -i 's/^scikit_learn~=0.24.2/scikit_learn>=0.24.2/' requirements/requirements.txt + sed -i 's/^scipy~=1.6.3/scipy>=1.6.3/' requirements/requirements.txt + sed -i 's/^sympy~=1.7.1/sympy>=1.7.1/' requirements/requirements.txt + sed -i 's/^cython~=0.29.4/cython>=3.0.0/' requirements/requirements.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Gksts5 + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 69.2.0) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.43.0) Handling Cython from build-system.requires Requirement satisfied: Cython (installed: Cython 3.0.9) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 1.26.4) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.43.0) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. Compiling neat/tools/simtools/net/netsim.pyx because it changed. [1/1] Cythonizing neat/tools/simtools/net/netsim.pyx running egg_info creating neatdend.egg-info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt writing manifest file 'neatdend.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/neatdend-0.9.1.dist-info' Handling numpy >=1.20.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: numpy >=1.20.2 (installed: numpy 1.26.4) Handling matplotlib >=3.4.1 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: matplotlib >=3.4.1 Handling cython >=3.0.0 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: cython >=3.0.0 (installed: cython 3.0.9) Handling scipy >=1.6.3 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: scipy >=1.6.3 Handling sympy >=1.7.1 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: sympy >=1.7.1 Handling pytest >=5.3.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: pytest >=5.3.2 (installed: pytest 7.4.3) Handling scikit-learn >=0.24.2 from hook generated metadata: Requires-Dist (neatdend) Requirement not satisfied: scikit-learn >=0.24.2 + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires + rm -rfv neatdend-0.9.1.dist-info/ removed 'neatdend-0.9.1.dist-info/METADATA' removed 'neatdend-0.9.1.dist-info/LICENSE.txt' removed 'neatdend-0.9.1.dist-info/top_level.txt' removed directory 'neatdend-0.9.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-19.fc41.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'], chrootPath='/var/lib/mock/f41-build-822973-153315/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueraiseExc=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -br --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.pKFvRf + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + test -d /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.aP9YLq + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + rm -rf NEAT-0.9.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/python-neatdend-0.9.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd NEAT-0.9.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/git init -q + /usr/bin/git config user.name rpm-build + /usr/bin/git config user.email '' + /usr/bin/git config gc.auto 0 + /usr/bin/git add --force . + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q --allow-empty -a --author 'rpm-build ' -m 'python-neatdend-0.9.2 base' + /usr/bin/git checkout --track -b rpm-build Switched to a new branch 'rpm-build' branch 'rpm-build' set up to track 'master'. + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/0001-feat-support-all-arches.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/neuron/neuronmodel.py... Applied patch neat/tools/simtools/neuron/neuronmodel.py cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 0001-feat-support-all-arches.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/504b39822b9913e5a8c6aff65df840cc2e31167d.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/simtools/net/netsim.pyx... Applied patch neat/tools/simtools/net/netsim.pyx cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 504b39822b9913e5a8c6aff65df840cc2e31167d.patch --author 'rpm-build ' + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch + /usr/bin/git apply --index --reject - Checking patch neat/tools/plottools/scalebars.py... Applied patch neat/tools/plottools/scalebars.py cleanly. + GIT_COMMITTER_DATE=@1721347200 + GIT_AUTHOR_DATE=@1721347200 + /usr/bin/git commit -q -m 8eb1f4be85da0c8fdbcbac627c5198a67e29b22c.patch --author 'rpm-build ' + sed -i 's/^numpy~=1.20.2/numpy>=1.20.2/' requirements/requirements.txt + sed -i 's/^matplotlib~=3.4.1/matplotlib>=3.4.1/' requirements/requirements.txt + sed -i 's/^pytest~=5.3.2/pytest>=5.3.2/' requirements/requirements.txt + sed -i 's/^scikit_learn~=0.24.2/scikit_learn>=0.24.2/' requirements/requirements.txt + sed -i 's/^scipy~=1.6.3/scipy>=1.6.3/' requirements/requirements.txt + sed -i 's/^sympy~=1.7.1/sympy>=1.7.1/' requirements/requirements.txt + sed -i 's/^cython~=0.29.4/cython>=3.0.0/' requirements/requirements.txt + RPM_EC=0 ++ jobs -p + exit 0 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.ZUBr60 + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 69.2.0) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.43.0) Handling Cython from build-system.requires Requirement satisfied: Cython (installed: Cython 3.0.9) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 1.26.4) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.43.0) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. Compiling neat/tools/simtools/net/netsim.pyx because it changed. [1/1] Cythonizing neat/tools/simtools/net/netsim.pyx running egg_info creating neatdend.egg-info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt writing manifest file 'neatdend.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/neatdend-0.9.1.dist-info' Handling numpy >=1.20.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: numpy >=1.20.2 (installed: numpy 1.26.4) Handling matplotlib >=3.4.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: matplotlib >=3.4.1 (installed: matplotlib 3.9.1) Handling cython >=3.0.0 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: cython >=3.0.0 (installed: cython 3.0.9) Handling scipy >=1.6.3 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scipy >=1.6.3 (installed: scipy 1.11.3) Handling sympy >=1.7.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: sympy >=1.7.1 (installed: sympy 1.13.0) Handling pytest >=5.3.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: pytest >=5.3.2 (installed: pytest 7.4.3) Handling scikit-learn >=0.24.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scikit-learn >=0.24.2 (installed: scikit-learn 1.4.1.post1) + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires + rm -rfv neatdend-0.9.1.dist-info/ removed 'neatdend-0.9.1.dist-info/METADATA' removed 'neatdend-0.9.1.dist-info/LICENSE.txt' removed 'neatdend-0.9.1.dist-info/top_level.txt' removed directory 'neatdend-0.9.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-19.fc41.buildreqs.nosrc.rpm Child return code was: 11 Dynamic buildrequires detected Going to install missing buildrequires. See root.log for details. ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'], chrootPath='/var/lib/mock/f41-build-822973-153315/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -ba --noprep --target riscv64 --nodeps /builddir/build/SPECS/python-neatdend.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1721347200 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.w5C9dw + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + echo -n + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + RPM_TOXENV=py313 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires -r Handling setuptools from build-system.requires Requirement satisfied: setuptools (installed: setuptools 69.2.0) Handling wheel from build-system.requires Requirement satisfied: wheel (installed: wheel 0.43.0) Handling Cython from build-system.requires Requirement satisfied: Cython (installed: Cython 3.0.9) Handling numpy from build-system.requires Requirement satisfied: numpy (installed: numpy 1.26.4) Handling setuptools >= 40.8 from default build backend Requirement satisfied: setuptools >= 40.8 (installed: setuptools 69.2.0) Handling wheel from default build backend Requirement satisfied: wheel (installed: wheel 0.43.0) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running egg_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.43.0) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/neatdend-0.9.1.dist-info' Handling numpy >=1.20.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: numpy >=1.20.2 (installed: numpy 1.26.4) Handling matplotlib >=3.4.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: matplotlib >=3.4.1 (installed: matplotlib 3.9.1) Handling cython >=3.0.0 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: cython >=3.0.0 (installed: cython 3.0.9) Handling scipy >=1.6.3 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scipy >=1.6.3 (installed: scipy 1.11.3) Handling sympy >=1.7.1 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: sympy >=1.7.1 (installed: sympy 1.13.0) Handling pytest >=5.3.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: pytest >=5.3.2 (installed: pytest 7.4.3) Handling scikit-learn >=0.24.2 from hook generated metadata: Requires-Dist (neatdend) Requirement satisfied: scikit-learn >=0.24.2 (installed: scikit-learn 1.4.1.post1) + cat /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-buildrequires + rm -rfv neatdend-0.9.1.dist-info/ removed 'neatdend-0.9.1.dist-info/METADATA' removed 'neatdend-0.9.1.dist-info/LICENSE.txt' removed 'neatdend-0.9.1.dist-info/top_level.txt' removed directory 'neatdend-0.9.1.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Ieb6xv + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd NEAT-0.9.2 + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir Processing /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running dist_info creating /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info writing /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/dependency_links.txt writing requirements to /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/SOURCES.txt' dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-modern-metadata-hjd6xgsg/neatdend-0.9.1.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: neatdend Building wheel for neatdend (pyproject.toml): started Running command Building wheel for neatdend (pyproject.toml) Warning: Multiple cython sources found for extension 'netsim': ['neat/tools/simtools/net/netsim.pyx', 'neat/tools/simtools/net/netsim.pyx'] See https://cython.readthedocs.io/en/latest/src/userguide/sharing_declarations.html for sharing declarations among Cython files. running bdist_wheel running build running build_py creating build creating build/lib.linux-riscv64-cpython-313 creating build/lib.linux-riscv64-cpython-313/neat copying neat/__version__.py -> build/lib.linux-riscv64-cpython-313/neat copying neat/__init__.py -> build/lib.linux-riscv64-cpython-313/neat creating build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/compartmenttree.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/sovtree.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/morphtree.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/greenstree.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/netree.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/phystree.py -> build/lib.linux-riscv64-cpython-313/neat/trees copying neat/trees/stree.py -> build/lib.linux-riscv64-cpython-313/neat/trees creating build/lib.linux-riscv64-cpython-313/neat/tools copying neat/tools/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/tools copying neat/tools/kernelextraction.py -> build/lib.linux-riscv64-cpython-313/neat/tools creating build/lib.linux-riscv64-cpython-313/neat/tools/fittools copying neat/tools/fittools/compartmentfitter.py -> build/lib.linux-riscv64-cpython-313/neat/tools/fittools copying neat/tools/fittools/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/tools/fittools copying neat/tools/fittools/histogramsegmentation.py -> build/lib.linux-riscv64-cpython-313/neat/tools/fittools copying neat/tools/fittools/iepsolver.py -> build/lib.linux-riscv64-cpython-313/neat/tools/fittools copying neat/tools/fittools/zerofinding.py -> build/lib.linux-riscv64-cpython-313/neat/tools/fittools creating build/lib.linux-riscv64-cpython-313/neat/tools/plottools copying neat/tools/plottools/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/tools/plottools copying neat/tools/plottools/scalebars.py -> build/lib.linux-riscv64-cpython-313/neat/tools/plottools creating build/lib.linux-riscv64-cpython-313/neat/tools/simtools creating build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron copying neat/tools/simtools/neuron/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron copying neat/tools/simtools/neuron/neuronmodel.py -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron creating build/lib.linux-riscv64-cpython-313/neat/channels copying neat/channels/writemodfiles.py -> build/lib.linux-riscv64-cpython-313/neat/channels copying neat/channels/ionchannels.py -> build/lib.linux-riscv64-cpython-313/neat/channels copying neat/channels/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/channels copying neat/channels/concmechs.py -> build/lib.linux-riscv64-cpython-313/neat/channels copying neat/channels/writecppcode.py -> build/lib.linux-riscv64-cpython-313/neat/channels creating build/lib.linux-riscv64-cpython-313/neat/channels/channelcollection copying neat/channels/channelcollection/__init__.py -> build/lib.linux-riscv64-cpython-313/neat/channels/channelcollection copying neat/channels/channelcollection/channelcollection.py -> build/lib.linux-riscv64-cpython-313/neat/channels/channelcollection running egg_info writing neatdend.egg-info/PKG-INFO writing dependency_links to neatdend.egg-info/dependency_links.txt writing requirements to neatdend.egg-info/requires.txt writing top-level names to neatdend.egg-info/top_level.txt dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib64/python3.13/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'neatdend.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'LICENCE.txt' adding license file 'LICENSE.txt' writing manifest file 'neatdend.egg-info/SOURCES.txt' /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'neat.tools.simtools.net' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'neat.tools.simtools.net' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'neat.tools.simtools.net' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'neat.tools.simtools.net' to be distributed and are already explicitly excluding 'neat.tools.simtools.net' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3.13/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'neat.tools.simtools.neuron.mech_storage' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'neat.tools.simtools.neuron.mech_storage' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'neat.tools.simtools.neuron.mech_storage' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'neat.tools.simtools.neuron.mech_storage' to be distributed and are already explicitly excluding 'neat.tools.simtools.neuron.mech_storage' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) creating build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Ionchannels.cc -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Ionchannels.h -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/NETC.cc -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/NETC.h -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Synapses.cc -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Synapses.h -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/Tools.cc -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/netsim.cpp -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net copying neat/tools/simtools/net/netsim.pyx -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net creating build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/CaDyn.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/CaPump.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUClamp.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUClamp2.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUConductance.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/OUReversal.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/Shunt.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/SinClamp.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/VecStim.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/WNClamp.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/conc_ca.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/conc_ca_.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/conc_ca__.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified2.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled_prox.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_v_from_vector.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/gap.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/rel.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/tools/simtools/neuron/mech_storage/release_BMK.mod -> build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage copying neat/channels/compilechannels -> build/lib.linux-riscv64-cpython-313/neat/channels running build_ext building 'netsim' extension creating build/temp.linux-riscv64-cpython-313 creating build/temp.linux-riscv64-cpython-313/neat creating build/temp.linux-riscv64-cpython-313/neat/tools creating build/temp.linux-riscv64-cpython-313/neat/tools/simtools creating build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/Ionchannels.cc -o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/Ionchannels.o -w -O3 -std=gnu++11 gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/NETC.cc -o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/NETC.o -w -O3 -std=gnu++11 gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/Synapses.cc -o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/Synapses.o -w -O3 -std=gnu++11 gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/Tools.cc -o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/Tools.o -w -O3 -std=gnu++11 gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Ineat/tools/simtools/net -I/usr/lib64/python3.13/site-packages/numpy/core/include -Ineat/tools/simtools/net/*.h -I/usr/include/python3.13 -c neat/tools/simtools/net/netsim.cpp -o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/netsim.o -w -O3 -std=gnu++11 g++ -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/Ionchannels.o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/NETC.o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/Synapses.o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/Tools.o build/temp.linux-riscv64-cpython-313/neat/tools/simtools/net/netsim.o -L/usr/lib64 -o build/lib.linux-riscv64-cpython-313/neat/netsim.cpython-313-riscv64-linux-gnu.so running build_scripts creating build/scripts-3.13 copying and adjusting neat/channels/compilechannels -> build/scripts-3.13 changing mode of build/scripts-3.13/compilechannels from 644 to 755 installing to build/bdist.linux-riscv64/wheel running install running install_lib creating build/bdist.linux-riscv64 creating build/bdist.linux-riscv64/wheel creating build/bdist.linux-riscv64/wheel/neat creating build/bdist.linux-riscv64/wheel/neat/tools creating build/bdist.linux-riscv64/wheel/neat/tools/plottools copying build/lib.linux-riscv64-cpython-313/neat/tools/plottools/__init__.py -> build/bdist.linux-riscv64/wheel/neat/tools/plottools copying build/lib.linux-riscv64-cpython-313/neat/tools/plottools/scalebars.py -> build/bdist.linux-riscv64/wheel/neat/tools/plottools creating build/bdist.linux-riscv64/wheel/neat/tools/fittools copying build/lib.linux-riscv64-cpython-313/neat/tools/fittools/compartmentfitter.py -> build/bdist.linux-riscv64/wheel/neat/tools/fittools copying build/lib.linux-riscv64-cpython-313/neat/tools/fittools/__init__.py -> build/bdist.linux-riscv64/wheel/neat/tools/fittools copying build/lib.linux-riscv64-cpython-313/neat/tools/fittools/histogramsegmentation.py -> build/bdist.linux-riscv64/wheel/neat/tools/fittools copying build/lib.linux-riscv64-cpython-313/neat/tools/fittools/iepsolver.py -> build/bdist.linux-riscv64/wheel/neat/tools/fittools copying build/lib.linux-riscv64-cpython-313/neat/tools/fittools/zerofinding.py -> build/bdist.linux-riscv64/wheel/neat/tools/fittools copying build/lib.linux-riscv64-cpython-313/neat/tools/__init__.py -> build/bdist.linux-riscv64/wheel/neat/tools creating build/bdist.linux-riscv64/wheel/neat/tools/simtools creating build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/Ionchannels.cc -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/NETC.h -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/netsim.cpp -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/netsim.pyx -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/Tools.cc -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/Synapses.cc -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/NETC.cc -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/Ionchannels.h -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/net/Synapses.h -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/net creating build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron creating build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled_prox.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/conc_ca_.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/conc_ca__.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/release_BMK.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUReversal.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/VecStim.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/rel.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/SinClamp.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/gap.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUClamp2.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/CaDyn.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/CaPump.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUClamp.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/OUConductance.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_v_from_vector.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/Shunt.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/WNClamp.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/conc_ca.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified2.mod -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron/mech_storage copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/__init__.py -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron copying build/lib.linux-riscv64-cpython-313/neat/tools/simtools/neuron/neuronmodel.py -> build/bdist.linux-riscv64/wheel/neat/tools/simtools/neuron copying build/lib.linux-riscv64-cpython-313/neat/tools/kernelextraction.py -> build/bdist.linux-riscv64/wheel/neat/tools copying build/lib.linux-riscv64-cpython-313/neat/__version__.py -> build/bdist.linux-riscv64/wheel/neat creating build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/compartmenttree.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/__init__.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/sovtree.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/morphtree.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/greenstree.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/netree.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/phystree.py -> build/bdist.linux-riscv64/wheel/neat/trees copying build/lib.linux-riscv64-cpython-313/neat/trees/stree.py -> build/bdist.linux-riscv64/wheel/neat/trees creating build/bdist.linux-riscv64/wheel/neat/channels creating build/bdist.linux-riscv64/wheel/neat/channels/channelcollection copying build/lib.linux-riscv64-cpython-313/neat/channels/channelcollection/__init__.py -> build/bdist.linux-riscv64/wheel/neat/channels/channelcollection copying build/lib.linux-riscv64-cpython-313/neat/channels/channelcollection/channelcollection.py -> build/bdist.linux-riscv64/wheel/neat/channels/channelcollection copying build/lib.linux-riscv64-cpython-313/neat/channels/writemodfiles.py -> build/bdist.linux-riscv64/wheel/neat/channels copying build/lib.linux-riscv64-cpython-313/neat/channels/ionchannels.py -> build/bdist.linux-riscv64/wheel/neat/channels copying build/lib.linux-riscv64-cpython-313/neat/channels/__init__.py -> build/bdist.linux-riscv64/wheel/neat/channels copying build/lib.linux-riscv64-cpython-313/neat/channels/concmechs.py -> build/bdist.linux-riscv64/wheel/neat/channels copying build/lib.linux-riscv64-cpython-313/neat/channels/compilechannels -> build/bdist.linux-riscv64/wheel/neat/channels copying build/lib.linux-riscv64-cpython-313/neat/channels/writecppcode.py -> build/bdist.linux-riscv64/wheel/neat/channels copying build/lib.linux-riscv64-cpython-313/neat/__init__.py -> build/bdist.linux-riscv64/wheel/neat copying build/lib.linux-riscv64-cpython-313/neat/netsim.cpython-313-riscv64-linux-gnu.so -> build/bdist.linux-riscv64/wheel/neat running install_egg_info Copying neatdend.egg-info to build/bdist.linux-riscv64/wheel/neatdend-0.9.1-py3.13.egg-info running install_scripts creating build/bdist.linux-riscv64/wheel/neatdend-0.9.1.data creating build/bdist.linux-riscv64/wheel/neatdend-0.9.1.data/scripts copying build/scripts-3.13/compilechannels -> build/bdist.linux-riscv64/wheel/neatdend-0.9.1.data/scripts changing mode of build/bdist.linux-riscv64/wheel/neatdend-0.9.1.data/scripts/compilechannels to 755 creating build/bdist.linux-riscv64/wheel/neatdend-0.9.1.dist-info/WHEEL creating '/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir/pip-wheel-zgt0yal0/.tmp-dr0bfdu3/neatdend-0.9.1-cp313-cp313-linux_riscv64.whl' and adding 'build/bdist.linux-riscv64/wheel' to it adding 'neat/__init__.py' adding 'neat/__version__.py' adding 'neat/netsim.cpython-313-riscv64-linux-gnu.so' adding 'neat/channels/__init__.py' adding 'neat/channels/compilechannels' adding 'neat/channels/concmechs.py' adding 'neat/channels/ionchannels.py' adding 'neat/channels/writecppcode.py' adding 'neat/channels/writemodfiles.py' adding 'neat/channels/channelcollection/__init__.py' adding 'neat/channels/channelcollection/channelcollection.py' adding 'neat/tools/__init__.py' adding 'neat/tools/kernelextraction.py' adding 'neat/tools/fittools/__init__.py' adding 'neat/tools/fittools/compartmentfitter.py' adding 'neat/tools/fittools/histogramsegmentation.py' adding 'neat/tools/fittools/iepsolver.py' adding 'neat/tools/fittools/zerofinding.py' adding 'neat/tools/plottools/__init__.py' adding 'neat/tools/plottools/scalebars.py' adding 'neat/tools/simtools/net/Ionchannels.cc' adding 'neat/tools/simtools/net/Ionchannels.h' adding 'neat/tools/simtools/net/NETC.cc' adding 'neat/tools/simtools/net/NETC.h' adding 'neat/tools/simtools/net/Synapses.cc' adding 'neat/tools/simtools/net/Synapses.h' adding 'neat/tools/simtools/net/Tools.cc' adding 'neat/tools/simtools/net/netsim.cpp' adding 'neat/tools/simtools/net/netsim.pyx' adding 'neat/tools/simtools/neuron/__init__.py' adding 'neat/tools/simtools/neuron/neuronmodel.py' adding 'neat/tools/simtools/neuron/mech_storage/CaDyn.mod' adding 'neat/tools/simtools/neuron/mech_storage/CaPump.mod' adding 'neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUClamp.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUClamp2.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUConductance.mod' adding 'neat/tools/simtools/neuron/mech_storage/OUReversal.mod' adding 'neat/tools/simtools/neuron/mech_storage/Shunt.mod' adding 'neat/tools/simtools/neuron/mech_storage/SinClamp.mod' adding 'neat/tools/simtools/neuron/mech_storage/VecStim.mod' adding 'neat/tools/simtools/neuron/mech_storage/WNClamp.mod' adding 'neat/tools/simtools/neuron/mech_storage/conc_ca.mod' adding 'neat/tools/simtools/neuron/mech_storage/conc_ca_.mod' adding 'neat/tools/simtools/neuron/mech_storage/conc_ca__.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_modified2.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_rescaled_prox.mod' adding 'neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA_v_from_vector.mod' adding 'neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod' adding 'neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod' adding 'neat/tools/simtools/neuron/mech_storage/gap.mod' adding 'neat/tools/simtools/neuron/mech_storage/rel.mod' adding 'neat/tools/simtools/neuron/mech_storage/release_BMK.mod' adding 'neat/trees/__init__.py' adding 'neat/trees/compartmenttree.py' adding 'neat/trees/greenstree.py' adding 'neat/trees/morphtree.py' adding 'neat/trees/netree.py' adding 'neat/trees/phystree.py' adding 'neat/trees/sovtree.py' adding 'neat/trees/stree.py' adding 'neatdend-0.9.1.data/scripts/compilechannels' adding 'neatdend-0.9.1.dist-info/LICENSE.txt' adding 'neatdend-0.9.1.dist-info/METADATA' adding 'neatdend-0.9.1.dist-info/WHEEL' adding 'neatdend-0.9.1.dist-info/top_level.txt' adding 'neatdend-0.9.1.dist-info/RECORD' removing build/bdist.linux-riscv64/wheel Building wheel for neatdend (pyproject.toml): finished with status 'done' Created wheel for neatdend: filename=neatdend-0.9.1-cp313-cp313-linux_riscv64.whl size=1541603 sha256=61d4bbd43211c2af4ac2d7eada9bdf6915a56aba10ad7df978f21be33ba4859c Stored in directory: /builddir/.cache/pip/wheels/4c/52/e5/f12a0b26b7bc958a1b068dd72e437c3fd1e5ec3827dcb974e8 Successfully built neatdend + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.PjO51h + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + '[' /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build + mkdir /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd NEAT-0.9.2 ++ ls /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir/neatdend-0.9.1-cp313-cp313-linux_riscv64.whl ++ xargs basename --multiple ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' + specifier=neatdend==0.9.1 + '[' -z neatdend==0.9.1 ']' + TMPDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir neatdend==0.9.1 Using pip 24.1.1 from /usr/lib/python3.13/site-packages/pip (python 3.13) Looking in links: /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/pyproject-wheeldir Processing ./pyproject-wheeldir/neatdend-0.9.1-cp313-cp313-linux_riscv64.whl Installing collected packages: neatdend Successfully installed neatdend-0.9.1 + '[' -d /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin/compilechannels /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin/compilechannels: updating + rm -rfv /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages '!=' /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/python3.13/site-packages ']' + '[' -d /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages ']' + site_dirs+=("/usr/lib64/python3.13/site-packages") + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT$site_dir/*.dist-info + echo '%ghost /usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT --record /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/RECORD --output /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-record + rm -fv /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/RECORD removed '/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/RECORD' + rm -fv /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/REQUESTED removed '/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neatdend-0.9.1.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_FILES_ESCAPE=4.19 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-files --output-modules /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-modules --buildroot /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT --sitelib /usr/lib/python3.13/site-packages --sitearch /usr/lib64/python3.13/site-packages --python-version 3.13 --pyproject-record /builddir/build/BUILD/python-neatdend-0.9.2-build/python-neatdend-0.9.2-19.fc41.riscv64-pyproject-record --prefix /usr -l neat + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 0.9.2-19.fc41 --unique-debug-suffix -0.9.2-19.fc41.riscv64 --unique-debug-src-base python-neatdend-0.9.2-19.fc41.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/python-neatdend-0.9.2-19.fc41.riscv64 2523 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/NETC.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/netsim.pyx is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/Tools.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/Synapses.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/NETC.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/net/Synapses.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/NMDA_Mg_T.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/double_exp_AMPA_NMDA.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/conc_ca_.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/conc_ca__.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/release_BMK.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/VecStim.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/rel.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/epsc_double_exp.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/gap.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/OUClamp2.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/OUClamp.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/exp_AMPA_NMDA.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/OUConductance.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/Shunt.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/WNClamp.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech_storage/conc_ca.mod is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-19.fc41.riscv64/neat/tools/simtools/net/NETC.h is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-19.fc41.riscv64/neat/tools/simtools/net/Tools.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-19.fc41.riscv64/neat/tools/simtools/net/Synapses.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-19.fc41.riscv64/neat/tools/simtools/net/NETC.cc is executable but has no shebang, removing executable bit *** WARNING: ./usr/src/debug/python-neatdend-0.9.2-19.fc41.riscv64/neat/tools/simtools/net/Synapses.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13 using python3.13 /usr/lib64/python3.13/site-packages/neat/channels/ionchannels.py:111: SyntaxWarning: invalid escape sequence '\o' /usr/lib64/python3.13/site-packages/neat/tools/fittools/compartmentfitter.py:962: SyntaxWarning: invalid escape sequence '\l' /usr/lib64/python3.13/site-packages/neat/channels/ionchannels.py:111: SyntaxWarning: invalid escape sequence '\o' /usr/lib64/python3.13/site-packages/neat/tools/fittools/compartmentfitter.py:962: SyntaxWarning: invalid escape sequence '\l' /usr/lib64/python3.13/site-packages/neat/trees/netree.py:21: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/neat/trees/netree.py:21: SyntaxWarning: invalid escape sequence '\s' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2405: SyntaxWarning: invalid escape sequence '\m' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2639: SyntaxWarning: invalid escape sequence '\m' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2405: SyntaxWarning: invalid escape sequence '\m' /usr/lib64/python3.13/site-packages/neat/trees/morphtree.py:2639: SyntaxWarning: invalid escape sequence '\m' Bytecompiling .py files below /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/plottools/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/plottools/__pycache__/scalebars.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/histogramsegmentation.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/zerofinding.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/compartmentfitter.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/iepsolver.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/compartmentfitter.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/iepsolver.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/histogramsegmentation.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/fittools/__pycache__/zerofinding.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/__pycache__/neuronmodel.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/__pycache__/neuronmodel.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/__pycache__/kernelextraction.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/__pycache__/kernelextraction.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/stree.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/compartmenttree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/greenstree.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/netree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/sovtree.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/compartmenttree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/netree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/phystree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/morphtree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/channelcollection/__pycache__/channelcollection.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/channelcollection/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/phystree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/writecppcode.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/writemodfiles.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/concmechs.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/morphtree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/ionchannels.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/__pycache__/__init__.cpython-313.pyc: rewriting with normalized contents /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/__pycache__/ionchannels.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/__pycache__/__version__.cpython-313.pyc: rewriting with normalized contents Scanned 40 directories and 135 files, processed 39 inodes, 39 modified (22 replaced + 17 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/python-neatdend-0.9.2-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.OnJh4A + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd NEAT-0.9.2 + mkdir testdir + pushd testdir ~/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/testdir ~/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 + PYTHONPATH=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib/python3.13/site-packages:/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages + /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/bin/compilechannels default Warning: no DISPLAY environment variable. --No graphics will be displayed. /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron Mod files: "mech/mech//CaDyn.mod" "mech/mech//CaPump.mod" "mech/mech//IKv3_1.mod" "mech/mech//INa_Ta.mod" "mech/mech//ISK.mod" "mech/mech//ITestChannel.mod" "mech/mech//ITestChannel2.mod" "mech/mech//Ih.mod" "mech/mech//NMDA_Mg_T.mod" "mech/mech//OUClamp.mod" "mech/mech//OUClamp2.mod" "mech/mech//OUConductance.mod" "mech/mech//OUReversal.mod" "mech/mech//Shunt.mod" "mech/mech//SinClamp.mod" "mech/mech//VecStim.mod" "mech/mech//WNClamp.mod" "mech/mech//conc_ca.mod" "mech/mech//conc_ca_.mod" "mech/mech//conc_ca__.mod" "mech/mech//double_exp_AMPA_NMDA.mod" "mech/mech//double_exp_AMPA_NMDA_modified.mod" "mech/mech//double_exp_AMPA_NMDA_modified2.mod" "mech/mech//double_exp_AMPA_NMDA_rescaled.mod" "mech/mech//double_exp_AMPA_NMDA_rescaled_prox.mod" "mech/mech//double_exp_AMPA_NMDA_v_from_vector.mod" "mech/mech//epsc_double_exp.mod" "mech/mech//exp_AMPA_NMDA.mod" "mech/mech//gap.mod" "mech/mech//rel.mod" "mech/mech//release_BMK.mod" Creating 'riscv64' directory for .o files. -> Compiling mod_func.cpp -> NMODL ../mech//CaPump.mod -> NMODL ../mech//CaDyn.mod -> NMODL ../mech//IKv3_1.mod Translating CaPump.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/CaPump.c Translating CaDyn.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/CaDyn.c Translating IKv3_1.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/IKv3_1.c Thread Safe Thread Safe Thread Safe -> NMODL ../mech//ISK.mod -> NMODL ../mech//INa_Ta.mod -> NMODL ../mech//ITestChannel.mod Translating ISK.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/ISK.c Translating INa_Ta.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/INa_Ta.c Thread Safe Thread Safe Translating ITestChannel.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/ITestChannel.c -> NMODL ../mech//ITestChannel2.mod -> NMODL ../mech//Ih.mod Thread Safe -> NMODL ../mech//NMDA_Mg_T.mod Translating ITestChannel2.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/ITestChannel2.c Translating Ih.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/Ih.c Thread Safe -> NMODL ../mech//OUClamp.mod Translating NMDA_Mg_T.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/NMDA_Mg_T.c Notice: Use of POINTER is not thread safe. Thread Safe NEURON's CVode method ignores conservation -> NMODL ../mech//OUClamp2.mod Notice: Assignment to the GLOBAL variable, "rmd2u", is not thread safe Notice: Assignment to the GLOBAL variable, "rmd2b", is not thread safe Notice: Assignment to the GLOBAL variable, "rmd1u", is not thread safe Notice: Assignment to the GLOBAL variable, "rmd1b", is not thread safe Translating OUClamp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/OUClamp.c Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: This mechanism cannot be used with CVODE -> NMODL ../mech//OUConductance.mod Translating OUClamp2.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/OUClamp2.c -> NMODL ../mech//OUReversal.mod Translating OUConductance.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/OUConductance.c Thread Safe Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: This mechanism cannot be used with CVODE Translating OUReversal.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/OUReversal.c Notice: set_seed is not thread safe Notice: normrand is not thread safe Notice: This mechanism cannot be used with CVODE -> NMODL ../mech//Shunt.mod -> NMODL ../mech//SinClamp.mod -> NMODL ../mech//VecStim.mod Translating SinClamp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/SinClamp.c Translating Shunt.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/Shunt.c Translating VecStim.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/VecStim.c Notice: VERBATIM blocks are not thread safe Thread Safe Thread Safe -> NMODL ../mech//conc_ca.mod -> NMODL ../mech//WNClamp.mod -> NMODL ../mech//conc_ca_.mod Translating conc_ca.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/conc_ca.c Translating WNClamp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/WNClamp.c Translating conc_ca_.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/conc_ca_.c Thread Safe Thread Safe Thread Safe -> NMODL ../mech//double_exp_AMPA_NMDA.mod -> NMODL ../mech//conc_ca__.mod -> NMODL ../mech//double_exp_AMPA_NMDA_modified.mod Translating double_exp_AMPA_NMDA.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/double_exp_AMPA_NMDA.c Translating conc_ca__.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/conc_ca__.c Translating double_exp_AMPA_NMDA_modified.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/double_exp_AMPA_NMDA_modified.c Thread Safe Thread Safe Thread Safe -> NMODL ../mech//double_exp_AMPA_NMDA_modified2.mod -> NMODL ../mech//double_exp_AMPA_NMDA_rescaled.mod -> NMODL ../mech//double_exp_AMPA_NMDA_rescaled_prox.mod Translating double_exp_AMPA_NMDA_modified2.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/double_exp_AMPA_NMDA_modified2.c Translating double_exp_AMPA_NMDA_rescaled.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/double_exp_AMPA_NMDA_rescaled.c Thread Safe Translating double_exp_AMPA_NMDA_rescaled_prox.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/double_exp_AMPA_NMDA_rescaled_prox.c Thread Safe -> NMODL ../mech//double_exp_AMPA_NMDA_v_from_vector.mod -> NMODL ../mech//epsc_double_exp.mod Thread Safe -> NMODL ../mech//exp_AMPA_NMDA.mod Translating double_exp_AMPA_NMDA_v_from_vector.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/double_exp_AMPA_NMDA_v_from_vector.c Translating epsc_double_exp.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/epsc_double_exp.c Thread Safe Thread Safe -> NMODL ../mech//gap.mod Translating exp_AMPA_NMDA.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/exp_AMPA_NMDA.c -> NMODL ../mech//rel.mod Thread Safe -> NMODL ../mech//release_BMK.mod Translating gap.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/gap.c Notice: Use of POINTER is not thread safe. Translating rel.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/rel.c -> Compiling CaDyn.c Thread Safe -> Compiling CaPump.c -> Compiling IKv3_1.c Translating release_BMK.mod into /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64/release_BMK.c Thread Safe -> Compiling INa_Ta.c -> Compiling ISK.c -> Compiling ITestChannel.c -> Compiling Ih.c -> Compiling ITestChannel2.c -> Compiling NMDA_Mg_T.c -> Compiling OUClamp.c -> Compiling OUClamp2.c -> Compiling OUConductance.c -> Compiling OUReversal.c -> Compiling Shunt.c -> Compiling SinClamp.c -> Compiling VecStim.c -> Compiling WNClamp.c -> Compiling conc_ca.c -> Compiling conc_ca_.c -> Compiling conc_ca__.c -> Compiling double_exp_AMPA_NMDA.c -> Compiling double_exp_AMPA_NMDA_modified.c -> Compiling double_exp_AMPA_NMDA_modified2.c -> Compiling double_exp_AMPA_NMDA_rescaled.c -> Compiling double_exp_AMPA_NMDA_rescaled_prox.c -> Compiling double_exp_AMPA_NMDA_v_from_vector.c -> Compiling epsc_double_exp.c -> Compiling exp_AMPA_NMDA.c -> Compiling gap.c -> Compiling rel.c -> Compiling release_BMK.c => LINKING shared library ./libnrnmech.so => LINKING executable ./special LDFLAGS are: -lreadline -lcurses -lform -lpython3.13 -lX11 -lXext Successfully created riscv64/special --- writing channels from /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/channels/channelcollection/ to /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ Reading channels from: __init__ Reading channels from: channelcollection - write .mod file for: Kv3_1 - write .mod file for: Na_Ta - write .mod file for: SK - write .mod file for: TestChannel - write .mod file for: TestChannel2 - write .mod file for: h + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib/python3.13/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=4 + /usr/bin/pytest ../ ============================= test session starts ============================== platform linux -- Python 3.13.0b4, pytest-7.4.3, pluggy-1.3.0 rootdir: /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 collected 80 items ../tests/test_cnet.py ..... [ 6%] ../tests/test_compartmentfitter.py .......... [ 18%] ../tests/test_compartmenttree.py ......... [ 30%] ../tests/test_greenstree.py .. [ 32%] ../tests/test_ionchannels.py .... [ 37%] ../tests/test_morphtree.py .................. [ 60%] ../tests/test_net.py ..... [ 66%] ../tests/test_neurontree.py ....... [ 75%] ../tests/test_phystree.py .... [ 80%] ../tests/test_sovtree.py ... [ 83%] ../tests/test_stree.py ............. [100%] =============================== warnings summary =============================== tests/test_cnet.py: 1 warning tests/test_compartmentfitter.py: 70 warnings tests/test_neurontree.py: 240 warnings /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/neuronmodel.py:763: DeprecationWarning: neuron.run(tstop) is deprecated; use h.stdinit() and h.continuerun(tstop) instead neuron.run(t_max + self.t_calibrate) tests/test_ionchannels.py::TestChannels::testBasic /usr/lib/python3.13/site-packages/_pytest/python.py:194: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. result = testfunction(**testargs) tests/test_net.py::TestNET::testKernels /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/lib64/python3.13/site-packages/neat/trees/netree.py:155: RuntimeWarning: invalid value encountered in divide return np.sum(self.c[:,None]*1e3 / (self.a[:,None]*1e3 + s_arr[None,:]), 0) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================ 80 passed, 313 warnings in 1605.14s (0:26:45) ================= ~/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2 + popd + rm -rf find /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/CaDyn.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/CaPump.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/IKv3_1.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/INa_Ta.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ISK.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ITestChannel.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/ITestChannel2.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/Ih.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/NMDA_Mg_T.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUClamp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUClamp2.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUConductance.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/OUReversal.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/Shunt.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/SinClamp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/VecStim.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/WNClamp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/conc_ca.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/conc_ca_.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/conc_ca__.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_modified.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_modified2.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_rescaled.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_rescaled_prox.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/double_exp_AMPA_NMDA_v_from_vector.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/epsc_double_exp.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/exp_AMPA_NMDA.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/gap.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/rel.mod /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/mech/release_BMK.mod + rm -rf find /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT//usr/lib64/python3.13/site-packages/neat/tools/simtools/neuron/riscv64 + RPM_EC=0 ++ jobs -p + exit 0 Processing files: python3-neatdend-0.9.2-19.fc41.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.fpIb3B + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + cd NEAT-0.9.2 + DOCDIR=/builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/README.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/CODE_OF_CONDUCT.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/CONTRIBUTING.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + cp -pr /builddir/build/BUILD/python-neatdend-0.9.2-build/NEAT-0.9.2/CONTRIBUTORS.rst /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT/usr/share/doc/python3-neatdend + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-neatdend = 0.9.2-19.fc41 python3-neatdend = 0.9.2-19.fc41 python3-neatdend(riscv-64) = 0.9.2-19.fc41 python3.13-neatdend = 0.9.2-19.fc41 python3.13dist(neatdend) = 0.9.1 python3dist(neatdend) = 0.9.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.13 python3.13dist(cython) >= 3 python3.13dist(matplotlib) >= 3.4.1 python3.13dist(numpy) >= 1.20.2 python3.13dist(pytest) >= 5.3.2 python3.13dist(scikit-learn) >= 0.24.2 python3.13dist(scipy) >= 1.6.3 python3.13dist(sympy) >= 1.7.1 rtld(GNU_HASH) Processing files: python-neatdend-debugsource-0.9.2-19.fc41.riscv64 Provides: python-neatdend-debugsource = 0.9.2-19.fc41 python-neatdend-debugsource(riscv-64) = 0.9.2-19.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-neatdend-debuginfo-0.9.2-19.fc41.riscv64 Provides: debuginfo(build-id) = 26234713cd3a699981e89a12aea27106ee3e3576 python-neatdend-debuginfo = 0.9.2-19.fc41 python3-neatdend-debuginfo = 0.9.2-19.fc41 python3-neatdend-debuginfo(riscv-64) = 0.9.2-19.fc41 python3.13-neatdend-debuginfo = 0.9.2-19.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: python-neatdend-debugsource(riscv-64) = 0.9.2-19.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/python-neatdend-0.9.2-build/BUILDROOT Wrote: /builddir/build/SRPMS/python-neatdend-0.9.2-19.fc41.src.rpm Wrote: /builddir/build/RPMS/python-neatdend-debugsource-0.9.2-19.fc41.riscv64.rpm Wrote: /builddir/build/RPMS/python3-neatdend-debuginfo-0.9.2-19.fc41.riscv64.rpm Wrote: /builddir/build/RPMS/python3-neatdend-0.9.2-19.fc41.riscv64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Ciso5E + umask 022 + cd /builddir/build/BUILD/python-neatdend-0.9.2-build + test -d /builddir/build/BUILD/python-neatdend-0.9.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/python-neatdend-0.9.2-build + rm -rf /builddir/build/BUILD/python-neatdend-0.9.2-build + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0