Mock Version: 1.4.14 Mock Version: 1.4.14 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'], chrootPath='/var/lib/mock/f31-build-100285-33241/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False BUILDSTDERR: sh: perl: command not found BUILDSTDERR: sh: python3-config: command not found BUILDSTDERR: sh: python3-config: command not found Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1564012800 Wrote: /builddir/build/SRPMS/libsedml-0.4.4-5.fc31.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'], chrootPath='/var/lib/mock/f31-build-100285-33241/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1564012800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.5a3lfX + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSEDML-0.4.4 + /usr/bin/gzip -dc /builddir/build/SOURCES/libSEDML-0.4.4.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libSEDML-0.4.4 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/patch -p0 -s --fuzz=0 --no-backup-if-mismatch + /usr/bin/cat /builddir/build/SOURCES/libsedml-fix_install_libpaths.patch + /usr/bin/cat /builddir/build/SOURCES/libsedml-fix_string_format.patch + /usr/bin/patch -p0 -s --fuzz=0 --no-backup-if-mismatch + sed -e 's| lib/cmake | lib64/cmake |g' -i CMakeLists.txt + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBNUML.cmake + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBSBML.cmake + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.CuKp0W + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + mkdir build + pushd build + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread' + export LDFLAGS BUILDSTDERR: ++ pkg-config --cflags libxml-2.0 + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.7m -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.7m.so -DWITH_JAVA:BOOL=ON -DWITH_SWIG:BOOL=ON -DWITH_PERL:BOOL=ON -DWITH_RUBY:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 ' -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES .. ~/build/BUILD/libSEDML-0.4.4/build ~/build/BUILD/libSEDML-0.4.4 -- The C compiler identification is GNU 9.1.1 -- The CXX compiler identification is GNU 9.1.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compile features -- Detecting C compile features - done -- Looking for sbml-static -- Found LIBSBML: sbml-static -- Looking for numl-static -- Found LIBNUML: numl-static -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Found SWIG: /usr/bin/swig (found version "4.0.0") -- Found JNI: /usr/lib/jvm/java/jre/lib/riscv64/libjawt.so -- Found Java: /usr/bin/java (found version "1.8.0.212") found components: Development -- Found PythonInterp: /usr/bin/python3 (found version "3.7.4") -- Found PythonLibs: /usr/lib64/libpython3.7m.so (found version "3.7.4") -- Found Perl: /usr/bin/perl (found version "5.30.0") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.30.0") -- Found Ruby: /usr/bin/ruby (found version "2.5.1") -- ---------------------------------------------------------------------- libSEDML version 0.4.4 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 5.2.0-0.rc7.git0.1.0.riscv64.fc31.riscv64 host CPU architecture = riscv64 General build flags: CC = /usr/bin/cc CXX = /usr/bin/c++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="0.4.4" -DPACKAGE_NAME="libsedml" CFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread BUILDSTDERR: SBML library configurationCMake Warning: BUILDSTDERR: Manually-specified variables were not used by the project: BUILDSTDERR: CMAKE_Fortran_FLAGS_RELEASE BUILDSTDERR: CMAKE_SKIP_INSTALL_RPATH BUILDSTDERR: CSHARP_COMPILER BUILDSTDERR: INCLUDE_INSTALL_DIR BUILDSTDERR: LIBSBML_STATIC BUILDSTDERR: LIB_INSTALL_DIR BUILDSTDERR: LIB_SUFFIX BUILDSTDERR: SHARE_INSTALL_PREFIX BUILDSTDERR: SYSCONF_INSTALL_DIR + make -j1 : SBML library = /usr/lib64/libsbml.so SBML include = -I/usr/include NUML library configuration: NUML library = /lib64/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig -- Using Java = /usr/bin/java -- Using Python = /usr/bin/python3 -- Using Perl = /usr/bin/perl -- Using Ruby = /usr/bin/ruby -- Using libcheck = /usr/lib64/libcheck.so -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/libSEDML-0.4.4/build /usr/bin/cmake -S/builddir/build/BUILD/libSEDML-0.4.4 -B/builddir/build/BUILD/libSEDML-0.4.4/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/sedml /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/sedml /builddir/build/BUILD/libSEDML-0.4.4/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= Scanning dependencies of target sedml-static make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 0%] Building CXX object sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/common/libsedml-version.cpp [ 1%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAddXML.cpp [ 2%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] BUILDSTDERR: 1985 | bool sedmlDeclared = false; BUILDSTDERR: | ^~~~~~~~~~~~~ DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithm.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithmParameter.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp [ 4%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChange.cpp [ 5%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeAttribute.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeXML.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedComputeChange.cpp [ 7%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedConstructorException.cpp [ 8%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedCurve.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: 1330 | bool assigned = false; BUILDSTDERR: | ^~~~~~~~ -0.4.4/sedml/SedDataDescription.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataGenerator.cpp [ 10%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSet.cpp [ 11%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSource.cpp [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedError.cpp [ 13%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedErrorLog.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedFunctionalRange.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedListOf.cpp [ 15%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedModel.cpp [ 16%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-u/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: 514 | bool assigned = false; BUILDSTDERR: | ^~~~~~~~ nwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedNamespaces.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOneStep.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOutput.cpp [ 18%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedParameter.cpp [ 19%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot3D.cpp [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRange.cpp [ 21%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReader.cpp [ 22%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRemoveXML.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRepeatedTask.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: 262 | const string& name = stream.peek().getName(); BUILDSTDERR: | ^~~~ -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReport.cpp [ 24%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSetValue.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSimulation.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp [ 26%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSteadyState.cpp [ 27%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTI/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: 376 | const string& name = stream.peek().getName(); BUILDSTDERR: | ^~~~ FY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSubTask.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSurface.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp [ 29%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTypeCodes.cpp [ 30%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformRange.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformTimeCourse.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVariable.cpp [ 32%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVectorRange.cpp [ 33%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVisitor.cpp [ 34%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedWriter.cpp [ 34%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml-static.dir/SedBase.cpp.o CMakeFiles/sedml-static.dir/SedChange.cpp.o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o CMakeFiles/sedml-static.dir/SedCurve.cpp.o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o CMakeFiles/sedml-static.dir/SedDocument.cpp.o CMakeFiles/sedml-static.dir/SedError.cpp.o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml-static.dir/SedListOf.cpp.o CMakeFiles/sedml-static.dir/SedModel.cpp.o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o CMakeFiles/sedml-static.dir/SedOutput.cpp.o CMakeFiles/sedml-static.dir/SedParameter.cpp.o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o CMakeFiles/sedml-static.dir/SedRange.cpp.o CMakeFiles/sedml-static.dir/SedReader.cpp.o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml-static.dir/SedReport.cpp.o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o CMakeFiles/sedml-static.dir/SedSlice.cpp.o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o CMakeFiles/sedml-static.dir/SedSurface.cpp.o CMakeFiles/sedml-static.dir/SedTask.cpp.o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml-static.dir/SedVariable.cpp.o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o CMakeFiles/sedml-static.dir/SedWriter.cpp.o /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 34%] Built target sedml-static make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/sedml /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/sedml /builddir/build/BUILD/libSEDML-0.4.4/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= Scanning dependencies of target sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 35%] Building CXX object sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/common/libsedml-version.cpp BUILDSTDERR: [ 36%] Bu/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] BUILDSTDERR: 1985 | bool sedmlDeclared = false; BUILDSTDERR: | ^~~~~~~~~~~~~ ilding CXX object sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAddXML.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithm.cpp [ 37%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithmParameter.cpp [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChange.cpp [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeAttribute.cpp [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeXML.cpp [ 41%] Building CXX object sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedComputeChange.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedConstructorException.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedCurve.cpp [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataDescription.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataGenerator.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSet.cpp [ 45%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSource.cpp [ 46%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libS/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: 1330 | bool assigned = false; BUILDSTDERR: | ^~~~~~~~ EDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedError.cpp [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedErrorLog.cpp [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedFunctionalRange.cpp [ 49%] Building CXX object sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedListOf.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedModel.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedNamespaces.cpp [ 51%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOneStep.cpp [ 52%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOutput.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] BUILDSTDERR: 514 | bool assigned = false; BUILDSTDERR: | ^~~~~~~~ -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedParameter.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp [ 54%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot3D.cpp [ 55%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRange.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReader.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRemoveXML.cpp [ 57%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRepeatedTask.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReport.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSetValue.cpp [ 59%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSimulation.cpp [ 60%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-/builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: 262 | const string& name = stream.peek().getName(); BUILDSTDERR: | ^~~~ 0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSteadyState.cpp [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSubTask.cpp [ 62%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSurface.cpp [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTask.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] BUILDSTDERR: 376 | const string& name = stream.peek().getName(); BUILDSTDERR: | ^~~~ -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTypeCodes.cpp [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformRange.cpp [ 65%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformTimeCourse.cpp [ 66%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVariable.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVectorRange.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVisitor.cpp [ 68%] Building CXX object sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/c++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedWriter.cpp [ 69%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 BUILDSTDERR: /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,libsedml.so.0 -o libsedml.so.0.4.4 CMakeFiles/sedml.dir/common/libsedml-version.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /SedSetValue.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.0.4.4 libsedml.so.0 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 69%] Built target sedml make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Swig Java source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/java-files/org/sedml/libsedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java -I/usr/include/ -I/usr/include/ -c++ -java -package org.sedml.libsedml -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -outdir /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/java-files/org/sedml/libsedml -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../swig/libsedml.i make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Built target binding_java_swig make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_jar make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Building: libsedml.jar BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.4/build/bindiCreating: libsedml.jar BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings ngs/java/test cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -DJava_JAVAC_EXECUTABLE="/usr/bin/javac" -DJava_JAR_EXECUTABLE="/usr/bin/jar" -DBIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java" -DSRC_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.4/bindings/java" -DFILE_SEP=":" -DPATH_SEP=/ -P /builddir/build/BUILD/libSEDML-0.4.4/bindings/java/compile-native-files.cmake added manifest adding: org/sedml/libsedml/ASTNode.class(in = 16585) (out= 4860)(deflated 70%) adding: org/sedml/libsedml/ASTNodeList.class(in = 1542) (out= 712)(deflated 53%) adding: org/sedml/libsedml/AtomicDescription.class(in = 2776) (out= 1080)(deflated 61%) adding: org/sedml/libsedml/AtomicValue.class(in = 2512) (out= 1048)(deflated 58%) adding: org/sedml/libsedml/CVTerm.class(in = 4674) (out= 1649)(deflated 64%) adding: org/sedml/libsedml/CVTermList.class(in = 1524) (out= 713)(deflated 53%) adding: org/sedml/libsedml/CompositeDescription.class(in = 4937) (out= 1537)(deflated 68%) adding: org/sedml/libsedml/CompositeValue.class(in = 5054) (out= 1642)(deflated 67%) adding: org/sedml/libsedml/Date.class(in = 4765) (out= 1781)(deflated 62%) adding: org/sedml/libsedml/DateList.class(in = 1488) (out= 709)(deflated 52%) adding: org/sedml/libsedml/Dimension.class(in = 3157) (out= 1208)(deflated 61%) adding: org/sedml/libsedml/DimensionDescription.class(in = 3942) (out= 1334)(deflated 66%) adding: org/sedml/libsedml/DoubleStdVector.class(in = 4379) (out= 1756)(deflated 59%) adding: org/sedml/libsedml/L3ParserSettings.class(in = 5557) (out= 1723)(deflated 68%) adding: org/sedml/libsedml/MathML.class(in = 1254) (out= 661)(deflated 47%) adding: org/sedml/libsedml/Model.class(in = 37837) (out= 9568)(deflated 74%) adding: org/sedml/libsedml/ModelCreatorList.class(in = 1641) (out= 726)(deflated 55%) adding: org/sedml/libsedml/NMBase.class(in = 8128) (out= 2446)(deflated 69%) adding: org/sedml/libsedml/NUMLConstructorException.class(in = 907) (out= 533)(deflated 41%) adding: org/sedml/libsedml/NUMLDocument.class(in = 5377) (out= 1844)(deflated 65%) adding: org/sedml/libsedml/NUMLError.class(in = 2275) (out= 974)(deflated 57%) adding: org/sedml/libsedml/NUMLErrorLog.class(in = 3518) (out= 1259)(deflated 64%) adding: org/sedml/libsedml/NUMLList.class(in = 3371) (out= 1277)(deflated 62%) adding: org/sedml/libsedml/NUMLNamespaces.class(in = 2601) (out= 1039)(deflated 60%) adding: org/sedml/libsedml/NUMLReader.class(in = 1654) (out= 800)(deflated 51%) adding: org/sedml/libsedml/NUMLWriter.class(in = 2479) (out= 1000)(deflated 59%) adding: org/sedml/libsedml/OFStream.class(in = 1712) (out= 794)(deflated 53%) adding: org/sedml/libsedml/ONTOLOGY.class(in = 1578) (out= 742)(deflated 52%) adding: org/sedml/libsedml/OStream.class(in = 1404) (out= 751)(deflated 46%) adding: org/sedml/libsedml/OStringStream.class(in = 1247) (out= 646)(deflated 48%) adding: org/sedml/libsedml/OntologyTerm.class(in = 3203) (out= 1184)(deflated 63%) adding: org/sedml/libsedml/OntologyTerms.class(in = 2231) (out= 943)(deflated 57%) adding: org/sedml/libsedml/ResultComponent.class(in = 5580) (out= 1750)(deflated 68%) adding: org/sedml/libsedml/ResultComponents.class(in = 2478) (out= 986)(deflated 60%) adding: org/sedml/libsedml/SBMLNamespaces.class(in = 5735) (out= 1809)(deflated 68%) adding: org/sedml/libsedml/SBase.class(in = 20837) (out= 5678)(deflated 72%) adding: org/sedml/libsedml/SBaseList.class(in = 1506) (out= 711)(deflated 52%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTBasePlugin.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTNodeType_t.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AlgebraicRule.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AssignmentRule.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Compartment.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_CompartmentType.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Constraint.class(in = 454) (out= 297)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Delay.class(in = 439) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ElementFilter.class(in = 463) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Event.class(in = 439) (out= 291)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_EventAssignment.class(in = 469) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_FormulaUnitsData.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_FunctionDefinition.class(in = 478) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_IdList.class(in = 442) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_IdentifierTransformer.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_InitialAssignment.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_KineticLaw.class(in = 454) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_L3ParserSettings_t.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_List.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartmentTypes.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartments.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfConstraints.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfEvents.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfFunctionDefinitions.class(in = 499) (out= 308)(deflated 38%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfInitialAssignments.class(in = 496) (out= 308)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfParameters.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfReactions.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfRules.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpecies.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpeciesTypes.class(in = 478) (out= 305)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfUnitDefinitions.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_LocalParameter.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelCreator.class(in = 460) (out= 297)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelHistory.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Model_t.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ModifierSpeciesReference.class(in = 496) (out= 309)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_NUMLDocument_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Parameter.class(in = 451) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_RateRule.class(in = 448) (out= 296)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_Reaction.class(in = 448) (out= 295)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Rule.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLDocument.class(in = 460) (out= 300)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLNamespaces_t.class(in = 472) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_SBasePlugin.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Species.class(in = 445) (out= 293)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesReference.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesType.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_StringBuffer_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Trigger.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Unit.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_UnitDefinition.class(in = 466) (out= 298)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_XMLNamespaces_t.class(in = 469) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_NUMLError_t.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_SedError_t.class(in = 487) (out= 306)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_std__ostream.class(in = 460) (out= 298)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_void.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SedAddXML.class(in = 3052) (out= 1180)(deflated 61%) adding: org/sedml/libsedml/SedAlgorithm.class(in = 5218) (out= 1679)(deflated 67%) adding: org/sedml/libsedml/SedAlgorithmParameter.class(in = 3901) (out= 1323)(deflated 66%) adding: org/sedml/libsedml/SedBase.class(in = 11106) (out= 3183)(deflated 71%) adding: org/sedml/libsedml/SedBaseList.class(in = 1542) (out= 713)(deflated 53%) adding: org/sedml/libsedml/SedChange.class(in = 2976) (out= 1161)(deflated 60%) adding: org/sedml/libsedml/SedChangeAttribute.class(in = 3139) (out= 1143)(deflated 63%) adding: org/sedml/libsedml/SedChangeXML.class(in = 3130) (out= 1183)(deflated 62%) adding: org/sedml/libsedml/SedComputeChange.class(in = 6494) (out= 1979)(deflated 69%) adding: org/sedml/libsedml/SedConstructorException.class(in = 1814) (out= 799)(deflated 55%) adding: org/sedml/libsedml/SedCurve.class(in = 6857) (out= 2133)(deflated 68%) adding: org/sedml/libsedml/SedDataDescription.class(in = 7186) (out= 2095)(deflated 70%) adding: org/sedml/libsedml/SedDataGenerator.class(in = 7332) (out= 2183)(deflated 70%) adding: org/sedml/libsedml/SedDataSet.class(in = 4044) (out= 1427)(deflated 64%) adding: org/sedml/libsedml/SedDataSource.class(in = 5443) (out= 1774)(deflated 67%) adding: org/sedml/libsedml/SedDocument.class(in = 13881) (out= 3844)(deflated 72%) adding: org/sedml/libsedml/SedError.class(in = 2506) (out= 984)(deflated 60%) adding: org/sedml/libsedml/SedErrorLog.class(in = 6205) (out= 1821)(deflated 70%) adding: org/sedml/libsedml/SedErrorStdVector.class(in = 4663) (out= 1747)(deflated 62%) adding: org/sedml/libsedml/SedFunctionalRange.class(in = 7080) (out= 2102)(deflated 70%) adding: org/sedml/libsedml/SedListOf.class(in = 4476) (out= 1571)(deflated 64%) adding: org/sedml/libsedml/SedListOfAlgorithmParameters.class(in = 3747) (out= 1231)(deflated 67%) adding: org/sedml/libsedml/SedListOfChanges.class(in = 4289) (out= 1499)(deflated 65%) adding: org/sedml/libsedml/SedListOfCurves.class(in = 3253) (out= 1202)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataDescriptions.class(in = 3633) (out= 1222)(deflated 66%) adding: org/sedml/libsedml/SedListOfDataGenerators.class(in = 3557) (out= 1218)(deflated 65%) adding: org/sedml/libsedml/SedListOfDataSets.class(in = 3329) (out= 1208)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataSources.class(in = 3443) (out= 1210)(deflated 64%) adding: org/sedml/libsedml/SedListOfFunctionalRanges.class(in = 3633) (out= 1219)(deflated 66%) adding: org/sedml/libsedml/SedListOfModels.class(in = 3253) (out= 1202)(deflated 63%) adding: org/sedml/libsedml/SedListOfOutputs.class(in = 3797) (out= 1373)(deflated 63%) adding: org/sedml/libsedml/SedListOfParameters.class(in = 3405) (out= 1210)(deflated 64%) adding: org/sedml/libsedml/SedListOfRanges.class(in = 3824) (out= 1375)(deflated 64%) adding: org/sedml/libsedml/SedListOfSimulations.class(in = 3997) (out= 1391)(deflated 65%) adding: org/sedml/libsedml/SedListOfSlices.class(in = 3253) (out= 1202)(deflated 63%) adding: org/sedml/libsedml/SedListOfSubTasks.class(in = 3329) (out= 1207)(deflated 63%) adding: org/sedml/libsedml/SedListOfSurfaces.class(in = 3329) (out= 1206)(deflated 63%) adding: org/sedml/libsedml/SedListOfTaskChanges.class(in = 3419) (out= 1211)(deflated 64%) adding: org/sedml/libsedml/SedListOfTasks.class(in = 3475) (out= 1290)(deflated 62%) adding: org/sedml/libsedml/SedListOfVariables.class(in = 3367) (out= 1201)(deflated 64%) adding: org/sedml/libsedml/SedModel.class(in = 6561) (out= 2165)(deflated 67%) adding: org/sedml/libsedml/SedNamespaces.class(in = 3807) (out= 1367)(deflated 64%) adding: org/sedml/libsedml/SedNamespacesList.class(in = 1650) (out= 720)(deflated 56%) adding: org/sedml/libsedml/SedOneStep.class(in = 2913) (out= 1157)(deflated 60%) adding: org/sedml/libsedml/SedOutput.class(in = 3554) (out= 1330)(deflated 62%) adding: org/sedml/libsedml/SedParameter.class(in = 3773) (out= 1365)(deflated 63%) adding: org/sedml/libsedml/SedPlot2D.class(in = 4846) (out= 1673)(deflated 65%) adding: org/sedml/libsedml/SedPlot3D.class(in = 4133) (out= 1472)(deflated 64%) adding: org/sedml/libsedml/SedRange.class(in = 2914) (out= 1155)(deflated 60%) adding: org/sedml/libsedml/SedReader.class(in = 1647) (out= 794)(deflated 51%) adding: org/sedml/libsedml/SedRemoveXML.class(in = 2500) (out= 1034)(deflated 58%) adding: org/sedml/libsedml/SedRepeatedTask.class(in = 8699) (out= 2551)(deflated 70%) adding: org/sedml/libsedml/SedReport.class(in = 4133) (out= 1472)(deflated 64%) adding: org/sedml/libsedml/SedSetValue.class(in = 7908) (out= 2373)(deflated 69%) adding: org/sedml/libsedml/SedSimulation.class(in = 4505) (out= 1551)(deflated 65%) adding: org/sedml/libsedml/SedSlice.class(in = 3496) (out= 1312)(deflated 62%) adding: org/sedml/libsedml/SedSteadyState.class(in = 2546) (out= 1037)(deflated 59%) adding: org/sedml/libsedml/SedSubTask.class(in = 3312) (out= 1249)(deflated 62%) adding: org/sedml/libsedml/SedSurface.class(in = 3385) (out= 1269)(deflated 62%) adding: org/sedml/libsedml/SedTask.class(in = 4382) (out= 1524)(deflated 65%) adding: org/sedml/libsedml/SedUniformRange.class(in = 4402) (out= 1489)(deflated 66%) adding: org/sedml/libsedml/SedUniformTimeCourse.class(in = 4738) (out= 1505)(deflated 68%) adding: org/sedml/libsedml/SedVariable.class(in = 4916) (out= 1602)(deflated 67%) adding: org/sedml/libsedml/SedVectorRange.class(in = 3456) (out= 1282)(deflated 62%) adding: org/sedml/libsedml/SedWriter.class(in = 2686) (out= 1052)(deflated 60%) adding: org/sedml/libsedml/Tuple.class(in = 3012) (out= 1200)(deflated 60%) adding: org/sedml/libsedml/TupleDescription.class(in = 3597) (out= 1292)(deflated 64%) adding: org/sedml/libsedml/XMLAttributes.class(in = 6722) (out= 1884)(deflated 71%) adding: org/sedml/libsedml/XMLConstructorException.class(in = 1109) (out= 615)(deflated 44%) adding: org/sedml/libsedml/XMLError.class(in = 4368) (out= 1613)(deflated 63%) adding: org/sedml/libsedml/XMLErrorLog.class(in = 4236) (out= 1505)(deflated 64%) adding: org/sedml/libsedml/XMLInputStream.class(in = 4641) (out= 1516)(deflated 67%) adding: org/sedml/libsedml/XMLNamespaces.class(in = 4087) (out= 1399)(deflated 65%) adding: org/sedml/libsedml/XMLNode.class(in = 8076) (out= 2346)(deflated 70%) adding: org/sedml/libsedml/XMLOutputStream.class(in = 9090) (out= 2468)(deflated 72%) adding: org/sedml/libsedml/XMLOwningOutputFileStream.class(in = 1951) (out= 758)(deflated 61%) adding: org/sedml/libsedml/XMLOwningOutputStringStream.class(in = 1659) (out= 707)(deflated 57%) adding: org/sedml/libsedml/XMLToken.class(in = 12891) (out= 3303)(deflated 74%) adding: org/sedml/libsedml/XMLTriple.class(in = 2398) (out= 1032)(deflated 56%) adding: org/sedml/libsedml/XmlErrorStdVector.class(in = 4711) (out= 1786)(deflated 62%) adding: org/sedml/libsedml/libsedml.class(in = 11526) (out= 3901)(deflated 66%) adding: org/sedml/libsedml/libsedmlConstants.class(in = 35668) (out= 11351)(deflated 68%) adding: org/sedml/libsedml/libsedmlJNI.class(in = 165676) (out= 33194)(deflated 79%) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 71%] Built target binding_java_jar make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 71%] Building CXX object bindings/java/CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_java_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../swig -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/libsedml_wrap.cpp [ 72%] Linking CXX shared library libsedmlj.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_java_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,libsedmlj.so -o libsedmlj.so CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 73%] Built target binding_java_lib make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Swig Python source BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: Python: Add Version to generated file /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/libsedml.i cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python" -DVERSION="0.4.4" -P /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/add_version.cmake make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Built target binding_python_swig make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Building CXX object bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../swig -I/usr/include/python3.7m -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/libsedml_wrap.cpp [ 75%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lpython3.7m /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 76%] Built target binding_python_lib make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= BUILDSTDERR: Scan/usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. ning dependencies of target binding_perl_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 77%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/libsedml.i make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 77%] Built target binding_perl_swig make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 78%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/libsedml.i [ 78%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML.cpp BUILDSTDERR: [ 79%] Linking CXX shared /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 79%] Built target binding_perl_lib make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 80%] Swig Ruby source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby -I/usr/include/ -I/usr/include/ -c++ -ruby -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/libsedml.i make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 80%] Built target binding_ruby_swig make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 81%] Building CXX object bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__slice(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4812:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 4812 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__delete_at(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4858:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 4858 | catch (std::out_of_range) BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__at(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4868:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 4868 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_0(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4890:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 4890 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_1(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4899:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 4899 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5287:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5287 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__delete_at(std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5333:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5333 | catch (std::out_of_range) BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__at(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5343:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5343 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5365:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5365 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5374:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5374 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5669:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5669 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__delete_at(std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5715:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5715 | catch (std::out_of_range) BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__at(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5725:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5725 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5747:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5747 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5756:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5756 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5997:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 5997 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__delete_at(std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6043:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 6043 | catch (std::out_of_range) BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__at(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6053:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 6053 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6075:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 6075 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6084:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] BUILDSTDERR: 6084 | catch( std::out_of_range ) { BUILDSTDERR: | ^~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4810:127: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4933:131: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5285:100: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5408:104: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5667:107: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5790:111: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5995:104: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6118:108: required from here BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] BUILDSTDERR: 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); BUILDSTDERR: | ~~^~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_matchesSedNamespaces(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1379:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 1379 | #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: | ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:24820:9: note: 'argv[1]' was declared here BUILDSTDERR: 24820 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_matchesRequiredSedNamespacesForAddition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1379:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 1379 | #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: | ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:24933:9: note: 'argv[1]' was declared here BUILDSTDERR: 24933 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesSBMLNamespaces(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1379:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 1379 | #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: | ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:92990:9: note: 'argv[1]' was declared here BUILDSTDERR: 92990 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_matchesRequiredSBMLNamespacesForAddition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1379:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 1379 | #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: | ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:93103:9: note: 'argv[1]' was declared here BUILDSTDERR: 93103 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NUMLErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1379:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 1379 | #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: | ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:137220:9: note: 'argv[1]' was declared here BUILDSTDERR: 137220 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ASTNode_setType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5478:29: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 5478 | int res = SWIG_AsVal_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:84373:9: note: 'argv[1]' was declared here BUILDSTDERR: 84373 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Iterator___sub__(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3215:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 3215 | res = SWIG_AsVal_long (obj, val ? &v : 0); BUILDSTDERR: | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:8764:9: note: 'argv[1]' was declared here BUILDSTDERR: 8764 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ConstIterator___sub__(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3215:27: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 3215 | res = SWIG_AsVal_long (obj, val ? &v : 0); BUILDSTDERR: | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:8195:9: note: 'argv[1]' was declared here BUILDSTDERR: 8195 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_TupleDescription_getAtomicDescription(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:135570:9: note: 'argv[1]' was declared here BUILDSTDERR: 135570 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CompositeDescription_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:135036:9: note: 'argv[1]' was declared here BUILDSTDERR: 135036 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Tuple_getAtomicValue(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:133795:9: note: 'argv[1]' was declared here BUILDSTDERR: 133795 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CompositeValue_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:133228:9: note: 'argv[1]' was declared here BUILDSTDERR: 133228 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NUMLList_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:127429:9: note: 'argv[1]' was declared here BUILDSTDERR: 127429 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getNestedCVTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:108003:9: note: 'argv[1]' was declared here BUILDSTDERR: 108003 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getConstraint(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99845:9: note: 'argv[1]' was declared here BUILDSTDERR: 99845 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getDisabledPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:91939:9: note: 'argv[1]' was declared here BUILDSTDERR: 91939 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedErrorLog_getNumFailsWithSeverity(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:29065:9: note: 'argv[1]' was declared here BUILDSTDERR: 29065 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOf_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:31913:9: note: 'argv[1]' was declared here BUILDSTDERR: 31913 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_getResourceURI(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:107387:9: note: 'argv[1]' was declared here BUILDSTDERR: 107387 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_DimensionDescription_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:132608:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 132608 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_DimensionDescription_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:132302:9: note: 'argv[1]' was declared here BUILDSTDERR: 132302 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Dimension_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:131817:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 131817 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Dimension_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:131637:9: note: 'argv[1]' was declared here BUILDSTDERR: 131637 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ResultComponents_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:131120:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 131120 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ResultComponents_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:130940:9: note: 'argv[1]' was declared here BUILDSTDERR: 130940 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_OntologyTerms_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:128950:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 128950 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_OntologyTerms_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:128770:9: note: 'argv[1]' was declared here BUILDSTDERR: 128770 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:126926:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 126926 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:126621:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 126621 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:126373:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 126373 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_NMBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:126254:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 126254 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNode_getChild(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:118160:9: note: 'argv[1]' was declared here BUILDSTDERR: 118160 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLToken_getNamespacePrefix(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:115933:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 115933 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLToken_removeNamespace(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:115687:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 115687 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_getPrefix(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:112522:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 112522 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLNamespaces_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:112220:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 112220 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setBiologicalQualifierType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:107691:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 107691 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_CVTerm_setModelQualifierType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:107603:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 107603 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeEvent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104843:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104843 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeReaction(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104723:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104723 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104532:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104532 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeInitialAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104412:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104412 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104292:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104292 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104172:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104172 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:104052:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 104052 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:103932:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 103932 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeCompartmentType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:103812:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 103812 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeUnitDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:103692:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 103692 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_removeFunctionDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:103572:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 103572 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getEvent(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:100509:9: note: 'argv[1]' was declared here BUILDSTDERR: 100509 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getModifierSpeciesReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:100348:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 100348 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesReference(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:100223:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 100223 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getReaction(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:100038:9: note: 'argv[1]' was declared here BUILDSTDERR: 100038 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99762:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 99762 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99637:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 99637 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRateRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99512:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 99512 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getAssignmentRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99387:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 99387 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRuleByVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99262:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 99262 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getRule(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:99077:9: note: 'argv[1]' was declared here BUILDSTDERR: 99077 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignmentBySymbol(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:98916:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 98916 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getInitialAssignment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:98770:9: note: 'argv[1]' was declared here BUILDSTDERR: 98770 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:98510:9: note: 'argv[1]' was declared here BUILDSTDERR: 98510 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpecies(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:98289:9: note: 'argv[1]' was declared here BUILDSTDERR: 98289 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartment(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:98068:9: note: 'argv[1]' was declared here BUILDSTDERR: 98068 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getSpeciesType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:97847:9: note: 'argv[1]' was declared here BUILDSTDERR: 97847 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getCompartmentType(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:97626:9: note: 'argv[1]' was declared here BUILDSTDERR: 97626 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getUnitDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:97405:9: note: 'argv[1]' was declared here BUILDSTDERR: 97405 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_getFunctionDefinition(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:97184:9: note: 'argv[1]' was declared here BUILDSTDERR: 97184 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:95979:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 95979 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_Model_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:95860:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 95860 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:91796:9: note: 'argv[1]' was declared here BUILDSTDERR: 91796 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_setSBOTerm(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:90713:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 90713 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:90482:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 90482 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:90177:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 90177 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:89853:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 89853 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:89734:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 89734 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementByMetaId(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:87516:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 87516 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SBase_getElementBySId(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:87391:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 87391 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_ASTNode_getPlugin(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:85689:9: note: 'argv[1]' was declared here BUILDSTDERR: 85689 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeOutput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:80082:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 80082 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getOutput(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:79770:9: note: 'argv[1]' was declared here BUILDSTDERR: 79770 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeDataGenerator(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:79577:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 79577 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getDataGenerator(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:79317:9: note: 'argv[1]' was declared here BUILDSTDERR: 79317 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:79132:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 79132 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:78842:9: note: 'argv[1]' was declared here BUILDSTDERR: 78842 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeModel(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:78649:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 78649 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getModel(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:78389:9: note: 'argv[1]' was declared here BUILDSTDERR: 78389 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeSimulation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:78204:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 78204 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getSimulation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:77892:9: note: 'argv[1]' was declared here BUILDSTDERR: 77892 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_removeDataDescription(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:77699:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 77699 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDocument_getDataDescription(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:77439:9: note: 'argv[1]' was declared here BUILDSTDERR: 77439 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeSubTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:76646:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 76646 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getSubTask(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:76386:9: note: 'argv[1]' was declared here BUILDSTDERR: 76386 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeTaskChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:76201:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 76201 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getTaskChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:75941:9: note: 'argv[1]' was declared here BUILDSTDERR: 75941 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_removeRange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:75756:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 75756 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedRepeatedTask_getRange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:75444:9: note: 'argv[1]' was declared here BUILDSTDERR: 75444 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTasks_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:74703:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 74703 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTasks_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:74413:9: note: 'argv[1]' was declared here BUILDSTDERR: 74413 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTaskChanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:72296:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 72296 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfTaskChanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:72036:9: note: 'argv[1]' was declared here BUILDSTDERR: 72036 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:71520:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 71520 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:71260:9: note: 'argv[1]' was declared here BUILDSTDERR: 71260 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:71075:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 71075 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedSetValue_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:70815:9: note: 'argv[1]' was declared here BUILDSTDERR: 70815 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSubTasks_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:69749:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 69749 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSubTasks_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:69489:9: note: 'argv[1]' was declared here BUILDSTDERR: 69489 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfFunctionalRanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:68470:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 68470 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfFunctionalRanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:68210:9: note: 'argv[1]' was declared here BUILDSTDERR: 68210 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:67694:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 67694 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:67434:9: note: 'argv[1]' was declared here BUILDSTDERR: 67434 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:67249:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 67249 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedFunctionalRange_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:66989:9: note: 'argv[1]' was declared here BUILDSTDERR: 66989 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfRanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:64893:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 64893 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfRanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:64581:9: note: 'argv[1]' was declared here BUILDSTDERR: 64581 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataGenerators_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:63656:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 63656 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataGenerators_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:63396:9: note: 'argv[1]' was declared here BUILDSTDERR: 63396 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:62880:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 62880 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:62620:9: note: 'argv[1]' was declared here BUILDSTDERR: 62620 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:62435:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 62435 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataGenerator_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:62175:9: note: 'argv[1]' was declared here BUILDSTDERR: 62175 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot3D_removeSurface(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:61264:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 61264 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot3D_getSurface(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:61004:9: note: 'argv[1]' was declared here BUILDSTDERR: 61004 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot2D_removeCurve(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:60419:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 60419 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedPlot2D_getCurve(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:60159:9: note: 'argv[1]' was declared here BUILDSTDERR: 60159 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedReport_removeDataSet(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:59366:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 59366 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedReport_getDataSet(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:59106:9: note: 'argv[1]' was declared here BUILDSTDERR: 59106 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfOutputs_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:58588:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 58588 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfOutputs_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:58276:9: note: 'argv[1]' was declared here BUILDSTDERR: 58276 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSurfaces_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:57195:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 57195 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSurfaces_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:56935:9: note: 'argv[1]' was declared here BUILDSTDERR: 56935 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfCurves_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:55916:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 55916 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfCurves_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:55656:9: note: 'argv[1]' was declared here BUILDSTDERR: 55656 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSets_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:53652:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 53652 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSets_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:53392:9: note: 'argv[1]' was declared here BUILDSTDERR: 53392 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSources_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:52144:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 52144 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataSources_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:51884:9: note: 'argv[1]' was declared here BUILDSTDERR: 51884 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataSource_removeSlice(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:51368:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 51368 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataSource_getSlice(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:51108:9: note: 'argv[1]' was declared here BUILDSTDERR: 51108 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataDescriptions_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:50257:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 50257 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfDataDescriptions_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:49997:9: note: 'argv[1]' was declared here BUILDSTDERR: 49997 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataDescription_removeDataSource(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:49481:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 49481 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedDataDescription_getDataSource(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:49221:9: note: 'argv[1]' was declared here BUILDSTDERR: 49221 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSlices_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:48131:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 48131 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSlices_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:47871:9: note: 'argv[1]' was declared here BUILDSTDERR: 47871 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSimulations_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:46029:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 46029 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfSimulations_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:45717:9: note: 'argv[1]' was declared here BUILDSTDERR: 45717 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfAlgorithmParameters_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:44445:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 44445 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfAlgorithmParameters_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:44185:9: note: 'argv[1]' was declared here BUILDSTDERR: 44185 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithmParameter_setKisaoID(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:43815:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 43815 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_removeAlgorithmParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:42882:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 42882 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_getAlgorithmParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:42622:9: note: 'argv[1]' was declared here BUILDSTDERR: 42622 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedAlgorithm_setKisaoID(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:43133:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 43133 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfModels_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:41993:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 41993 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfModels_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:41733:9: note: 'argv[1]' was declared here BUILDSTDERR: 41733 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedModel_removeChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:41217:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 41217 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedModel_getChange(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:40857:9: note: 'argv[1]' was declared here BUILDSTDERR: 40857 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_removeParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:39820:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 39820 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_getParameter(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:39560:9: note: 'argv[1]' was declared here BUILDSTDERR: 39560 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_removeVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:39375:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 39375 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedComputeChange_getVariable(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:39115:9: note: 'argv[1]' was declared here BUILDSTDERR: 39115 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfChanges_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:36754:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 36754 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfChanges_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:36394:9: note: 'argv[1]' was declared here BUILDSTDERR: 36394 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfParameters_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:35469:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 35469 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfParameters_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:35209:9: note: 'argv[1]' was declared here BUILDSTDERR: 35209 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfVariables_remove(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:34079:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 34079 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedListOfVariables_get(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:2503:41: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 2503 | int res = SWIG_AsVal_unsigned_SS_long (obj, &v); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:33819:9: note: 'argv[1]' was declared here BUILDSTDERR: 33819 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_appendNotes(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:24050:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 24050 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_replaceTopLevelAnnotationElement(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:23745:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 23745 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_appendAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:23497:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 23497 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedBase_setAnnotation(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:23378:56: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 23378 | int res = SWIG_AsPtr_std_basic_string_Sl_char_Sg_(argv[1], (std::basic_string**)(0)); BUILDSTDERR: | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_XMLErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5092:28: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 5092 | if (rb_obj_is_kind_of(obj, rb_cArray) == Qtrue) { BUILDSTDERR: | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:28456:9: note: 'argv[1]' was declared here BUILDSTDERR: 28456 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE _wrap_SedErrorLog_add(int, VALUE*, VALUE)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1379:83: warning: 'argv[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 1379 | #define SWIG_ConvertPtr(obj, pptr, type, flags) SWIG_Ruby_ConvertPtrAndOwn(obj, pptr, type, flags, 0) BUILDSTDERR: | ^ BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:31287:9: note: 'argv[1]' was declared here BUILDSTDERR: 31287 | VALUE argv[3]; BUILDSTDERR: | ^~~~ BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a R keyword, renaming to '_next' BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../swig -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp [ 81%] Linking CXX shared library libSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_ruby_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,libSEDML.so -o libSEDML.so CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lruby /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 82%] Built target binding_ruby_lib make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 83%] Swig R source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r -I/usr/include/ -I/usr/include/ -c++ -r -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/libsedml.i make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 83%] Built target binding_r_swig make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' BUILDSTDERR: make -f bindings/r/CMakeFile/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libsedml_wrap.cpp: In function 'int _p_f_p_q_const__ASTNode__int(const ASTNode_t*)': BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libsedml_wrap.cpp:67889:7: warning: unused variable 'ecode' [-Wunused-variable] BUILDSTDERR: 67889 | int ecode = 0; BUILDSTDERR: | ^~~~~ BUILDSTDERR: DONE BUILDSTDERR: * installing *source* package 'libSEDML' ... BUILDSTDERR: ** using staged installation BUILDSTDERR: ** R BUILDSTDERR: ** inst BUILDSTDERR: ** byte-compile and prepare package for lazy loading s/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 83%] Building CXX object bindings/r/CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_r_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/r/../swig -I/usr/include/R -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libsedml_wrap.cpp [ 84%] Linking CXX shared library libSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_r_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,libSEDML.so -o libSEDML.so CMakeFiles/binding_r_lib.dir/libsedml_wrap.cpp.o -L/usr/lib64/R/lib ../../sedml/libsedml-static.a -lR /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 85%] Built target binding_r_lib make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= Scanning dependencies of target binding_r_package make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 86%] Create R Package (64bit) cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML.R" -P /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/patch-swig-file.cmake cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML.so /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML/inst/libs cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML.R /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML/R cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/R CMD INSTALL --build --no-libs --no-test-load --no-clean-on-error --no-multiarch libSEDML -l temp Note: possible error in 'cerr_get(.copy)': unused argument (.copy) Note: possible error in 'clog_get(.copy)': unused argument (.copy) BUILDSTDERR: Note: possible error in 'cout_get(.copy)': u** help BUILDSTDERR: *** installing help indices BUILDSTDERR: ** building package indices BUILDSTDERR: ** checking absolute paths in shared objects and dynamic libraries BUILDSTDERR: * creating tarball BUILDSTDERR: packaged installation of 'libSEDML' as 'libSEDML_0.4.4_R_riscv64-redhat-linux-gnu.tar.gz' BUILDSTDERR: * DONE (libSEDML) nused argument (.copy) No man pages found in package 'libSEDML' make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 86%] Built target binding_r_package make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 86%] Building C object examples/c/CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.4/examples/c/echo_sedml.c [ 87%] Linking CXX executable echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/example_c_echo_sedml.dir/echo_sedml.c.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 87%] Built target example_c_echo_sedml make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 88%] Building C object examples/c/CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.4/examples/c/print_sedml.c [ 89%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/example_c_print_sedml.dir/print_sedml.c.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 89%] Built target example_c_print_sedml make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_c_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 90%] Building C object examples/c/CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c && /usr/bin/cc -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -DNDEBUG -o CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -c /builddir/build/BUILD/libSEDML-0.4.4/examples/c/create_sedml.c [ 91%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_c_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/example_c_create_sedml.dir/create_sedml.c.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 91%] Built target example_c_create_sedml make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 91%] Building CXX object examples/c++/CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/examples/c++/create_sedml.cpp [ 92%] Linking CXX executable create_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_create_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/example_cpp_create_sedml.dir/create_sedml.cpp.o -o create_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 92%] Built target example_cpp_create_sedml make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 92%] Building CXX object examples/c++/CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/examples/c++/print_sedml.cpp [ 93%] Linking CXX executable print_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/example_cpp_print_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/example_cpp_print_sedml.dir/print_sedml.cpp.o -o print_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 93%] Built target example_cpp_print_sedml make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_cpp_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 94%] Building CXX object examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++ -I/builddir/build/BUILD/libSEDML-0.4.4/examples/c++/../../include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/examples/c++/echo_sedml.cpp [ 95%] Linking CXX executable echo_sedml BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ && /usr/bin/cmake -E cmake_link_script CMakeFiles/examplwarning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings BUILDSTDERR: warning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings e_cpp_echo_sedml.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/example_cpp_echo_sedml.dir/echo_sedml.cpp.o -o echo_sedml ../../sedml/libsedml-static.a -lz /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 95%] Built target example_cpp_echo_sedml make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/CMakeFiles/example_java_print_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_print_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 96%] Build java example print_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/examples/java/print_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 96%] Built target example_java_print_sedml make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/CMakeFiles/example_java_echo_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_echo_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 96%] Build java example echo_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/examples/java/echo_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 96%] Built target example_java_echo_sedml make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lwarning: [options] bootstrap class path not set in conjunction with -source 1.5 BUILDSTDERR: warning: [options] source value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] target value 1.5 is obsolete and will be removed in a future release BUILDSTDERR: warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. BUILDSTDERR: 4 warnings ibSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/CMakeFiles/example_java_create_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target example_java_create_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 97%] Build java example create_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java && /usr/bin/javac -cp .:"/builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/../../bindings/java/libsedmlj.jar":/builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/examples/java/create_sedml.java -source 1.5 -target 1.5 -d /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 97%] Built target example_java_create_sedml make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/tests /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/tests /builddir/build/BUILD/libSEDML-0.4.4/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= Scanning dependencies of target test_sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 98%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestIssues.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.4/build -I/builddir/build/BUILD/libSEDML-0.4.4/tests/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestIssues.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/tests/TestIssues.cpp [ 99%] Building CXX object tests/CMakeFiles/test_sedml.dir/TestRunner.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/tests && /usr/bin/c++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/common -I/builddir/build/BUILD/libSEDML-0.4.4/build -I/builddir/build/BUILD/libSEDML-0.4.4/tests/.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/tests/TestRunner.cpp [100%] Linking CXX executable test_sedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sedml.dir/link.txt --verbose=1 BUILDSTDERR: /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwi+ RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 nd-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -rdynamic CMakeFiles/test_sedml.dir/TestIssues.cpp.o CMakeFiles/test_sedml.dir/TestRunner.cpp.o -o test_sedml ../sedml/libsedml-static.a -lcheck -lsbml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.juYnqZ + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 + cd libSEDML-0.4.4 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/cmake -S/builddir/build/BUILD/libSEDML-0.4.4 -B/builddir/build/BUILD/libSEDML-0.4.4/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/sedml /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/sedml /builddir/build/BUILD/libSEDML-0.4.4/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml-static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 34%] Built target sedml-static /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/sedml /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/sedml /builddir/build/BUILD/libSEDML-0.4.4/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'sedml/CMakeFiles/sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 69%] Built target sedml /usr/bin/make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Built target binding_java_swig /usr/bin/make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_jar.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 71%] Built target binding_java_jar /usr/bin/make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/java/CMakeFiles/binding_java_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 73%] Built target binding_java_lib /usr/bin/make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Built target binding_python_swig /usr/bin/make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/python/CMakeFiles/binding_python_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 76%] Built target binding_python_lib /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' BUILDSTDERR: cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindin/usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLInputStream.h:232: Warning 314: 'next' is a perl keyword BUILDSTDERR: /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/sbml/math/ASTNode.h:197: Warning 401: Nothing known about base class 'ASTBase'. Ignored. BUILDSTDERR: /usr/include/sbml/xml/XMLConstructorException.h:68: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. BUILDSTDERR: /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. gs/perl /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 77%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/libsedml.i make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 77%] Built target binding_perl_swig /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 78%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/libsedml.i [ 78%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/c++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML.cpp [ 79%] Linking CXX shared module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 79%] Built target binding_perl_lib /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 80%] Built target binding_ruby_swig /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 82%] Built target binding_ruby_lib /usr/bin/make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/CMakeFiles/binding_r_swig.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/r/CMakeFiles/binding_r_swig.dir/build.make bindings/r/CMakeFiles/binding_r_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' BUILDSTDERR: make[2]: Nothing to be done for DONE BUILDSTDERR: * installing *source* package 'libSEDML' ... BUILDSTDERR: ** using staged installation BUILDSTDERR: ** R BUILDSTDERR: ** inst BUILDSTDERR: ** byte-compile and prepare package for lazy loading BUILDSTDERR: ** help BUILDSTDERR: *** installing help indices BUILDSTDERR: ** building package indices BUILDSTDERR: ** checking absolute paths in shared objects and dynamic libraries BUILDSTDERR: * creating tarball BUILDSTDERR: packaged installation of 'libSEDML' as 'libSEDML_0.4.4_R_riscv64-redhat-linux-gnu.tar.gz' BUILDSTDERR: * DONE (libSEDML) 'bindings/r/CMakeFiles/binding_r_swig.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 83%] Built target binding_r_swig /usr/bin/make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/CMakeFiles/binding_r_lib.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/r/CMakeFiles/binding_r_lib.dir/build.make bindings/r/CMakeFiles/binding_r_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'bindings/r/CMakeFiles/binding_r_lib.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 85%] Built target binding_r_lib /usr/bin/make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/CMakeFiles/binding_r_package.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f bindings/r/CMakeFiles/binding_r_package.dir/build.make bindings/r/CMakeFiles/binding_r_package.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 86%] Create R Package (64bit) cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -DFILENAME="/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML.R" -P /builddir/build/BUILD/libSEDML-0.4.4/bindings/r/patch-swig-file.cmake cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML.so /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML/inst/libs cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/cmake -E copy_if_different /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML.R /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r/libSEDML/R cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/r && /usr/bin/R CMD INSTALL --build --no-libs --no-test-load --no-clean-on-error --no-multiarch libSEDML -l temp Note: possible error in 'cerr_get(.copy)': unused argument (.copy) Note: possible error in 'clog_get(.copy)': unused argument (.copy) Note: possible error in 'cout_get(.copy)': unused argument (.copy) No man pages found in package 'libSEDML' make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 86%] Built target binding_r_package /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/CMakeFiles/example_c_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/c/CMakeFiles/example_c_echo_sedml.dir/build.make examples/c/CMakeFiles/example_c_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 87%] Built target example_c_echo_sedml /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/CMakeFiles/example_c_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/c/CMakeFiles/example_c_print_sedml.dir/build.make examples/c/CMakeFiles/example_c_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 89%] Built target example_c_print_sedml /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c/CMakeFiles/example_c_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/c/CMakeFiles/example_c_create_sedml.dir/build.make examples/c/CMakeFiles/example_c_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/c/CMakeFiles/example_c_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 91%] Built target example_c_create_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/CMakeFiles/example_cpp_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 92%] Built target example_cpp_create_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/CMakeFiles/example_cpp_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 93%] Built target example_cpp_print_sedml /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++ /builddir/build/BUILD/libSEDML-0.4.4/build/examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build.make examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/c++/CMakeFiles/example_cpp_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 95%] Built target example_cpp_echo_sedml /usr/bin/make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/CMakeFiles/example_java_print_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/java/CMakeFiles/example_java_print_sedml.dir/build.make examples/java/CMakeFiles/example_java_print_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_print_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 96%] Built target example_java_print_sedml /usr/bin/make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/CMakeFiles/example_java_echo_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/java/CMakeFiles/example_java_echo_sedml.dir/build.make examples/java/CMakeFiles/example_java_echo_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_echo_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 96%] Built target example_java_echo_sedml /usr/bin/make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java /builddir/build/BUILD/libSEDML-0.4.4/build/examples/java/CMakeFiles/example_java_create_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f examples/java/CMakeFiles/example_java_create_sedml.dir/build.make examples/java/CMakeFiles/example_java_create_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'examples/java/CMakeFiles/example_java_create_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 97%] Built target example_java_create_sedml /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/tests /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/tests /builddir/build/BUILD/libSEDML-0.4.4/build/tests/CMakeFiles/test_sedml.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/make -f tests/CMakeFiles/test_sedml.dir/build.make tests/CMakeFiles/test_sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[2]: Nothing to be done for 'tests/CMakeFiles/test_sedml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [100%] Built target test_sedml make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/common/common.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/common/extern.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/common/libsedml-config.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/common/operationReturnValues.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/common/sedmlfwd.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedAddXML.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedAlgorithm.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedAlgorithmParameter.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedBase.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedChange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedChangeAttribute.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedChangeXML.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedComputeChange.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedConstructorException.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedCurve.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedDataDescription.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedDataGenerator.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedDataSet.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedDataSource.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedDocument.h -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/include/sedml/SedError.h -- Installing: 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/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml.so.0 -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/cmake/sedml-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/cmake/sedml-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/cmake/sedml-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml-static.a -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/cmake/sedml-static-config.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/cmake/sedml-static-config-release.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/cmake/sedml-static-config-version.cmake -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml/libsedmlj.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/java/libsedmlj.jar -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/python3.7/site-packages/libsedml/_libsedml.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/python3.7/site-packages/libsedml.pth -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/python3.7/site-packages/libsedml/libsedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/perl5/vendor_perl/LibSEDML.pm -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/perl5/vendor_perl/auto/libSEDML/LibSEDML.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/ruby/vendor_ruby/libSEDML.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libSEDML.so -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c/create_sedml.c -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c/echo_sedml.c -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c/print_sedml.c -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c++/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c++/create_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c++/echo_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/c++/print_sedml.cpp -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/java/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/java/create_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/java/echo_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/java/print_sedml.java -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/python/README.md -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/python/create_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/python/create_sedml2.py BUILDSTDERR: -- Installing: /builddir/build/BU+ mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml + mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/R/library build/bindings/r/libSEDML_0.4.4_R_riscv64-redhat-linux-gnu.tar.gz BUILDSTDERR: * installing *binary* package 'libSEDML' ... BUILDSTDERR: * DONE (libSEDML) + test -d SEDML/src + rm -rf /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/R/library/SEDML/R.css + ln -sf /usr/lib64/libSEDML.so /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/R/library/libSEDML/libs/libSEDML.so + find /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 -name '*.la' -delete + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 0.4.4-5.fc31 --unique-debug-suffix -0.4.4-5.fc31.riscv64 --unique-debug-src-base libsedml-0.4.4-5.fc31.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libSEDML-0.4.4 BUILDSTDERR: 46385 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs ILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/python/echo_sedml.py -- Installing: /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/libsedml/examples/python/print_sedml.py make: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml.so.0.4.4 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libSEDML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml/libsedmlj.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/perl5/vendor_perl/auto/libSEDML/LibSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml.so.0.4.4 extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/libsedml/libsedmlj.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/perl5/vendor_perl/auto/libSEDML/LibSEDML.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/python3.7/site-packages/libsedml/_libsedml.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/python3.7/site-packages/libsedml/_libsedml.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/ruby/vendor_ruby/libSEDML.so extracting debug info from /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/ruby/vendor_ruby/libSEDML.so original debug info size: 117548kB, size after compression: 96132kB /usr/lib/rpm/sepdebugcrcfix: Updated 6 CRC32s, 0 CRC32s did match. Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib/debug/usr/lib64/python3.7 using /usr/bin/python3.7 Bytecompiling .py files below /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/lib64/python3.7 using /usr/bin/python3.7 Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.hZQQ1W + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + pushd build + ctest -V --force-new-ctest-process --stop-time 2000 + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 ~/build/BUILD/libSEDML-0.4.4/build ~/build/BUILD/libSEDML-0.4.4 UpdateCTestConfiguration from :/builddir/build/BUILD/libSEDML-0.4.4/build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/libSEDML-0.4.4/build/DartConfiguration.tcl Test project /builddir/build/BUILD/libSEDML-0.4.4/build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_sedml_run 1: Test command: /builddir/build/BUILD/libSEDML-0.4.4/build/tests/test_sedml 1: Test timeout computed to be: 10000000 1: Testing issues reported using: 1: libSBML : 5.17.0 (using new ASTnode implementation) 1: libSEDML : 0.4.4 1: 1: Running suite(s): SedMLIssues 1: 100%: Checks: 1, Failures: 0, Errors: 0 1/1 Test #1: test_sedml_run ................... Passed 1.16 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 1.32 sec Processing files: libsedml-0.4.4-5.fc31.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.ZisYtZ + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.SCB3tV + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Provides: libsedml = 1:0.4.4-5.fc31 libsedml(riscv-64) = 1:0.4.4-5.fc31 libsedml.so.0()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: libsedml-sharp < 1:0.4.4-1 python2-libsedml < 1:0.4.4-2 Processing files: libsedml-devel-0.4.4-5.fc31.riscv64 Provides: libsedml-devel = 1:0.4.4-5.fc31 libsedml-devel(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsedml.so.0()(64bit) Processing files: libsedml-static-0.4.4-5.fc31.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.VnASqY + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.F9BgyX + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Provides: libsedml-static = 1:0.4.4-5.fc31 libsedml-static(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-libsedml-0.4.4-5.fc31.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.KWmqHX + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.rP0jFZ + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Provides: python-libsedml = 1:0.4.4-5.fc31 python3-libsedml = 1:0.4.4-5.fc31 python3-libsedml(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnuml.so.1()(64bit) libpython3.7m.so.1.0()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.7 rtld(GNU_HASH) Obsoletes: python-libsedml < 1:0.4.4-5.fc31 Processing files: java-SEDML-0.4.4-5.fc31.riscv64 Provides: java-SEDML = 1:0.4.4-5.fc31 java-SEDML(riscv-64) = 1:0.4.4-5.fc31 libsedmlj.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: perl-SEDML-0.4.4-5.fc31.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.NuXwxW + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.y34oBV + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Provides: perl(LibSEDML) perl(LibSEDML::ASTNode) perl(LibSEDML::ASTNodeList) perl(LibSEDML::AtomicDescription) perl(LibSEDML::AtomicValue) perl(LibSEDML::CVTerm) perl(LibSEDML::CVTermList) perl(LibSEDML::CompositeDescription) perl(LibSEDML::CompositeValue) perl(LibSEDML::Date) perl(LibSEDML::DateList) perl(LibSEDML::Dimension) perl(LibSEDML::DimensionDescription) perl(LibSEDML::DoubleStdVector) perl(LibSEDML::L3ParserSettings) perl(LibSEDML::MathML) perl(LibSEDML::Model) perl(LibSEDML::ModelCreatorList) perl(LibSEDML::NMBase) perl(LibSEDML::NUMLConstructorException) perl(LibSEDML::NUMLDocument) perl(LibSEDML::NUMLError) perl(LibSEDML::NUMLErrorLog) perl(LibSEDML::NUMLList) perl(LibSEDML::NUMLNamespaces) perl(LibSEDML::NUMLReader) perl(LibSEDML::NUMLWriter) perl(LibSEDML::OFStream) perl(LibSEDML::ONTOLOGY) perl(LibSEDML::OStream) perl(LibSEDML::OStringStream) perl(LibSEDML::OntologyTerm) perl(LibSEDML::OntologyTerms) perl(LibSEDML::ResultComponent) perl(LibSEDML::ResultComponents) perl(LibSEDML::SBMLNamespaces) perl(LibSEDML::SBase) perl(LibSEDML::SBaseList) perl(LibSEDML::SedAddXML) perl(LibSEDML::SedAlgorithm) perl(LibSEDML::SedAlgorithmParameter) perl(LibSEDML::SedBase) perl(LibSEDML::SedBaseList) perl(LibSEDML::SedChange) perl(LibSEDML::SedChangeAttribute) perl(LibSEDML::SedChangeXML) perl(LibSEDML::SedComputeChange) perl(LibSEDML::SedConstructorException) perl(LibSEDML::SedCurve) perl(LibSEDML::SedDataDescription) perl(LibSEDML::SedDataGenerator) perl(LibSEDML::SedDataSet) perl(LibSEDML::SedDataSource) perl(LibSEDML::SedDocument) perl(LibSEDML::SedError) perl(LibSEDML::SedErrorLog) perl(LibSEDML::SedErrorStdVector) perl(LibSEDML::SedFunctionalRange) perl(LibSEDML::SedListOf) perl(LibSEDML::SedListOfAlgorithmParameters) perl(LibSEDML::SedListOfChanges) perl(LibSEDML::SedListOfCurves) perl(LibSEDML::SedListOfDataDescriptions) perl(LibSEDML::SedListOfDataGenerators) perl(LibSEDML::SedListOfDataSets) perl(LibSEDML::SedListOfDataSources) perl(LibSEDML::SedListOfFunctionalRanges) perl(LibSEDML::SedListOfModels) perl(LibSEDML::SedListOfOutputs) perl(LibSEDML::SedListOfParameters) perl(LibSEDML::SedListOfRanges) perl(LibSEDML::SedListOfSimulations) perl(LibSEDML::SedListOfSlices) perl(LibSEDML::SedListOfSubTasks) perl(LibSEDML::SedListOfSurfaces) perl(LibSEDML::SedListOfTaskChanges) perl(LibSEDML::SedListOfTasks) perl(LibSEDML::SedListOfVariables) perl(LibSEDML::SedModel) perl(LibSEDML::SedNamespaces) perl(LibSEDML::SedNamespacesList) perl(LibSEDML::SedOneStep) perl(LibSEDML::SedOutput) perl(LibSEDML::SedParameter) perl(LibSEDML::SedPlot2D) perl(LibSEDML::SedPlot3D) perl(LibSEDML::SedRange) perl(LibSEDML::SedReader) perl(LibSEDML::SedRemoveXML) perl(LibSEDML::SedRepeatedTask) perl(LibSEDML::SedReport) perl(LibSEDML::SedSetValue) perl(LibSEDML::SedSimulation) perl(LibSEDML::SedSlice) perl(LibSEDML::SedSteadyState) perl(LibSEDML::SedSubTask) perl(LibSEDML::SedSurface) perl(LibSEDML::SedTask) perl(LibSEDML::SedUniformRange) perl(LibSEDML::SedUniformTimeCourse) perl(LibSEDML::SedVariable) perl(LibSEDML::SedVectorRange) perl(LibSEDML::SedWriter) perl(LibSEDML::Tuple) perl(LibSEDML::TupleDescription) perl(LibSEDML::XMLAttributes) perl(LibSEDML::XMLConstructorException) perl(LibSEDML::XMLError) perl(LibSEDML::XMLErrorLog) perl(LibSEDML::XMLInputStream) perl(LibSEDML::XMLNamespaces) perl(LibSEDML::XMLNode) perl(LibSEDML::XMLOutputStream) perl(LibSEDML::XMLOwningOutputFileStream) perl(LibSEDML::XMLOwningOutputStringStream) perl(LibSEDML::XMLToken) perl(LibSEDML::XMLTriple) perl(LibSEDML::XmlErrorStdVector) perl(LibSEDMLc) perl-SEDML = 1:0.4.4-5.fc31 perl-SEDML(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libnuml.so.1()(64bit) libperl.so.5.30()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) perl(DynaLoader) perl(Exporter) perl(base) perl(vars) rtld(GNU_HASH) Processing files: ruby-SEDML-0.4.4-5.fc31.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Rn0tHV + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.tobLZW + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Provides: libSEDML.so()(64bit) ruby(SBML) = 0.4.4 ruby-SEDML = 1:0.4.4-5.fc31 ruby-SEDML(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnuml.so.1()(64bit) libruby.so.2.5()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: R-SEDML-0.4.4-5.fc31.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.WJNdeY + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + DOCDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + cp -pr NEWS.md README.md /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/doc/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LYJEnX + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + LICENSEDIR=/builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + cp -pr LICENSE.txt /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64/usr/share/licenses/libsedml + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 BUILDSTDERR: warning: absolute symlink: /usr/lib64/R/library/libSEDML/libs/libSEDML.so -> /usr/lib64/libSEDML.so Provides: R(libSEDML) = 0.4.4 R-SEDML = 1:0.4.4-5.fc31 R-SEDML(riscv-64) = 1:0.4.4-5.fc31 libSEDML.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R-core >= 1.8.0 ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libnuml.so.1()(64bit) libsbml.so.5()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libsedml-debugsource-0.4.4-5.fc31.riscv64 Provides: libsedml-debugsource = 1:0.4.4-5.fc31 libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libsedml-debuginfo-0.4.4-5.fc31.riscv64 Provides: debuginfo(build-id) = 1a15523659367677861517e6214e8c3206c0e16a libsedml-debuginfo = 1:0.4.4-5.fc31 libsedml-debuginfo(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Processing files: python3-libsedml-debuginfo-0.4.4-5.fc31.riscv64 Provides: debuginfo(build-id) = c2228eade125529125d0398864ab50a3559e226a python3-libsedml-debuginfo = 1:0.4.4-5.fc31 python3-libsedml-debuginfo(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Processing files: java-SEDML-debuginfo-0.4.4-5.fc31.riscv64 Provides: debuginfo(build-id) = a1ecc3db5c2c38678a985d20b3b8e8cd61385978 java-SEDML-debuginfo = 1:0.4.4-5.fc31 java-SEDML-debuginfo(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Processing files: perl-SEDML-debuginfo-0.4.4-5.fc31.riscv64 Provides: debuginfo(build-id) = f6a4921edfff64aa9a6c90b95986290e53420606 perl-SEDML-debuginfo = 1:0.4.4-5.fc31 perl-SEDML-debuginfo(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Processing files: ruby-SEDML-debuginfo-0.4.4-5.fc31.riscv64 Provides: debuginfo(build-id) = 8e4251d1fc624e2e36b1f38a732b94b940be06fc ruby-SEDML-debuginfo = 1:0.4.4-5.fc31 ruby-SEDML-debuginfo(riscv-64) = 1:0.4.4-5.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Processing files: R-SEDML-debuginfo-0.4.4-5.fc31.riscv64 Provides: R-SEDML-debuginfo = 1:0.4.4-5.fc31 R-SEDML-debuginfo(riscv-64) = 1:0.4.4-5.fc31 debuginfo(build-id) = e73bbc936f780440fb59e36138befd384805178b Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libsedml-debugsource(riscv-64) = 1:0.4.4-5.fc31 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 Wrote: /builddir/build/RPMS/libsedml-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-devel-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/java-SEDML-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/ruby-SEDML-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/perl-SEDML-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-SEDML-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-debuginfo-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-static-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/python3-libsedml-debuginfo-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/java-SEDML-debuginfo-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/perl-SEDML-debuginfo-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/libsedml-debugsource-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/ruby-SEDML-debuginfo-0.4.4-5.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-SEDML-debuginfo-0.4.4-5.fc31.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.j1JILV + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/libsedml-0.4.4-5.fc31.riscv64 + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Child return code was: 0