Mock Version: 1.4.21
Mock Version: 1.4.21
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'], chrootPath='/var/lib/mock/f33-build-126187-39974/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fb2fcc700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1580428800
Wrote: /builddir/build/SRPMS/staden-io_lib-1.12.4-18.fc33.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'], chrootPath='/var/lib/mock/f33-build-126187-39974/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fb2fcc700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1580428800
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.MZZfcS
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf io_lib-1.12.4
+ /usr/bin/gzip -dc /builddir/build/SOURCES/io_lib-1.12.4.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd io_lib-1.12.4
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ mv io_lib-config.in staden-io_lib-config.in
+ sed -i s/libread/libstaden-read/g io_lib/Makefile.in progs/Makefile.in
+ sed -i s/lread/lstaden-read/ staden-io_lib-config.in
+ sed -i s/io_lib-config/staden-io_lib-config/g configure Makefile.in
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.egMQAR
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh
+ ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-static
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for riscv64-redhat-linux-gnu-gcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking build system type... riscv64-redhat-linux-gnu
checking host system type... riscv64-redhat-linux-gnu
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking whether ln -s works... yes
checking how to recognise dependent libraries... pass_all
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for riscv64-redhat-linux-gnu-g++... no
checking for riscv64-redhat-linux-gnu-c++... no
checking for riscv64-redhat-linux-gnu-gpp... no
checking for riscv64-redhat-linux-gnu-aCC... no
checking for riscv64-redhat-linux-gnu-CC... no
checking for riscv64-redhat-linux-gnu-cxx... no
checking for riscv64-redhat-linux-gnu-cc++... no
checking for riscv64-redhat-linux-gnu-cl.exe... no
checking for riscv64-redhat-linux-gnu-FCC... no
checking for riscv64-redhat-linux-gnu-KCC... no
checking for riscv64-redhat-linux-gnu-RCC... no
checking for riscv64-redhat-linux-gnu-xlC_r... no
checking for riscv64-redhat-linux-gnu-xlC... no
checking for g++... no
checking for c++... no
checking for gpp... no
checking for aCC... no
checking for CC... no
checking for cxx... no
checking for cc++... no
checking for cl.exe... no
checking for FCC... no
checking for KCC... no
checking for RCC... no
checking for xlC_r... no
checking for xlC... no
checking whether we are using the GNU C++ compiler... no
checking whether g++ accepts -g... no
checking dependency style of g++... none
checking for riscv64-redhat-linux-gnu-g77... no
checking for riscv64-redhat-linux-gnu-xlf... no
checking for riscv64-redhat-linux-gnu-f77... no
checking for riscv64-redhat-linux-gnu-frt... no
checking for riscv64-redhat-linux-gnu-pgf77... no
checking for riscv64-redhat-linux-gnu-cf77... no
checking for riscv64-redhat-linux-gnu-fort77... no
checking for riscv64-redhat-linux-gnu-fl32... no
checking for riscv64-redhat-linux-gnu-af77... no
checking for riscv64-redhat-linux-gnu-xlf90... no
checking for riscv64-redhat-linux-gnu-f90... no
checking for riscv64-redhat-linux-gnu-pgf90... no
checking for riscv64-redhat-linux-gnu-pghpf... no
checking for riscv64-redhat-linux-gnu-epcf90... no
checking for riscv64-redhat-linux-gnu-gfortran... no
checking for riscv64-redhat-linux-gnu-g95... no
checking for riscv64-redhat-linux-gnu-xlf95... no
checking for riscv64-redhat-linux-gnu-f95... no
checking for riscv64-redhat-linux-gnu-fort... no
checking for riscv64-redhat-linux-gnu-ifort... no
checking for riscv64-redhat-linux-gnu-ifc... no
checking for riscv64-redhat-linux-gnu-efc... no
checking for riscv64-redhat-linux-gnu-pgf95... no
checking for riscv64-redhat-linux-gnu-lf95... no
checking for riscv64-redhat-linux-gnu-ftn... no
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... no
checking for g95... no
checking for xlf95... no
checking for f95... no
checking for fort... no
checking for ifort... no
checking for ifc... no
checking for efc... no
checking for pgf95... no
checking for lf95... no
checking for ftn... no
checking whether we are using the GNU Fortran 77 compiler... no
checking whether  accepts -g... no
checking the maximum length of command line arguments... 32768
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for objdir... .libs
checking for riscv64-redhat-linux-gnu-ar... no
checking for ar... ar
checking for riscv64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking for riscv64-redhat-linux-gnu-strip... no
checking for strip... strip
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC
checking if gcc PIC flag -fPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory
GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
configure: creating libtool
appending configuration tag "CXX" to libtool
appending configuration tag "F77" to libtool
host=riscv64-redhat-linux-gnu
Fixing libtool for -rpath problems.
checking for gawk... (cached) gawk
checking for curl-config... /usr/bin/curl-config
checking for the version of libcurl... 7.67.0
checking whether libcurl just needs -lcurl... yes
checking whether libcurl is usable... yes
checking for curl_free... yes
checking for inflateEnd in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking whether byte ordering is bigendian... no
checking for ANSI C header files... (cached) yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for unistd.h... (cached) yes
checking for zlib.h... (cached) yes
checking whether byte ordering is bigendian... (cached) no
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking for inline... inline
checking for mode_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking for library containing cos... -lm
checking for strdup... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating io_lib/Makefile
config.status: creating progs/Makefile
config.status: creating tests/Makefile
config.status: creating staden-io_lib-config
config.status: creating io_lib/os.h
config.status: creating io_lib_config.h
config.status: executing depfiles commands
+ sed -i 's+\(search_path_spec="\)+\1/lib64 /usr/lib64 +' libtool
+ make -j4
make  all-recursive
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
Making all in io_lib
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c
mkdir .libs
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c Read.c  -fPIC -DPIC -o .libs/libstaden_read_la-Read.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c compression.c  -fPIC -DPIC -o .libs/libstaden_read_la-compression.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c translate.c  -fPIC -DPIC -o .libs/libstaden_read_la-translate.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_extras.c  -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o
translate.c: In function 'read2exp':
translate.c:292:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  292 |  if (p = strrchr(EN, '/'))
      |      ^
translate.c:302:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  302 |      if (cp = strrchr(read->trace_name, '/'))
      |          ^~
translate.c: In function 'exp2read':
translate.c:650:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  650 |  if (fp = open_trace_file(exp_get_entry(e, EFLT_LN), fn)) {
      |      ^~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr.c  -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr_translate.c  -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o
ztr_translate.c:335:14: warning: 'ztr_encode_confidence_1' defined but not used [-Wunused-function]
  335 | static char *ztr_encode_confidence_1(ztr_t *z,
      |              ^~~~~~~~~~~~~~~~~~~~~~~
ztr_translate.c:182:14: warning: 'ztr_encode_samples_T' defined but not used [-Wunused-function]
  182 | static char *ztr_encode_samples_T(ztr_t *z,
      |              ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c:175:14: warning: 'ztr_encode_samples_G' defined but not used [-Wunused-function]
  175 | static char *ztr_encode_samples_G(ztr_t *z,
      |              ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c:168:14: warning: 'ztr_encode_samples_C' defined but not used [-Wunused-function]
  168 | static char *ztr_encode_samples_C(ztr_t *z,
      |              ^~~~~~~~~~~~~~~~~~~~
ztr_translate.c:161:14: warning: 'ztr_encode_samples_A' defined but not used [-Wunused-function]
  161 | static char *ztr_encode_samples_A(ztr_t *z,
      |              ^~~~~~~~~~~~~~~~~~~~
ztr.c: In function 'mfread_ztr':
ztr.c:335:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  335 |     while (chunk = ztr_read_chunk_hdr(fp)) {
      |            ^~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c deflate_interlaced.c  -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o
deflate_interlaced.c: In function 'calc_bit_lengths':
deflate_interlaced.c:516:9: warning: variable 'map' set but not used [-Wunused-but-set-variable]
  516 |     int map[258];
      |         ^~~
deflate_interlaced.c: In function 'huffman_multi_decode':
deflate_interlaced.c:1760:9: warning: variable 'nc' set but not used [-Wunused-but-set-variable]
 1760 |     int nc;
      |         ^~
deflate_interlaced.c:1759:23: warning: variable 'c' set but not used [-Wunused-but-set-variable]
 1759 |     huffman_codes_t **c;
      |                       ^
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c fpoint.c  -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ctfCompress.lo `test -f 'ctfCompress.c' || echo './'`ctfCompress.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOALF.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOALF.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOABI.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o
seqIOABI.c: In function 'getABIString':
seqIOABI.c:259:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  259 |     if (off = getABIIndexEntryLW(fp, indexO, label, count, 4, &len)) {
      |         ^~~
seqIOABI.c: In function 'mfread_abi':
seqIOABI.c:657:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  657 |   if (p = strchr(commstrp, '\n'))
      |       ^
seqIOABI.c:662:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  662 |      } while(commstrp = p);
      |              ^~~~~~~~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOCTF.lo `test -f 'seqIOCTF.c' || echo './'`seqIOCTF.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo './'`expFileIO.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ctfCompress.c  -fPIC -DPIC -o .libs/libstaden_read_la-ctfCompress.o
ctfCompress.c: In function 'ctfCompress2':
ctfCompress.c:270:80: warning: format '%d' expects argument of type 'int', but argument 7 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
  270 |   printf ("compress2 : %d zeros in %d bytes, %d < 7 , %d byte, %d short total %d char for %d shrt\n",
      |                                                                               ~^
      |                                                                                |
      |                                                                                int
      |                                                                               %ld
ctfCompress.c:270:92: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
  270 |   printf ("compress2 : %d zeros in %d bytes, %d < 7 , %d byte, %d short total %d char for %d shrt\n",
      |                                                                                           ~^
      |                                                                                            |
      |                                                                                            int
      |                                                                                           %ld
ctfCompress.c: In function 'ctfCompress3':
ctfCompress.c:607:116: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
  607 |     printf (" // compress3:\n//  %d zeros in %d bytes, %d values coded in %d byte, %d bytes, %d short. \n// Total %d char for %d shrt\n",
      |                                                                                                                   ~^
      |                                                                                                                    |
      |                                                                                                                    int
      |                                                                                                                   %ld
ctfCompress.c:607:128: warning: format '%d' expects argument of type 'int', but argument 9 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
  607 |     printf (" // compress3:\n//  %d zeros in %d bytes, %d values coded in %d byte, %d bytes, %d short. \n// Total %d char for %d shrt\n",
      |                                                                                                                               ~^
      |                                                                                                                                |
      |                                                                                                                                int
      |                                                                                                                               %ld
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOCTF.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOCTF.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c expFileIO.c  -fPIC -DPIC -o .libs/libstaden_read_la-expFileIO.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo './'`seqIOPlain.c
expFileIO.c: In function 'exp_print_mline':
expFileIO.c:198:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  198 |     if (c = strchr(p, '\n'))
      |         ^
expFileIO.c:207:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  207 |  if (c = strchr(p, '\n')) {
      |      ^
expFileIO.c: In function 'opos2str':
expFileIO.c:393:5: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
  393 |  if (dir == 0)
      |     ^
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo './'`misc_scf.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOPlain.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOPlain.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c misc_scf.c  -fPIC -DPIC -o .libs/libstaden_read_la-misc_scf.o
seqIOPlain.c: In function 'mfread_pln':
seqIOPlain.c:150:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  150 |       if (p = strchr(type, ' '))
      |           ^
In file included from misc_scf.c:33:
misc_scf.c: In function 'is_scf':
../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
   45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
      |                                                  ^~
misc_scf.c:151:19: note: in expansion of macro 'SCF_MAGIC'
  151 |      ok = (magic==SCF_MAGIC);
      |                   ^~~~~~~~~
../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
   45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
      |                                                                  ^~
misc_scf.c:151:19: note: in expansion of macro 'SCF_MAGIC'
  151 |      ok = (magic==SCF_MAGIC);
      |                   ^~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-read_scf.lo `test -f 'read_scf.c' || echo './'`read_scf.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-write_scf.lo `test -f 'write_scf.c' || echo './'`write_scf.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-sff.lo `test -f 'sff.c' || echo './'`sff.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c write_scf.c  -fPIC -DPIC -o .libs/libstaden_read_la-write_scf.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c read_scf.c  -fPIC -DPIC -o .libs/libstaden_read_la-read_scf.o
In file included from ../io_lib/Read.h:44,
                 from read_scf.c:46:
read_scf.c: In function 'read_scf_header':
../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
   45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
      |                                                  ^~
read_scf.c:67:28: note: in expansion of macro 'SCF_MAGIC'
   67 |     if (h->magic_number != SCF_MAGIC)                     return -1;
      |                            ^~~~~~~~~
../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
   45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
      |                                                                  ^~
read_scf.c:67:28: note: in expansion of macro 'SCF_MAGIC'
   67 |     if (h->magic_number != SCF_MAGIC)                     return -1;
      |                            ^~~~~~~~~
In file included from write_scf.c:60:
write_scf.c: In function 'mfwrite_scf':
../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
   45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
      |                                                  ^~
write_scf.c:389:32: note: in expansion of macro 'SCF_MAGIC'
  389 |     scf->header.magic_number = SCF_MAGIC;
      |                                ^~~~~~~~~
../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
   45 | #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
      |                                                                  ^~
write_scf.c:389:32: note: in expansion of macro 'SCF_MAGIC'
  389 |     scf->header.magic_number = SCF_MAGIC;
      |                                ^~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-srf.lo `test -f 'srf.c' || echo './'`srf.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c sff.c  -fPIC -DPIC -o .libs/libstaden_read_la-sff.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-array.lo `test -f 'array.c' || echo './'`array.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-compress.lo `test -f 'compress.c' || echo './'`compress.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-error.lo `test -f 'error.c' || echo './'`error.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf.c  -fPIC -DPIC -o .libs/libstaden_read_la-srf.o
srf.c: In function 'get_hi_bits':
srf.c:1106:59: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
 1106 |     val = (block->data[block->byte]) & (1<<(8-block->bit))-1;
      |                                        ~~~~~~~~~~~~~~~~~~~^~
srf.c:1126:21: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
 1126 |  & (1<<(nbits-bnum))-1;
      |    ~~~~~~~~~~~~~~~~~^~
srf.c: In function 'pack_trace_suffix':
srf.c:1383:10: warning: variable 'width' set but not used [-Wunused-but-set-variable]
 1383 |      int width = 0;
      |          ^~~~~
srf.c: In function 'partial_decode_ztr':
srf.c:1604:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
 1604 |     while (chunk = ztr_read_chunk_hdr(mf)) {
      |            ^~~~~
srf.c: In function 'srf_find_trace':
srf.c:2025:6: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 2025 |      fread(dpos, 1, item_sz, srf->fp);
      |      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c array.c  -fPIC -DPIC -o .libs/libstaden_read_la-array.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c compress.c  -fPIC -DPIC -o .libs/libstaden_read_la-compress.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c error.c  -fPIC -DPIC -o .libs/libstaden_read_la-error.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-files.lo `test -f 'files.c' || echo './'`files.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-find.lo `test -f 'find.c' || echo './'`find.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-mach-io.lo `test -f 'mach-io.c' || echo './'`mach-io.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c files.c  -fPIC -DPIC -o .libs/libstaden_read_la-files.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c find.c  -fPIC -DPIC -o .libs/libstaden_read_la-find.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-open_trace_file.lo `test -f 'open_trace_file.c' || echo './'`open_trace_file.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-read_alloc.lo `test -f 'read_alloc.c' || echo './'`read_alloc.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c mach-io.c  -fPIC -DPIC -o .libs/libstaden_read_la-mach-io.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-strings.lo `test -f 'strings.c' || echo './'`strings.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-traceType.lo `test -f 'traceType.c' || echo './'`traceType.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c open_trace_file.c  -fPIC -DPIC -o .libs/libstaden_read_la-open_trace_file.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c read_alloc.c  -fPIC -DPIC -o .libs/libstaden_read_la-read_alloc.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c strings.c  -fPIC -DPIC -o .libs/libstaden_read_la-strings.o
open_trace_file.c: In function 'find_file_tar':
open_trace_file.c:143:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  143 |   if (cp = strchr(path, '\n'))
      |       ^~
open_trace_file.c: In function 'sff_hash_query':
open_trace_file.c:537:14: warning: assignment to 'FILE **' from incompatible pointer type 'FILE *' [-Wincompatible-pointer-types]
  537 |      hf->afp = hf->hfp = NULL; /* will be closed by our parent */
      |              ^
open_trace_file.c:530:18: warning: variable 'fp_copy' set but not used [-Wunused-but-set-variable]
  530 |     static FILE *fp_copy = NULL;
      |                  ^~~~~~~
open_trace_file.c: In function 'find_file_sff':
open_trace_file.c:748:14: warning: variable 'nkey' set but not used [-Wunused-but-set-variable]
  748 |     uint32_t nkey, nflows, chdrlen, rhdrlen, dlen, magic;
      |              ^~~~
open_trace_file.c: In function 'find_file_dir':
open_trace_file.c:914:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  914 |     if (cp = strrchr(file, '/')) {
      |         ^~
open_trace_file.c: In function 'open_path_mfile':
open_trace_file.c:1087:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
 1087 |  if (cp = strrchr(relative_path, '/'))
      |      ^~
open_trace_file.c:1089:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
 1089 |  if (fp = find_file_dir(file, relative_path))
      |      ^~
In file included from /usr/include/string.h:495,
                 from strings.c:22:
In function 'strncpy',
    inlined from 'c2fstr' at strings.c:49:5:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from strings.c:19:
strings.c: In function 'c2fstr':
strings.c:48:18: note: length computed here
   48 |     i = min((int)strlen(c),max_f);
      |                  ^~~~~~~~~
../io_lib/misc.h:64:23: note: in definition of macro 'min'
   64 | #define min(A,B) ( ( (A) < (B) ) ? (A) : (B) )
      |                       ^
open_trace_file.c: In function 'find_file_sff':
open_trace_file.c:798:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  798 |  fread(index_format, 1, 8, fp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c: In function 'find_file_dir':
open_trace_file.c:929:6: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  929 |      fread(magic, 1, 4, fp);
      |      ^~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c:940:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  940 |   fread(magic, 1, 8, fp);
      |   ^~~~~~~~~~~~~~~~~~~~~~
open_trace_file.c:950:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  950 |   fread(magic, 1, 5, fp);
      |   ^~~~~~~~~~~~~~~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-xalloc.lo `test -f 'xalloc.c' || echo './'`xalloc.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c traceType.c  -fPIC -DPIC -o .libs/libstaden_read_la-traceType.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-vlen.lo `test -f 'vlen.c' || echo './'`vlen.c
open_trace_file.c: In function 'sff_sorted_query':
open_trace_file.c:704:5: warning: 'offset' may be used uninitialized in this function [-Wmaybe-uninitialized]
  704 |     fseek(fp, offset, SEEK_SET);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-hash_table.lo `test -f 'hash_table.c' || echo './'`hash_table.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c vlen.c  -fPIC -DPIC -o .libs/libstaden_read_la-vlen.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c xalloc.c  -fPIC -DPIC -o .libs/libstaden_read_la-xalloc.o
vlen.c: In function 'vflen':
vlen.c:86:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   86 |      for(; c=*++cp;) {
      |            ^
vlen.c:57:9: warning: variable 'i' set but not used [-Wunused-but-set-variable]
   57 |     int i;
      |         ^
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-jenkins_lookup3.lo `test -f 'jenkins_lookup3.c' || echo './'`jenkins_lookup3.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_table.c  -fPIC -DPIC -o .libs/libstaden_read_la-hash_table.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-mFILE.lo `test -f 'mFILE.c' || echo './'`mFILE.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-pooled_alloc.lo `test -f 'pooled_alloc.c' || echo './'`pooled_alloc.c
hash_table.c: In function 'HashFileFopen':
hash_table.c:1140:6: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1140 |      fread(hf->archives[i], 1, fnamelen, fp);
      |      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1156:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1156 |  fread(&hf->headers[i].pos,  8, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1157:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1157 |  fread(&hf->headers[i].size, 4, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1169:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1169 |  fread(&hf->footers[i].pos,  8, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1170:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1170 |  fread(&hf->footers[i].size, 4, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c: In function 'HashFileQuery':
hash_table.c:1368:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1368 |  fread(k, klen, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1369:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1369 |  fread(&headfoot, 1, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1372:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1372 |  fread(&pos, 8, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1376:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1376 |  fread(&size, 4, 1, hf->hfp);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c: In function 'HashFileExtract':
hash_table.c:1506:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1506 |  fread(&data[pos], head->size, 1, hf->afp[head->archive_no]);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1516:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1516 |     fread(&data[pos], hfi.size, 1, hf->afp[hfi.archive]);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_table.c:1526:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1526 |  fread(&data[pos], foot->size, 1, hf->afp[foot->archive_no]);
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c jenkins_lookup3.c  -fPIC -DPIC -o .libs/libstaden_read_la-jenkins_lookup3.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c mFILE.c  -fPIC -DPIC -o .libs/libstaden_read_la-mFILE.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c pooled_alloc.c  -fPIC -DPIC -o .libs/libstaden_read_la-pooled_alloc.o
pooled_alloc.c: In function 'new_pool':
jenkins_lookup3.c:654:17: warning: 'hashbig' defined but not used [-Wunused-function]
  654 | static uint32_t hashbig( const void *key, size_t length, uint32_t initval)
      |                 ^~~~~~~
jenkins_lookup3.c:288:17: warning: 'hashlittle' defined but not used [-Wunused-function]
  288 | static uint32_t hashlittle( const void *key, size_t length, uint32_t initval)
      |                 ^~~~~~~~~~
jenkins_lookup3.c:223:13: warning: 'hashword2' defined but not used [-Wunused-function]
  223 | static void hashword2 (
      |             ^~~~~~~~~
jenkins_lookup3.c:179:17: warning: 'hashword' defined but not used [-Wunused-function]
  179 | static uint32_t hashword(
      |                 ^~~~~~~~
pooled_alloc.c:37:11: warning: unused variable 'cp' [-Wunused-variable]
   37 |     char *cp;
      |           ^~
pooled_alloc.c:35:12: warning: unused variable 'i' [-Wunused-variable]
   35 |     size_t i, n = PSIZE / p->dsize;
      |            ^
pooled_alloc.c: In function 'pool_alloc':
pooled_alloc.c:65:12: warning: unused variable 'i' [-Wunused-variable]
   65 |     size_t i;
      |            ^
pooled_alloc.c: In function 'pool_free':
pooled_alloc.c:95:19: warning: unused variable 'i' [-Wunused-variable]
   95 |     size_t psize, i;
      |                   ^
pooled_alloc.c:95:12: warning: unused variable 'psize' [-Wunused-variable]
   95 |     size_t psize, i;
      |            ^~~~~
mFILE.c: In function 'mfreopen':
mFILE.c:194:16: warning: variable 'w' set but not used [-Wunused-but-set-variable]
  194 |     int r = 0, w = 0, a = 0, b = 0, x = 0, mode = 0;
      |                ^
mFILE.c: In function 'mfflush':
mFILE.c:487:10: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses]
  487 |      if (!mf->mode & MF_MODEX)
      |          ^~~~~~~~~
mFILE.c:493:2: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]
  493 |  ftruncate(fileno(mf->fp), ftell(mf->fp));
      |  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libstaden-read.la -rpath /usr/lib64 -version-info 2:2:1  libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-ctfCompress.lo libstaden_read_la-seqIOCTF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo libstaden_read_la-read_scf.lo libstaden_read_la-write_scf.lo libstaden_read_la-sff.lo libstaden_read_la-srf.lo libstaden_read_la-array.lo libstaden_read_la-compress.lo libstaden_read_la-error.lo libstaden_read_la-files.lo libstaden_read_la-find.lo libstaden_read_la-mach-io.lo libstaden_read_la-open_trace_file.lo libstaden_read_la-read_alloc.lo libstaden_read_la-strings.lo libstaden_read_la-traceType.lo libstaden_read_la-xalloc.lo libstaden_read_la-vlen.lo libstaden_read_la-hash_table.lo libstaden_read_la-jenkins_lookup3.lo libstaden_read_la-mFILE.lo libstaden_read_la-pooled_alloc.lo -lz  -lcurl -lm 
gcc -shared  .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-ctfCompress.o .libs/libstaden_read_la-seqIOCTF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o  -lz -lcurl -lm -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -Wl,-soname -Wl,libstaden-read.so.1 -o .libs/libstaden-read.so.1.1.2
(cd .libs && rm -f libstaden-read.so.1 && ln -s libstaden-read.so.1.1.2 libstaden-read.so.1)
(cd .libs && rm -f libstaden-read.so && ln -s libstaden-read.so.1.1.2 libstaden-read.so)
creating libstaden-read.la
(cd .libs && rm -f libstaden-read.la && ln -s ../libstaden-read.la libstaden-read.la)
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
Making all in progs
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c convert_trace.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c makeSCF.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_seq.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_qual.c
extract_qual.c: In function 'main':
extract_seq.c: In function 'main':
extract_seq.c:199:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  199 |       if (cp = strchr(line, '\n'))
      |           ^~
extract_qual.c:317:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  317 |       if (cp = strchr(line, '\n'))
      |           ^~
convert_trace.c:16:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=]
   16 | static char const rcsid[] = "$Id: convert_trace.c,v 1.12 2008-02-20 16:07:44 jkbonfield Exp $";
      |                   ^~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_fastq.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c index_tar.c
extract_fastq.c: In function 'main':
extract_fastq.c:141:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  141 |       if (cp = strchr(line, '\n'))
      |           ^~
index_tar.c: In function 'main':
index_tar.c:72:21: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
   72 |                     fread(member, 1, size > 256 ? 256 : size, fp);
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
index_tar.c:82:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
   82 |                 fread(member, 1, size > 256 ? 256 : size, fp);
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_dump.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_info.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_update.c
convert_trace.c: In function 'main':
convert_trace.c:743:23: warning: '%s' directive writing up to 8191 bytes into a region of size 2042 [-Wformat-overflow=]
  724 |      infname = line2;
      |                ~~~~~   
......
  743 |   sprintf(buf, "ERROR %s", infname);
      |                       ^~
In file included from /usr/include/stdio.h:871,
                 from convert_trace.c:5:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 7 and 8198 bytes into a destination of size 2048
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c get_comment.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_tar.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_extract.c
hash_tar.c: In function 'load_map':
hash_tar.c:78:5: warning: implicit declaration of function 'close'; did you mean 'pclose'? [-Wimplicit-function-declaration]
   78 |     close(fp);
      |     ^~~~~
      |     pclose
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_list.c
hash_tar.c: In function 'main':
hash_tar.c:273:11: warning: unused variable 'fp' [-Wunused-variable]
  273 |     FILE *fp;
      |           ^~
hash_tar.c: In function 'accumulate':
hash_tar.c:136:21: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  136 |                     fread(member, 1, size > 256 ? 256 : size, fp);
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_tar.c:146:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  146 |                 fread(member, 1, size > 256 ? 256 : size, fp);
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hash_tar.c:204:1: warning: control reaches end of non-void function [-Wreturn-type]
  204 | }
      | ^
hash_extract.c: In function 'extract':
hash_extract.c:20:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   20 |     if (data = HashFileExtract(hf, file, &len)) {
      |         ^~~~
hash_extract.c: In function 'main':
hash_extract.c:74:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   74 |      if (c = strchr(file, '\n'))
      |          ^
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c trace_dump.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_sff.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c append_sff.c
hash_tar.c: In function 'main':
hash_tar.c:327:13: warning: 'hf' may be used uninitialized in this function [-Wmaybe-uninitialized]
  327 |   realloc(hf->headers, (hf->nheaders+1) *
      |           ~~^~~~~~~~~
hash_sff.c: In function 'main':
hash_sff.c:207:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  207 |      while (len = fread(block, 1, 8192, fp)) {
      |             ^~~
hash_sff.c:230:6: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  230 |      fread(hdr, 1, 31, fp);
      |      ^~~~~~~~~~~~~~~~~~~~~
hash_sff.c:258:6: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  258 |      fread(hdr, 1, 31, fpout);
      |      ^~~~~~~~~~~~~~~~~~~~~~~~
append_sff.c: In function 'main':
append_sff.c:116:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  116 |     fread(chdr, 1, 31, fpout);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr_dump.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_dump_all.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_index_hash.c
srf_dump_all.c: In function 'dump_solexa':
srf_dump_all.c:309:50: warning: pointer targets in passing argument 3 of 'dump_conf4_solexa' differ in signedness [-Wpointer-sign]
  309 |  dump_conf4_solexa(files[1], seq, chunks[0]->data+1, chunks[0]->dlength-1);
      |                                   ~~~~~~~~~~~~~~~^~
      |                                                  |
      |                                                  char *
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_extract_linear.c
srf_dump_all.c:227:58: note: expected 'signed char *' but argument is of type 'char *'
  227 | void dump_conf4_solexa(FILE *fp, char *seq, signed char *bytes, int nbytes) {
      |                                             ~~~~~~~~~~~~~^~~~~
srf_dump_all.c:320:25: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
  320 |          chunks[i]->data+2, chunks[i]->dlength-2);
      |          ~~~~~~~~~~~~~~~^~
      |                         |
      |                         char *
srf_dump_all.c:195:35: note: expected 'unsigned char *' but argument is of type 'char *'
  195 |      int baseline, unsigned char *bytes, int nbytes) {
      |                    ~~~~~~~~~~~~~~~^~~~~
srf_dump_all.c:333:25: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
  333 |          chunks[i]->data+2, chunks[i]->dlength-2);
      |          ~~~~~~~~~~~~~~~^~
      |                         |
      |                         char *
srf_dump_all.c:195:35: note: expected 'unsigned char *' but argument is of type 'char *'
  195 |      int baseline, unsigned char *bytes, int nbytes) {
      |                    ~~~~~~~~~~~~~~~^~~~~
srf_dump_all.c:346:25: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
  346 |          chunks[i]->data+2, chunks[i]->dlength-2);
      |          ~~~~~~~~~~~~~~~^~
      |                         |
      |                         char *
srf_dump_all.c:195:35: note: expected 'unsigned char *' but argument is of type 'char *'
  195 |      int baseline, unsigned char *bytes, int nbytes) {
      |                    ~~~~~~~~~~~~~~~^~~~~
srf_dump_all.c: In function 'read_filter_from_file':
srf_dump_all.c:484:11: warning: variable 'lStartPos' set but not used [-Wunused-but-set-variable]
  484 |     long  lStartPos;              /* Offset of start of current line */
      |           ^~~~~~~~~
srf_dump_all.c:483:11: warning: variable 'lLineLen' set but not used [-Wunused-but-set-variable]
  483 |     long  lLineLen;               /* Current line length */
      |           ^~~~~~~~
srf_index_hash.c: In function 'main':
srf_index_hash.c:138:5: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]
  138 |     ftruncate(fileno(srf->fp), ftello(srf->fp));
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
srf_dump_all.c:506:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  506 |     fread(cFile, lFileLen, 1, input); /* Read the entire file into cFile */
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_extract_hash.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf2fastq.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf2fasta.c
srf2fastq.c: In function 'ztr2fastq':
srf2fastq.c:369:17: warning: variable 'start' set but not used [-Wunused-but-set-variable]
  369 |             int start, length;
      |                 ^~~~~
srf2fastq.c:480:21: warning: variable 'start' set but not used [-Wunused-but-set-variable]
  480 |                 int start, length;
      |                     ^~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_filter.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_info.c
In file included from /usr/include/stdio.h:871,
                 from srf_dump_all.c:37:
In function 'fprintf',
    inlined from 'read_filter_from_file' at srf_dump_all.c:566:7:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'read_filter_from_file' at srf_dump_all.c:555:7:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'get_read_filter' at srf_dump_all.c:651:6:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'get_read_filter' at srf_dump_all.c:640:6:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'get_read_filter' at srf_dump_all.c:622:6:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
srf2fastq.c:248:13: warning: 'regn' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |     regn_t *regn;
      |             ^~~~
srf_filter.c: In function 'read_filter_from_file':
srf_filter.c:164:11: warning: variable 'lStartPos' set but not used [-Wunused-but-set-variable]
  164 |     long  lStartPos;              /* Offset of start of current line */
      |           ^~~~~~~~~
srf_filter.c:163:11: warning: variable 'lLineLen' set but not used [-Wunused-but-set-variable]
  163 |     long  lLineLen;               /* Current line length */
      |           ^~~~~~~~
srf_filter.c: In function 'dump_read_filter':
srf_filter.c:457:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=]
  457 |                 printf("\tread[%d] = %s\n", hi->data.i, hi->key);
      |                                ~^           ~~~~~~~~~~
      |                                 |                   |
      |                                 int                 uint64_t {aka long unsigned int}
      |                                %ld
srf_filter.c: In function 'add_readpair_region':
srf_filter.c:587:16: warning: pointer targets in assignment from 'unsigned char *' to 'char *' differ in signedness [-Wpointer-sign]
  587 |     c.data     = data;
      |                ^
srf_filter.c: In function 'srf_filter':
srf_filter.c:699:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  699 |   while (chunk = ztr_read_chunk_hdr(in_srf->mf)) {
      |          ^~~~~
srf_filter.c:788:23: warning: left-hand operand of comma expression has no effect [-Wunused-value]
  788 |                 stderr, "Error making trace header.\nExiting.\n";
      |                       ^
srf_filter.c:788:23: warning: statement with no effect [-Wunused-value]
srf_filter.c:794:66: warning: pointer targets in passing argument 3 of 'srf_construct_trace_hdr' differ in signedness [-Wpointer-sign]
  794 |      srf_construct_trace_hdr(&out_srf->th, in_srf->th.id_prefix, trace_hdr, trace_hdr_size);
      |                                                                  ^~~~~~~~~
      |                                                                  |
      |                                                                  char *
In file included from srf_filter.c:47:
../io_lib/srf.h:146:22: note: expected 'unsigned char *' but argument is of type 'char *'
  146 |       unsigned char *header,
      |       ~~~~~~~~~~~~~~~^~~~~~
srf_info.c: In function 'partial_decode_ztr2':
srf_info.c:411:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  411 |     while (chunk = ztr_read_chunk_hdr(mf)) {
      |            ^~~~~
srf_filter.c:894:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  894 |   while (chunk = ztr_read_chunk_hdr(in_srf->mf)) {
      |          ^~~~~
srf_filter.c:980:78: warning: pointer targets in passing argument 4 of 'srf_construct_trace_body' differ in signedness [-Wpointer-sign]
  980 |   srf_construct_trace_body(&new_tb, name+strlen(in_srf->th.id_prefix), -1, mf->data, mf->size, old_tb.flags);
      |                                                                            ~~^~~~~~
      |                                                                              |
      |                                                                              char *
In file included from srf_filter.c:47:
../io_lib/srf.h:155:24: note: expected 'unsigned char *' but argument is of type 'char *'
  155 |         unsigned char *body,
      |         ~~~~~~~~~~~~~~~^~~~
srf_filter.c: In function 'read_filter_from_file':
srf_filter.c:186:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
  186 |     fread(cFile, lFileLen, 1, input); /* Read the entire file into cFile */
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
srf_dump_all.c: In function 'process_srf_to_text_files':
srf_dump_all.c:940:20: warning: '/s_' directive writing 3 bytes into a region of size between 1 and 1024 [-Wformat-overflow=]
  940 |     sprintf(fn, "%s/s_%d_%04d_dump.txt", dir, lane, tile);
      |                    ^~~
In file included from /usr/include/stdio.h:871,
                 from srf_dump_all.c:37:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1059 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:871,
                 from srf_filter.c:37:
In function 'fprintf',
    inlined from 'read_filter_from_file' at srf_filter.c:246:7:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'read_filter_from_file' at srf_filter.c:235:7:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'get_read_filter' at srf_filter.c:348:6:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'get_read_filter' at srf_filter.c:337:6:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
In function 'fprintf',
    inlined from 'get_read_filter' at srf_filter.c:319:6:
/usr/include/bits/stdio2.h:100:10: warning: '%s' directive argument is null [-Wformat-overflow=]
  100 |   return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  101 |    __va_arg_pack ());
      |    ~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_list.c
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o convert_trace  convert_trace.o ../io_lib/libstaden-read.la -lm 
srf_list.c: In function 'count_file':
srf_list.c:75:19: warning: unused variable 'data' [-Wunused-variable]
   75 |     unsigned char data[16];
      |                   ^~~~
srf_list.c:74:22: warning: unused variable 'i' [-Wunused-variable]
   74 |     int item_sz = 9, i;
      |                      ^
srf_list.c:73:11: warning: variable 'ipos' set but not used [-Wunused-but-set-variable]
   73 |     off_t ipos, skip;
      |           ^~~~
srf_list.c:72:13: warning: unused variable 'count' [-Wunused-variable]
   72 |     int64_t count = 0;
      |             ^~~~~
srf_list.c: In function 'main':
srf_list.c:158:19: warning: format '%d' expects argument of type 'int', but argument 3 has type 'int64_t' {aka 'long int'} [-Wformat=]
  158 |      printf("%s: %d sequences\n", argv[i], c);
      |                  ~^                        ~
      |                   |                        |
      |                   int                      int64_t {aka long int}
      |                  %ld
srf_filter.c: In function 'srf_filter':
srf_filter.c:970:19: warning: 'output_trace_header' may be used uninitialized in this function [-Wmaybe-uninitialized]
  970 |                 if( output_trace_header ) {
      |                   ^
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o makeSCF  makeSCF.o ../io_lib/libstaden-read.la -lm 
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o extract_seq  extract_seq.o ../io_lib/libstaden-read.la -lm 
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o extract_qual  extract_qual.o ../io_lib/libstaden-read.la -lm 
mkdir .libs
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/convert_trace convert_trace.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/makeSCF makeSCF.o  ../io_lib/.libs/libstaden-read.so -lm
creating convert_trace
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o extract_fastq  extract_fastq.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/extract_seq extract_seq.o  ../io_lib/.libs/libstaden-read.so -lm
creating makeSCF
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o index_tar  index_tar.o  -lm 
creating extract_seq
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/extract_qual extract_qual.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o scf_dump  scf_dump.o ../io_lib/libstaden-read.la -lm 
creating extract_qual
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o scf_info  scf_info.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o index_tar index_tar.o  -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/extract_fastq extract_fastq.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o scf_update  scf_update.o ../io_lib/libstaden-read.la -lm 
creating extract_fastq
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o get_comment  get_comment.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/scf_dump scf_dump.o  ../io_lib/.libs/libstaden-read.so -lm
creating scf_dump
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/scf_info scf_info.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_tar  hash_tar.o ../io_lib/libstaden-read.la -lm 
creating scf_info
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_extract  hash_extract.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/scf_update scf_update.o  ../io_lib/.libs/libstaden-read.so -lm
creating scf_update
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/get_comment get_comment.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_list  hash_list.o ../io_lib/libstaden-read.la -lm 
creating get_comment
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o trace_dump  trace_dump.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_tar hash_tar.o  ../io_lib/.libs/libstaden-read.so -lm
creating hash_tar
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_extract hash_extract.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_sff  hash_sff.o ../io_lib/libstaden-read.la -lm 
creating hash_extract
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o append_sff  append_sff.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_list hash_list.o  ../io_lib/.libs/libstaden-read.so -lm
creating hash_list
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/trace_dump trace_dump.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ztr_dump  ztr_dump.o ../io_lib/libstaden-read.la -lm 
creating trace_dump
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_dump_all  srf_dump_all.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_sff hash_sff.o  ../io_lib/.libs/libstaden-read.so -lm
creating hash_sff
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/append_sff append_sff.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_index_hash  srf_index_hash.o ../io_lib/libstaden-read.la -lm 
creating append_sff
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_extract_linear  srf_extract_linear.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/ztr_dump ztr_dump.o  ../io_lib/.libs/libstaden-read.so -lm
creating ztr_dump
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_extract_hash  srf_extract_hash.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_dump_all srf_dump_all.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_dump_all
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf2fastq  srf2fastq.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_index_hash srf_index_hash.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_index_hash
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_extract_linear srf_extract_linear.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf2fasta  srf2fasta.o ../io_lib/libstaden-read.la -lm 
creating srf_extract_linear
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_filter  srf_filter.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_extract_hash srf_extract_hash.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_extract_hash
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf2fastq srf2fastq.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_info  srf_info.o ../io_lib/libstaden-read.la -lm 
creating srf2fastq
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_list  srf_list.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf2fasta srf2fasta.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf2fasta
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_filter srf_filter.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_filter
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_info srf_info.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_info
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_list srf_list.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_list
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
Making all in tests
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.fvYv4R
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
++ dirname /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
+ cd io_lib-1.12.4
+ rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
+ make install DESTDIR=/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
Making install in io_lib
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
test -z "/usr/lib64" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64"
 /bin/sh ../libtool --mode=install /usr/bin/install -c  'libstaden-read.la' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64/libstaden-read.la'
/usr/bin/install -c .libs/libstaden-read.so.1.1.2 /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64/libstaden-read.so.1.1.2
(cd /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64 && { ln -s -f libstaden-read.so.1.1.2 libstaden-read.so.1 || { rm -f libstaden-read.so.1 && ln -s libstaden-read.so.1.1.2 libstaden-read.so.1; }; })
(cd /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64 && { ln -s -f libstaden-read.so.1.1.2 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.1.1.2 libstaden-read.so; }; })
/usr/bin/install -c .libs/libstaden-read.lai /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64/libstaden-read.la
libtool: install: warning: remember to run `libtool --finish /usr/lib64'
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
Making install in progs
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
test -z "/usr/bin" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin"
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'convert_trace' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/convert_trace'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/convert_trace /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/convert_trace
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'makeSCF' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/makeSCF'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/makeSCF /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/makeSCF
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'extract_seq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_seq'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/extract_seq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_seq
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'extract_qual' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_qual'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/extract_qual /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_qual
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'extract_fastq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_fastq'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/extract_fastq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_fastq
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'index_tar' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/index_tar'
/usr/bin/install -c index_tar /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/index_tar
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'scf_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_dump'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/scf_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_dump
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'scf_info' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_info'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/scf_info /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_info
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'scf_update' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_update'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/scf_update /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_update
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'get_comment' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/get_comment'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/get_comment /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/get_comment
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_tar' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_tar'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_tar /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_tar
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_extract' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_extract'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_extract /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_extract
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_list' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_list'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_list /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_list
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'trace_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/trace_dump'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/trace_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/trace_dump
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_sff' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_sff'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_sff /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_sff
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'append_sff' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/append_sff'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/append_sff /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/append_sff
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'ztr_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/ztr_dump'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/ztr_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/ztr_dump
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_dump_all' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_dump_all'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_dump_all /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_dump_all
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_index_hash' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_index_hash'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_index_hash /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_index_hash
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_extract_linear' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_linear'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_extract_linear /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_linear
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_extract_hash' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_hash'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_extract_hash /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_hash
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf2fastq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fastq'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf2fastq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fastq
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf2fasta' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fasta'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf2fasta /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fasta
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_filter' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_filter'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_filter /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_filter
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_info' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_info'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_info /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_info
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_list' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_list'
libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_list /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_list
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
Making install in tests
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
test -z "/usr/bin" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin"
 /usr/bin/install -c 'staden-io_lib-config' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/staden-io_lib-config'
test -z "/usr/share/man/man1" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man1"
 /usr/bin/install -c -m 644 './man/man1/srf_index_hash.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man1/srf_index_hash.1'
 /usr/bin/install -c -m 644 './man/man1/srf_info.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man1/srf_info.1'
 /usr/bin/install -c -m 644 './man/man1/srf_list.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man1/srf_list.1'
 /usr/bin/install -c -m 644 './man/man1/srf2fasta.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man1/srf2fasta.1'
 /usr/bin/install -c -m 644 './man/man1/srf2fastq.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man1/srf2fastq.1'
test -z "/usr/share/man/man3" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3"
 /usr/bin/install -c -m 644 './man/man3/read_scf_header.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read_scf_header.3'
 /usr/bin/install -c -m 644 './man/man3/read_allocate.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read_allocate.3'
 /usr/bin/install -c -m 644 './man/man3/ExperimentFile.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/ExperimentFile.3'
 /usr/bin/install -c -m 644 './man/man3/write_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/write_reading.3'
 /usr/bin/install -c -m 644 './man/man3/write_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/write_scf.3'
 /usr/bin/install -c -m 644 './man/man3/read_deallocate.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read_deallocate.3'
 /usr/bin/install -c -m 644 './man/man3/fwrite_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/fwrite_reading.3'
 /usr/bin/install -c -m 644 './man/man3/read2scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read2scf.3'
 /usr/bin/install -c -m 644 './man/man3/scf2read.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/scf2read.3'
 /usr/bin/install -c -m 644 './man/man3/fwrite_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/fwrite_scf.3'
 /usr/bin/install -c -m 644 './man/man3/write_scf_header.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/write_scf_header.3'
 /usr/bin/install -c -m 644 './man/man3/read_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read_reading.3'
 /usr/bin/install -c -m 644 './man/man3/read_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read_scf.3'
 /usr/bin/install -c -m 644 './man/man3/exp2read.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/exp2read.3'
 /usr/bin/install -c -m 644 './man/man3/fread_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/fread_reading.3'
 /usr/bin/install -c -m 644 './man/man3/read2exp.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/read2exp.3'
 /usr/bin/install -c -m 644 './man/man3/fread_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man3/fread_scf.3'
test -z "/usr/share/man/man4" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man4"
 /usr/bin/install -c -m 644 './man/man4/Read.4' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/man/man4/Read.4'
test -z "/usr/include/io_lib" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib"
 /usr/bin/install -c -m 644 'io_lib/Read.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/Read.h'
 /usr/bin/install -c -m 644 'io_lib/scf_extras.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/scf_extras.h'
 /usr/bin/install -c -m 644 'io_lib/translate.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/translate.h'
 /usr/bin/install -c -m 644 'io_lib/abi.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/abi.h'
 /usr/bin/install -c -m 644 'io_lib/fpoint.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/fpoint.h'
 /usr/bin/install -c -m 644 'io_lib/seqIOABI.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/seqIOABI.h'
 /usr/bin/install -c -m 644 'io_lib/alf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/alf.h'
 /usr/bin/install -c -m 644 'io_lib/seqIOCTF.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/seqIOCTF.h'
 /usr/bin/install -c -m 644 'io_lib/expFileIO.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/expFileIO.h'
 /usr/bin/install -c -m 644 'io_lib/plain.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/plain.h'
 /usr/bin/install -c -m 644 'io_lib/scf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/scf.h'
 /usr/bin/install -c -m 644 'io_lib/sff.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/sff.h'
 /usr/bin/install -c -m 644 'io_lib/array.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/array.h'
 /usr/bin/install -c -m 644 'io_lib/compress.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/compress.h'
 /usr/bin/install -c -m 644 'io_lib/error.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/error.h'
 /usr/bin/install -c -m 644 'io_lib/mach-io.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/mach-io.h'
 /usr/bin/install -c -m 644 'io_lib/misc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/misc.h'
 /usr/bin/install -c -m 644 'io_lib/open_trace_file.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/open_trace_file.h'
 /usr/bin/install -c -m 644 'io_lib/tar_format.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/tar_format.h'
 /usr/bin/install -c -m 644 'io_lib/traceType.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/traceType.h'
 /usr/bin/install -c -m 644 'io_lib/xalloc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/xalloc.h'
 /usr/bin/install -c -m 644 'io_lib/mFILE.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/mFILE.h'
 /usr/bin/install -c -m 644 'io_lib/stdio_hack.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/stdio_hack.h'
 /usr/bin/install -c -m 644 'io_lib/vlen.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/vlen.h'
 /usr/bin/install -c -m 644 'io_lib/hash_table.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/hash_table.h'
 /usr/bin/install -c -m 644 'io_lib/jenkins_lookup3.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/jenkins_lookup3.h'
 /usr/bin/install -c -m 644 'io_lib/os.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/os.h'
 /usr/bin/install -c -m 644 'io_lib/compression.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/compression.h'
 /usr/bin/install -c -m 644 'io_lib/ztr.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/ztr.h'
 /usr/bin/install -c -m 644 'io_lib/deflate_interlaced.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/deflate_interlaced.h'
 /usr/bin/install -c -m 644 'io_lib/srf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/srf.h'
 /usr/bin/install -c -m 644 'io_lib/pooled_alloc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/pooled_alloc.h'
 /usr/bin/install -c -m 644 'io_lib_config.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/include/io_lib/io_lib_config.h'
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
+ find /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64 -name '*.la' -exec rm -f '{}' ';'
+ /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.12.4-18.fc33 --unique-debug-suffix -1.12.4-18.fc33.riscv64 --unique-debug-src-base staden-io_lib-1.12.4-18.fc33.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/io_lib-1.12.4
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/append_sff
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/append_sff
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_fastq
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/convert_trace
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_fastq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/convert_trace
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_qual
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_qual
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_seq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/extract_seq
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/get_comment
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_extract
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/get_comment
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_extract
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_list
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_list
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_sff
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_tar
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_sff
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/hash_tar
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/index_tar
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/index_tar
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/makeSCF
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/makeSCF
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_dump
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_info
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_info
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_update
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/scf_update
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fasta
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fasta
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fastq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf2fastq
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_dump_all
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_hash
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_dump_all
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_hash
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_linear
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_extract_linear
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_filter
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_filter
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_index_hash
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_info
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_index_hash
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_info
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_list
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/srf_list
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/trace_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/trace_dump
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/ztr_dump
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64/libstaden-read.so.1.1.2
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/lib64/libstaden-read.so.1.1.2
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/bin/ztr_dump
original debug info size: 1980kB, size after compression: 1824kB
/usr/lib/rpm/sepdebugcrcfix: Updated 27 CRC32s, 0 CRC32s did match.
1828 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/staden-io_lib-config from /bin/sh to #!/usr/bin/sh
Processing files: staden-io_lib-1.12.4-18.fc33.riscv64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.uqb2bQ
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ DOCDIR=/builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/doc/staden-io_lib
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/doc/staden-io_lib
+ cp -pr README /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/doc/staden-io_lib
+ cp -pr COPYRIGHT /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/doc/staden-io_lib
+ cp -pr CHANGES /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/doc/staden-io_lib
+ cp -pr docs/ /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64/usr/share/doc/staden-io_lib
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: libstaden-read.so.1()(64bit) staden-io_lib = 1.12.4-18.fc33 staden-io_lib(riscv-64) = 1.12.4-18.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libcurl.so.4()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libstaden-read.so.1()(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: staden-io_lib-devel-1.12.4-18.fc33.riscv64
Provides: staden-io_lib-devel = 1.12.4-18.fc33 staden-io_lib-devel(riscv-64) = 1.12.4-18.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh libstaden-read.so.1()(64bit)
Processing files: staden-io_lib-debugsource-1.12.4-18.fc33.riscv64
Provides: staden-io_lib-debugsource = 1.12.4-18.fc33 staden-io_lib-debugsource(riscv-64) = 1.12.4-18.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: staden-io_lib-debuginfo-1.12.4-18.fc33.riscv64
Provides: debuginfo(build-id) = 0431734308e563b4ad04fc177a531951ec2724d3 debuginfo(build-id) = 04bcc59f09d0932f5f4d5cb65aaab13d91acfa69 debuginfo(build-id) = 0d22c1d31513b9ff90246759b1ec070e2cf54047 debuginfo(build-id) = 137fb26b8a669a6c076c2702fb278088cc575ce4 debuginfo(build-id) = 262609118b222f8204ea0e72500c574d7ccf2b5d debuginfo(build-id) = 2861c275324d4e4f708a56948f2e9226bcdd04bf debuginfo(build-id) = 2adbbf455d4e19d4e2ce45258730614693d99ddf debuginfo(build-id) = 34df3d7d5fa5398838b20184672c6159b211d7b5 debuginfo(build-id) = 3cd8636ecf85e7593d7f83e4b0b0af97fded6e6b debuginfo(build-id) = 3d70759df6ff483ba9a312f6e08572e561bd4a8a debuginfo(build-id) = 41fc40d7ccc4243ef568fb387bcbf7076d39bc5d debuginfo(build-id) = 532a7b098d3dd073b72903f28a5ab9a27db4f49f debuginfo(build-id) = 534c27c44e6adece2c639cf78cfe873d2eaa9aa8 debuginfo(build-id) = 5c5af428364af8450a857106eb10e324c2d108bd debuginfo(build-id) = 721432b9fcf05ace896926549d97b334d1297b50 debuginfo(build-id) = 7895f3b48fe0acb7e0bccf45f7a11b12569a32b3 debuginfo(build-id) = 853ddb5ea77a775df7e3f0a6a0e70738b0e3b37a debuginfo(build-id) = 9710265b9fd34b0c48a75feafff4e1bd9c711ef2 debuginfo(build-id) = 9fb6f657863b3d910d34252e20d6401eef5eac30 debuginfo(build-id) = a72c23709a31a52b971049850f178d78ed45a7b9 debuginfo(build-id) = b7659dab54a47eede7565c087b40ba7867c8953e debuginfo(build-id) = d356df73a2a24bc898ae5fce97ca2c15a4fcd260 debuginfo(build-id) = d843c9dc09b1b35f9aed60a8dd11e9349fdc6c01 debuginfo(build-id) = eb974d59eb878fc202b934ef95733773efe1dae6 debuginfo(build-id) = ef51f12f5fe5616917a1093607f40c7ac311ac05 debuginfo(build-id) = efb24c3810dfbced7ceb9c6591e35803fdd8ef54 debuginfo(build-id) = f1507cf0e545438ce97145ca0bc40e05f0062663 staden-io_lib-debuginfo = 1.12.4-18.fc33 staden-io_lib-debuginfo(riscv-64) = 1.12.4-18.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: staden-io_lib-debugsource(riscv-64) = 1.12.4-18.fc33
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
Wrote: /builddir/build/RPMS/staden-io_lib-devel-1.12.4-18.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-1.12.4-18.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-debugsource-1.12.4-18.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-debuginfo-1.12.4-18.fc33.riscv64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.99sN7T
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-18.fc33.riscv64
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0