Mock Version: 1.4.21
Mock Version: 1.4.21
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/apbs.spec'], chrootPath='/var/lib/mock/f33-build-203566-48188/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fc34c6700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/apbs.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
sh: /usr/bin/python: No such file or directory
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1563926400
Wrote: /builddir/build/SRPMS/apbs-1.5-4.fc33.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/apbs.spec'], chrootPath='/var/lib/mock/f33-build-203566-48188/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fc34c6700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/apbs.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
sh: /usr/bin/python: No such file or directory
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1563926400
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Pw5KtU
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf apbs-pdb2pqr-apbs-1.5
+ /usr/bin/gzip -dc /builddir/build/SOURCES/apbs-1.5.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd apbs-pdb2pqr-apbs-1.5
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ cd apbs
Patch #0 (apbs-cmake.patch):
+ echo 'Patch #0 (apbs-cmake.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -p0 --fuzz=0
patching file CMakeLists.txt
patching file src/CMakeLists.txt
patching file tools/manip/CMakeLists.txt
patching file tools/mesh/CMakeLists.txt
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.YJN4kU
+ umask 022
+ cd /builddir/build/BUILD
+ cd apbs-pdb2pqr-apbs-1.5
+ cd apbs
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -D BUILD_DOC:BOOL=ON .
-- The C compiler identification is GNU 10.0.1
-- The CXX compiler identification is GNU 10.0.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc - works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ - works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Setting project paths
-- Setting lookup paths for headers and libraries
-- Computing machine epsilon values
-- Floating point epsilon is 2.220446e-16
-- Double precision epsilon is 2.220446e-16
-- Looking for time
-- Looking for time - found
-- Looking for rand
-- Looking for rand - found
-- Looking for srand
-- Looking for srand - found
-- Inline functions enabled
-- Verbose debugging mode enabled
-- Adding apbs_generic
-- With source files nosh.c;mgparm.c;femparm.c;pbamparm.c;pbsamparm.c;pbeparm.c;bemparm.c;geoflowparm.c;apolparm.c;vacc.c;valist.c;vatom.c;vpbe.c;vcap.c;vclist.c;vstring.c;vparam.c;vgreen.c
-- With external header files nosh.h;mgparm.h;femparm.h;pbamparm.h;pbsamparm.h;pbeparm.h;bemparm.h;geoflowparm.h;apolparm.h;vacc.h;valist.h;vatom.h;vpbe.h;vcap.h;vclist.h;vstring.h;vparam.h;vgreen.h;vmatrix.h;vhal.h;vunit.h
-- With internal header files 
-- With library dependencies m;stdc++;maloc
-- Added apbs_generic
-- Adding apbs_pmgc
-- With source files buildAd.c;buildBd.c;buildGd.c;buildPd.c;cgd.c;gsd.c;matvecd.c;mgcsd.c;mgdrvd.c;mgsubd.c;mikpckd.c;mlinpckd.c;mypdec.c;newtond.c;newdrvd.c;powerd.c;smoothd.c;mgfasd.c
-- With external header files buildAd.h;buildBd.h;buildGd.h;buildPd.h;cgd.h;gsd.h;matvecd.h;mgcsd.h;mgdrvd.h;mgsubd.h;mikpckd.h;mlinpckd.h;mypdec.h;newtond.h;newdrvd.h;powerd.h;smoothd.h;mgfasd.h
-- With internal header files 
-- With library dependencies m;stdc++;maloc
-- Added apbs_pmgc
-- Adding apbs_mg
-- With source files vgrid.c;vmgrid.c;vopot.c;vpmg.c;vpmgp.c
-- With external header files vgrid.h;vmgrid.h;vopot.h;vpmg.h;vpmgp.h
-- With internal header files 
-- With library dependencies m;stdc++;maloc;apbs_generic;apbs_pmgc
-- Added apbs_mg
-- Adding apbs_routines
-- With source files routines.c
-- With external header files 
-- With internal header files 
-- With library dependencies m;stdc++;maloc
-- Added apbs_routines
-- 
--  
-- APBS Libraries: m;stdc++;maloc
-- Internal Libraries: apbs_generic;apbs_pmgc;apbs_mg;apbs_routines
--  
***************************
***************************
-- -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection
-- Building documentation enabled
-- Found Doxygen: /usr/bin/doxygen (found version "1.8.17") found components: doxygen dot 
-- Supplemental tools enabled
-- Building mesh
-- libraries: apbs
-- Building manip
-- libraries: apbs
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    LIB_SUFFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -D BUILD_DOC:BOOL=OFF .
-- Setting project paths
-- Setting lookup paths for headers and libraries
-- Computing machine epsilon values
-- Floating point epsilon is 2.220446e-16
-- Double precision epsilon is 2.220446e-16
-- Inline functions enabled
-- Verbose debugging mode enabled
-- Adding apbs_generic
-- With source files nosh.c;mgparm.c;femparm.c;pbamparm.c;pbsamparm.c;pbeparm.c;bemparm.c;geoflowparm.c;apolparm.c;vacc.c;valist.c;vatom.c;vpbe.c;vcap.c;vclist.c;vstring.c;vparam.c;vgreen.c
-- With external header files nosh.h;mgparm.h;femparm.h;pbamparm.h;pbsamparm.h;pbeparm.h;bemparm.h;geoflowparm.h;apolparm.h;vacc.h;valist.h;vatom.h;vpbe.h;vcap.h;vclist.h;vstring.h;vparam.h;vgreen.h;vmatrix.h;vhal.h;vunit.h
-- With internal header files 
-- With library dependencies m;stdc++;maloc
-- Added apbs_generic
-- Adding apbs_pmgc
-- With source files buildAd.c;buildBd.c;buildGd.c;buildPd.c;cgd.c;gsd.c;matvecd.c;mgcsd.c;mgdrvd.c;mgsubd.c;mikpckd.c;mlinpckd.c;mypdec.c;newtond.c;newdrvd.c;powerd.c;smoothd.c;mgfasd.c
-- With external header files buildAd.h;buildBd.h;buildGd.h;buildPd.h;cgd.h;gsd.h;matvecd.h;mgcsd.h;mgdrvd.h;mgsubd.h;mikpckd.h;mlinpckd.h;mypdec.h;newtond.h;newdrvd.h;powerd.h;smoothd.h;mgfasd.h
-- With internal header files 
-- With library dependencies m;stdc++;maloc
-- Added apbs_pmgc
-- Adding apbs_mg
-- With source files vgrid.c;vmgrid.c;vopot.c;vpmg.c;vpmgp.c
-- With external header files vgrid.h;vmgrid.h;vopot.h;vpmg.h;vpmgp.h
-- With internal header files 
-- With library dependencies m;stdc++;maloc;apbs_generic;apbs_pmgc
-- Added apbs_mg
-- Adding apbs_routines
-- With source files routines.c
-- With external header files 
-- With internal header files 
-- With library dependencies m;stdc++;maloc
-- Added apbs_routines
-- 
--  
-- APBS Libraries: m;stdc++;maloc
-- Internal Libraries: apbs_generic;apbs_pmgc;apbs_mg;apbs_routines
--  
***************************
***************************
-- -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection
-- Supplemental tools enabled
-- Building mesh
-- libraries: apbs
-- Building manip
-- libraries: apbs
-- Configuring done
-- Generating done
-- Build files have been written to: /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs
+ make -j8
/usr/bin/cmake -S/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs -B/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/CMakeFiles /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make  -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/depend
make  -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/depend
make  -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/depend
make  -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/CMakeFiles/apbs_mg.dir/DependInfo.cmake --color=
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake --color=
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake --color=
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake --color=
Scanning dependencies of target apbs_mg
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make  -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/build
Scanning dependencies of target apbs_routines
Scanning dependencies of target apbs_generic
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make  -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/build
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make  -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/build
Scanning dependencies of target apbs_pmgc
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make  -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
[  1%] Building C object src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/nosh.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c
[  2%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_mg.dir/vmgrid.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vmgrid.c
[  5%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o
[  5%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_mg.dir/vopot.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vopot.c
[  6%] Building C object src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_mg.dir/vpmg.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/mgparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/mgparm.c
[  7%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_mg.dir/vgrid.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c
[  8%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o
[ 10%] Building C object src/CMakeFiles/apbs_routines.dir/routines.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_routines.dir/routines.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vmgrid.c: In function 'Vmgrid_addGrid':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vmgrid.c:198:12: warning: unused variable 'tgrad' [-Wunused-variable]
  198 |     double tgrad[3];
      |            ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vmgrid.c:197:15: warning: unused variable 'rc' [-Wunused-variable]
  197 |     int i, j, rc;
      |               ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vmgrid.c:197:12: warning: unused variable 'j' [-Wunused-variable]
  197 |     int i, j, rc;
      |            ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vmgrid.c:197:9: warning: unused variable 'i' [-Wunused-variable]
  197 |     int i, j, rc;
      |         ^
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c: In function 'VbuildA':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:61:5: note: in expansion of macro 'MAT2'
   61 |     MAT2(ac, *nx * *ny * *nz, 14);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vopot.c: In function 'Vopot_curvature':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vopot.c:219:26: warning: variable 'eps_w' set but not used [-Wunused-but-set-variable]
  219 |     double u, T, charge, eps_w, xkappa, dist, size, val, *position, zkappa2;
      |                          ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vopot.c:219:18: warning: variable 'charge' set but not used [-Wunused-but-set-variable]
  219 |     double u, T, charge, eps_w, xkappa, dist, size, val, *position, zkappa2;
      |                  ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vopot.c:219:15: warning: variable 'T' set but not used [-Wunused-but-set-variable]
  219 |     double u, T, charge, eps_w, xkappa, dist, size, val, *position, zkappa2;
      |               ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c: In function 'VbuildA_fv':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:162:5: note: in expansion of macro 'MAT3'
  162 |     MAT3(gzcf, *nx, *ny,   2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gycf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:161:5: note: in expansion of macro 'MAT3'
  161 |     MAT3(gycf, *nx, *nz,   2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:160:5: note: in expansion of macro 'MAT3'
  160 |     MAT3(gxcf, *ny, *nz,   2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:159:5: note: in expansion of macro 'MAT3'
  159 |     MAT3(  oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:158:5: note: in expansion of macro 'MAT3'
  158 |     MAT3(  oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:157:5: note: in expansion of macro 'MAT3'
  157 |     MAT3(  uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a3cf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:156:5: note: in expansion of macro 'MAT3'
  156 |     MAT3(a3cf, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a2cf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:155:5: note: in expansion of macro 'MAT3'
  155 |     MAT3(a2cf, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a1cf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:154:5: note: in expansion of macro 'MAT3'
  154 |     MAT3(a1cf, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:153:5: note: in expansion of macro 'MAT3'
  153 |     MAT3(  oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_ccf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:152:5: note: in expansion of macro 'MAT3'
  152 |     MAT3( ccf, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:151:5: note: in expansion of macro 'MAT3'
  151 |     MAT3(  cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:150:5: note: in expansion of macro 'MAT3'
  150 |     MAT3( fcf, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildAd.c:149:5: note: in expansion of macro 'MAT3'
  149 |     MAT3(  fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c: In function 'Vgrid_readDXBIN':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c:816:6: warning: variable 'isBinary' set but not used [-Wunused-but-set-variable]
  816 |  int isBinary = 0;
      |      ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c:813:18: warning: unused variable 'itmp' [-Wunused-variable]
  813 |  size_t i, j, k, itmp, u;
      |                  ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c: In function 'Vgrid_writeUHBD':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c:1697:36: warning: variable 'hy' set but not used [-Wunused-but-set-variable]
 1697 |     double xmin, ymin, zmin, hzed, hy, hx;
      |                                    ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c:1697:30: warning: variable 'hzed' set but not used [-Wunused-but-set-variable]
 1697 |     double xmin, ymin, zmin, hzed, hy, hx;
      |                              ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_ctor2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'loadDielMaps':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:157:61: warning: variable 'zkappa2' set but not used [-Wunused-but-set-variable]
  157 |     double ionConc[MAXION], ionQ[MAXION], ionRadii[MAXION], zkappa2, zks2;
      |                                                             ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:296:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  296 |                 for (ii=0; ii<(nx*ny*nz); ii++)
      |                 ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:298:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  298 |                     sum = sum*hx*hy*hzed;
      |                     ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:331:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  331 |         for (ii=0; ii<(nx*ny*nz); ii++)
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:333:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  333 |           sum = sum*hx*hy*hzed;
      |           ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:420:17: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  420 |                 for (ii=0; ii<(nx*ny*nz); ii++)
      |                 ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:422:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  422 |                     sum = sum*hx*hy*hzed;
      |                     ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:454:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  454 |         for (ii=0; ii<(nx*ny*nz); ii++)
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:456:11: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  456 |           sum = sum*hx*hy*hzed;
      |           ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c: In function 'Vgrid_readDXBIN':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vgrid.c:853:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  853 |   fgets(tok, VMAX_BUFSIZE, fd);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c: In function 'NOsh_setupCalcGEOFLOWMANUAL':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:2676:15: warning: variable 'apolparm' set but not used [-Wunused-but-set-variable]
 2676 |     APOLparm *apolparm = VNULL;
      |               ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'initMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:1234:12: warning: variable 'iparm' set but not used [-Wunused-but-set-variable]
 1234 |            iparm,
      |            ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'energyMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:1576:13: warning: variable 'mgparm' set but not used [-Wunused-but-set-variable]
 1576 |     MGparm *mgparm;
      |             ^~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:77,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:57:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c: At top level:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function]
  169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function]
  171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:78,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:57:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function]
  251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function]
  260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function]
  269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function]
  278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function]
  287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function]
  296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function]
  305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function]
  314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function]
  323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function]
  332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function]
  341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function]
  350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function]
  359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:79,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:57:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function]
  199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function]
  208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function]
  217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function]
  226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function]
  235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'writematMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:1795:10: warning: variable 'mxtype' set but not used [-Wunused-but-set-variable]
 1795 |     char mxtype[3];
      |          ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_qmEnergySMPBE':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1503:12: warning: variable 'zks2' set but not used [-Wunused-but-set-variable]
 1503 |            zks2;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_qfEnergyPoint':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1712:13: warning: variable 'pvec' set but not used [-Wunused-but-set-variable]
 1712 |     double *pvec;
      |             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1709:24: warning: variable 'zmax' set but not used [-Wunused-but-set-variable]
 1709 |     double xmax, ymax, zmax, xmin, ymin, zmin, hx, hy, hzed, ifloat, jfloat;
      |                        ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1709:18: warning: variable 'ymax' set but not used [-Wunused-but-set-variable]
 1709 |     double xmax, ymax, zmax, xmin, ymin, zmin, hx, hy, hzed, ifloat, jfloat;
      |                  ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1709:12: warning: variable 'xmax' set but not used [-Wunused-but-set-variable]
 1709 |     double xmax, ymax, zmax, xmin, ymin, zmin, hx, hy, hzed, ifloat, jfloat;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_qfAtomEnergy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1794:36: warning: variable 'zmax' set but not used [-Wunused-but-set-variable]
 1794 |     double xmax, xmin, ymax, ymin, zmax, zmin, hx, hy, hzed, ifloat, jfloat;
      |                                    ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1794:24: warning: variable 'ymax' set but not used [-Wunused-but-set-variable]
 1794 |     double xmax, xmin, ymax, ymin, zmax, zmin, hx, hy, hzed, ifloat, jfloat;
      |                        ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1794:12: warning: variable 'xmax' set but not used [-Wunused-but-set-variable]
 1794 |     double xmax, xmin, ymax, ymin, zmax, zmin, hx, hy, hzed, ifloat, jfloat;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'focusFillBound':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1953:12: warning: variable 'charge' set but not used [-Wunused-but-set-variable]
 1953 |            charge,
      |            ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1952:13: warning: variable 'apos' set but not used [-Wunused-but-set-variable]
 1952 |            *apos,
      |             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1951:12: warning: variable 'size' set but not used [-Wunused-but-set-variable]
 1951 |            size,
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1950:12: warning: variable 'xkappa' set but not used [-Wunused-but-set-variable]
 1950 |            xkappa,
      |            ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcfl2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2668:40: warning: variable 'qzy' set but not used [-Wunused-but-set-variable]
 2668 |     double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz;
      |                                        ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2668:36: warning: variable 'qzx' set but not used [-Wunused-but-set-variable]
 2668 |     double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz;
      |                                    ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2668:24: warning: variable 'qyx' set but not used [-Wunused-but-set-variable]
 2668 |     double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz;
      |                        ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcCalcOrig':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2832:34: warning: unused variable 'debye' [-Wunused-variable]
 2832 |     double *dipole, *quadrupole, debye, eps_p;
      |                                  ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2832:22: warning: variable 'quadrupole' set but not used [-Wunused-but-set-variable]
 2832 |     double *dipole, *quadrupole, debye, eps_p;
      |                      ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2832:13: warning: variable 'dipole' set but not used [-Wunused-but-set-variable]
 2832 |     double *dipole, *quadrupole, debye, eps_p;
      |             ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcflnew':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3454: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
 3454 | #pragma omp parallel for default(shared) private(igrid,iatom,dist)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3464: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
 3464 | #pragma omp parallel for default(shared) private(igrid,iatom,dist)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'printApolForce':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3415:31: warning: variable 'eps_p' set but not used [-Wunused-but-set-variable]
 3415 |     double dist, pre1, eps_w, eps_p, T, xkappa;
      |                               ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:3477:12: warning: variable 'scalar' set but not used [-Wunused-but-set-variable]
 3477 |            scalar,
      |            ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3410:29: warning: unused variable 'z1' [-Wunused-variable]
 3410 |     int x0, x1, y0, y1, z0, z1;
      |                             ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3410:25: warning: unused variable 'z0' [-Wunused-variable]
 3410 |     int x0, x1, y0, y1, z0, z1;
      |                         ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:3476:12: warning: variable 'temp' set but not used [-Wunused-but-set-variable]
 3476 |     double temp,
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3410:21: warning: unused variable 'y1' [-Wunused-variable]
 3410 |     int x0, x1, y0, y1, z0, z1;
      |                     ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3410:17: warning: unused variable 'y0' [-Wunused-variable]
 3410 |     int x0, x1, y0, y1, z0, z1;
      |                 ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3410:13: warning: unused variable 'x1' [-Wunused-variable]
 3410 |     int x0, x1, y0, y1, z0, z1;
      |             ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3410:9: warning: unused variable 'x0' [-Wunused-variable]
 3410 |     int x0, x1, y0, y1, z0, z1;
      |         ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3409:13: warning: unused variable 'k' [-Wunused-variable]
 3409 |     int i,j,k, iatom, igrid;
      |             ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3409:11: warning: unused variable 'j' [-Wunused-variable]
 3409 |     int i,j,k, iatom, igrid;
      |           ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3409:9: warning: unused variable 'i' [-Wunused-variable]
 3409 |     int i,j,k, iatom, igrid;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vopot.c:269:23: warning: 'val' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |                     u = u + val;
      |                     ~~^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'multipolebc':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3492:19: warning: variable 'kr3' set but not used [-Wunused-but-set-variable]
 3492 |     double kr,kr2,kr3;
      |                   ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcfl_sdh':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'initAPOL':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3608:40: warning: variable 'qzy' set but not used [-Wunused-but-set-variable]
 3608 |     double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz;
      |                                        ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3608:36: warning: variable 'qzx' set but not used [-Wunused-but-set-variable]
 3608 |     double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz;
      |                                    ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3608:24: warning: variable 'qyx' set but not used [-Wunused-but-set-variable]
 3608 |     double qxx,qxy,qxz,qyx,qyy,qyz,qzx,qzy,qzz;
      |                        ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4488:12: warning: variable 'sav' set but not used [-Wunused-but-set-variable]
 4488 |            sav,         /**< @todo document */
      |            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3604:22: warning: unused variable 'quadrupole' [-Wunused-variable]
 3604 |     double *dipole, *quadrupole;
      |                      ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3604:13: warning: unused variable 'dipole' [-Wunused-variable]
 3604 |     double *dipole, *quadrupole;
      |             ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4487:12: warning: variable 'sasa' set but not used [-Wunused-but-set-variable]
 4487 |     double sasa,        /**< @todo document */
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4481:12: warning: unused variable 'ts' [-Wunused-variable]
 4481 |     time_t ts;      /**< Temporary timing variable for debugging (PCE) */
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcfl_mdh':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3875:41: warning: variable 'eps_p' set but not used [-Wunused-but-set-variable]
 3875 |     double size, charge, xkappa, eps_w, eps_p, T, pre1, dist;
      |                                         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3874:22: warning: unused variable 'quadrupole' [-Wunused-variable]
 3874 |     double *dipole, *quadrupole;
      |                      ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3874:13: warning: unused variable 'dipole' [-Wunused-variable]
 3874 |     double *dipole, *quadrupole;
      |             ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcfl_mem':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4008:24: warning: unused variable 'edge_L' [-Wunused-variable]
 4008 |     double A, B, C, D, edge_L, l;
      |                        ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4007:38: warning: unused variable 'z_shift' [-Wunused-variable]
 4007 |     double dist, val, z_low, z_high, z_shift;
      |                                      ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4007:12: warning: unused variable 'dist' [-Wunused-variable]
 4007 |     double dist, val, z_low, z_high, z_shift;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'forceAPOL':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4745:13: warning: unused variable 'apos' [-Wunused-variable]
 4745 |            *apos;
      |             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4729:46: warning: unused variable 'ts_sub' [-Wunused-variable]
 4729 |                          time_t ts, ts_main, ts_sub;
      |                                              ^~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:77,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:70,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: At top level:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.h:169:20: warning: 'GEOFLOWparm_parseVDW' declared 'static' but never defined [-Wunused-function]
  169 | VPRIVATE Vrc_Codes GEOFLOWparm_parseVDW(GEOFLOWparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.h:171:20: warning: 'GEOFLOWparm_parseETOL' declared 'static' but never defined [-Wunused-function]
  171 | VPRIVATE Vrc_Codes GEOFLOWparm_parseETOL(GEOFLOWparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:78,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:70,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:251:20: warning: 'PBAMparm_parseSalt' declared 'static' but never defined [-Wunused-function]
  251 | VPRIVATE Vrc_Codes PBAMparm_parseSalt(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:260:20: warning: 'PBAMparm_parseRunType' declared 'static' but never defined [-Wunused-function]
  260 | VPRIVATE Vrc_Codes PBAMparm_parseRunType(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:269:20: warning: 'PBAMparm_parseRunName' declared 'static' but never defined [-Wunused-function]
  269 | VPRIVATE Vrc_Codes PBAMparm_parseRunName(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:278:20: warning: 'PBAMparm_parseRandorient' declared 'static' but never defined [-Wunused-function]
  278 | VPRIVATE Vrc_Codes PBAMparm_parseRandorient(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:287:20: warning: 'PBAMparm_parsePBCS' declared 'static' but never defined [-Wunused-function]
  287 | VPRIVATE Vrc_Codes PBAMparm_parsePBCS(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:296:20: warning: 'PBAMparm_parseUnits' declared 'static' but never defined [-Wunused-function]
  296 | VPRIVATE Vrc_Codes PBAMparm_parseUnits(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:305:20: warning: 'PBAMparm_parse3Dmap' declared 'static' but never defined [-Wunused-function]
  305 | VPRIVATE Vrc_Codes PBAMparm_parse3Dmap(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:314:20: warning: 'PBAMparm_parseGrid2D' declared 'static' but never defined [-Wunused-function]
  314 | VPRIVATE Vrc_Codes PBAMparm_parseGrid2D(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:323:20: warning: 'PBAMparm_parseDX' declared 'static' but never defined [-Wunused-function]
  323 | VPRIVATE Vrc_Codes PBAMparm_parseDX(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:332:20: warning: 'PBAMparm_parseGridPts' declared 'static' but never defined [-Wunused-function]
  332 | VPRIVATE Vrc_Codes PBAMparm_parseGridPts(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:341:20: warning: 'PBAMparm_parseTermcombine' declared 'static' but never defined [-Wunused-function]
  341 | VPRIVATE Vrc_Codes PBAMparm_parseTermcombine(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:350:20: warning: 'PBAMparm_parseDiff' declared 'static' but never defined [-Wunused-function]
  350 | VPRIVATE Vrc_Codes PBAMparm_parseDiff(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:359:20: warning: 'PBAMparm_parseXYZ' declared 'static' but never defined [-Wunused-function]
  359 | VPRIVATE Vrc_Codes PBAMparm_parseXYZ(PBAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:79,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:70,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:199:20: warning: 'PBSAMparm_parseTolsp' declared 'static' but never defined [-Wunused-function]
  199 | VPRIVATE Vrc_Codes PBSAMparm_parseTolsp(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:208:20: warning: 'PBSAMparm_parseSurf' declared 'static' but never defined [-Wunused-function]
  208 | VPRIVATE Vrc_Codes PBSAMparm_parseSurf(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:217:20: warning: 'PBSAMparm_parseImat' declared 'static' but never defined [-Wunused-function]
  217 | VPRIVATE Vrc_Codes PBSAMparm_parseImat(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:226:20: warning: 'PBSAMparm_parseExp' declared 'static' but never defined [-Wunused-function]
  226 | VPRIVATE Vrc_Codes PBSAMparm_parseExp(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:235:20: warning: 'PBSAMparm_parseMSMS' declared 'static' but never defined [-Wunused-function]
  235 | VPRIVATE Vrc_Codes PBSAMparm_parseMSMS(PBSAMparm *thee, Vio *sock);
      |                    ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:93,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:811:15: warning: 'bcolcomp' declared 'static' but never defined [-Wunused-function]
  811 | VPRIVATE void bcolcomp(
      |               ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:834:15: warning: 'bcolcomp2' declared 'static' but never defined [-Wunused-function]
  834 | VPRIVATE void bcolcomp2(
      |               ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:863:15: warning: 'bcolcomp3' declared 'static' but never defined [-Wunused-function]
  863 | VPRIVATE void bcolcomp3(
      |               ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:885:15: warning: 'bcolcomp4' declared 'static' but never defined [-Wunused-function]
  885 | VPRIVATE void bcolcomp4(
      |               ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:910:15: warning: 'pcolcomp' declared 'static' but never defined [-Wunused-function]
  910 | VPRIVATE void pcolcomp(
      |               ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:933:17: warning: 'bspline2' declared 'static' but never defined [-Wunused-function]
  933 | VPRIVATE double bspline2(
      |                 ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:942:17: warning: 'dbspline2' declared 'static' but never defined [-Wunused-function]
  942 | VPRIVATE double dbspline2(
      |                 ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:951:17: warning: 'VFCHI4' declared 'static' but never defined [-Wunused-function]
  951 | VPRIVATE double VFCHI4(
      |                 ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:961:17: warning: 'bspline4' declared 'static' but never defined [-Wunused-function]
  961 | VPRIVATE double bspline4(
      |                 ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:970:17: warning: 'dbspline4' declared 'static' but never defined [-Wunused-function]
  970 | VPRIVATE double dbspline4(
      |                 ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:979:17: warning: 'd2bspline4' declared 'static' but never defined [-Wunused-function]
  979 | VPRIVATE double d2bspline4(
      |                 ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:988:17: warning: 'd3bspline4' declared 'static' but never defined [-Wunused-function]
  988 | VPRIVATE double d3bspline4(
      |                 ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:998:17: warning: 'Vpmg_polarizEnergy' declared 'static' but never defined [-Wunused-function]
  998 | VPRIVATE double Vpmg_polarizEnergy(
      |                 ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1009:17: warning: 'Vpmg_qfEnergyPoint' declared 'static' but never defined [-Wunused-function]
 1009 | VPRIVATE double Vpmg_qfEnergyPoint(
      |                 ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1020:17: warning: 'Vpmg_qfEnergyVolume' declared 'static' but never defined [-Wunused-function]
 1020 | VPRIVATE double Vpmg_qfEnergyVolume(
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1031:15: warning: 'Vpmg_splineSelect' declared 'static' but never defined [-Wunused-function]
 1031 | VPRIVATE void Vpmg_splineSelect(
      |               ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1047:15: warning: 'focusFillBound' declared 'static' but never defined [-Wunused-function]
 1047 | VPRIVATE void focusFillBound(
      |               ^~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1058:15: warning: 'bcfl1' declared 'static' but never defined [-Wunused-function]
 1058 | VPRIVATE void bcfl1(
      |               ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1080:15: warning: 'bcfl2' declared 'static' but never defined [-Wunused-function]
 1080 | VPRIVATE void bcfl2(
      |               ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1109:15: warning: 'multipolebc' declared 'static' but never defined [-Wunused-function]
 1109 | VPRIVATE void multipolebc(
      |               ^~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1126:17: warning: 'bcfl1sp' declared 'static' but never defined [-Wunused-function]
 1126 | VPRIVATE double bcfl1sp(
      |                 ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1139:15: warning: 'bcCalc' declared 'static' but never defined [-Wunused-function]
 1139 | VPRIVATE void bcCalc(
      |               ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1147:15: warning: 'fillcoCoef' declared 'static' but never defined [-Wunused-function]
 1147 | VPRIVATE void fillcoCoef(
      |               ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1155:15: warning: 'fillcoCoefMap' declared 'static' but never defined [-Wunused-function]
 1155 | VPRIVATE void fillcoCoefMap(
      |               ^~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1164:15: warning: 'fillcoCoefMol' declared 'static' but never defined [-Wunused-function]
 1164 | VPRIVATE void fillcoCoefMol(
      |               ^~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1173:15: warning: 'fillcoCoefMolIon' declared 'static' but never defined [-Wunused-function]
 1173 | VPRIVATE void fillcoCoefMolIon(
      |               ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1182:15: warning: 'fillcoCoefMolDiel' declared 'static' but never defined [-Wunused-function]
 1182 | VPRIVATE void fillcoCoefMolDiel(
      |               ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1191:15: warning: 'fillcoCoefMolDielNoSmooth' declared 'static' but never defined [-Wunused-function]
 1191 | VPRIVATE void fillcoCoefMolDielNoSmooth(
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1208:15: warning: 'fillcoCoefMolDielSmooth' declared 'static' but never defined [-Wunused-function]
 1208 | VPRIVATE void fillcoCoefMolDielSmooth(
      |               ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1217:15: warning: 'fillcoCoefSpline' declared 'static' but never defined [-Wunused-function]
 1217 | VPRIVATE void fillcoCoefSpline(
      |               ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1226:15: warning: 'fillcoCoefSpline3' declared 'static' but never defined [-Wunused-function]
 1226 | VPRIVATE void fillcoCoefSpline3(
      |               ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1235:15: warning: 'fillcoCoefSpline4' declared 'static' but never defined [-Wunused-function]
 1235 | VPRIVATE void fillcoCoefSpline4(
      |               ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1244:20: warning: 'fillcoCharge' declared 'static' but never defined [-Wunused-function]
 1244 | VPRIVATE Vrc_Codes fillcoCharge(
      |                    ^~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1253:20: warning: 'fillcoChargeMap' declared 'static' but never defined [-Wunused-function]
 1253 | VPRIVATE Vrc_Codes fillcoChargeMap(
      |                    ^~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1261:15: warning: 'fillcoChargeSpline1' declared 'static' but never defined [-Wunused-function]
 1261 | VPRIVATE void fillcoChargeSpline1(
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1269:15: warning: 'fillcoChargeSpline2' declared 'static' but never defined [-Wunused-function]
 1269 | VPRIVATE void fillcoChargeSpline2(
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1277:15: warning: 'fillcoPermanentMultipole' declared 'static' but never defined [-Wunused-function]
 1277 | VPRIVATE void fillcoPermanentMultipole(
      |               ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function]
 1285 | VPRIVATE void fillcoInducedDipole(
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function]
 1294 | VPRIVATE void fillcoNLInducedDipole(
      |               ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1304:15: warning: 'extEnergy' declared 'static' but never defined [-Wunused-function]
 1304 | VPRIVATE void extEnergy(
      |               ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1317:15: warning: 'qfForceSpline1' declared 'static' but never defined [-Wunused-function]
 1317 | VPRIVATE void qfForceSpline1(
      |               ^~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1327:15: warning: 'qfForceSpline2' declared 'static' but never defined [-Wunused-function]
 1327 | VPRIVATE void qfForceSpline2(
      |               ^~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1337:15: warning: 'qfForceSpline4' declared 'static' but never defined [-Wunused-function]
 1337 | VPRIVATE void qfForceSpline4(
      |               ^~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1351:15: warning: 'zlapSolve' declared 'static' but never defined [-Wunused-function]
 1351 | VPRIVATE void zlapSolve(
      |               ^~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1364:15: warning: 'markSphere' declared 'static' but never defined [-Wunused-function]
 1364 | VPRIVATE void markSphere(
      |               ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1384:17: warning: 'Vpmg_qmEnergySMPBE' declared 'static' but never defined [-Wunused-function]
 1384 | VPRIVATE double Vpmg_qmEnergySMPBE(Vpmg *thee, int extFlag);
      |                 ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1385:17: warning: 'Vpmg_qmEnergyNONLIN' declared 'static' but never defined [-Wunused-function]
 1385 | VPRIVATE double Vpmg_qmEnergyNONLIN(Vpmg *thee, int extFlag);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcfl_map':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4177:38: warning: variable 'hzed' set but not used [-Wunused-but-set-variable]
 4177 |     double position[3], pot, hx, hy, hzed;
      |                                      ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4177:34: warning: variable 'hy' set but not used [-Wunused-but-set-variable]
 4177 |     double position[3], pot, hx, hy, hzed;
      |                                  ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4177:30: warning: variable 'hx' set but not used [-Wunused-but-set-variable]
 4177 |     double position[3], pot, hx, hy, hzed;
      |                              ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4176:11: warning: unused variable 'pbe' [-Wunused-variable]
 4176 |     Vpbe *pbe;
      |           ^~~
[ 11%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/femparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/femparm.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCoefMap':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4492:46: warning: unused variable 'pot' [-Wunused-variable]
 4492 |     double ionstr, position[3], tkappa, eps, pot, hx, hy, hzed;
      |                                              ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCoefMolIon':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4638:16: warning: variable 'surfMeth' set but not used [-Wunused-but-set-variable]
 4638 |     Vsurf_Meth surfMeth;
      |                ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4630:11: warning: variable 'acc' set but not used [-Wunused-but-set-variable]
 4630 |     Vacc *acc;
      |           ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCoefMolDielNoSmooth':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4789: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
 4789 | #pragma omp parallel for default(shared) private(iatom,atom,apos,arad)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4849: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
 4849 | #pragma omp parallel for default(shared) private(iatom,atom,area,asurf,ipt,position)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:4746:30: warning: unused variable 'deps' [-Wunused-variable]
 4746 |     double srad, epsw, epsp, deps, area;
      |                              ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCoefSpline':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5031:47: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable]
 5031 |     double dx2, dy2, dz2, stot2, itot2, rtot, rtot2, splineWin, w3i;
      |                                               ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCharge':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5289:15: warning: unused variable 'rc' [-Wunused-variable]
 5289 |     Vrc_Codes rc;
      |               ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoChargeMap':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5346:49: warning: variable 'hzed' set but not used [-Wunused-but-set-variable]
 5346 |     double position[3], charge, zmagic, hx, hy, hzed;
      |                                                 ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5346:45: warning: variable 'hy' set but not used [-Wunused-but-set-variable]
 5346 |     double position[3], charge, zmagic, hx, hy, hzed;
      |                                             ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5346:41: warning: variable 'hx' set but not used [-Wunused-but-set-variable]
 5346 |     double position[3], charge, zmagic, hx, hy, hzed;
      |                                         ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_force':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5829:12: warning: unused variable 'npF' [-Wunused-variable]
 5829 |     double npF[3];                  /* Non-polar boundary force */
      |            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_ibForce':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5854:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable]
 5854 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2;
      |                        ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5854:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable]
 5854 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2;
      |                  ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5854:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable]
 5854 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:5848:13: warning: variable 'alist' set but not used [-Wunused-but-set-variable]
 5848 |     Valist *alist;
      |             ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_dbForce':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6019:55: warning: variable 'kT' set but not used [-Wunused-but-set-variable]
 6019 |     double rtot, dx, gpos[3], tgrad[3], dbFmag, epsw, kT;
      |                                                       ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6019:18: warning: variable 'dx' set but not used [-Wunused-but-set-variable]
 6019 |     double rtot, dx, gpos[3], tgrad[3], dbFmag, epsw, kT;
      |                  ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6018:66: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable]
 6018 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp;
      |                                                                  ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6018:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable]
 6018 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp;
      |                        ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6018:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable]
 6018 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp;
      |                  ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6018:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable]
 6018 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax, rtot2, epsp;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'qfForceSpline2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6453:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable]
 6453 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax;
      |                        ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6453:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable]
 6453 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax;
      |                  ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6453:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable]
 6453 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'qfForceSpline4':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6576:15: warning: unused variable 'k' [-Wunused-variable]
 6576 |     int i, j, k, ii, jj, kk;
      |               ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6576:12: warning: unused variable 'j' [-Wunused-variable]
 6576 |     int i, j, k, ii, jj, kk;
      |            ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6568:24: warning: variable 'zlen' set but not used [-Wunused-but-set-variable]
 6568 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax;
      |                        ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6568:18: warning: variable 'ylen' set but not used [-Wunused-but-set-variable]
 6568 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax;
      |                  ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6568:12: warning: variable 'xlen' set but not used [-Wunused-but-set-variable]
 6568 |     double xlen, ylen, zlen, xmin, ymin, zmin, xmax, ymax, zmax;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'markFrac':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6692:39: warning: variable 'a000' set but not used [-Wunused-but-set-variable]
 6692 |     double dx, dx2, dy, dy2, dz, dz2, a000, a001, a010, a100, r2;
      |                                       ^~~~
[ 12%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'zlapSolve':
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_mg.dir/vpmgp.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmgp.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6912:12: warning: unused variable 'norm' [-Wunused-variable]
 6912 |     double norm, coef, proj, eigx, eigy, eigz;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'Vpmg_solveLaplace':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7044:35: warning: variable 'n' set but not used [-Wunused-but-set-variable]
 7044 |     int i, j, k, ijk, nx, ny, nz, n, dilo, dihi, djlo, djhi, dklo, dkhi;
      |                                   ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7044:18: warning: unused variable 'ijk' [-Wunused-variable]
 7044 |     int i, j, k, ijk, nx, ny, nz, n, dilo, dihi, djlo, djhi, dklo, dkhi;
      |                  ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoPermanentMultipole':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:58: warning: unused variable 'mqzz' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                                                          ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:53: warning: unused variable 'mqzy' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                                                     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:48: warning: unused variable 'mqzx' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                                                ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:43: warning: unused variable 'mqyy' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                                           ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:38: warning: unused variable 'mqyx' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                                      ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:33: warning: unused variable 'mqxx' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                                 ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:29: warning: unused variable 'muz' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                             ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:25: warning: unused variable 'muy' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:21: warning: unused variable 'mux' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                     ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:18: warning: unused variable 'mc' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |                  ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7263:12: warning: unused variable 'debye' [-Wunused-variable]
 7263 |     double debye,mc,mux,muy,muz,mqxx,mqyx,mqyy,mqzx,mqzy,mqzz;
      |            ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7262:24: warning: unused variable 'mr2' [-Wunused-variable]
 7262 |     double mir,mjr,mkr,mr2;
      |                        ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7262:20: warning: unused variable 'mkr' [-Wunused-variable]
 7262 |     double mir,mjr,mkr,mr2;
      |                    ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7262:16: warning: unused variable 'mjr' [-Wunused-variable]
 7262 |     double mir,mjr,mkr,mr2;
      |                ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7262:12: warning: unused variable 'mir' [-Wunused-variable]
 7262 |     double mir,mjr,mkr,mr2;
      |            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7258:9: warning: unused variable 'i' [-Wunused-variable]
 7258 |     int i, ii, jj, kk, nx, ny, nz, iatom;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7253:47: warning: unused variable 'qave' [-Wunused-variable]
 7253 |     double c,ux,uy,uz,qxx,qyx,qyy,qzx,qzy,qzz,qave;
      |                                               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7252:29: warning: unused variable 'quad' [-Wunused-variable]
 7252 |     double charge, *dipole,*quad;
      |                             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7252:21: warning: unused variable 'dipole' [-Wunused-variable]
 7252 |     double charge, *dipole,*quad;
      |                     ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCoefSpline4':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:9948:47: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable]
 9948 |     double dx2, dy2, dz2, stot2, itot2, rtot, rtot2, splineWin;
      |                                               ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:9946:42: warning: unused variable 'w2i' [-Wunused-variable]
 9946 |     double irad, dx, dy, dz, epsw, epsp, w2i;
      |                                          ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoPermanentInduced':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10278:9: warning: unused variable 'i' [-Wunused-variable]
10278 |     int i, ii, jj, kk, nx, ny, nz, iatom;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10273:47: warning: unused variable 'qave' [-Wunused-variable]
10273 |     double c,ux,uy,uz,qxx,qyx,qyy,qzx,qzy,qzz,qave;
      |                                               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10272:29: warning: unused variable 'quad' [-Wunused-variable]
10272 |     double charge, *dipole,*quad;
      |                             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10272:21: warning: unused variable 'dipole' [-Wunused-variable]
10272 |     double charge, *dipole,*quad;
      |                     ^~~~~~
[ 13%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'fillcoCoefSpline3':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10441:27: warning: variable 'e5' set but not used [-Wunused-but-set-variable]
10441 |     double e, e2, e3, e4, e5;
      |                           ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10439:47: warning: variable 'rtot2' set but not used [-Wunused-but-set-variable]
10439 |     double dx2, dy2, dz2, stot2, itot2, rtot, rtot2, splineWin;
      |                                               ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10437:42: warning: unused variable 'w2i' [-Wunused-variable]
10437 |     double irad, dx, dy, dz, epsw, epsp, w2i;
      |                                          ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcolcomp':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10746:55: warning: variable 'mxlv' set but not used [-Wunused-but-set-variable]
10746 |     int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv;
      |                                                       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10746:47: warning: unused variable 'maxlev' [-Wunused-variable]
10746 |     int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv;
      |                                               ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10746:39: warning: unused variable 'ierror' [-Wunused-variable]
10746 |     int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv;
      |                                       ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10746:15: warning: variable 'niwk' set but not used [-Wunused-but-set-variable]
10746 |     int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10746:9: warning: variable 'nrwk' set but not used [-Wunused-but-set-variable]
10746 |     int nrwk, niwk, nx, ny, nz, nlev, ierror, maxlev, mxlv;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10743:29: warning: unused variable 'i' [-Wunused-variable]
10743 |     int nrow, ncol, nnzero, i;
      |                             ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10743:21: warning: unused variable 'nnzero' [-Wunused-variable]
10743 |     int nrow, ncol, nnzero, i;
      |                     ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10743:15: warning: unused variable 'ncol' [-Wunused-variable]
10743 |     int nrow, ncol, nnzero, i;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10743:9: warning: unused variable 'nrow' [-Wunused-variable]
10743 |     int nrow, ncol, nnzero, i;
      |         ^~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:93,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:73:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcolcomp2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10804:5: note: in expansion of macro 'MAT2'
10804 |     MAT2(iz, 50, nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcolcomp3':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10836:5: note: in expansion of macro 'MAT2'
10836 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: In function 'bcolcomp4':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10874:5: note: in expansion of macro 'MAT3'
10874 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10873:5: note: in expansion of macro 'MAT3'
10873 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10872:5: note: in expansion of macro 'MAT3'
10872 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10871:5: note: in expansion of macro 'MAT3'
10871 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10870:5: note: in expansion of macro 'MAT3'
10870 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:10866:27: warning: variable 'nrow' set but not used [-Wunused-but-set-variable]
10866 |     int inonz, iirow, nn, nrow, ncol, nonz, irow, n;
      |                           ^~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:73:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c: At top level:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1285:15: warning: 'fillcoInducedDipole' declared 'static' but never defined [-Wunused-function]
 1285 | VPRIVATE void fillcoInducedDipole(
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.h:1294:15: warning: 'fillcoNLInducedDipole' declared 'static' but never defined [-Wunused-function]
 1294 | VPRIVATE void fillcoNLInducedDipole(
      |               ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmgp.c: In function 'Vpmgp_size':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmgp.c:204:87: warning: unused variable 'iretot' [-Wunused-variable]
  204 |     int nxf, nyf, nzf, level, num_nf_oper, num_narrc_oper, n_band, nc_band, num_band, iretot;
      |                                                                                       ^~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c: In function 'Vbuildband':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:60:5: note: in expansion of macro 'MAT2'
   60 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c: In function 'Vbuildband1_7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:128:5: note: in expansion of macro 'MAT3'
  128 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:127:5: note: in expansion of macro 'MAT3'
  127 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:126:5: note: in expansion of macro 'MAT3'
  126 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:125:5: note: in expansion of macro 'MAT3'
  125 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_acB' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:123:5: note: in expansion of macro 'MAT2'
  123 |     MAT2(acB, *lda, *ny-1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c: In function 'Vbuildband1_27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:208:5: note: in expansion of macro 'MAT3'
  208 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:207:5: note: in expansion of macro 'MAT3'
  207 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:206:5: note: in expansion of macro 'MAT3'
  206 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:205:5: note: in expansion of macro 'MAT3'
  205 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:203:5: note: in expansion of macro 'MAT3'
  203 |     MAT3( uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:202:5: note: in expansion of macro 'MAT3'
  202 |     MAT3( uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:201:5: note: in expansion of macro 'MAT3'
  201 |     MAT3( uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:200:5: note: in expansion of macro 'MAT3'
  200 |     MAT3( uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:198:5: note: in expansion of macro 'MAT3'
  198 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:197:5: note: in expansion of macro 'MAT3'
  197 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:195:5: note: in expansion of macro 'MAT3'
  195 |     MAT3( uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:194:5: note: in expansion of macro 'MAT3'
  194 |     MAT3( oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:193:5: note: in expansion of macro 'MAT3'
  193 |     MAT3( oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:192:5: note: in expansion of macro 'MAT3'
  192 |     MAT3( oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_acB' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildBd.c:190:5: note: in expansion of macro 'MAT2'
  190 |     MAT2(acB, *lda, *ny-1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:7229:16: warning: 'd3bspline4' defined but not used [-Wunused-function]
 7229 | VPUBLIC double d3bspline4(double x) {
      |                ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:6684:15: warning: 'markFrac' defined but not used [-Wunused-function]
 6684 | VPRIVATE void markFrac(
      |               ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:3868:15: warning: 'bcfl_mdh' defined but not used [-Wunused-function]
 3868 | VPRIVATE void bcfl_mdh(Vpmg *thee){
      |               ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2828:15: warning: 'bcCalcOrig' defined but not used [-Wunused-function]
 2828 | VPRIVATE void bcCalcOrig(Vpmg *thee) {
      |               ^~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:2547:17: warning: 'bcfl1sp' defined but not used [-Wunused-function]
 2547 | VPRIVATE double bcfl1sp(double size, double *apos, double charge,
      |                 ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/mg/vpmg.c:1148:17: warning: 'Vpmg_polarizEnergy' defined but not used [-Wunused-function]
 1148 | VPRIVATE double Vpmg_polarizEnergy(Vpmg *thee,
      |                 ^~~~~~~~~~~~~~~~~~
[ 15%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/pbamparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c
[ 16%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/pbsamparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c
[ 17%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/pbeparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbeparm.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c: In function 'PBAMparm_parseRandorient':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:302:17: warning: unused variable 'name' [-Wunused-variable]
  302 |     const char* name = "randorient";
      |                 ^~~~
[ 18%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/buildGd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c: In function 'PBSAMparm_ctor2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c:79:9: warning: unused variable 'i' [-Wunused-variable]
   79 |     int i;
      |         ^
In file included from /usr/include/string.h:495,
                 from /usr/include/maloc/maloc_base.h:82,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.h:68,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c:57:
In function 'strncpy',
    inlined from 'PBSAMparm_parseSurf' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c:174:8:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBSAMparm_parseImat' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c:195:8:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBSAMparm_parseExp' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbsamparm.c:210:8:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
                 from /usr/include/maloc/maloc_base.h:82,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.h:68,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:57:
In function 'strncpy',
    inlined from 'PBAMparm_parseRunType' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:279:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseRunName' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:294:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseUnits' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:341:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parse3Dmap' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:376:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseDX' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:426:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseTermcombine' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:440:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseGrid2D' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:392:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseGrid2D' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:400:7:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c: In function 'VbuildG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:59:5: note: in expansion of macro 'MAT2'
   59 |     MAT2(  ac, *nxc * *nyc * *nzc, 27);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_acFF' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:58:5: note: in expansion of macro 'MAT2'
   58 |     MAT2(acFF, *nxf * *nyf * *nzf, 27);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pcFF' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:57:5: note: in expansion of macro 'MAT2'
   57 |     MAT2(pcFF, *nxc * *nyc * *nzc, 27);
      |     ^~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseXYZ' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:640:8:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 20%] Building C object src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/bemparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c: In function 'VbuildG_1':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:211:5: note: in expansion of macro 'MAT3'
  211 |     MAT3(dPSW, *nx, *ny,  *nz);
      |     ^~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseDiff' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:488:8:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:210:5: note: in expansion of macro 'MAT3'
  210 |     MAT3(dPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:209:5: note: in expansion of macro 'MAT3'
  209 |     MAT3(dPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:208:5: note: in expansion of macro 'MAT3'
  208 |     MAT3(dPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:207:5: note: in expansion of macro 'MAT3'
  207 |     MAT3( dPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:206:5: note: in expansion of macro 'MAT3'
  206 |     MAT3( dPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:205:5: note: in expansion of macro 'MAT3'
  205 |     MAT3( dPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:204:5: note: in expansion of macro 'MAT3'
  204 |     MAT3( dPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:203:5: note: in expansion of macro 'MAT3'
  203 |     MAT3( dPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:201:5: note: in expansion of macro 'MAT3'
  201 |     MAT3(uPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:200:5: note: in expansion of macro 'MAT3'
  200 |     MAT3(uPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:199:5: note: in expansion of macro 'MAT3'
  199 |     MAT3(uPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:198:5: note: in expansion of macro 'MAT3'
  198 |     MAT3(uPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:197:5: note: in expansion of macro 'MAT3'
  197 |     MAT3( uPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:196:5: note: in expansion of macro 'MAT3'
  196 |     MAT3( uPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:195:5: note: in expansion of macro 'MAT3'
  195 |     MAT3( uPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:194:5: note: in expansion of macro 'MAT3'
  194 |     MAT3( uPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:193:5: note: in expansion of macro 'MAT3'
  193 |     MAT3( uPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:191:5: note: in expansion of macro 'MAT3'
  191 |     MAT3(oPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:190:5: note: in expansion of macro 'MAT3'
  190 |     MAT3(oPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:189:5: note: in expansion of macro 'MAT3'
  189 |     MAT3(oPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:188:5: note: in expansion of macro 'MAT3'
  188 |     MAT3(oPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:187:5: note: in expansion of macro 'MAT3'
  187 |     MAT3( oPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:186:5: note: in expansion of macro 'MAT3'
  186 |     MAT3( oPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:185:5: note: in expansion of macro 'MAT3'
  185 |     MAT3( oPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:184:5: note: in expansion of macro 'MAT3'
  184 |     MAT3( oPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:183:5: note: in expansion of macro 'MAT3'
  183 |     MAT3( oPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:181:5: note: in expansion of macro 'MAT3'
  181 |     MAT3(XuSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:180:5: note: in expansion of macro 'MAT3'
  180 |     MAT3(XuSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:179:5: note: in expansion of macro 'MAT3'
  179 |     MAT3(XuNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:178:5: note: in expansion of macro 'MAT3'
  178 |     MAT3(XuNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:177:5: note: in expansion of macro 'MAT3'
  177 |     MAT3( XuS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:176:5: note: in expansion of macro 'MAT3'
  176 |     MAT3( XuN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:175:5: note: in expansion of macro 'MAT3'
  175 |     MAT3( XuW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:174:5: note: in expansion of macro 'MAT3'
  174 |     MAT3( XuE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:172:5: note: in expansion of macro 'MAT3'
  172 |     MAT3(XoNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:171:5: note: in expansion of macro 'MAT3'
  171 |     MAT3(XoNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:169:5: note: in expansion of macro 'MAT3'
  169 |     MAT3( XuC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:167:5: note: in expansion of macro 'MAT3'
  167 |     MAT3( XoN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:166:5: note: in expansion of macro 'MAT3'
  166 |     MAT3( XoE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:165:5: note: in expansion of macro 'MAT3'
  165 |     MAT3( XoC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:163:5: note: in expansion of macro 'MAT3'
  163 |     MAT3(  oC, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:159:21: warning: variable 'nzm1' set but not used [-Wunused-but-set-variable]
  159 |     int nxm1, nym1, nzm1;
      |                     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:159:15: warning: variable 'nym1' set but not used [-Wunused-but-set-variable]
  159 |     int nxm1, nym1, nzm1;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:159:9: warning: variable 'nxm1' set but not used [-Wunused-but-set-variable]
  159 |     int nxm1, nym1, nzm1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:158:33: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable]
  158 |     int iim1, iip1, jjm1, jjp1, kkm1, kkp1;
      |                                 ^~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseTerm' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:548:8:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBAMparm_parseTerm' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbamparm.c:557:11:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1000 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c: In function 'VbuildG_7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:527:5: note: in expansion of macro 'MAT3'
  527 |     MAT3(dPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:526:5: note: in expansion of macro 'MAT3'
  526 |     MAT3(dPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:525:5: note: in expansion of macro 'MAT3'
  525 |     MAT3(dPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:524:5: note: in expansion of macro 'MAT3'
  524 |     MAT3(dPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:523:5: note: in expansion of macro 'MAT3'
  523 |     MAT3( dPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:522:5: note: in expansion of macro 'MAT3'
  522 |     MAT3( dPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:521:5: note: in expansion of macro 'MAT3'
  521 |     MAT3( dPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:520:5: note: in expansion of macro 'MAT3'
  520 |     MAT3( dPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:519:5: note: in expansion of macro 'MAT3'
  519 |     MAT3( dPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:517:5: note: in expansion of macro 'MAT3'
  517 |     MAT3(uPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:516:5: note: in expansion of macro 'MAT3'
  516 |     MAT3(uPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:515:5: note: in expansion of macro 'MAT3'
  515 |     MAT3(uPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:514:5: note: in expansion of macro 'MAT3'
  514 |     MAT3(uPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:513:5: note: in expansion of macro 'MAT3'
  513 |     MAT3( uPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:512:5: note: in expansion of macro 'MAT3'
  512 |     MAT3( uPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:511:5: note: in expansion of macro 'MAT3'
  511 |     MAT3( uPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:510:5: note: in expansion of macro 'MAT3'
  510 |     MAT3( uPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:509:5: note: in expansion of macro 'MAT3'
  509 |     MAT3( uPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:507:5: note: in expansion of macro 'MAT3'
  507 |     MAT3(oPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:506:5: note: in expansion of macro 'MAT3'
  506 |     MAT3(oPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:505:5: note: in expansion of macro 'MAT3'
  505 |     MAT3(oPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:504:5: note: in expansion of macro 'MAT3'
  504 |     MAT3(oPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:503:5: note: in expansion of macro 'MAT3'
  503 |     MAT3( oPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:502:5: note: in expansion of macro 'MAT3'
  502 |     MAT3( oPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:501:5: note: in expansion of macro 'MAT3'
  501 |     MAT3( oPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:500:5: note: in expansion of macro 'MAT3'
  500 |     MAT3( oPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:499:5: note: in expansion of macro 'MAT3'
  499 |     MAT3( oPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:497:5: note: in expansion of macro 'MAT3'
  497 |     MAT3(XuSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:496:5: note: in expansion of macro 'MAT3'
  496 |     MAT3(XuSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:495:5: note: in expansion of macro 'MAT3'
  495 |     MAT3(XuNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:494:5: note: in expansion of macro 'MAT3'
  494 |     MAT3(XuNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:493:5: note: in expansion of macro 'MAT3'
  493 |     MAT3( XuS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:492:5: note: in expansion of macro 'MAT3'
  492 |     MAT3( XuN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:491:5: note: in expansion of macro 'MAT3'
  491 |     MAT3( XuW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:490:5: note: in expansion of macro 'MAT3'
  490 |     MAT3( XuE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:489:5: note: in expansion of macro 'MAT3'
  489 |     MAT3( XuC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:487:5: note: in expansion of macro 'MAT3'
  487 |     MAT3(XoNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:486:5: note: in expansion of macro 'MAT3'
  486 |     MAT3(XoNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:485:5: note: in expansion of macro 'MAT3'
  485 |     MAT3( XoN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:484:5: note: in expansion of macro 'MAT3'
  484 |     MAT3( XoE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:483:5: note: in expansion of macro 'MAT3'
  483 |     MAT3( XoC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:481:5: note: in expansion of macro 'MAT3'
  481 |     MAT3(  uC, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:479:5: note: in expansion of macro 'MAT3'
  479 |     MAT3(  oN, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:478:5: note: in expansion of macro 'MAT3'
  478 |     MAT3(  oE, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:477:5: note: in expansion of macro 'MAT3'
  477 |     MAT3(  oC, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:468:21: warning: variable 'nzm1' set but not used [-Wunused-but-set-variable]
  468 |     int nxm1, nym1, nzm1;
      |                     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:468:15: warning: variable 'nym1' set but not used [-Wunused-but-set-variable]
  468 |     int nxm1, nym1, nzm1;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:468:9: warning: variable 'nxm1' set but not used [-Wunused-but-set-variable]
  468 |     int nxm1, nym1, nzm1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:467:9: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable]
  467 |     int kkm1, kkp1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:464:28: warning: variable 'kp2' set but not used [-Wunused-but-set-variable]
  464 |     int  km1,  kp1,  km2,  kp2;
      |                            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:464:22: warning: variable 'km2' set but not used [-Wunused-but-set-variable]
  464 |     int  km1,  kp1,  km2,  kp2;
      |                      ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:463:28: warning: variable 'jp2' set but not used [-Wunused-but-set-variable]
  463 |     int  jm1,  jp1,  jm2,  jp2;
      |                            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:462:28: warning: variable 'ip2' set but not used [-Wunused-but-set-variable]
  462 |     int  im1,  ip1,  im2,  ip2;
      |                            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c: In function 'BEMparm_ctor2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:79:9: warning: unused variable 'i' [-Wunused-variable]
   79 |     int i;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c: In function 'BEMparm_check':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:127:36: warning: unused variable 'nlev' [-Wunused-variable]
  127 |     int i, tdime[3], ti, tnlev[3], nlev;
      |                                    ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:127:26: warning: unused variable 'tnlev' [-Wunused-variable]
  127 |     int i, tdime[3], ti, tnlev[3], nlev;
      |                          ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:127:22: warning: unused variable 'ti' [-Wunused-variable]
  127 |     int i, tdime[3], ti, tnlev[3], nlev;
      |                      ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:127:12: warning: unused variable 'tdime' [-Wunused-variable]
  127 |     int i, tdime[3], ti, tnlev[3], nlev;
      |            ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:127:9: warning: unused variable 'i' [-Wunused-variable]
  127 |     int i, tdime[3], ti, tnlev[3], nlev;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c: In function 'BEMparm_copy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/bemparm.c:176:9: warning: unused variable 'i' [-Wunused-variable]
  176 |     int i;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'writematMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:1832:30: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 1832 |         sprintf(outpath, "%s.%s", writematstem, "mat");
      |                              ^~                 ~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/buildPd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c
In file included from /usr/include/string.h:495,
                 from /usr/include/maloc/maloc_base.h:82,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbeparm.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbeparm.c:57:
In function 'strncpy',
    inlined from 'PBEparm_parseWRITE' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbeparm.c:1157:9:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 22%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/cgd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/cgd.c
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c: In function 'VbuildG_27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1375:5: note: in expansion of macro 'MAT3'
 1375 |     MAT3(dPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1374:5: note: in expansion of macro 'MAT3'
 1374 |     MAT3(dPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1373:5: note: in expansion of macro 'MAT3'
 1373 |     MAT3(dPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1372:5: note: in expansion of macro 'MAT3'
 1372 |     MAT3(dPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1371:5: note: in expansion of macro 'MAT3'
 1371 |     MAT3( dPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1370:5: note: in expansion of macro 'MAT3'
 1370 |     MAT3( dPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1369:5: note: in expansion of macro 'MAT3'
 1369 |     MAT3( dPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1368:5: note: in expansion of macro 'MAT3'
 1368 |     MAT3( dPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1367:5: note: in expansion of macro 'MAT3'
 1367 |     MAT3( dPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1365:5: note: in expansion of macro 'MAT3'
 1365 |     MAT3(uPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1364:5: note: in expansion of macro 'MAT3'
 1364 |     MAT3(uPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1363:5: note: in expansion of macro 'MAT3'
 1363 |     MAT3(uPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1362:5: note: in expansion of macro 'MAT3'
 1362 |     MAT3(uPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1361:5: note: in expansion of macro 'MAT3'
 1361 |     MAT3( uPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1360:5: note: in expansion of macro 'MAT3'
 1360 |     MAT3( uPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1359:5: note: in expansion of macro 'MAT3'
 1359 |     MAT3( uPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1358:5: note: in expansion of macro 'MAT3'
 1358 |     MAT3( uPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1357:5: note: in expansion of macro 'MAT3'
 1357 |     MAT3( uPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1355:5: note: in expansion of macro 'MAT3'
 1355 |     MAT3(oPSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1354:5: note: in expansion of macro 'MAT3'
 1354 |     MAT3(oPSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1353:5: note: in expansion of macro 'MAT3'
 1353 |     MAT3(oPNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1352:5: note: in expansion of macro 'MAT3'
 1352 |     MAT3(oPNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1351:5: note: in expansion of macro 'MAT3'
 1351 |     MAT3( oPW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1350:5: note: in expansion of macro 'MAT3'
 1350 |     MAT3( oPE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1349:5: note: in expansion of macro 'MAT3'
 1349 |     MAT3( oPS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1348:5: note: in expansion of macro 'MAT3'
 1348 |     MAT3( oPN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1347:5: note: in expansion of macro 'MAT3'
 1347 |     MAT3( oPC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1345:5: note: in expansion of macro 'MAT3'
 1345 |     MAT3(XuSW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1344:5: note: in expansion of macro 'MAT3'
 1344 |     MAT3(XuSE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1343:5: note: in expansion of macro 'MAT3'
 1343 |     MAT3(XuNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1342:5: note: in expansion of macro 'MAT3'
 1342 |     MAT3(XuNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1341:5: note: in expansion of macro 'MAT3'
 1341 |     MAT3( XuS, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1340:5: note: in expansion of macro 'MAT3'
 1340 |     MAT3( XuN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1339:5: note: in expansion of macro 'MAT3'
 1339 |     MAT3( XuW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1338:5: note: in expansion of macro 'MAT3'
 1338 |     MAT3( XuE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XuC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1337:5: note: in expansion of macro 'MAT3'
 1337 |     MAT3( XuC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1335:5: note: in expansion of macro 'MAT3'
 1335 |     MAT3(XoNW, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1334:5: note: in expansion of macro 'MAT3'
 1334 |     MAT3(XoNE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1333:5: note: in expansion of macro 'MAT3'
 1333 |     MAT3( XoN, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1332:5: note: in expansion of macro 'MAT3'
 1332 |     MAT3( XoE, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_XoC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1331:5: note: in expansion of macro 'MAT3'
 1331 |     MAT3( XoC, *nx, *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1329:5: note: in expansion of macro 'MAT3'
 1329 |     MAT3( uSW, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1328:5: note: in expansion of macro 'MAT3'
 1328 |     MAT3( uSE, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1327:5: note: in expansion of macro 'MAT3'
 1327 |     MAT3( uNW, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1326:5: note: in expansion of macro 'MAT3'
 1326 |     MAT3( uNE, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1325:5: note: in expansion of macro 'MAT3'
 1325 |     MAT3(  uS, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1324:5: note: in expansion of macro 'MAT3'
 1324 |     MAT3(  uN, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1323:5: note: in expansion of macro 'MAT3'
 1323 |     MAT3(  uW, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1322:5: note: in expansion of macro 'MAT3'
 1322 |     MAT3(  uE, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1321:5: note: in expansion of macro 'MAT3'
 1321 |     MAT3(  uC, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1319:5: note: in expansion of macro 'MAT3'
 1319 |     MAT3( oNW, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1318:5: note: in expansion of macro 'MAT3'
 1318 |     MAT3( oNE, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1317:5: note: in expansion of macro 'MAT3'
 1317 |     MAT3(  oN, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1316:5: note: in expansion of macro 'MAT3'
 1316 |     MAT3(  oE, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1315:5: note: in expansion of macro 'MAT3'
 1315 |     MAT3(  oC, *nxf, *nyf,  *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1272:21: warning: variable 'nzm1' set but not used [-Wunused-but-set-variable]
 1272 |     int nxm1, nym1, nzm1;
      |                     ^~~~
In file included from /usr/include/string.h:495,
                 from /usr/include/maloc/maloc_base.h:82,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:57:
In function 'strncpy',
    inlined from 'NOsh_parseAPOLAR' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:1341:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:582:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseELEC' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:1222:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:577:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1272:15: warning: variable 'nym1' set but not used [-Wunused-but-set-variable]
 1272 |     int nxm1, nym1, nzm1;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1272:9: warning: variable 'nxm1' set but not used [-Wunused-but-set-variable]
 1272 |     int nxm1, nym1, nzm1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'writedataFlat':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1271:9: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable]
 1271 |     int kkm1, kkp1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2097:33: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2097 |             ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na *
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1268:28: warning: variable 'kp2' set but not used [-Wunused-but-set-variable]
 1268 |     int  km1,  kp1,  km2,  kp2;
      |                            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildGd.c:1268:22: warning: variable 'km2' set but not used [-Wunused-but-set-variable]
 1268 |     int  km1,  kp1,  km2,  kp2;
      |                      ^~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_MESH' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:953:9,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:1007:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_CHARGE' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:918:5,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:1005:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_POTENTIAL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:872:5,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:1003:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_KAPPA' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:827:5,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:1001:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_DIEL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:772:5,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:999:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_DIEL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:776:5,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:999:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_DIEL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:780:5,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:999:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 23%] Building C object src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/geoflowparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.c
In function 'strncpy',
    inlined from 'NOsh_parseREAD_PARM' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:723:13,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:997:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_PARM' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:701:13,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:997:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_MOL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:659:9,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:995:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'PBEparm_parseWRITEMAT' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/pbeparm.c:1198:5:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_MOL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:640:9,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:995:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'NOsh_parseREAD_MOL' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:621:9,
    inlined from 'NOsh_parseREAD' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:995:13,
    inlined from 'NOsh_parseInput.part.0' at /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/nosh.c:567:18:
/usr/include/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 1024 bytes from a string of length 8191 [-Wstringop-truncation]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildP':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:62:5: note: in expansion of macro 'MAT2'
   62 |     MAT2(ac, *nxf * *nyf * *nzf, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:61:5: note: in expansion of macro 'MAT2'
   61 |     MAT2(pc, *nxc * *nyc * *nzc, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildP_trilin':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:96:5: note: in expansion of macro 'MAT2'
   96 |     MAT2(pc, *nxc * *nyc * *nzc, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/cgd.c: In function 'Vcghs':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/cgd.c:94:24: warning: 'rhok1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   94 |           beta = rhok2 / rhok1;
      |                  ~~~~~~^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildPb_trilin':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:158:5: note: in expansion of macro 'MAT3'
  158 |     MAT3(dPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:157:5: note: in expansion of macro 'MAT3'
  157 |     MAT3(dPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:156:5: note: in expansion of macro 'MAT3'
  156 |     MAT3(dPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:155:5: note: in expansion of macro 'MAT3'
  155 |     MAT3(dPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:153:5: note: in expansion of macro 'MAT3'
  153 |     MAT3( dPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:152:5: note: in expansion of macro 'MAT3'
  152 |     MAT3( dPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:151:5: note: in expansion of macro 'MAT3'
  151 |     MAT3( dPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:150:5: note: in expansion of macro 'MAT3'
  150 |     MAT3( dPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:149:5: note: in expansion of macro 'MAT3'
  149 |     MAT3( dPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:147:5: note: in expansion of macro 'MAT3'
  147 |     MAT3(uPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:146:5: note: in expansion of macro 'MAT3'
  146 |     MAT3(uPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:145:5: note: in expansion of macro 'MAT3'
  145 |     MAT3(uPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:144:5: note: in expansion of macro 'MAT3'
  144 |     MAT3(uPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:142:5: note: in expansion of macro 'MAT3'
  142 |     MAT3( uPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:141:5: note: in expansion of macro 'MAT3'
  141 |     MAT3( uPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:140:5: note: in expansion of macro 'MAT3'
  140 |     MAT3( uPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:139:5: note: in expansion of macro 'MAT3'
  139 |     MAT3( uPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:138:5: note: in expansion of macro 'MAT3'
  138 |     MAT3( uPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:136:5: note: in expansion of macro 'MAT3'
  136 |     MAT3(oPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:135:5: note: in expansion of macro 'MAT3'
  135 |     MAT3(oPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:134:5: note: in expansion of macro 'MAT3'
  134 |     MAT3(oPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:133:5: note: in expansion of macro 'MAT3'
  133 |     MAT3(oPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:131:5: note: in expansion of macro 'MAT3'
  131 |     MAT3( oPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:130:5: note: in expansion of macro 'MAT3'
  130 |     MAT3( oPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:129:5: note: in expansion of macro 'MAT3'
  129 |     MAT3( oPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:128:5: note: in expansion of macro 'MAT3'
  128 |     MAT3( oPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:127:5: note: in expansion of macro 'MAT3'
  127 |     MAT3( oPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildP_op7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:207:5: note: in expansion of macro 'MAT2'
  207 |     MAT2(pc, *nxc * *nyc * *nzc, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:206:5: note: in expansion of macro 'MAT2'
  206 |     MAT2(ac, *nxf * *nyf * *nzf, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'writedataXML':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2355:33: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2355 |             ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na *
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildPb_op7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:282:5: note: in expansion of macro 'MAT3'
  282 |     MAT3(dPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:281:5: note: in expansion of macro 'MAT3'
  281 |     MAT3(dPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:280:5: note: in expansion of macro 'MAT3'
  280 |     MAT3(dPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:279:5: note: in expansion of macro 'MAT3'
  279 |     MAT3(dPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:278:5: note: in expansion of macro 'MAT3'
  278 |     MAT3( dPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:277:5: note: in expansion of macro 'MAT3'
  277 |     MAT3( dPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:276:5: note: in expansion of macro 'MAT3'
  276 |     MAT3( dPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:275:5: note: in expansion of macro 'MAT3'
  275 |     MAT3( dPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:274:5: note: in expansion of macro 'MAT3'
  274 |     MAT3( dPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:273:5: note: in expansion of macro 'MAT3'
  273 |     MAT3(uPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:272:5: note: in expansion of macro 'MAT3'
  272 |     MAT3(uPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:271:5: note: in expansion of macro 'MAT3'
  271 |     MAT3(uPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:270:5: note: in expansion of macro 'MAT3'
  270 |     MAT3(uPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:269:5: note: in expansion of macro 'MAT3'
  269 |     MAT3( uPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:268:5: note: in expansion of macro 'MAT3'
  268 |     MAT3( uPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:267:5: note: in expansion of macro 'MAT3'
  267 |     MAT3( uPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:266:5: note: in expansion of macro 'MAT3'
  266 |     MAT3( uPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:265:5: note: in expansion of macro 'MAT3'
  265 |     MAT3( uPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:264:5: note: in expansion of macro 'MAT3'
  264 |     MAT3(oPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:263:5: note: in expansion of macro 'MAT3'
  263 |     MAT3(oPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:262:5: note: in expansion of macro 'MAT3'
  262 |     MAT3(oPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:261:5: note: in expansion of macro 'MAT3'
  261 |     MAT3(oPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:260:5: note: in expansion of macro 'MAT3'
  260 |     MAT3( oPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:259:5: note: in expansion of macro 'MAT3'
  259 |     MAT3( oPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:258:5: note: in expansion of macro 'MAT3'
  258 |     MAT3( oPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:257:5: note: in expansion of macro 'MAT3'
  257 |     MAT3( oPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:256:5: note: in expansion of macro 'MAT3'
  256 |     MAT3( oPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:255:5: note: in expansion of macro 'MAT3'
  255 |     MAT3(  uC, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:254:5: note: in expansion of macro 'MAT3'
  254 |     MAT3(  oN, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:253:5: note: in expansion of macro 'MAT3'
  253 |     MAT3(  oE, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:252:5: note: in expansion of macro 'MAT3'
  252 |     MAT3(  oC, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:250:32: warning: variable 'eighth' set but not used [-Wunused-but-set-variable]
  250 |     double won, half, quarter, eighth;
      |                                ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:250:23: warning: variable 'quarter' set but not used [-Wunused-but-set-variable]
  250 |     double won, half, quarter, eighth;
      |                       ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:250:17: warning: variable 'half' set but not used [-Wunused-but-set-variable]
  250 |     double won, half, quarter, eighth;
      |                 ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:248:15: warning: variable 'kkp1' set but not used [-Wunused-but-set-variable]
  248 |     int kkm1, kkp1;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:248:9: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable]
  248 |     int kkm1, kkp1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:247:15: warning: variable 'jjp1' set but not used [-Wunused-but-set-variable]
  247 |     int jjm1, jjp1;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:247:9: warning: variable 'jjm1' set but not used [-Wunused-but-set-variable]
  247 |     int jjm1, jjp1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:246:15: warning: variable 'iip1' set but not used [-Wunused-but-set-variable]
  246 |     int iim1, iip1;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:246:9: warning: variable 'iim1' set but not used [-Wunused-but-set-variable]
  246 |     int iim1, iip1;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:245:16: warning: variable 'kp2' set but not used [-Wunused-but-set-variable]
  245 |     int  km2,  kp2;
      |                ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:245:10: warning: variable 'km2' set but not used [-Wunused-but-set-variable]
  245 |     int  km2,  kp2;
      |          ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:243:16: warning: variable 'jp2' set but not used [-Wunused-but-set-variable]
  243 |     int  jm2,  jp2;
      |                ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:243:10: warning: variable 'jm2' set but not used [-Wunused-but-set-variable]
  243 |     int  jm2,  jp2;
      |          ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:241:16: warning: variable 'ip2' set but not used [-Wunused-but-set-variable]
  241 |     int  im2,  ip2;
      |                ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:241:10: warning: variable 'im2' set but not used [-Wunused-but-set-variable]
  241 |     int  im2,  ip2;
      |          ^~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildP_op27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:723:5: note: in expansion of macro 'MAT2'
  723 |     MAT2(pc, *nxc * *nyc * *nzc, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:722:5: note: in expansion of macro 'MAT2'
  722 |     MAT2(ac, *nxf * *nyf * *nzf, 1);
      |     ^~~~
[ 25%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/gsd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.c: In function 'GEOFLOWparm_ctor2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/geoflowparm.c:79:9: warning: unused variable 'i' [-Wunused-variable]
   79 |     int i;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c: In function 'VbuildPb_op27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:813:7: note: in expansion of macro 'MAT3'
  813 |       MAT3(dPSW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:812:7: note: in expansion of macro 'MAT3'
  812 |       MAT3(dPSE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:811:7: note: in expansion of macro 'MAT3'
  811 |       MAT3(dPNW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:810:7: note: in expansion of macro 'MAT3'
  810 |       MAT3(dPNE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:809:7: note: in expansion of macro 'MAT3'
  809 |       MAT3( dPW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:808:7: note: in expansion of macro 'MAT3'
  808 |       MAT3( dPE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:807:7: note: in expansion of macro 'MAT3'
  807 |       MAT3( dPS, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:806:7: note: in expansion of macro 'MAT3'
  806 |       MAT3( dPN, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:805:7: note: in expansion of macro 'MAT3'
  805 |       MAT3( dPC, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:804:7: note: in expansion of macro 'MAT3'
  804 |       MAT3(uPSW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:803:7: note: in expansion of macro 'MAT3'
  803 |       MAT3(uPSE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:802:7: note: in expansion of macro 'MAT3'
  802 |       MAT3(uPNW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:801:7: note: in expansion of macro 'MAT3'
  801 |       MAT3(uPNE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:800:7: note: in expansion of macro 'MAT3'
  800 |       MAT3( uPW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:799:7: note: in expansion of macro 'MAT3'
  799 |       MAT3( uPE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:798:7: note: in expansion of macro 'MAT3'
  798 |       MAT3( uPS, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:797:7: note: in expansion of macro 'MAT3'
  797 |       MAT3( uPN, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:796:7: note: in expansion of macro 'MAT3'
  796 |       MAT3( uPC, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:795:7: note: in expansion of macro 'MAT3'
  795 |       MAT3(oPSW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:794:7: note: in expansion of macro 'MAT3'
  794 |       MAT3(oPSE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:793:7: note: in expansion of macro 'MAT3'
  793 |       MAT3(oPNW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:792:7: note: in expansion of macro 'MAT3'
  792 |       MAT3(oPNE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:791:7: note: in expansion of macro 'MAT3'
  791 |       MAT3( oPW, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:790:7: note: in expansion of macro 'MAT3'
  790 |       MAT3( oPE, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:789:7: note: in expansion of macro 'MAT3'
  789 |       MAT3( oPS, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:788:7: note: in expansion of macro 'MAT3'
  788 |       MAT3( oPN, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:787:7: note: in expansion of macro 'MAT3'
  787 |       MAT3( oPC, *nxc, *nyc, *nzc);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:786:7: note: in expansion of macro 'MAT3'
  786 |       MAT3( uSW, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:785:7: note: in expansion of macro 'MAT3'
  785 |       MAT3( uSE, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:784:7: note: in expansion of macro 'MAT3'
  784 |       MAT3( uNW, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:783:7: note: in expansion of macro 'MAT3'
  783 |       MAT3( uNE, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:782:7: note: in expansion of macro 'MAT3'
  782 |       MAT3(  uS, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:781:7: note: in expansion of macro 'MAT3'
  781 |       MAT3(  uN, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:780:7: note: in expansion of macro 'MAT3'
  780 |       MAT3(  uW, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:779:7: note: in expansion of macro 'MAT3'
  779 |       MAT3(  uE, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:778:7: note: in expansion of macro 'MAT3'
  778 |       MAT3( oNW, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:777:7: note: in expansion of macro 'MAT3'
  777 |       MAT3( oNE, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:776:7: note: in expansion of macro 'MAT3'
  776 |       MAT3(  uC, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:775:7: note: in expansion of macro 'MAT3'
  775 |       MAT3(  oN, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:774:7: note: in expansion of macro 'MAT3'
  774 |       MAT3(  oE, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:773:7: note: in expansion of macro 'MAT3'
  773 |       MAT3(  oC, *nxf, *nyf, *nzf);
      |       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:771:34: warning: variable 'eighth' set but not used [-Wunused-but-set-variable]
  771 |       double won, half, quarter, eighth;
      |                                  ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:771:25: warning: variable 'quarter' set but not used [-Wunused-but-set-variable]
  771 |       double won, half, quarter, eighth;
      |                         ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:771:19: warning: variable 'half' set but not used [-Wunused-but-set-variable]
  771 |       double won, half, quarter, eighth;
      |                   ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:769:17: warning: variable 'kkp1' set but not used [-Wunused-but-set-variable]
  769 |       int kkm1, kkp1;
      |                 ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:769:11: warning: variable 'kkm1' set but not used [-Wunused-but-set-variable]
  769 |       int kkm1, kkp1;
      |           ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:768:17: warning: variable 'jjp1' set but not used [-Wunused-but-set-variable]
  768 |       int jjm1, jjp1;
      |                 ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:768:11: warning: variable 'jjm1' set but not used [-Wunused-but-set-variable]
  768 |       int jjm1, jjp1;
      |           ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:767:17: warning: variable 'iip1' set but not used [-Wunused-but-set-variable]
  767 |       int iim1, iip1;
      |                 ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:767:11: warning: variable 'iim1' set but not used [-Wunused-but-set-variable]
  767 |       int iim1, iip1;
      |           ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:766:18: warning: variable 'kp2' set but not used [-Wunused-but-set-variable]
  766 |       int  km2,  kp2;
      |                  ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:766:12: warning: variable 'km2' set but not used [-Wunused-but-set-variable]
  766 |       int  km2,  kp2;
      |            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:764:18: warning: variable 'jp2' set but not used [-Wunused-but-set-variable]
  764 |       int  jm2,  jp2;
      |                  ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:764:12: warning: variable 'jm2' set but not used [-Wunused-but-set-variable]
  764 |       int  jm2,  jp2;
      |            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:762:18: warning: variable 'ip2' set but not used [-Wunused-but-set-variable]
  762 |       int  im2,  ip2;
      |                  ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/buildPd.c:762:12: warning: variable 'im2' set but not used [-Wunused-but-set-variable]
  762 |       int  im2,  ip2;
      |            ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'writedataMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2668:30: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2668 |         sprintf(outpath, "%s.%s", writestem, "dxbin");
      |                              ^~              ~~~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 7 and 1030 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2712:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2712 |                 sprintf(outpath, "%s.%s", writestem, "txt");
      |                                      ^~              ~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2703:38: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2703 |                 sprintf(outpath, "%s.%s", writestem, "dx.gz");
      |                                      ^~              ~~~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 7 and 1030 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2686:38: warning: '%s' directive writing 4 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2686 |                 sprintf(outpath, "%s.%s", writestem, "mcsf");
      |                                      ^~              ~~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 6 and 1029 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2679:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2679 |                 sprintf(outpath, "%s.%s", writestem, "ucd");
      |                                      ^~              ~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2693:38: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2693 |                 sprintf(outpath, "%s.%s", writestem, "grd");
      |                                      ^~              ~~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 5 and 1028 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2658:38: warning: '%s' directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
 2658 |                 sprintf(outpath, "%s.%s", writestem, "dx");
      |                                      ^~              ~~~~
In file included from /usr/include/stdio.h:871,
                 from /usr/include/maloc/maloc_base.h:80,
                 from /usr/include/maloc/maloc.h:38,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/apbs.h:67,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.h:64,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:54:
/usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 4 and 1027 bytes into a destination of size 1024
   36 |   return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   37 |       __bos (__s), __fmt, __va_arg_pack ());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 26%] Building C object src/generic/CMakeFiles/apbs_generic.dir/apolparm.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/apolparm.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/apolparm.c
[ 27%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/matvecd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c: In function 'Vgsrb':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:62:5: note: in expansion of macro 'MAT2'
   62 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c: In function 'Vgsrb7x':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:116: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  116 |         #pragma omp parallel for private(i, j, k, ioff)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:136: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  136 |         #pragma omp parallel for private(i, j, k, ioff)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:111:5: note: in expansion of macro 'MAT3'
  111 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:110:5: note: in expansion of macro 'MAT3'
  110 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:109:5: note: in expansion of macro 'MAT3'
  109 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:108:5: note: in expansion of macro 'MAT3'
  108 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:106:5: note: in expansion of macro 'MAT3'
  106 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_r' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:106:5: note: in expansion of macro 'MAT3'
  106 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_r' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:106:5: note: in expansion of macro 'MAT3'
  106 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w2' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:105:5: note: in expansion of macro 'MAT3'
  105 |     MAT3(w2, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w2' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:105:5: note: in expansion of macro 'MAT3'
  105 |     MAT3(w2, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w2' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:105:5: note: in expansion of macro 'MAT3'
  105 |     MAT3(w2, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:104:5: note: in expansion of macro 'MAT3'
  104 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w1' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:104:5: note: in expansion of macro 'MAT3'
  104 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w1' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:104:5: note: in expansion of macro 'MAT3'
  104 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:103:5: note: in expansion of macro 'MAT3'
  103 |     MAT3( x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:102:5: note: in expansion of macro 'MAT3'
  102 |     MAT3(fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:101:5: note: in expansion of macro 'MAT3'
  101 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c: In function 'Vgsrb27x':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:203:5: note: in expansion of macro 'MAT3'
  203 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:202:5: note: in expansion of macro 'MAT3'
  202 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:201:5: note: in expansion of macro 'MAT3'
  201 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:200:5: note: in expansion of macro 'MAT3'
  200 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:199:5: note: in expansion of macro 'MAT3'
  199 |     MAT3( uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:198:5: note: in expansion of macro 'MAT3'
  198 |     MAT3( uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:197:5: note: in expansion of macro 'MAT3'
  197 |     MAT3( uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:196:5: note: in expansion of macro 'MAT3'
  196 |     MAT3( uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:194:5: note: in expansion of macro 'MAT3'
  194 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:193:5: note: in expansion of macro 'MAT3'
  193 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:191:5: note: in expansion of macro 'MAT3'
  191 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:190:5: note: in expansion of macro 'MAT3'
  190 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:189:5: note: in expansion of macro 'MAT3'
  189 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:188:5: note: in expansion of macro 'MAT3'
  188 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:186:5: note: in expansion of macro 'MAT3'
  186 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_r' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:186:5: note: in expansion of macro 'MAT3'
  186 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_r' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:186:5: note: in expansion of macro 'MAT3'
  186 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w2' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:185:5: note: in expansion of macro 'MAT3'
  185 |     MAT3(w2, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w2' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:185:5: note: in expansion of macro 'MAT3'
  185 |     MAT3(w2, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w2' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:185:5: note: in expansion of macro 'MAT3'
  185 |     MAT3(w2, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:184:5: note: in expansion of macro 'MAT3'
  184 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_w1' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:184:5: note: in expansion of macro 'MAT3'
  184 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_w1' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:184:5: note: in expansion of macro 'MAT3'
  184 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:183:5: note: in expansion of macro 'MAT3'
  183 |     MAT3( x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:182:5: note: in expansion of macro 'MAT3'
  182 |     MAT3(fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:181:5: note: in expansion of macro 'MAT3'
  181 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:177:9: warning: variable 'istep' set but not used [-Wunused-but-set-variable]
  177 |     int istep;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:175:17: warning: variable 'k2' set but not used [-Wunused-but-set-variable]
  175 |     int i2, j2, k2;
      |                 ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:175:13: warning: variable 'j2' set but not used [-Wunused-but-set-variable]
  175 |     int i2, j2, k2;
      |             ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:175:9: warning: variable 'i2' set but not used [-Wunused-but-set-variable]
  175 |     int i2, j2, k2;
      |         ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:174:17: warning: variable 'k1' set but not used [-Wunused-but-set-variable]
  174 |     int i1, j1, k1;
      |                 ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:174:13: warning: variable 'j1' set but not used [-Wunused-but-set-variable]
  174 |     int i1, j1, k1;
      |             ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/gsd.c:174:9: warning: variable 'i1' set but not used [-Wunused-but-set-variable]
  174 |     int i1, j1, k1;
      |         ^~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmatvec7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:82:5: note: in expansion of macro 'MAT2'
   82 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmatvec7_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:110: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  110 |     #pragma omp parallel for private(i, j, k)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:107:5: note: in expansion of macro 'MAT3'
  107 |     MAT3(y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:106:5: note: in expansion of macro 'MAT3'
  106 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:105:5: note: in expansion of macro 'MAT3'
  105 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:104:5: note: in expansion of macro 'MAT3'
  104 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:103:5: note: in expansion of macro 'MAT3'
  103 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:102:5: note: in expansion of macro 'MAT3'
  102 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:101:5: note: in expansion of macro 'MAT3'
  101 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmatvec27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:134:5: note: in expansion of macro 'MAT2'
  134 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmatvec27_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:182: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  182 |     #pragma omp parallel for private(i, j, k, tmpO, tmpU, tmpD)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:179:5: note: in expansion of macro 'MAT3'
  179 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:178:5: note: in expansion of macro 'MAT3'
  178 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:177:5: note: in expansion of macro 'MAT3'
  177 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:176:5: note: in expansion of macro 'MAT3'
  176 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:175:5: note: in expansion of macro 'MAT3'
  175 |     MAT3(uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:174:5: note: in expansion of macro 'MAT3'
  174 |     MAT3(uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:173:5: note: in expansion of macro 'MAT3'
  173 |     MAT3(uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:172:5: note: in expansion of macro 'MAT3'
  172 |     MAT3(uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:171:5: note: in expansion of macro 'MAT3'
  171 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:169:5: note: in expansion of macro 'MAT3'
  169 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:168:5: note: in expansion of macro 'MAT3'
  168 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:167:5: note: in expansion of macro 'MAT3'
  167 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:166:5: note: in expansion of macro 'MAT3'
  166 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:165:5: note: in expansion of macro 'MAT3'
  165 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:163:5: note: in expansion of macro 'MAT3'
  163 |     MAT3(y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:162:5: note: in expansion of macro 'MAT3'
  162 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:161:5: note: in expansion of macro 'MAT3'
  161 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmatvec7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:258:5: note: in expansion of macro 'MAT2'
  258 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmatvecd7_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:296: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  296 |     #pragma omp parallel for private(i, j, k)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'returnEnergy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2770:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2770 |         ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na *
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:287:5: note: in expansion of macro 'MAT3'
  287 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:286:5: note: in expansion of macro 'MAT3'
  286 |     MAT3( y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:285:5: note: in expansion of macro 'MAT3'
  285 |     MAT3( x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:284:5: note: in expansion of macro 'MAT3'
  284 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:283:5: note: in expansion of macro 'MAT3'
  283 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:283:5: note: in expansion of macro 'MAT3'
  283 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:283:5: note: in expansion of macro 'MAT3'
  283 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:282:5: note: in expansion of macro 'MAT3'
  282 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:281:5: note: in expansion of macro 'MAT3'
  281 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:280:5: note: in expansion of macro 'MAT3'
  280 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmatvec27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:317:5: note: in expansion of macro 'MAT2'
  317 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmatvecd27_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:374: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  374 |     #pragma omp parallel for private(i, j, k, tmpO, tmpU, tmpD)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:365:5: note: in expansion of macro 'MAT3'
  365 |     MAT3( w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:364:5: note: in expansion of macro 'MAT3'
  364 |     MAT3(  y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:363:5: note: in expansion of macro 'MAT3'
  363 |     MAT3(  x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:362:5: note: in expansion of macro 'MAT3'
  362 |     MAT3( oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:361:5: note: in expansion of macro 'MAT3'
  361 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:361:5: note: in expansion of macro 'MAT3'
  361 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:361:5: note: in expansion of macro 'MAT3'
  361 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:360:5: note: in expansion of macro 'MAT3'
  360 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:359:5: note: in expansion of macro 'MAT3'
  359 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:358:5: note: in expansion of macro 'MAT3'
  358 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:357:5: note: in expansion of macro 'MAT3'
  357 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:356:5: note: in expansion of macro 'MAT3'
  356 |     MAT3( uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:355:5: note: in expansion of macro 'MAT3'
  355 |     MAT3( uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:354:5: note: in expansion of macro 'MAT3'
  354 |     MAT3( uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:353:5: note: in expansion of macro 'MAT3'
  353 |     MAT3( uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:352:5: note: in expansion of macro 'MAT3'
  352 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:351:5: note: in expansion of macro 'MAT3'
  351 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:350:5: note: in expansion of macro 'MAT3'
  350 |     MAT3( uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:349:5: note: in expansion of macro 'MAT3'
  349 |     MAT3( oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:348:5: note: in expansion of macro 'MAT3'
  348 |     MAT3( oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmresid7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:446:5: note: in expansion of macro 'MAT2'
  446 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmresid7_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:474: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  474 |     #pragma omp parallel for private(i, j, k)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:471:5: note: in expansion of macro 'MAT3'
  471 |     MAT3(r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:470:5: note: in expansion of macro 'MAT3'
  470 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:469:5: note: in expansion of macro 'MAT3'
  469 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:468:5: note: in expansion of macro 'MAT3'
  468 |     MAT3(fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:467:5: note: in expansion of macro 'MAT3'
  467 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:466:5: note: in expansion of macro 'MAT3'
  466 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:465:5: note: in expansion of macro 'MAT3'
  465 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:464:5: note: in expansion of macro 'MAT3'
  464 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmresid27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:498:5: note: in expansion of macro 'MAT2'
  498 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vmresid27_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:547: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  547 |     #pragma omp parallel for private(i, j, k, tmpO, tmpU, tmpD)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:545:5: note: in expansion of macro 'MAT3'
  545 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:544:5: note: in expansion of macro 'MAT3'
  544 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:543:5: note: in expansion of macro 'MAT3'
  543 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:542:5: note: in expansion of macro 'MAT3'
  542 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:541:5: note: in expansion of macro 'MAT3'
  541 |     MAT3(uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:540:5: note: in expansion of macro 'MAT3'
  540 |     MAT3(uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:539:5: note: in expansion of macro 'MAT3'
  539 |     MAT3(uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:538:5: note: in expansion of macro 'MAT3'
  538 |     MAT3(uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:537:5: note: in expansion of macro 'MAT3'
  537 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:535:5: note: in expansion of macro 'MAT3'
  535 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:534:5: note: in expansion of macro 'MAT3'
  534 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:533:5: note: in expansion of macro 'MAT3'
  533 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:532:5: note: in expansion of macro 'MAT3'
  532 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:531:5: note: in expansion of macro 'MAT3'
  531 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:529:5: note: in expansion of macro 'MAT3'
  529 |     MAT3(r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:528:5: note: in expansion of macro 'MAT3'
  528 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:527:5: note: in expansion of macro 'MAT3'
  527 |     MAT3(fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:526:5: note: in expansion of macro 'MAT3'
  526 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmresid7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:618:5: note: in expansion of macro 'MAT2'
  618 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'printEnergy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2831:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2831 |         ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na *
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmresid7_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:645:5: note: in expansion of macro 'MAT3'
  645 |     MAT3(w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:644:5: note: in expansion of macro 'MAT3'
  644 |     MAT3( r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:643:5: note: in expansion of macro 'MAT3'
  643 |     MAT3( x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:642:5: note: in expansion of macro 'MAT3'
  642 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:641:5: note: in expansion of macro 'MAT3'
  641 |     MAT3(fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:640:5: note: in expansion of macro 'MAT3'
  640 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:640:5: note: in expansion of macro 'MAT3'
  640 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:640:5: note: in expansion of macro 'MAT3'
  640 |     MAT3(cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:639:5: note: in expansion of macro 'MAT3'
  639 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:638:5: note: in expansion of macro 'MAT3'
  638 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:637:5: note: in expansion of macro 'MAT3'
  637 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmresid27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:676:5: note: in expansion of macro 'MAT2'
  676 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vnmresid27_1s':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_w1' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:722:5: note: in expansion of macro 'MAT3'
  722 |     MAT3( w1, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_r' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:721:5: note: in expansion of macro 'MAT3'
  721 |     MAT3(  r, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:720:5: note: in expansion of macro 'MAT3'
  720 |     MAT3(  x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:719:5: note: in expansion of macro 'MAT3'
  719 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:718:5: note: in expansion of macro 'MAT3'
  718 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:717:5: note: in expansion of macro 'MAT3'
  717 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:716:5: note: in expansion of macro 'MAT3'
  716 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:715:5: note: in expansion of macro 'MAT3'
  715 |     MAT3( uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:714:5: note: in expansion of macro 'MAT3'
  714 |     MAT3( uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:713:5: note: in expansion of macro 'MAT3'
  713 |     MAT3( uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:712:5: note: in expansion of macro 'MAT3'
  712 |     MAT3( uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:711:5: note: in expansion of macro 'MAT3'
  711 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:710:5: note: in expansion of macro 'MAT3'
  710 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:709:5: note: in expansion of macro 'MAT3'
  709 |     MAT3( uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:708:5: note: in expansion of macro 'MAT3'
  708 |     MAT3( oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:707:5: note: in expansion of macro 'MAT3'
  707 |     MAT3( oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:706:5: note: in expansion of macro 'MAT3'
  706 |     MAT3( fc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:705:5: note: in expansion of macro 'MAT3'
  705 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_cc' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:705:5: note: in expansion of macro 'MAT3'
  705 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_cc' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:705:5: note: in expansion of macro 'MAT3'
  705 |     MAT3( cc, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:704:5: note: in expansion of macro 'MAT3'
  704 |     MAT3( oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vrestrc':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:781:5: note: in expansion of macro 'MAT2'
  781 |     MAT2(pc, *nxc * *nyc * *nzc, 1 );
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vrestrc2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:855: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  855 |     #pragma omp parallel for private(k, kk, j, jj, i, ii, tmpO, tmpU, tmpD)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:847:5: note: in expansion of macro 'MAT3'
  847 |     MAT3(dPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:846:5: note: in expansion of macro 'MAT3'
  846 |     MAT3(dPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:845:5: note: in expansion of macro 'MAT3'
  845 |     MAT3(dPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:844:5: note: in expansion of macro 'MAT3'
  844 |     MAT3(dPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:842:5: note: in expansion of macro 'MAT3'
  842 |     MAT3(dPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:841:5: note: in expansion of macro 'MAT3'
  841 |     MAT3(dPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:840:5: note: in expansion of macro 'MAT3'
  840 |     MAT3(dPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:839:5: note: in expansion of macro 'MAT3'
  839 |     MAT3(dPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:838:5: note: in expansion of macro 'MAT3'
  838 |     MAT3(dPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:836:5: note: in expansion of macro 'MAT3'
  836 |     MAT3(uPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:835:5: note: in expansion of macro 'MAT3'
  835 |     MAT3(uPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:834:5: note: in expansion of macro 'MAT3'
  834 |     MAT3(uPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:833:5: note: in expansion of macro 'MAT3'
  833 |     MAT3(uPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:831:5: note: in expansion of macro 'MAT3'
  831 |     MAT3(uPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:830:5: note: in expansion of macro 'MAT3'
  830 |     MAT3(uPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:829:5: note: in expansion of macro 'MAT3'
  829 |     MAT3(uPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:828:5: note: in expansion of macro 'MAT3'
  828 |     MAT3(uPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:827:5: note: in expansion of macro 'MAT3'
  827 |     MAT3(uPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:825:5: note: in expansion of macro 'MAT3'
  825 |     MAT3(oPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:824:5: note: in expansion of macro 'MAT3'
  824 |     MAT3(oPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:823:5: note: in expansion of macro 'MAT3'
  823 |     MAT3(oPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:822:5: note: in expansion of macro 'MAT3'
  822 |     MAT3(oPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:820:5: note: in expansion of macro 'MAT3'
  820 |     MAT3(oPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:819:5: note: in expansion of macro 'MAT3'
  819 |     MAT3(oPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:818:5: note: in expansion of macro 'MAT3'
  818 |     MAT3(oPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:817:5: note: in expansion of macro 'MAT3'
  817 |     MAT3(oPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:816:5: note: in expansion of macro 'MAT3'
  816 |     MAT3(oPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xout' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:814:5: note: in expansion of macro 'MAT3'
  814 |     MAT3(xout, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xin' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:813:5: note: in expansion of macro 'MAT3'
  813 |     MAT3(xin, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:811:12: warning: variable 'dimfac' set but not used [-Wunused-but-set-variable]
  811 |     double dimfac;
      |            ^~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.h:55,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'VinterpPMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_pc' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:915:5: note: in expansion of macro 'MAT2'
  915 |     MAT2(pc, *nxc * *nyc * *nzc, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'VinterpPMG2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:977:5: note: in expansion of macro 'MAT3'
  977 |     MAT3(dPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:976:5: note: in expansion of macro 'MAT3'
  976 |     MAT3(dPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:975:5: note: in expansion of macro 'MAT3'
  975 |     MAT3(dPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:974:5: note: in expansion of macro 'MAT3'
  974 |     MAT3(dPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:972:5: note: in expansion of macro 'MAT3'
  972 |     MAT3( dPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'printElecEnergy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:971:5: note: in expansion of macro 'MAT3'
  971 |     MAT3( dPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2896:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2896 |         ltenergy += (scalar * Vunit_kb * (1e-3) * Vunit_Na *
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:970:5: note: in expansion of macro 'MAT3'
  970 |     MAT3( dPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:969:5: note: in expansion of macro 'MAT3'
  969 |     MAT3( dPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_dPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:968:5: note: in expansion of macro 'MAT3'
  968 |     MAT3( dPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:966:5: note: in expansion of macro 'MAT3'
  966 |     MAT3(uPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:965:5: note: in expansion of macro 'MAT3'
  965 |     MAT3(uPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:964:5: note: in expansion of macro 'MAT3'
  964 |     MAT3(uPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:963:5: note: in expansion of macro 'MAT3'
  963 |     MAT3(uPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:961:5: note: in expansion of macro 'MAT3'
  961 |     MAT3( uPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:960:5: note: in expansion of macro 'MAT3'
  960 |     MAT3( uPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:959:5: note: in expansion of macro 'MAT3'
  959 |     MAT3( uPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:958:5: note: in expansion of macro 'MAT3'
  958 |     MAT3( uPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:957:5: note: in expansion of macro 'MAT3'
  957 |     MAT3( uPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:955:5: note: in expansion of macro 'MAT3'
  955 |     MAT3(oPSW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:954:5: note: in expansion of macro 'MAT3'
  954 |     MAT3(oPSE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:953:5: note: in expansion of macro 'MAT3'
  953 |     MAT3(oPNW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:952:5: note: in expansion of macro 'MAT3'
  952 |     MAT3(oPNE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:950:5: note: in expansion of macro 'MAT3'
  950 |     MAT3( oPW, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:949:5: note: in expansion of macro 'MAT3'
  949 |     MAT3( oPE, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:948:5: note: in expansion of macro 'MAT3'
  948 |     MAT3( oPS, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:947:5: note: in expansion of macro 'MAT3'
  947 |     MAT3( oPN, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oPC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:946:5: note: in expansion of macro 'MAT3'
  946 |     MAT3( oPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:78:9: warning: unused variable 'dy_oPC' [-Wunused-variable]
   78 |     int dy_##mat = dy;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:946:5: note: in expansion of macro 'MAT3'
  946 |     MAT3( oPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:77:9: warning: unused variable 'dx_oPC' [-Wunused-variable]
   77 |     int dx_##mat = dx;        \
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:946:5: note: in expansion of macro 'MAT3'
  946 |     MAT3( oPC, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xout' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:944:5: note: in expansion of macro 'MAT3'
  944 |     MAT3(xout, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xin' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:943:5: note: in expansion of macro 'MAT3'
  943 |     MAT3( xin, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c: In function 'Vextrac':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xout' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:1081:5: note: in expansion of macro 'MAT3'
 1081 |     MAT3(xout, *nxc, *nyc, *nzc);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_xin' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/matvecd.c:1080:5: note: in expansion of macro 'MAT3'
 1080 |     MAT3( xin, *nxf, *nyf, *nzf);
      |     ^~~~
[ 28%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vacc.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'printApolEnergy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:2962:18: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2962 |         gtenergy += (scalar * ((apolparm->gamma*apolparm->sasa) +
      |         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 2963 |                                (apolparm->press*apolparm->sav) +
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 2964 |                                (apolparm->wcaEnergy)));
      |                                ~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'VaccSurf_dtor':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:841:11: warning: variable 'mem' set but not used [-Wunused-but-set-variable]
  841 |     Vmem *mem;
      |           ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'Vacc_splineAccGradAtomNorm3':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1104:27: warning: variable 'e5' set but not used [-Wunused-but-set-variable]
 1104 |     double e, e2, e3, e4, e5;
      |                           ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'Vacc_atomdSASA':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1338:12: warning: variable 'ts' set but not used [-Wunused-but-set-variable]
 1338 |     time_t ts;
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1335:15: warning: variable 'ref' set but not used [-Wunused-but-set-variable]
 1335 |     VaccSurf *ref;
      |               ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'Vacc_totalAtomdSASA':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1395:15: warning: variable 'ref' set but not used [-Wunused-but-set-variable]
 1395 |     VaccSurf *ref;
      |               ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1392:23: warning: variable 'tRad' set but not used [-Wunused-but-set-variable]
 1392 |     double *temp_Pos, tRad;
      |                       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1391:9: warning: variable 'iatom' set but not used [-Wunused-but-set-variable]
 1391 |     int iatom;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'Vacc_totalAtomdSAV':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1454:15: warning: variable 'ref' set but not used [-Wunused-but-set-variable]
 1454 |     VaccSurf *ref;
      |               ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1451:23: warning: variable 'tRad' set but not used [-Wunused-but-set-variable]
 1451 |     double *temp_Pos, tRad;
      |                       ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1450:9: warning: variable 'iatom' set but not used [-Wunused-but-set-variable]
 1450 |     int iatom;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'Vacc_wcaEnergyAtom':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1584:9: warning: variable 'npts' set but not used [-Wunused-but-set-variable]
 1584 |     int npts[3];
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c: In function 'Vacc_wcaForceAtom':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1807:12: warning: variable 'ts' set but not used [-Wunused-but-set-variable]
 1807 |     time_t ts;
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vacc.c:1764:9: warning: variable 'npts' set but not used [-Wunused-but-set-variable]
 1764 |         npts[3],
      |         ^~~~
[ 30%] Building C object src/generic/CMakeFiles/apbs_generic.dir/valist.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/valist.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c: In function 'Valist_readPQR':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c:618:10: warning: unused variable 'chs' [-Wunused-variable]
  618 |     char chs[VMAX_BUFSIZE];
      |          ^~~
[ 31%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.c
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.c: In function 'Vmvcs':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.c:94:5: note: in expansion of macro 'MAT2'
   94 |     MAT2(iz, 50, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c: In function 'initAPOL':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4539:30: warning: 'center[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4539 |         disp[0] = (x - center[0]);
      |                        ~~~~~~^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4540:30: warning: 'center[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4540 |         disp[1] = (y - center[1]);
      |                        ~~~~~~^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/routines.c:4541:30: warning: 'center[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4541 |         disp[2] = (z - center[2]);
      |                        ~~~~~~^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c: In function 'Valist_readXML':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c:834:17: warning: 'radius' may be used uninitialized in this function [-Wmaybe-uninitialized]
  834 |                 Vatom_setRadius(nextAtom, radius);
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c:833:17: warning: 'charge' may be used uninitialized in this function [-Wmaybe-uninitialized]
  833 |                 Vatom_setCharge(nextAtom, charge);
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c:831:48: warning: 'z' may be used uninitialized in this function [-Wmaybe-uninitialized]
  831 |                 pos[0] = x; pos[1] = y; pos[2] = z;
      |                                         ~~~~~~~^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c:831:36: warning: 'y' may be used uninitialized in this function [-Wmaybe-uninitialized]
  831 |                 pos[0] = x; pos[1] = y; pos[2] = z;
      |                             ~~~~~~~^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/valist.c:831:24: warning: 'x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  831 |                 pos[0] = x; pos[1] = y; pos[2] = z;
      |                 ~~~~~~~^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.c:298:13: warning: 'rsnrm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |             Vprtstp(*iok, *iters, rsnrm, rsden, orsnrm);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgcsd.c:557:37: warning: 'rsden' may be used uninitialized in this function [-Wmaybe-uninitialized]
  557 |     } while (*iters<*itmax && (rsnrm/rsden) > *errtol);
      |                               ~~~~~~^~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
[ 32%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vatom.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vatom.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vatom.c
[ 32%] Built target apbs_routines
[ 33%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c: In function 'Vmgdriv':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:80:9: warning: unused variable 'ierror' [-Wunused-variable]
   80 |     int ierror = 0;
      |         ^~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.h:62,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c: In function 'Vmgdriv2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:262:5: note: in expansion of macro 'MAT2'
  262 |     MAT2(iz, 50, nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:229:12: warning: unused variable 'tsolve' [-Wunused-variable]
  229 |     double tsolve  = 0.0;
      |            ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:228:12: warning: unused variable 'tsetupc' [-Wunused-variable]
  228 |     double tsetupc = 0.0;
      |            ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:227:12: warning: unused variable 'tsetupf' [-Wunused-variable]
  227 |     double tsetupf = 0.0;
      |            ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:226:12: warning: unused variable 'oh' [-Wunused-variable]
  226 |     double oh      = 0.0;
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:225:12: warning: unused variable 'bf' [-Wunused-variable]
  225 |     double bf      = 0.0;
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:221:12: warning: unused variable 'epsmac' [-Wunused-variable]
  221 |     double epsmac  = 0.0;
      |            ^~~~~~
[ 35%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vpbe.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vpbe.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vpbe.c
[ 36%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vcap.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vcap.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vcap.c
[ 37%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vclist.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vclist.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c: In function 'Vmgsz':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:650:26: warning: 'num_narrc_oper' may be used uninitialized in this function [-Wmaybe-uninitialized]
  650 |             + (num_narrc + num_narrc_oper) * *narrc
      |               ~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:651:13: warning: 'n_band' may be used uninitialized in this function [-Wmaybe-uninitialized]
  648 |     *iretot = num_narr * *narr
      |               ~~~~~~~~~~~~~~~~
  649 |             + (num_nf    + num_nf_oper) * *nf
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  650 |             + (num_narrc + num_narrc_oper) * *narrc
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  651 |             + n_band
      |             ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgdrvd.c:649:41: warning: 'num_nf_oper' may be used uninitialized in this function [-Wmaybe-uninitialized]
  649 |             + (num_nf    + num_nf_oper) * *nf
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
[ 38%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c
[ 40%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c
[ 41%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vstring.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vstring.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vstring.c
[ 42%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.c
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c: In function 'Vbuildops':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:78:5: note: in expansion of macro 'MAT2'
   78 |     MAT2(iz, 50, *nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c: In function 'Vbuildstr':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:261:5: note: in expansion of macro 'MAT2'
  261 |     MAT2(iz, 50, *nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxcopy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:61: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
   61 |     #pragma omp parallel for private(i,j,k)
      | 
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:55:5: note: in expansion of macro 'MAT3'
   55 |     MAT3(y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:54:5: note: in expansion of macro 'MAT3'
   54 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxcopy_small':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:73:5: note: in expansion of macro 'MAT3'
   73 |     MAT3(y, *nx - 2, *ny - 2, *nz - 2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:72:5: note: in expansion of macro 'MAT3'
   72 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxcopy_large':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:94:5: note: in expansion of macro 'MAT3'
   94 |     MAT3(y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:93:5: note: in expansion of macro 'MAT3'
   93 |     MAT3(x, *nx - 2, *ny - 2, *nz - 2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxaxpy':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:112:5: note: in expansion of macro 'MAT3'
  112 |     MAT3(y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:111:5: note: in expansion of macro 'MAT3'
  111 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxnrm1':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:131:5: note: in expansion of macro 'MAT3'
  131 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxnrm2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:152:5: note: in expansion of macro 'MAT3'
  152 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxdot':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_y' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:177:5: note: in expansion of macro 'MAT3'
  177 |     MAT3(y, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:176:5: note: in expansion of macro 'MAT3'
  176 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vazeros':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:197: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  197 |     #pragma omp parallel for private(i)
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:193:9: warning: unused variable 'nproc' [-Wunused-variable]
  193 |     int nproc = 1;
      |         ^~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'VfboundPMG':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:213:5: note: in expansion of macro 'MAT3'
  213 |     MAT3(gzc, *nx, *ny,   2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gyc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:212:5: note: in expansion of macro 'MAT3'
  212 |     MAT3(gyc, *nx, *nz,   2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:211:5: note: in expansion of macro 'MAT3'
  211 |     MAT3(gxc, *ny, *nz,   2);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:210:5: note: in expansion of macro 'MAT3'
  210 |     MAT3(  x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'VfboundPMG00':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:257:5: note: in expansion of macro 'MAT3'
  257 |     MAT3(  x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vaxrand':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:290:12: warning: variable 'xdum' set but not used [-Wunused-but-set-variable]
  290 |     double xdum;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:288:33: warning: variable 'iflag' set but not used [-Wunused-but-set-variable]
  288 |     int n, i, ii, ipara, ivect, iflag;
      |                                 ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:288:26: warning: variable 'ivect' set but not used [-Wunused-but-set-variable]
  288 |     int n, i, ii, ipara, ivect, iflag;
      |                          ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c: In function 'Vbuildcopy0':
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.h:58,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vxscal':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_x' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:317:5: note: in expansion of macro 'MAT3'
  317 |     MAT3(x, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:623:5: note: in expansion of macro 'MAT3'
  623 |     MAT3( fcf, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_ccf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:622:5: note: in expansion of macro 'MAT3'
  622 |     MAT3( ccf, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_tcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:621:5: note: in expansion of macro 'MAT3'
  621 |     MAT3( tcf, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a3cf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:620:5: note: in expansion of macro 'MAT3'
  620 |     MAT3(a3cf, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a2cf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:619:5: note: in expansion of macro 'MAT3'
  619 |     MAT3(a2cf, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a1cf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:618:5: note: in expansion of macro 'MAT3'
  618 |     MAT3(a1cf, *nxf, *nyf, *nzf);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:617:5: note: in expansion of macro 'MAT3'
  617 |     MAT3(gzcf, *nxf, *nyf,    4);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gycf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:616:5: note: in expansion of macro 'MAT3'
  616 |     MAT3(gycf, *nxf, *nzf,    4);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxcf' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:615:5: note: in expansion of macro 'MAT3'
  615 |     MAT3(gxcf, *nyf, *nzf,    4);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_tc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:614:5: note: in expansion of macro 'MAT3'
  614 |     MAT3(  tc,  *nx,  *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_fc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:613:5: note: in expansion of macro 'MAT3'
  613 |     MAT3(  fc,  *nx,  *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_cc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:612:5: note: in expansion of macro 'MAT3'
  612 |     MAT3(  cc,  *nx,  *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a3c' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:611:5: note: in expansion of macro 'MAT3'
  611 |     MAT3( a3c,  *nx,  *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a2c' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:610:5: note: in expansion of macro 'MAT3'
  610 |     MAT3( a2c,  *nx,  *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vprtmatd':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_a1c' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:609:5: note: in expansion of macro 'MAT3'
  609 |     MAT3( a1c,  *nx,  *ny,  *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_ac' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:332:5: note: in expansion of macro 'MAT2'
  332 |     MAT2(ac, *nx * *ny * *nz, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gzc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:608:5: note: in expansion of macro 'MAT3'
  608 |     MAT3( gzc,  *nx,  *ny,    4);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gyc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:607:5: note: in expansion of macro 'MAT3'
  607 |     MAT3( gyc,  *nx,  *nz,    4);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_gxc' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:606:5: note: in expansion of macro 'MAT3'
  606 |     MAT3( gxc,  *ny,  *nz,    4);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vprtmatd7':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:365:5: note: in expansion of macro 'MAT3'
  365 |     MAT3(uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:364:5: note: in expansion of macro 'MAT3'
  364 |     MAT3(oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:363:5: note: in expansion of macro 'MAT3'
  363 |     MAT3(oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:362:5: note: in expansion of macro 'MAT3'
  362 |     MAT3(oC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c: In function 'Vbuildalg':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgsubd.c:909:5: note: in expansion of macro 'MAT2'
  909 |     MAT2(iz, 50, *nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c: In function 'Vprtmatd27':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:410:5: note: in expansion of macro 'MAT3'
  410 |     MAT3(uSW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uSE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:409:5: note: in expansion of macro 'MAT3'
  409 |     MAT3(uSE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:408:5: note: in expansion of macro 'MAT3'
  408 |     MAT3(uNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:407:5: note: in expansion of macro 'MAT3'
  407 |     MAT3(uNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uS' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:406:5: note: in expansion of macro 'MAT3'
  406 |     MAT3( uS, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:405:5: note: in expansion of macro 'MAT3'
  405 |     MAT3( uN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:404:5: note: in expansion of macro 'MAT3'
  404 |     MAT3( uW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:403:5: note: in expansion of macro 'MAT3'
  403 |     MAT3( uE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNW' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:402:5: note: in expansion of macro 'MAT3'
  402 |     MAT3(oNW, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oNE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:401:5: note: in expansion of macro 'MAT3'
  401 |     MAT3(oNE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_uC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:400:5: note: in expansion of macro 'MAT3'
  400 |     MAT3( uC, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oN' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:399:5: note: in expansion of macro 'MAT3'
  399 |     MAT3( oN, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oE' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:398:5: note: in expansion of macro 'MAT3'
  398 |     MAT3( oE, *nx, *ny, *nz);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:79:9: warning: unused variable 'dz_oC' [-Wunused-variable]
   79 |     int dz_##mat = dz
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mikpckd.c:397:5: note: in expansion of macro 'MAT3'
  397 |     MAT3( oC, *nx, *ny, *nz);
      |     ^~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.c: In function 'Vdpbsl':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_abd' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.c:57:5: note: in expansion of macro 'MAT2'
   57 |     MAT2(abd, *lda, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.c: In function 'Vdpbfa':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_abd' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mlinpckd.c:194:5: note: in expansion of macro 'MAT2'
  194 |     MAT2(abd, *lda, 1);
      |     ^~~~
[ 43%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vparam.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vparam.c
[ 45%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_generic.dir/vgreen.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c
[ 46%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mypdec.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c
[ 47%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/newtond.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c: In function 'Vmypdefinitsmpbe':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:91:9: warning: unused variable 'i' [-Wunused-variable]
   91 |     int i;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c: In function 'Vc_vecpmg':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:161: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  161 |             #pragma omp parallel for \
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c: In function 'Vgreen_coulomb_direct':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c: In function 'Vc_vecsmpbe':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:229:31: warning: unused variable 'fz' [-Wunused-variable]
  229 |     double *q, qtemp, fx, fy, fz;
      |                               ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:218:26: warning: variable 'ivect' set but not used [-Wunused-but-set-variable]
  218 |     int n, i, ii, ipara, ivect;
      |                          ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:229:27: warning: unused variable 'fy' [-Wunused-variable]
  229 |     double *q, qtemp, fx, fy, fz;
      |                           ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:218:19: warning: variable 'ipara' set but not used [-Wunused-but-set-variable]
  218 |     int n, i, ii, ipara, ivect;
      |                   ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:218:15: warning: unused variable 'ii' [-Wunused-variable]
  218 |     int n, i, ii, ipara, ivect;
      |               ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:229:23: warning: unused variable 'fx' [-Wunused-variable]
  229 |     double *q, qtemp, fx, fy, fz;
      |                       ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:217:9: warning: unused variable 'iion' [-Wunused-variable]
  217 |     int iion;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:229:16: warning: unused variable 'qtemp' [-Wunused-variable]
  229 |     double *q, qtemp, fx, fy, fz;
      |                ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:214:28: warning: unused variable 'fact' [-Wunused-variable]
  214 |     double argument, poly, fact;
      |                            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:214:22: warning: unused variable 'poly' [-Wunused-variable]
  214 |     double argument, poly, fact;
      |                      ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:214:12: warning: unused variable 'argument' [-Wunused-variable]
  214 |     double argument, poly, fact;
      |            ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:213:29: warning: unused variable 'am_pos' [-Wunused-variable]
  213 |     double am_zero, am_neg, am_pos;
      |                             ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:213:21: warning: unused variable 'am_neg' [-Wunused-variable]
  213 |     double am_zero, am_neg, am_pos;
      |                     ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:212:18: warning: unused variable 'zu2' [-Wunused-variable]
  212 |     double zcf2, zu2;
      |                  ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:212:12: warning: unused variable 'zcf2' [-Wunused-variable]
  212 |     double zcf2, zu2;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:211:9: warning: unused variable 'ideg' [-Wunused-variable]
  211 |     int ideg;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:229:13: warning: unused variable 'q' [-Wunused-variable]
  229 |     double *q, qtemp, fx, fy, fz;
      |             ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c: In function 'Vdc_vec':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c: In function 'Vgreen_coulomb':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:264:9: warning: unused variable 'iatom' [-Wunused-variable]
  264 |     int iatom, ipos;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:263:31: warning: unused variable 'fz' [-Wunused-variable]
  263 |     double *q, qtemp, fx, fy, fz;
      |                               ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:263:27: warning: unused variable 'fy' [-Wunused-variable]
  263 |     double *q, qtemp, fx, fy, fz;
      |                           ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:263:23: warning: unused variable 'fx' [-Wunused-variable]
  263 |     double *q, qtemp, fx, fy, fz;
      |                       ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:263:16: warning: unused variable 'qtemp' [-Wunused-variable]
  263 |     double *q, qtemp, fx, fy, fz;
      |                ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:263:13: warning: unused variable 'q' [-Wunused-variable]
  263 |     double *q, qtemp, fx, fy, fz;
      |             ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:340:9: warning: unused variable 'n' [-Wunused-variable]
  340 |     int n = *nx * *ny * *nz;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:339:9: warning: unused variable 'i' [-Wunused-variable]
  339 |     int i;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c: In function 'Vdc_vecpmg':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:378: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  378 |             #pragma omp parallel for \
      | 
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:45: warning: unused variable 'scale' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |                                             ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:41: warning: unused variable 'dz' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |                                         ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:37: warning: unused variable 'dy' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |                                     ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:33: warning: unused variable 'dx' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |                                 ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:27: warning: unused variable 'dist' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |                           ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:19: warning: unused variable 'charge' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |                   ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:262:13: warning: unused variable 'apos' [-Wunused-variable]
  262 |     double *apos, charge, dist, dx, dy, dz, scale;
      |             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:261:12: warning: unused variable 'atom' [-Wunused-variable]
  261 |     Vatom *atom;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:355:28: warning: unused variable 'fact' [-Wunused-variable]
  355 |     double argument, poly, fact;
      |                            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:355:22: warning: unused variable 'poly' [-Wunused-variable]
  355 |     double argument, poly, fact;
      |                      ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:352:9: warning: unused variable 'ideg' [-Wunused-variable]
  352 |     int ideg, iion;
      |         ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c: In function 'Vgreen_coulombD_direct':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:316:16: warning: unused variable 'qtemp' [-Wunused-variable]
  316 |     double *q, qtemp;
      |                ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:316:13: warning: unused variable 'q' [-Wunused-variable]
  316 |     double *q, qtemp;
      |             ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c: In function 'Vgreen_coulombD':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:368:9: warning: unused variable 'iatom' [-Wunused-variable]
  368 |     int iatom, ipos;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:367:16: warning: unused variable 'qtemp' [-Wunused-variable]
  367 |     double *q, qtemp;
      |                ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:367:13: warning: unused variable 'q' [-Wunused-variable]
  367 |     double *q, qtemp;
      |             ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:60: warning: unused variable 'scale' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                                                            ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:56: warning: unused variable 'dx' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                                                        ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:52: warning: unused variable 'dz' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                                                    ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c: In function 'Vdc_vecsmpbe':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:428:16: warning: variable 'ivect' set but not used [-Wunused-but-set-variable]
  428 |     int ipara, ivect;
      |                ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:48: warning: unused variable 'dy' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                                                ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:40: warning: unused variable 'idist3' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                                        ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:33: warning: unused variable 'dist2' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                                 ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:27: warning: unused variable 'dist' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                           ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:19: warning: unused variable 'charge' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |                   ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:428:9: warning: variable 'ipara' set but not used [-Wunused-but-set-variable]
  428 |     int ipara, ivect;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:427:15: warning: unused variable 'ii' [-Wunused-variable]
  427 |     int n, i, ii;
      |               ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:424:28: warning: unused variable 'fact' [-Wunused-variable]
  424 |     double argument, poly, fact;
      |                            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:424:22: warning: unused variable 'poly' [-Wunused-variable]
  424 |     double argument, poly, fact;
      |                      ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:424:12: warning: unused variable 'argument' [-Wunused-variable]
  424 |     double argument, poly, fact;
      |            ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:423:29: warning: unused variable 'am_pos' [-Wunused-variable]
  423 |     double am_zero, am_neg, am_pos;
      |                             ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:423:21: warning: unused variable 'am_neg' [-Wunused-variable]
  423 |     double am_zero, am_neg, am_pos;
      |                     ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:366:13: warning: unused variable 'apos' [-Wunused-variable]
  366 |     double *apos, charge, dist, dist2, idist3, dy, dz, dx, scale;
      |             ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:422:18: warning: unused variable 'zu2' [-Wunused-variable]
  422 |     double zcf2, zu2;
      |                  ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:365:12: warning: unused variable 'atom' [-Wunused-variable]
  365 |     Vatom *atom;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:422:12: warning: unused variable 'zcf2' [-Wunused-variable]
  422 |     double zcf2, zu2;
      |            ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:421:15: warning: unused variable 'iion' [-Wunused-variable]
  421 |     int ideg, iion;
      |               ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.c:421:9: warning: unused variable 'ideg' [-Wunused-variable]
  421 |     int ideg, iion;
      |         ^~~~
At top level:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:525:14: warning: 'treecalc' defined but not used [-Wunused-function]
  525 | VPRIVATE int treecalc(Vgreen *thee, double *xtar, double *ytar, double *ztar,
      |              ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:505:14: warning: 'treecleanup' defined but not used [-Wunused-function]
  505 | VPRIVATE int treecleanup(Vgreen *thee) {
      |              ^~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vgreen.c:425:14: warning: 'treesetup' defined but not used [-Wunused-function]
  425 | VPRIVATE int treesetup(Vgreen *thee) {
      |              ^~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c:56:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c: In function 'Vfnewton':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c:77:5: note: in expansion of macro 'MAT2'
   77 |     MAT2( iz, 50, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c: In function 'Vnewton':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c:187:5: note: in expansion of macro 'MAT2'
  187 |     MAT2(iz, 50, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c: In function 'Vgetjac':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newtond.c:560:5: note: in expansion of macro 'MAT2'
  560 |     MAT2(iz, 50, 1);
      |     ^~~~
[ 48%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/newdrvd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c
[ 50%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/powerd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vparam.c: In function 'Vparam_readXMLFile':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vparam.c:389:69: warning: 'nalloc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |                 tatoms = (Vparam_AtomData*)Vmem_malloc(thee->vmem, 2*nalloc, sizeof(Vparam_AtomData));
      |                                                                    ~^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vparam.c:309:18: warning: 'natoms' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |     int i, ires, natoms, nalloc, ralloc;
      |                  ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c: In function 'Vnewdriv':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:81:9: warning: unused variable 'maxlev' [-Wunused-variable]
   81 |     int maxlev; /// @todo: Doc
      |         ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:80:9: warning: unused variable 'ierror' [-Wunused-variable]
   80 |     int ierror; /// @todo: Doc
      |         ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c: In function 'Vnewdriv2':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:218:9: warning: unused variable 'i' [-Wunused-variable]
  218 |     int i;
      |         ^
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:216:12: warning: unused variable 'orsnrm_t' [-Wunused-variable]
  216 |     double orsnrm_t;
      |            ^~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:215:12: warning: unused variable 'rsden_t' [-Wunused-variable]
  215 |     double rsden_t;
      |            ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:214:12: warning: unused variable 'rsnrm_t' [-Wunused-variable]
  214 |     double rsnrm_t;
      |            ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:213:9: warning: unused variable 'iters_t' [-Wunused-variable]
  213 |     int iters_t;
      |         ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:212:9: warning: unused variable 'iok_t' [-Wunused-variable]
  212 |     int iok_t;
      |         ^~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:210:9: warning: unused variable 'numlev' [-Wunused-variable]
  210 |     int numlev;
      |         ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:205:12: warning: unused variable 'tsolve' [-Wunused-variable]
  205 |     double tsolve;  /// @todo:  Doc
      |            ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:204:12: warning: unused variable 'tsetupc' [-Wunused-variable]
  204 |     double tsetupc; /// @todo:  Doc
      |            ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:203:12: warning: unused variable 'tsetupf' [-Wunused-variable]
  203 |     double tsetupf; /// @todo:  Doc
      |            ^~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:202:12: warning: unused variable 'oh' [-Wunused-variable]
  202 |     double oh;      /// @todo:  Doc
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:201:12: warning: unused variable 'bf' [-Wunused-variable]
  201 |     double bf;      /// @todo:  Doc
      |            ^~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:199:12: warning: variable 'omegal' set but not used [-Wunused-but-set-variable]
  199 |     double omegal;  /// @todo:  Doc
      |            ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/newdrvd.c:197:12: warning: unused variable 'epsmac' [-Wunused-variable]
  197 |     double epsmac;  /// @todo:  Doc
      |            ^~~~~~
[ 51%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/smoothd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/smoothd.c
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c: In function 'Vpower':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c:69:5: note: in expansion of macro 'MAT2'
   69 |     MAT2(iz, 50, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c:66:9: warning: unused variable 'skipIters' [-Wunused-variable]
   66 |     int skipIters = 0;
      |         ^~~~~~~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c: In function 'Vipower':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c:183:5: note: in expansion of macro 'MAT2'
  183 |     MAT2(iz, 50, 1);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c: In function 'Vmpower':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/powerd.c:306:5: note: in expansion of macro 'MAT2'
  306 |     MAT2(iz, 50, 1);
      |     ^~~~
[ 52%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc && /usr/bin/cc  -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src -I/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/include  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -fPIC   -o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o   -c /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
[ 52%] Built target apbs_generic
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/smoothd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c: In function 'Vfmvfas':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:74:5: note: in expansion of macro 'MAT2'
   74 |     MAT2(iz, 50, *nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:69:12: warning: variable 'errd' set but not used [-Wunused-but-set-variable]
   69 |     double errd;
      |            ^~~~
In file included from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/smoothd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.h:57,
                 from /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:50:
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c: In function 'Vmvfas':
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/generic/vmatrix.h:66:9: warning: unused variable 'dy_iz' [-Wunused-variable]
   66 |     int dy_##mat = dy
      |         ^~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:177:5: note: in expansion of macro 'MAT2'
  177 |     MAT2(iz, 50, *nlev);
      |     ^~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:166:33: warning: unused variable 'ivariv' [-Wunused-variable]
  166 |     int itmax_s, iters_s, nuuu, ivariv, mgsmoo_s, iresid;
      |                                 ^~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:354:13: warning: 'rsnrm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |             Vprtstp(*iok, *iters, rsnrm, rsden, orsnrm);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mgfasd.c:592:24: warning: 'rsden' may be used uninitialized in this function [-Wmaybe-uninitialized]
  592 |             if ((rsnrm / rsden) <= *errtol)
      |                 ~~~~~~~^~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
[ 52%] Built target apbs_mg
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
[ 52%] Built target apbs_pmgc
make  -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/CMakeFiles/apbs.dir/DependInfo.cmake --color=
Scanning dependencies of target apbs
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make  -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
[ 53%] Linking C shared library ../lib/libapbs.so
cd /builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1
/usr/bin/cc -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libapbs.so.1 -o ../lib/libapbs.so.1 generic/CMakeFiles/apbs_generic.dir/nosh.c.o generic/CMakeFiles/apbs_generic.dir/mgparm.c.o generic/CMakeFiles/apbs_generic.dir/femparm.c.o generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o generic/CMakeFiles/apbs_generic.dir/bemparm.c.o generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o generic/CMakeFiles/apbs_generic.dir/apolparm.c.o generic/CMakeFiles/apbs_generic.dir/vacc.c.o generic/CMakeFiles/apbs_generic.dir/valist.c.o generic/CMakeFiles/apbs_generic.dir/vatom.c.o generic/CMakeFiles/apbs_generic.dir/vpbe.c.o generic/CMakeFiles/apbs_generic.dir/vcap.c.o generic/CMakeFiles/apbs_generic.dir/vclist.c.o generic/CMakeFiles/apbs_generic.dir/vstring.c.o generic/CMakeFiles/apbs_generic.dir/vparam.c.o generic/CMakeFiles/apbs_generic.dir/vgreen.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o mg/CMakeFiles/apbs_mg.dir/vgrid.c.o mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o mg/CMakeFiles/apbs_mg.dir/vopot.c.o mg/CMakeFiles/apbs_mg.dir/vpmg.c.o mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o 
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:73: multiple definition of `sconc'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:73: first defined here
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:72: multiple definition of `charge'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:72: first defined here
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:71: multiple definition of `nion'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:71: first defined here
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: multiple definition of `relSize'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: first defined here
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: multiple definition of `vol'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: first defined here
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/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: multiple definition of `conc2'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: first defined here
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: multiple definition of `conc1'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: first defined here
/usr/bin/ld: pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: multiple definition of `v3'; pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o:/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/pmgc/mypdec.h:70: first defined here
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collect2: error: ld returned 1 exit status
make[2]: *** [src/CMakeFiles/apbs.dir/build.make:174: lib/libapbs.so.1] Error 1
make[2]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make[1]: Leaving directory '/builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs'
make[1]: *** [CMakeFiles/Makefile2:329: src/CMakeFiles/apbs.dir/all] Error 2
make: *** [Makefile:153: all] Error 2
error: Bad exit status from /var/tmp/rpm-tmp.YJN4kU (%build)
RPM build errors:
    Bad exit status from /var/tmp/rpm-tmp.YJN4kU (%build)
Child return code was: 1
EXCEPTION: [Error()]
Traceback (most recent call last):
  File "/usr/lib/python3.8/site-packages/mockbuild/trace_decorator.py", line 95, in trace
    result = func(*args, **kw)
  File "/usr/lib/python3.8/site-packages/mockbuild/util.py", line 746, in do_with_status
    raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode)
mockbuild.exception.Error: Command failed: 
 # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/apbs.spec