Mock Version: 1.4.9
Mock Version: 1.4.9
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'], chrootPath='/var/lib/mock/f29-build-18544-10020/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x2001fd6710>timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False
Building target platforms: riscv64
Building for target riscv64
Wrote: /builddir/build/SRPMS/R-caTools-1.17.1-9.fc29.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'], chrootPath='/var/lib/mock/f29-build-18544-10020/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x2001fd6710>timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False
Building target platforms: riscv64
Building for target riscv64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.xaR6W0
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf caTools
+ /usr/bin/mkdir -p caTools
+ cd caTools
+ /usr/bin/gzip -dc /builddir/build/SOURCES/caTools_1.17.1.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ chmod -x caTools/src/Gif2R.cpp caTools/src/GifTools.cpp caTools/src/GifTools.h caTools/src/runfunc.c
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.rcwMLR
+ umask 022
+ cd /builddir/build/BUILD
+ cd caTools
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.9FkMsO
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64
BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64
+ cd caTools
+ mkdir -p /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64/usr/lib64/R/library
+ R CMD INSTALL caTools -l /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64/usr/lib64/R/library
BUILDSTDERR: * installing *source* package 'caTools' ...
BUILDSTDERR: ** package 'caTools' successfully unpacked and MD5 sums checked
BUILDSTDERR: ** libs
g++  -I"/usr/include/R" -DNDEBUG   -I/usr/local/include   -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -c Gif2R.cpp -o Gif2R.o
g++  -I"/usr/include/R" -DNDEBUG   -I/usr/local/include   -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -c GifTools.cpp -o GifTools.o
gcc -I"/usr/include/R" -DNDEBUG   -I/usr/local/include   -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -c runfunc.c -o runfunc.o
BUILDSTDERR: runfunc.c: In function 'sum_exact':
BUILDSTDERR: runfunc.c:147:17: warning: 'partial[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    *Out = partial[0];
BUILDSTDERR:           ~~~~~~~^~~
g++ -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o caTools.so Gif2R.o GifTools.o runfunc.o -L/usr/lib64/R/lib -lR
BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64/usr/lib64/R/library/caTools/libs
BUILDSTDERR: ** R
BUILDSTDERR: ** byte-compile and prepare package for lazy loading
BUILDSTDERR: ** help
BUILDSTDERR: *** installing help indices
  converting help for package 'caTools'
BUILDSTDERR:     finding HTML links ... done
    ENVI                                    html  
    GIF                                     html  
    LogitBoost                              html  
    base64                                  html  
    caTools-internal                        html  
    caTools-package                         html  
    colAUC                                  html  
    combs                                   html  
    predict.LogitBoost                      html  
    runmad                                  html  
    runmean                                 html  
    runminmax                               html  
    runquantile                             html  
    runsd                                   html  
    sample.split                            html  
    sumexact                                html  
    trapz                                   html  
BUILDSTDERR: ** building package indices
BUILDSTDERR: ** testing if installed package can be loaded
BUILDSTDERR: * DONE (caTools)
+ test -d caTools/src
+ cd caTools/src
+ rm -f Gif2R.o GifTools.o runfunc.o caTools.so
+ rm -rf /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64/usr/lib64/R/library/R.css
+ /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.17.1-9.fc29 --unique-debug-suffix -1.17.1-9.fc29.riscv64 --unique-debug-src-base R-caTools-1.17.1-9.fc29.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/caTools
extracting debug info from /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64/usr/lib64/R/library/caTools/libs/caTools.so
/usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
BUILDSTDERR: 180 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
BUILDSTDERR: /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1 1
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.o8IQyT
+ umask 022
+ cd /builddir/build/BUILD
+ cd caTools
+ /usr/bin/R CMD check caTools
* using log directory '/builddir/build/BUILD/caTools/caTools.Rcheck'
* using R version 3.5.0 (2018-04-23)
* using platform: riscv64-koji-linux-gnu (64-bit)
* using session charset: ASCII
* checking for file 'caTools/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'caTools' version '1.17.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'caTools' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Title field: should not end in a period.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
colAUC: no visible global function definition for 'plot'
colAUC: no visible global function definition for 'title'
colAUC: no visible global function definition for 'abline'
colAUC: no visible global function definition for 'legend'
colAUC: no visible global function definition for 'lines'
read.ENVI: no visible global function definition for 'read.table'
read.gif: no visible global function definition for 'download.file'
read.gif: no visible global function definition for 'rgb'
runmad: no visible global function definition for 'runmed'
runmad: no visible binding for global variable 'mad'
runquantile: no visible binding for global variable 'quantile'
runsd: no visible binding for global variable 'sd'
sample.split: no visible global function definition for 'runif'
write.gif: no visible global function definition for 'gray'
write.gif: no visible global function definition for 'colorRampPalette'
write.gif: no visible global function definition for 'col2rgb'
Undefined global functions or variables:
  abline col2rgb colorRampPalette download.file gray legend lines mad
  plot quantile read.table rgb runif runmed sd title
Consider adding
  importFrom("grDevices", "col2rgb", "colorRampPalette", "gray", "rgb")
  importFrom("graphics", "abline", "legend", "lines", "plot", "title")
  importFrom("stats", "mad", "quantile", "runif", "runmed", "sd")
  importFrom("utils", "download.file", "read.table")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Packages unavailable to check Rd xrefs: 'fields', 'spatstat', 'R2HTML', 'pixmap', 'gplots', 'RColorBrewer', 'epitools', 'XML', 'exactRankTests', 'coin', 'ROCR', 'Epi', 'verification', 'Hmisc', 'gtools', 'magic', 'zoo'
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
BUILDSTDERR: See
BUILDSTDERR:   '/builddir/build/BUILD/caTools/caTools.Rcheck/00check.log'
BUILDSTDERR: for details.
+ exit 0
Processing files: R-caTools-1.17.1-9.fc29.riscv64
Provides: R-caTools = 1.17.1-9.fc29 R-caTools(riscv-64) = 1.17.1-9.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libgcc_s.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) rtld(GNU_HASH)
Processing files: R-caTools-debugsource-1.17.1-9.fc29.riscv64
Provides: R-caTools-debugsource = 1.17.1-9.fc29 R-caTools-debugsource(riscv-64) = 1.17.1-9.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-caTools-debuginfo-1.17.1-9.fc29.riscv64
Provides: R-caTools-debuginfo = 1.17.1-9.fc29 R-caTools-debuginfo(riscv-64) = 1.17.1-9.fc29 debuginfo(build-id) = 362d326e084ad1206716f910067bc65c73b7c002
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-caTools-debugsource(riscv-64) = 1.17.1-9.fc29
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64
Wrote: /builddir/build/RPMS/R-caTools-1.17.1-9.fc29.riscv64.rpm
Wrote: /builddir/build/RPMS/R-caTools-debugsource-1.17.1-9.fc29.riscv64.rpm
Wrote: /builddir/build/RPMS/R-caTools-debuginfo-1.17.1-9.fc29.riscv64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.b87jv5
+ umask 022
+ cd /builddir/build/BUILD
+ cd caTools
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-caTools-1.17.1-9.fc29.riscv64
+ exit 0
Child return code was: 0