Mock Version: 1.4.14
Mock Version: 1.4.14
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'], chrootPath='/var/lib/mock/f31-build-100528-33061/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x15580c0748>timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1565481600
Wrote: /builddir/build/SRPMS/R-lokern-1.1.8-4.fc31.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'], chrootPath='/var/lib/mock/f31-build-100528-33061/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x15580c0748>timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1565481600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.46rzVW
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf lokern
+ /usr/bin/mkdir -p lokern
+ cd lokern
+ /usr/bin/tar -xof -
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lokern_1.1-8.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ RPM_EC=0
BUILDSTDERR: ++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.8ZujPZ
+ umask 022
+ cd /builddir/build/BUILD
+ cd lokern
+ RPM_EC=0
BUILDSTDERR: ++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gc9c00
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64
BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64
+ cd lokern
+ mkdir -p /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library lokern
BUILDSTDERR: * installing *source* package 'lokern' ...
BUILDSTDERR: ** package 'lokern' successfully unpacked and MD5 sums checked
BUILDSTDERR: ** using staged installation
BUILDSTDERR: ** libs
BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/00LOCK-lokern/00new/lokern/libs
BUILDSTDERR: ** R
BUILDSTDERR: ** data
BUILDSTDERR: ** demo
BUILDSTDERR: ** byte-compile and prepare package for lazy loading
BUILDSTDERR: ** help
BUILDSTDERR: *** installing help indices
BUILDSTDERR:     finding HTML links ... done
BUILDSTDERR:     finding level-2 HTML links ... done
BUILDSTDERR: ** building package indices
BUILDSTDERR: ** testing if installed package can be loaded from temporary location
BUILDSTDERR: ** checking absolute paths in shared objects and dynamic libraries
BUILDSTDERR: ** testing if installed package can be loaded from final location
BUILDSTDERR: ** testing if installed package keeps a record of temporary installation path
BUILDSTDERR: * DONE (lokern)
+ test -d lokern/src
+ cd lokern/src
+ rm -f auxkerns.o glkerns.o lokerns.o monitor.o lokern.so
+ rm -f /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/R.css
+ /usr/lib/rpm/find-debuginfo.sh -j8 --strict-build-id -m -i --build-id-seed 1.1.8-4.fc31 --unique-debug-suffix -1.1.8-4.fc31.riscv64 --unique-debug-src-base R-lokern-1.1.8-4.fc31.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/lokern
BUILDSTDERR: 136 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
gfortran -fno-optimize-sibling-calls  -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls  -c auxkerns.f -o auxkerns.o
gfortran -fno-optimize-sibling-calls  -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls  -c glkerns.f -o glkerns.o
gfortran -fno-optimize-sibling-calls  -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls  -c lokerns.f -o lokerns.o
gcc -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -c monitor.c -o monitor.o
gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o lokern.so auxkerns.o glkerns.o lokerns.o monitor.o -L -L -lgfortran -lm -L/usr/lib64/R/lib -lR
  converting help for package 'lokern'
    KernS-methods                           html  
    glkerns                                 html  
    lokerns                                 html  
    varNPreg                                html  
    xSim                                    html  
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/lokern/libs/lokern.so
extracting debug info from /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/lokern/libs/lokern.so
original debug info size: 140kB, size after compression: 140kB
/usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.1VVjNY
+ umask 022
+ cd /builddir/build/BUILD
+ cd lokern
+ /usr/bin/R CMD check lokern
BUILDSTDERR: Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
BUILDSTDERR:   cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/bioc/src/contrib:
BUILDSTDERR:   cannot open URL 'https://bioconductor.org/packages/3.9/bioc/src/contrib/PACKAGES'
BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/annotation/src/contrib:
BUILDSTDERR:   cannot open URL 'https://bioconductor.org/packages/3.9/data/annotation/src/contrib/PACKAGES'
BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/experiment/src/contrib:
BUILDSTDERR:   cannot open URL 'https://bioconductor.org/packages/3.9/data/experiment/src/contrib/PACKAGES'
BUILDSTDERR:   Running 'glk-lok-new.R'
BUILDSTDERR:   Running 'glk1.R'
BUILDSTDERR:   Comparing 'glk1.Rout' to 'glk1.Rout.save' ...  Running 'infloop-bug.R'
BUILDSTDERR:   Running 'lok1.R'
BUILDSTDERR:   Comparing 'lok1.Rout' to 'lok1.Rout.save' ...
BUILDSTDERR: See
BUILDSTDERR:   '/builddir/build/BUILD/lokern/lokern.Rcheck/00check.log'
BUILDSTDERR: for details.
+ RPM_EC=0
BUILDSTDERR: ++ jobs -p
+ exit 0
* using log directory '/builddir/build/BUILD/lokern/lokern.Rcheck'
* using R version 3.6.1 (2019-07-05)
* using platform: riscv64-redhat-linux-gnu (64-bit)
* using session charset: ASCII
* checking for file 'lokern/DESCRIPTION' ... OK
* this is package 'lokern' version '1.1-8'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'lokern' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... WARNING
Error: package or namespace load failed for 'lokern' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called 'sfsmisc'
Execution halted
It looks like this package has a loading problem when not on .libPaths:
see the messages for details.
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
38c38
< -3.0683 -1.6676  0.7053  0.4094  1.7819  4.2125 
---
> -3.0680 -1.6680  0.7053  0.4094  1.7820  4.2130 
9c9
< -3.1323 -1.6148  0.7583  0.3969  1.7713  4.4505 
---
> -3.1320 -1.6150  0.7583  0.3969  1.7710  4.4500 
79c79
< -3.0721 -1.6666  0.7102  0.4164  1.7826  4.2935 
---
> -3.0720 -1.6670  0.7102  0.4164  1.7830  4.2940 
82c82
< -41.231  -8.198  -5.577  -4.945  -1.786  35.279 
---
> -41.230  -8.198  -5.577  -4.945  -1.786  35.280 
195c195
< -688.691  -74.741   26.413   -4.829  169.492  352.630 
---
> -688.700  -74.740   26.410   -4.829  169.500  352.600 
205c205
< 0.07662 0.07995 0.09398 0.09034 0.09501 0.10938 
---
> 0.07662 0.07995 0.09398 0.09034 0.09501 0.10940 
 OK
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING
Processing files: R-lokern-1.1.8-4.fc31.riscv64
Provides: R(lokern) = 1.1-8 R-lokern = 1.1.8-4.fc31 R-lokern(riscv-64) = 1.1.8-4.fc31
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: R(grDevices) R(graphics) R(sfsmisc) >= 1.0-12 R(stats) R(utils) R-core ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH)
Processing files: R-lokern-debugsource-1.1.8-4.fc31.riscv64
Provides: R-lokern-debugsource = 1.1.8-4.fc31 R-lokern-debugsource(riscv-64) = 1.1.8-4.fc31
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: R-lokern-debuginfo-1.1.8-4.fc31.riscv64
Provides: R-lokern-debuginfo = 1.1.8-4.fc31 R-lokern-debuginfo(riscv-64) = 1.1.8-4.fc31 debuginfo(build-id) = ddc114c24245b0563b10b96a42d5b0abcfcaaae0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: R-lokern-debugsource(riscv-64) = 1.1.8-4.fc31
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64
Wrote: /builddir/build/RPMS/R-lokern-debugsource-1.1.8-4.fc31.riscv64.rpm
Wrote: /builddir/build/RPMS/R-lokern-1.1.8-4.fc31.riscv64.rpm
Wrote: /builddir/build/RPMS/R-lokern-debuginfo-1.1.8-4.fc31.riscv64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.PBY3L0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lokern
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64
+ RPM_EC=0
BUILDSTDERR: ++ jobs -p
+ exit 0
Child return code was: 0