Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/openms.spec'], chrootPath='/var/lib/mock/f33-build-178276-44959/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/openms.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1582588800 Wrote: /builddir/build/SRPMS/openms-2.5.0-2.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/openms.spec'], chrootPath='/var/lib/mock/f33-build-178276-44959/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/openms.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1582588800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.nD8T2W + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf OpenMS-Release2.5.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/OpenMS-Release2.5.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd OpenMS-Release2.5.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -rf cmake/MacOSX + dos2unix share/OpenMS/examples/simulation/FASTAProteinAbundanceSampling.py dos2unix: converting file share/OpenMS/examples/simulation/FASTAProteinAbundanceSampling.py to Unix format... + /usr/bin/cat /builddir/build/SOURCES/openms-remove_testflag.patch + /usr/bin/patch -p0 -s --fuzz=0 --no-backup-if-mismatch + sed -e 's| ||g' -i share/OpenMS/DESKTOP/TOPPAS.appdata.xml share/OpenMS/DESKTOP/TOPPView.appdata.xml + find . -type f -name '*.h' -exec chmod 0644 '{}' ';' + find . -type f -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5dHXNX + umask 022 + cd /builddir/build/BUILD + cd OpenMS-Release2.5.0 + mkdir -p build + pushd build ~/build/BUILD/OpenMS-Release2.5.0/build ~/build/BUILD/OpenMS-Release2.5.0 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH ++ gcc -dumpversion + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCMAKE_CXX_COMPILER_VERSION:STRING=10 -DENABLE_UPDATE_CHECK:BOOL=OFF -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DBUILD_EXAMPLES:BOOL=OFF -DENABLE_TOPP_TESTING:BOOL=OFF -DENABLE_CLASS_TESTING:BOOL=OFF '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' '-DCMAKE_C_FLAGS_RELEASE:STRING=-Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' -DCMAKE_VERBOSE_MAKEFILE=TRUE -DCMAKE_PREFIX_PATH=/usr -DENABLE_SVN=OFF -DCMAKE_BUILD_TYPE=Release -DBOOST_USE_STATIC=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES -DMT_ENABLE_OPENMP=ON -DENABLE_GCC_WERROR:BOOL=OFF -DFIDO_BINARY:FILEPATH=/usr/bin/Fido -DFIDOCHOOSEPARAMS_BINARY:FILEPATH=/usr/bin/FidoChooseParameters -DPERCOLATOR_BINARY:FILEPATH=/usr/bin/percolator -DBOOST_USE_STATIC:BOOL=OFF -DBoost_INCLUDE_DIR:PATH=/usr/include -DBoost_IOSTREAMS_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_iostreams.so -DBoost_MATH_C99_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_math_c99.so -DBoost_REGEX_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libboost_regex.so -DENABLE_TUTORIALS:BOOL=OFF -DENABLE_UNITYBUILD:BOOL=OFF -DHAS_XSERVER:BOOL=OFF -DCMAKE_INSTALL_PREFIX=/usr -DINSTALL_BIN_DIR:PATH=bin -DINSTALL_CMAKE_DIR:PATH=lib64/cmake/OpenMS -DINSTALL_DOC_DIR:PATH=share/doc/openms-doc -DINSTALL_INCLUDE_DIR:PATH=include -DINSTALL_LIB_DIR:PATH=lib64/OpenMS -DINSTALL_SHARE_DIR:PATH=share/OpenMS -DPACKAGE_TYPE:STRING=none -DWITH_GUI:BOOL=ON -DXercesC_INCLUDE_DIRS:PATH=/usr/include/xercesc -DXercesC_LIBRARY_RELEASE:FILEPATH=/usr/lib64/libxerces-c.so -DOPENMS_DISABLE_UPDATE_CHECK:BOOL=OFF -DENABLE_UPDATE_CHECK:BOOL=OFF -DGIT_TRACKING:BOOL=OFF -DOPENMS_64BIT_ARCHITECTURE:BOOL=ON -DPYOPENMS=OFF .. -- The C compiler identification is GNU 10.0.1 -- The CXX compiler identification is GNU 10.0.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Building OpenMS 2.5.0 -- [CMake is not tracking Git commits and branching ('-D GIT_TRACKING=Off')] -- OpenMP support requested: ON -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Architecture: 64 bit -- Performing Test WITH_FPIC -- Performing Test WITH_FPIC - Success -- Compiler checks for conversion: OFF CMake Warning at cmake/setup_lib_find_paths.cmake:46 (message): Unless you are certain that you have all contributing libraries in system paths, please specify an explicit path to the built contrib libraries via -DOPENMS_CONTRIB_LIBS Call Stack (most recent call first): CMakeLists.txt:376 (include) -- Found Boost: /usr/include (found suitable version "1.69.0", minimum required is "1.48.0") -- Adding library OpenSwathAlgo -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Adding library OpenSwathAlgo - SUCCESS -- Found XercesC: /usr/lib64/libxerces-c.so -- Found Boost: /usr/include (found suitable version "1.69.0", minimum required is "1.48.0") found components: iostreams date_time math_c99 regex -- Found Boost version 1.69.0 -- Found SEQAN: /usr/include (found suitable version "1.4.2", minimum required is "1.4.0") -- Found LIBSVM: /usr/lib64/libsvm.so (found suitable version "3.2.4", minimum required is "2.91") -- Found COIN: /usr/include -- Found GLPK: /usr/lib64/libglpk.so -- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") -- Found BZip2: /usr/lib64/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so -- Looking for BZ2_bzCompressInit in /usr/lib64/libbz2.so - found -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.3.4") -- Found WM5: /usr/include/WildMagic -- Found SQLite: /usr/include (found version "3.31.1") -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- HDF5: Using hdf5 compiler wrapper to determine CXX configuration -- Found HDF5: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so (found version "1.10.5") found components: C CXX HL -- Found Qt 5.14.2 -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Info: CF_OPENMS_DATA_PATH: -- Info: CF_OPENMS_DOC_PATH: -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Check size of unsigned char -- Check size of unsigned char - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of int32_t -- Check size of int32_t - done -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint8_t -- Check size of uint8_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Adding library OpenMS -- Adding library OpenMS - SUCCESS -- Found Boost: /usr/include (found suitable version "1.69.0", minimum required is "1.48.0") -- Adding library SuperHirn -- Adding library SuperHirn - SUCCESS -- Adding library OpenMS_GUI -- Adding library OpenMS_GUI - SUCCESS -- No resource file (/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded. -- No resource file (/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded. -- Documentation is built (-D ENABLE_DOCS=On). -- Found Doxygen: /usr/bin/doxygen (found version "1.8.17") found components: doxygen dot -- Disabled tutorials (-D ENABLE_TUTORIALS=Off). -- -- ----------------------------------------------------------------- -- -- You have successfully configured OpenMS. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_SKIP_INSTALL_RPATH ENABLE_SVN FIDOCHOOSEPARAMS_BINARY FIDO_BINARY INCLUDE_INSTALL_DIR INSTALL_CMAKE_DIR LIB_INSTALL_DIR LIB_SUFFIX OPENMS_DISABLE_UPDATE_CHECK PERCOLATOR_BINARY SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/OpenMS-Release2.5.0/build + /usr/bin/make -O -j4 V=1 VERBOSE=1 OpenMS TOPP UTILS GUI /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-Release2.5.0 -B/builddir/build/BUILD/OpenMS-Release2.5.0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/make -f CMakeFiles/Makefile2 OpenMS make[1]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/cmake -S/builddir/build/BUILD/OpenMS-Release2.5.0 -B/builddir/build/BUILD/OpenMS-Release2.5.0/build --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[1]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/OpenMS-Release2.5.0/build/CMakeFiles 57 make[1]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/make -f CMakeFiles/Makefile2 src/openms/CMakeFiles/OpenMS.dir/all /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' cd /builddir/build/BUILD/OpenMS-Release2.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-Release2.5.0 /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo /builddir/build/BUILD/OpenMS-Release2.5.0/build /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend.internal". Dependee "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/depend.internal". Scanning dependencies of target OpenSwathAlgo make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/make -f src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build.make src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 0%] Building CXX object src/openswathalgo/CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Linking CXX shared library ../../lib/libOpenSwathAlgo.so cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenSwathAlgo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libOpenSwathAlgo.so -o ../../lib/libOpenSwathAlgo.so CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/MRMScoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/Scoring.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp.o CMakeFiles/OpenSwathAlgo.dir/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp.o make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Built target OpenSwathAlgo make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' cd /builddir/build/BUILD/OpenMS-Release2.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-Release2.5.0 /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms /builddir/build/BUILD/OpenMS-Release2.5.0/build /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/depend.internal". Dependee "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/depend.internal". Scanning dependencies of target OpenMS_autogen make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS_autogen.dir/build.make src/openms/CMakeFiles/OpenMS_autogen.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Automatic MOC and UIC for target OpenMS cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. 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"SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/AASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Element.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NASequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Residue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/Tagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ClassTest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Constants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Exception.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Factory.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FactoryBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Helpers.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/LogStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Macros.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/StreamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/TypeAsString.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/Types.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/CONCEPT/VersionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Date.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Map.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Param.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/String.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Base64.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CVMappingFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CachedMzML.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/CsvFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTA2DFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/DTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/EDTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FASTAFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/FileTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipIfstream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/GzipInputStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IdXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/InspectOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/KroenikFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MS2File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MSstatsFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MsInspectFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzDataFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTab.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzTabFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/MzXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/OSWFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/QcMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SVOutStream.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SequestOutfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SqliteConnector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/SwathFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TextFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TraMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XMassFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemInfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/FORMAT/ZlibCompression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/DataStructures.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/AreaIterator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/BaseFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConsensusMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/ConversionHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/DPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Feature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureHandle.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/FeatureMap.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMFeature.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSChromatogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MSSpectrum.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/MassTrace.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/Peak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/PeakIndex.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeManager.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RangeUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/RichPeak2D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/KERNEL/StandardTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/GridSearch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSAC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/RegressionUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Acquisition.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTerm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermList.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/CVTermListInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ContactPerson.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataArrays.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DataProcessing.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Digestion.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Gradient.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/HPLC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingSoftware.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/DataQuery.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MetaData.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeParentMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/MoleculeQueryMatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMolecule.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ParentMoleculeGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/QueryMatchGroup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoreType.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Identification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IdentificationHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Instrument.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/InstrumentSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonDetector.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/IonSource.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MSQuantifications.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MassAnalyzer.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Modification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideEvidence.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/PeptideIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Precursor.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Product.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinHit.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ProteinIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Sample.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SampleTreatment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/ScanWindow.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Software.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SourceFile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/SpectrumSettings.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/METADATA/Tagging.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Contaminants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/FragmentMassError.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MissedCleavages.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/MzCalibration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/QCBase.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/RTAlignment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/QC/TIC.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/EGHModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/MSSim.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RTSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SIMULATION/SimTypes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/File.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/JavaInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/RWrapper.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/StopWatch.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/SysInfo.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h" AutoGen: Parsing "SRC:/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDRipper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/PScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ConsoleUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/INIUpdater.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ParameterInformation.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/TOPPBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/APPLICATIONS/ToolHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/AASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/CrossLinksDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Element.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ElementDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinition.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModificationsDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NASequence.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RNaseDigestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Residue.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/ResidueModification.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Ribonucleotide.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/Tagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp" AutoGen: Parsing "SRC:/src/openms/source/CHEMISTRY/WeightWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ClassTest.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Constants.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Exception.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/FuzzyStringComparator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Init.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogConfigHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/LogStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/PrecisionWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/ProgressLogger.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/SingletonRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/StreamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/TypeAsString.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/Types.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdIndexer.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/UniqueIdInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/CONCEPT/VersionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Adduct.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVMappings.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CVReference.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/CalibrationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ChargePair.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Compomer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DPosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DRange.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DataValue.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Date.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DateTime.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/GridFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/LPWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Map.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MassExplainer.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Matrix.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/Param.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/QTCluster.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/String.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringListUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/StringUtils.cpp" AutoGen: Parsing "SRC:/src/openms/source/DATASTRUCTURES/ToolDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/ID/IDFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Base64.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2Ifstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/Bzip2InputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CVMappingFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CachedMzML.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ChromeleonFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CompressedInputSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ConsensusXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ControlledVocabulary.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/CsvFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTA2DFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/DTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/EDTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ExperimentalDesignFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FASTAFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FeatureXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/FileTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipIfstream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/GzipInputStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/HDF5Connector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IBSpectraFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IdXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/InspectOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/KroenikFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/LibSVMEncoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MRMFeatureQCFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MS2File.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSNumpressCoder.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSPGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MSstatsFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotGenericFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotRemoteQuery.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MascotXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MsInspectFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzDataFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzIdentMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzQuantMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTab.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzTabFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/MzXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSACSVFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OMSSAXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/OSWFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PTMXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ParamXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PeakTypeEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepNovoOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PepXMLFileMascot.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/PercolatorOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ProtXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/QcMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SVOutStream.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SequestOutfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SpecArrayFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SqliteConnector.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/SwathFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TextFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ToolDescriptionFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TraMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/TransformationXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/UnimodXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XMassFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XQuestResultXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemInfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/XTandemXMLFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/FORMAT/ZlibCompression.cpp" AutoGen: Parsing "SRC:/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/AreaIterator.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/BaseFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ChromatogramTools.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConsensusMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/ConversionHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/DPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Feature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureHandle.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/FeatureMap.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMFeature.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MRMTransitionGroup.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSChromatogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MSSpectrum.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/MassTrace.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/OnDiscMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/Peak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/PeakIndex.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RangeManager.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/RichPeak2D.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/SpectrumHelper.cpp" AutoGen: Parsing "SRC:/src/openms/source/KERNEL/StandardTypes.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/BilinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/CubicSpline2d.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/EmgGradientDescent.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/GridSearch.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/LinearInterpolation.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MSNumpress.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/MathFunctions.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NNLS/NNLS.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSAC.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelLinear.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/MISC/SplineBisection.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/AveragePosition.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GaussFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/Histogram.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp" AutoGen: Parsing "SRC:/src/openms/source/MATH/STATISTICS/ROCCurve.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Acquisition.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/AcquisitionInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTerm.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermList.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/CVTermListInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ChromatogramSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ContactPerson.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataArrays.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DataProcessing.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Digestion.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIDTagger.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/DocumentIdentifier.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalDesign.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ExperimentalSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Gradient.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/HPLC.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationData.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Identification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IdentificationHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Instrument.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/InstrumentSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonDetector.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/IonSource.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MSQuantifications.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MassAnalyzer.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoInterface.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/MetaInfoRegistry.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Modification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideEvidence.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/PeptideIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Precursor.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Product.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinHit.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ProteinIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Sample.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SampleTreatment.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/ScanWindow.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Software.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SourceFile.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumIdentification.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/SpectrumSettings.cpp" AutoGen: Parsing "SRC:/src/openms/source/METADATA/Tagging.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Contaminants.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/FragmentMassError.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MissedCleavages.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2IdentificationRate.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/Ms2SpectrumStats.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/MzCalibration.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/QCBase.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/RTAlignment.cpp" AutoGen: Parsing "SRC:/src/openms/source/QC/TIC.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DetectabilitySimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/DigestSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/EGHModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/IonizationSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/MSSim.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RTSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/File.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/FileWatcher.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/JavaInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/NetworkGetRequest.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/RWrapper.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/StopWatch.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/SysInfo.cpp" AutoGen: Parsing "SRC:/src/openms/source/SYSTEM/UpdateCheck.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp" AutoGen: Parsing "SRC:/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp" AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/WildMagic -I/usr/include/xercesc -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/10 -I/usr/include/c++/10/riscv64-redhat-linux -I/usr/include/c++/10/backward -I/usr/lib/gcc/riscv64-redhat-linux/10/include -I/usr/local/include -p include/OpenMS/FORMAT -o /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/QMGZ3XHWZJ/moc_MascotRemoteQuery.cpp /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/FileWatcher.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/WildMagic -I/usr/include/xercesc -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/10 -I/usr/include/c++/10/riscv64-redhat-linux -I/usr/include/c++/10/backward -I/usr/lib/gcc/riscv64-redhat-linux/10/include -I/usr/local/include -p include/OpenMS/SYSTEM -o /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_FileWatcher.cpp /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/SYSTEM/FileWatcher.h AutoMoc: Generating "SRC:/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp", because it doesn't exist, from "SRC:/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h" /usr/lib64/qt5/bin/moc -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -I/usr/include/libsvm -I/usr/include/eigen3 -I/usr/include/WildMagic -I/usr/include/xercesc -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -I/usr/include -I/usr/include/c++/10 -I/usr/include/c++/10/riscv64-redhat-linux -I/usr/include/c++/10/backward -I/usr/lib/gcc/riscv64-redhat-linux/10/include -I/usr/local/include -p include/OpenMS/SYSTEM -o /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/ACY6PAVLTH/moc_NetworkGetRequest.cpp /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h AutoMoc: Generating MOC compilation "SRC:/build/src/openms/OpenMS_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/src/openms/CMakeFiles/OpenMS_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/src/openms/CMakeFiles/OpenMS_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[2]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Built target OpenMS_autogen make[2]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/depend make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' cd /builddir/build/BUILD/OpenMS-Release2.5.0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/OpenMS-Release2.5.0 /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms /builddir/build/BUILD/OpenMS-Release2.5.0/build /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS.dir/depend.internal". Dependee "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/CMakeFiles/OpenMS.dir/depend.internal". Scanning dependencies of target OpenMS make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /usr/bin/make -f src/openms/CMakeFiles/OpenMS.dir/build.make src/openms/CMakeFiles/OpenMS.dir/build make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/Constants.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/Constants.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/INTERFACES_IMPL/MockImplementation.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/Exception.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/Exception.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/OpenMS_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/mocs_compilation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/Init.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/Init.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/GlobalExceptionHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogConfigHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/LogConfigHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/PrecisionWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/PrecisionWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/LogStream.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/LogStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/ClassTest.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/ClassTest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/ClassTest.cpp:43: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/ClassTest.cpp:39: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/SingletonRegistry.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/SingletonRegistry.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/TypeAsString.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/TypeAsString.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/Types.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/Types.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/ProgressLogger.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/ProgressLogger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/StreamHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/StreamHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/UniqueIdGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 3%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdIndexer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/UniqueIdIndexer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/UniqueIdInterface.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/UniqueIdInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/VersionInfo.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/VersionInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/VersionInfo.cpp: In static member function 'static OpenMS::VersionInfo::VersionDetails OpenMS::VersionInfo::getVersionStruct()': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/VersionInfo.cpp:169:51: warning: implicitly-declared 'OpenMS::VersionInfo::VersionDetails& OpenMS::VersionInfo::VersionDetails::operator=(const OpenMS::VersionInfo::VersionDetails&)' is deprecated [-Wdeprecated-copy] 169 | result = VersionDetails::create(getVersion()); | ^ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/VersionInfo.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/VersionInfo.h:79:7: note: because 'OpenMS::VersionInfo::VersionDetails' has user-provided 'OpenMS::VersionInfo::VersionDetails::VersionDetails(const OpenMS::VersionInfo::VersionDetails&)' 79 | VersionDetails(const VersionDetails & other): | ^~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/FileWatcher.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/FileWatcher.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/JavaInfo.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/JavaInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/File.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/File.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 1%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CONCEPT/FuzzyStringComparator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CONCEPT/FuzzyStringComparator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/NetworkGetRequest.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/NetworkGetRequest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/StopWatch.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/StopWatch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AsymmetricStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/SysInfo.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/SysInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/BasicStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/RWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/RWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/AveragePosition.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/AveragePosition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 5%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/SYSTEM/UpdateCheck.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/SYSTEM/UpdateCheck.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/Histogram.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/Histogram.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GumbelDistributionFitter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GammaDistributionFitter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/GaussFitter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/GaussFitter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/QuadraticRegression.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BilinearInterpolation.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/BilinearInterpolation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/ROCCurve.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/ROCCurve.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/BSpline2d.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/BSpline2d.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/CubicSpline2d.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/CubicSpline2d.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/GridSearch.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/GridSearch.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/LinearInterpolation.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/LinearInterpolation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MathFunctions.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/MathFunctions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/MSNumpress.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/MSNumpress.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSAC.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/RANSAC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModel.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/RANSACModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/EmgGradientDescent.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/EmgGradientDescent.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/LinearRegression.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/LinearRegression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelLinear.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/RANSACModelLinear.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/SplineBisection.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/SplineBisection.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 8%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/RANSACModelQuadratic.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/BinaryTreeNode.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/MISC/NNLS/NNLS.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/MISC/NNLS/NNLS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Adduct.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/Adduct.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ChargePair.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ChargePair.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Compomer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/Compomer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConvexHull2D.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ConstRefVector.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingTerm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappingRule.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVReference.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/CVReference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DBoundingBox.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DIntervalBase.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CVMappings.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/CVMappings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DPosition.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DPosition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DRange.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DRange.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 10%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/CalibrationData.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/CalibrationData.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Date.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/Date.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DataValue.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DataValue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DateTime.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DateTime.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DistanceMatrix.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/DefaultParamHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtils.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ListUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ListUtilsIO.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/GridFeature.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/GridFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Map.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/Map.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/LPWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/LPWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 7%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MassExplainer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/MassExplainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Matrix.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/Matrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/MatchedIterator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/QTCluster.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/QTCluster.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 12%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/FASTAContainer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/Param.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/Param.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringListUtils.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/StringListUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/ToolDescription.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void __gnu_cxx::new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/10/bits/alloc_traits.h:507:17: required from 'static void std::allocator_traits >::construct(std::allocator_traits >::allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; std::allocator_traits >::allocator_type = std::allocator]' /usr/include/c++/10/bits/stl_vector.h:1189:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; std::vector<_Tp, _Alloc>::value_type = OpenMS::Internal::ToolExternalDetails]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:137:41: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/c++/10/riscv64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/10/bits/allocator.h:46, from /usr/include/c++/10/string:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:35: /usr/include/c++/10/ext/new_allocator.h:151:4: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 151 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'constexpr _Tp* std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {OpenMS::Internal::ToolExternalDetails}]': /usr/include/c++/10/bits/stl_uninitialized.h:91:3: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/10/bits/stl_uninitialized.h:150:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/10/bits/stl_uninitialized.h:325:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = std::move_iterator; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/10/bits/stl_uninitialized.h:333:41: required from '_ForwardIterator std::__uninitialized_move_a(_InputIterator, _InputIterator, _ForwardIterator, _Allocator&) [with _InputIterator = OpenMS::Internal::ToolExternalDetails*; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Allocator = std::allocator]' /usr/include/c++/10/bits/vector.tcc:736:34: required from 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; std::vector<_Tp, _Alloc>::iterator = std::vector::iterator]' /usr/include/c++/10/bits/stl_vector.h:1662:19: required from 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(std::vector<_Tp, _Alloc>::iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; std::vector<_Tp, _Alloc>::iterator = std::vector::iterator]' /usr/include/c++/10/bits/stl_vector.h:1380:22: required from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; std::vector<_Tp, _Alloc>::iterator = std::vector::iterator; std::vector<_Tp, _Alloc>::const_iterator = std::vector::const_iterator]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:157:115: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:55:33: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 55 | OPENMS_DLLAPI MappingParam& MappingParam::operator=(const MappingParam& rhs) | ^~~~~~~~~~~~ In file included from /usr/include/c++/10/bits/alloc_traits.h:33, from /usr/include/c++/10/ext/alloc_traits.h:34, from /usr/include/c++/10/bits/basic_string.h:40, from /usr/include/c++/10/string:55, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/LogStream.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/ToolDescription.cpp:35: /usr/include/c++/10/bits/stl_construct.h:113:14: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(OpenMS::Internal::ToolExternalDetails&&)' first required here 113 | return ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Acquisition.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Acquisition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/AbsoluteQuantitationStandards.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/AcquisitionInfo.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/AcquisitionInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/CVTerm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/CVTerm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermList.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/CVTermList.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/CVTermListInterface.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/CVTermListInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ContactPerson.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ContactPerson.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 14%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/String.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/String.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/DATASTRUCTURES/StringUtils.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/DATASTRUCTURES/StringUtils.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/DataArrays.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/DataArrays.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Digestion.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Digestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ChromatogramSettings.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ChromatogramSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 15%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/DataProcessing.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/DataProcessing.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIdentifier.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/DocumentIdentifier.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/DocumentIDTagger.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/DocumentIDTagger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Gradient.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Gradient.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/HPLC.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/HPLC.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/IdentificationHit.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/IdentificationHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Identification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Identification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/InstrumentSettings.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/InstrumentSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Instrument.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Instrument.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalSettings.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ExperimentalSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/IonDetector.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/IonDetector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/IonSource.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/IonSource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 17%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ExperimentalDesign.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ExperimentalDesign.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/MassAnalyzer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/MassAnalyzer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfo.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/MetaInfo.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoInterface.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/MetaInfoInterface.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoDescription.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/MetaInfoDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Modification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Modification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideEvidence.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/PeptideEvidence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/MetaInfoRegistry.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/MetaInfoRegistry.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Precursor.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Precursor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideHit.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/PeptideHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/PeptideIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/PeptideIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Product.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Product.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinHit.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ProteinHit.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Sample.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Sample.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 19%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/MSQuantifications.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/MSQuantifications.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/SampleTreatment.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/SampleTreatment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ScanWindow.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ScanWindow.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Software.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Software.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/SourceFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/SourceFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/SpectrumIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ProteinIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ProteinIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/Tagging.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/Tagging.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumSettings.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/SpectrumSettings.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumLookup.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/SpectrumLookup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/AreaIterator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/AreaIterator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 21%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/SpectrumMetaDataLookup.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/BaseFeature.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/BaseFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusFeature.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/ConsensusFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/ConversionHelper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/ConversionHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/DPeak.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/DPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationData.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ID/IdentificationData.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureHandle.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/FeatureHandle.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/Feature.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/Feature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/ConsensusMap.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/ConsensusMap.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMFeature.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/MRMFeature.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/MassTrace.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/MassTrace.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/METADATA/ID/IdentificationDataConverter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/MRMTransitionGroup.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/MRMTransitionGroup.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/OnDiscMSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/OnDiscMSExperiment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 22%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/FeatureMap.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/FeatureMap.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak1D.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/Peak1D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/PeakIndex.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/PeakIndex.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/RangeManager.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/RangeManager.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/RichPeak2D.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/RichPeak2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/StandardTypes.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/StandardTypes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/Peak2D.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/Peak2D.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/ChromatogramPeak.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/MSSpectrum.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/MSSpectrum.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/SpectrumHelper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/SpectrumHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 24%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/MSExperiment.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/MSExperiment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/ChromatogramTools.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/KERNEL/MSChromatogram.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/Element.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/CrossLinksDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/CrossLinksDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/AASequence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ElementDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzyme.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeRNA.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeProtein.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ModificationDefinition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/DigestionEnzymeDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 26%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinitionsSet.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NASequence.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/NASequence.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/NASequence.cpp: In static member function 'static void OpenMS::NASequence::parseString_(const OpenMS::String&, OpenMS::NASequence&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/NASequence.cpp:377:27: warning: catching polymorphic type 'class OpenMS::Exception::ElementNotFound' by value [-Wcatch-value=] 377 | catch (Exception::ElementNotFound) | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationsDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ModificationsDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ProteaseDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ProteaseDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Residue.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/Residue.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 28%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/RNaseDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueModification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ResidueModification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Ribonucleotide.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/Ribonucleotide.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ResidueDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ResidueDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RibonucleotideDB.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SimpleTSGXLMS.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/RNaseDigestion.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/RNaseDigestion.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SpectrumAnnotator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp: In member function 'void OpenMS::SpectrumAnnotator::addIonMatchStatistics(OpenMS::PeptideIdentification&, OpenMS::MSSpectrum&, const OpenMS::TheoreticalSpectrumGenerator&, const OpenMS::SpectrumAlignment&) const': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp:235:31: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 235 | catch (std::out_of_range) | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 29%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/Tagger.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/Tagger.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/WeightWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/WeightWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 31%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 33%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/AcqusHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/FidHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MascotXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzDataHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 35%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp: In member function 'void OpenMS::Internal::MzIdentMLDOMHandler::parsePeptideElements_(xercesc_3_2::DOMNodeList*)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp:738:31: warning: catching polymorphic type 'class OpenMS::Exception::MissingInformation' by value [-Wcatch-value=] 738 | catch (Exception::MissingInformation) | ^~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: In member function 'void OpenMS::Internal::MzMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:94:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 94 | options_ = opt; | ^~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h:46, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/PTMXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ParamXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/MzXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 36%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void __gnu_cxx::new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails]': /usr/include/c++/10/bits/alloc_traits.h:507:17: required from 'static void std::allocator_traits >::construct(std::allocator_traits >::allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}; _Tp = OpenMS::Internal::ToolExternalDetails; std::allocator_traits >::allocator_type = std::allocator]' /usr/include/c++/10/bits/stl_vector.h:1189:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator; std::vector<_Tp, _Alloc>::value_type = OpenMS::Internal::ToolExternalDetails]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:194:44: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/c++/10/riscv64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/10/bits/allocator.h:46, from /usr/include/c++/10/string:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /usr/include/c++/10/ext/new_allocator.h:151:4: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 151 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'void __gnu_cxx::new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription]': /usr/include/c++/10/bits/alloc_traits.h:507:17: required from 'static void std::allocator_traits >::construct(std::allocator_traits >::allocator_type&, _Up*, _Args&& ...) [with _Up = OpenMS::Internal::ToolDescription; _Args = {const OpenMS::Internal::ToolDescription&}; _Tp = OpenMS::Internal::ToolDescription; std::allocator_traits >::allocator_type = std::allocator]' /usr/include/c++/10/bits/stl_vector.h:1189:30: required from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator; std::vector<_Tp, _Alloc>::value_type = OpenMS::Internal::ToolDescription]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:200:30: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ In file included from /usr/include/c++/10/riscv64-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/10/bits/allocator.h:46, from /usr/include/c++/10/string:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Exception.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/CONCEPT/Macros.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h:38, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp:35: /usr/include/c++/10/ext/new_allocator.h:151:4: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 151 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/XMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/TraMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzDataValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/SemanticValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/VALIDATORS/TraMLValidator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/FeatureFileOptions.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/OPTIONS/PeakFileOptions.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/Base64.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/Base64.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2Ifstream.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/Bzip2Ifstream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/Bzip2InputStream.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/Bzip2InputStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/Bzip2InputStream.cpp: In member function 'virtual XMLSize_t OpenMS::Bzip2InputStream::readBytes(XMLByte*, XMLSize_t)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/Bzip2InputStream.cpp:73:71: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 73 | XMLSize_t actual_read = (XMLSize_t) bzip2_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/AbsoluteQuantitationMethodFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 38%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/CompressedInputSource.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/CompressedInputSource.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/CachedMzML.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/CachedMzML.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/CVMappingFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/CVMappingFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/CsvFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/CsvFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ChromeleonFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ChromeleonFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DTA2DFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DTA2DFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/DTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/DTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ControlledVocabulary.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ControlledVocabulary.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/FASTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FASTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/EDTAFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/EDTAFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/EDTAFile.cpp: In member function 'void OpenMS::EDTAFile::load(const OpenMS::String&, OpenMS::ConsensusMap&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/EDTAFile.cpp:162:43: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 162 | consensus_map.getColumnHeaders()[0] = desc; | ^~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/EDTAFile.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:123:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 123 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/EDTAFile.cpp:282:45: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 282 | consensus_map.getColumnHeaders()[i] = fd; | ^~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/EDTAFile.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/EDTAFile.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:123:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 123 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 40%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ConsensusXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ConsensusXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ExperimentalDesignFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ExperimentalDesignFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipIfstream.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/GzipIfstream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/GzipInputStream.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/GzipInputStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/GzipInputStream.cpp: In member function 'virtual XMLSize_t OpenMS::GzipInputStream::readBytes(XMLByte*, XMLSize_t)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/GzipInputStream.cpp:74:70: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 74 | XMLSize_t actual_read = (XMLSize_t) gzip_->read((char *)fill_it, static_cast(max_to_read)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/FileTypes.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileTypes.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/HDF5Connector.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/HDF5Connector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/FeatureXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FeatureXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/IBSpectraFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/IBSpectraFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 42%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/FileHandler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:42: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:478:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 478 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp: In member function 'bool OpenMS::FileHandler::loadExperiment(const OpenMS::String&, OpenMS::PeakMap&, OpenMS::FileTypes::Type, OpenMS::ProgressLogger::LogType, bool, bool)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:573:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 573 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:583:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 583 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:593:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 593 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:602:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 602 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp: In member function 'void OpenMS::FileHandler::storeExperiment(const OpenMS::String&, const PeakMap&, OpenMS::ProgressLogger::LogType)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:672:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 672 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:681:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 681 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:699:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 699 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:717:24: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 717 | f.getOptions() = options_; | ^~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/FileHandler.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/FileHandler.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/IdXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/IdXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectInfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/InspectInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/IndexedMzMLFileLoader.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp: In member function 'void OpenMS::IndexedMzMLFileLoader::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:60:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 60 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/LibSVMEncoder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/LibSVMEncoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/InspectOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/InspectOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/KroenikFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/KroenikFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MS2File.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MS2File.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeaturePickerFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MSNumpressCoder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MSNumpressCoder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MSPFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 43%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MRMFeatureQCFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MRMFeatureQCFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotInfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MascotInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MSstatsFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MSstatsFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MSPGenericFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MSPGenericFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotGenericFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MascotGenericFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MsInspectFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MsInspectFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotRemoteQuery.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MascotRemoteQuery.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MascotXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MascotXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzDataFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzDataFile.cpp In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:42, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzDataFile.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: In member function 'void OpenMS::Internal::MzDataHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h:98:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 98 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:38, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzDataFile.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzDataFile.cpp: In member function 'void OpenMS::MzDataFile::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzDataFile.cpp:65:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 65 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzDataFile.h:38, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzDataFile.cpp:36: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzIdentMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzIdentMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzMLFile.cpp: In member function 'void OpenMS::MzMLFile::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzMLFile.cpp:71:16: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 71 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzMLFile.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzMLFile.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzQuantMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzQuantMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzXMLFile.cpp:37: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: In member function 'void OpenMS::Internal::MzXMLHandler::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h:103:20: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 103 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzXMLFile.cpp: In member function 'void OpenMS::MzXMLFile::setOptions(const OpenMS::PeakFileOptions&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzXMLFile.cpp:64:18: warning: implicitly-declared 'OpenMS::PeakFileOptions& OpenMS::PeakFileOptions::operator=(const OpenMS::PeakFileOptions&)' is deprecated [-Wdeprecated-copy] 64 | options_ = options; | ^~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/MzXMLFile.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzXMLFile.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h:53:5: note: because 'OpenMS::PeakFileOptions' has user-provided 'OpenMS::PeakFileOptions::PeakFileOptions(const OpenMS::PeakFileOptions&)' 53 | PeakFileOptions(const PeakFileOptions &); | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSACSVFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/OMSSACSVFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/OSWFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/OSWFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/OMSSAXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/OMSSAXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PTMXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PTMXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ParamXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ParamXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PeakTypeEstimator.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PeakTypeEstimator.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoInfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PepNovoInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PepNovoOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PepNovoOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTabFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzTabFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 45%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/MzTab.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/MzTab.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFileMascot.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PepXMLFileMascot.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ProtXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ProtXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 47%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PepXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PepXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/PercolatorOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/PercolatorOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/QcMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/QcMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SpecArrayFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SpecArrayFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestInfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SequestInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SqliteConnector.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SqliteConnector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SVOutStream.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SVOutStream.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SqMassFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SqMassFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SequestOutfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SequestOutfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/TextFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/TextFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ToolDescriptionFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'constexpr _Tp* std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolDescription; _Args = {OpenMS::Internal::ToolDescription&}]': /usr/include/c++/10/bits/stl_uninitialized.h:91:3: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/10/bits/stl_uninitialized.h:150:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/10/bits/stl_uninitialized.h:325:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/10/bits/vector.tcc:245:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: warning: implicitly-declared 'OpenMS::Internal::ToolDescriptionInternal::ToolDescriptionInternal(const OpenMS::Internal::ToolDescriptionInternal&)' is deprecated [-Wdeprecated-copy] 122 | struct OPENMS_DLLAPI ToolDescription : | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:99:32: note: because 'OpenMS::Internal::ToolDescriptionInternal' has user-provided 'OpenMS::Internal::ToolDescriptionInternal& OpenMS::Internal::ToolDescriptionInternal::operator=(const OpenMS::Internal::ToolDescriptionInternal&)' 99 | ToolDescriptionInternal& operator=(const ToolDescriptionInternal& rhs); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/stl_tempbuf.h:60, from /usr/include/c++/10/bits/stl_algo.h:62, from /usr/include/c++/10/algorithm:62, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /usr/include/c++/10/bits/stl_construct.h:113:14: note: synthesized method 'OpenMS::Internal::ToolDescription::ToolDescription(const OpenMS::Internal::ToolDescription&)' first required here 113 | return ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: In instantiation of 'constexpr _Tp* std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Args = {const OpenMS::Internal::ToolExternalDetails&}]': /usr/include/c++/10/bits/stl_uninitialized.h:91:3: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; bool _TrivialValueTypes = false]' /usr/include/c++/10/bits/stl_uninitialized.h:150:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*]' /usr/include/c++/10/bits/stl_uninitialized.h:325:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = OpenMS::Internal::ToolExternalDetails*; _Tp = OpenMS::Internal::ToolExternalDetails]' /usr/include/c++/10/bits/stl_vector.h:555:31: required from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolExternalDetails; _Alloc = std::allocator]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:122:26: required from 'constexpr _Tp* std::_Construct(_Tp*, _Args&& ...) [with _Tp = OpenMS::Internal::ToolDescription; _Args = {OpenMS::Internal::ToolDescription&}]' /usr/include/c++/10/bits/stl_uninitialized.h:91:3: required from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; bool _TrivialValueTypes = false]' /usr/include/c++/10/bits/stl_uninitialized.h:150:15: required from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*]' /usr/include/c++/10/bits/stl_uninitialized.h:325:37: required from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, std::allocator<_Tp>&) [with _InputIterator = OpenMS::Internal::ToolDescription*; _ForwardIterator = OpenMS::Internal::ToolDescription*; _Tp = OpenMS::Internal::ToolDescription]' /usr/include/c++/10/bits/vector.tcc:245:35: required from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = OpenMS::Internal::ToolDescription; _Alloc = std::allocator]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:55:39: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:106:26: warning: implicitly-declared 'OpenMS::Internal::MappingParam::MappingParam(const OpenMS::Internal::MappingParam&)' is deprecated [-Wdeprecated-copy] 106 | struct OPENMS_DLLAPI ToolExternalDetails | ^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:41, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h:72:35: note: because 'OpenMS::Internal::MappingParam' has user-provided 'OpenMS::Internal::MappingParam& OpenMS::Internal::MappingParam::operator=(const OpenMS::Internal::MappingParam&)' 72 | OPENMS_DLLAPI MappingParam& operator=(const MappingParam& rhs); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/stl_tempbuf.h:60, from /usr/include/c++/10/bits/stl_algo.h:62, from /usr/include/c++/10/algorithm:62, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/DATASTRUCTURES/String.h:40, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/XMLFile.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h:37, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ToolDescriptionFile.cpp:35: /usr/include/c++/10/bits/stl_construct.h:113:14: note: synthesized method 'OpenMS::Internal::ToolExternalDetails::ToolExternalDetails(const OpenMS::Internal::ToolExternalDetails&)' first required here 113 | return ::new(static_cast(__p)) _Tp(std::forward<_Args>(__args)...); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/TraMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/TraMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/TransformationXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/TransformationXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/UnimodXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/UnimodXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/XMassFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/XMassFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 49%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/SwathFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/SwathFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/XMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/XMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/ZlibCompression.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/ZlibCompression.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/XTandemXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/XTandemInfile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/XTandemInfile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/FORMAT/XQuestResultXMLFile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/FORMAT/XQuestResultXMLFile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp: In member function 'void OpenMS::IsobaricChannelExtractor::registerChannelsInOutputMap_(OpenMS::ConsensusMap&)': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:751:49: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 751 | consensus_map.getColumnHeaders()[index] = channel_as_map; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp:43: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:123:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 123 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 50%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 52%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SimpleSVM.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/SVM/SVMWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 54%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp: In member function 'void OpenMS::FeatureGroupingAlgorithm::transferSubelements(const std::vector&, OpenMS::ConsensusMap&) const': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:93:52: warning: implicitly-declared 'OpenMS::ConsensusMap::ColumnHeader& OpenMS::ConsensusMap::ColumnHeader::operator=(const OpenMS::ConsensusMap::ColumnHeader&)' is deprecated [-Wdeprecated-copy] 93 | out.getColumnHeaders()[counter] = desc_it->second; | ^~~~~~ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h:39, from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/KERNEL/ConsensusMap.h:123:7: note: because 'OpenMS::ConsensusMap::ColumnHeader' has user-provided 'OpenMS::ConsensusMap::ColumnHeader::ColumnHeader(const OpenMS::ConsensusMap::ColumnHeader&)' 123 | ColumnHeader(const ColumnHeader&); | ^~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 56%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp: In member function 'OpenMS::TransformationDescription::TransformationStatistics OpenMS::TransformationDescription::getStatistics() const': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:219:31: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 219 | if (data_.empty()) return s; | ^ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:260:12: warning: implicitly-declared 'OpenMS::TransformationDescription::TransformationStatistics::TransformationStatistics(const OpenMS::TransformationDescription::TransformationStatistics&)' is deprecated [-Wdeprecated-copy] 260 | return s; | ^ In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h:73:33: note: because 'OpenMS::TransformationDescription::TransformationStatistics' has user-provided 'OpenMS::TransformationDescription::TransformationStatistics& OpenMS::TransformationDescription::TransformationStatistics::operator=(const OpenMS::TransformationDescription::TransformationStatistics&)' 73 | TransformationStatistics& operator=(const TransformationStatistics& rhs) | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 57%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' In file included from /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp:35: /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: In instantiation of 'bool seqan::_spawnConsumeChar(const seqan::Pattern >&, seqan::PatternAuxData&, seqan::Spawn&, seqan::AAcid) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >; seqan::AAcid = seqan::SimpleType]': /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:913:33: required from 'bool seqan::find(TFinder&, const seqan::Pattern >&, seqan::PatternAuxData&) [with TFinder = seqan::Finder, seqan::Alloc<> > >; TNeedle = seqan::StringSet, seqan::Alloc<> > >]' /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:1039:49: required from here /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:773:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 773 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:793:24: warning: implicitly-declared 'constexpr seqan::Spawn, seqan::Alloc<> > > >::Spawn(const seqan::Spawn, seqan::Alloc<> > > >&)' is deprecated [-Wdeprecated-copy] 793 | Spawn spawn2 = spawn; // a potential spawn | ^~~~~~ /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h:238:14: note: because 'seqan::Spawn, seqan::Alloc<> > > >' has user-provided 'seqan::Spawn& seqan::Spawn::operator=(const seqan::Spawn&) [with TNeedle = seqan::StringSet, seqan::Alloc<> > >]' 238 | Spawn& operator=(const Spawn&); | ^~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 59%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/AScore.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/AScore.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[3]: *** Deleting file 'src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 63%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' c++: internal compiler error: Segmentation fault signal terminated program cc1plus Please submit a full bug report, with preprocessed source if appropriate. See for instructions. make[3]: *** [src/openms/CMakeFiles/OpenMS.dir/build.make:5435: src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSScheduler.cpp.o] Error 4 make[3]: *** Waiting for unfinished jobs.... make[3]: *** Deleting file 'src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 63%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' c++: internal compiler error: Segmentation fault signal terminated program cc1plus Please submit a full bug report, with preprocessed source if appropriate. See for instructions. make[3]: *** [src/openms/CMakeFiles/OpenMS.dir/build.make:5409: src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FalseDiscoveryRate.cpp.o] Error 4 make[3]: *** Deleting file 'src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o' make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 61%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' c++: internal compiler error: Segmentation fault signal terminated program cc1plus Please submit a full bug report, with preprocessed source if appropriate. See for instructions. make[3]: *** [src/openms/CMakeFiles/OpenMS.dir/build.make:5266: src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp.o] Error 4 make[3]: Entering directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' [ 63%] Building CXX object src/openms/CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o cd /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/OpenMS_autogen/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/include -I/builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openms/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/evergreen/src -isystem /usr/include/libsvm -isystem /usr/include/eigen3 -isystem /usr/include/WildMagic -isystem /usr/include/xercesc -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/build/src/openswathalgo/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/include -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openswathalgo/thirdparty/MIToolbox/src -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/eol-bspline -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/IsoSpec -isystem /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/thirdparty/json -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wno-cpp -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -Wall -Wextra -Wno-non-virtual-dtor -Wno-unknown-pragmas -Wno-long-long -Wno-unused-function -Wno-variadic-macros -fPIC -fopenmp -o CMakeFiles/OpenMS.dir/source/ANALYSIS/ID/FIAMSDataProcessor.cpp.o -c /builddir/build/BUILD/OpenMS-Release2.5.0/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp make[3]: Leaving directory '/builddir/build/BUILD/OpenMS-Release2.5.0/build' make[2]: *** [CMakeFiles/Makefile2:844: src/openms/CMakeFiles/OpenMS.dir/all] Error 2 make[1]: *** [CMakeFiles/Makefile2:851: src/openms/CMakeFiles/OpenMS.dir/rule] Error 2 make: *** [Makefile:204: OpenMS] Error 2 error: Bad exit status from /var/tmp/rpm-tmp.5dHXNX (%build) RPM build errors: Bad exit status from /var/tmp/rpm-tmp.5dHXNX (%build) Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.8/site-packages/mockbuild/trace_decorator.py", line 95, in trace result = func(*args, **kw) File "/usr/lib/python3.8/site-packages/mockbuild/util.py", line 746, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/openms.spec