Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/moose.spec'], chrootPath='/var/lib/mock/f33-build-140543-42487/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/moose.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1580256000 Wrote: /builddir/build/SRPMS/moose-3.1.4-10.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/moose.spec'], chrootPath='/var/lib/mock/f33-build-140543-42487/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/moose.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1580256000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.5I2sqB + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf moose-core-3.1.4 + /usr/bin/gzip -dc /builddir/build/SOURCES/moose-core-3.1.4.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd moose-core-3.1.4 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch + /usr/bin/cat /builddir/build/SOURCES/0001-Avoid-open-coded-strdup-that-cause-compilation-failu.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch + /usr/bin/cat /builddir/build/SOURCES/0002-Avoid-open-coded-strdup-that-causes-a-warning.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch + /usr/bin/cat /builddir/build/SOURCES/0003-Use-sys.executable-to-execute-test.-It-breaks-on-pyt.patch + /usr/bin/cat /builddir/build/SOURCES/0004-Do-not-try-to-access-position-1-in-string.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch + /usr/bin/cat /builddir/build/SOURCES/137e348313436782f8cf5eccc8e707ebbdc07170.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.XTguLC + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + cmake_opts=(-DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_C_FLAGS="-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection" -DCMAKE_CXX_FLAGS="-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection" -DCMAKE_EXE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DCMAKE_MODULE_LINKER_FLAGS="$LDFLAGS -Wl,--build-id" -DVERSION_MOOSE=3.1.4 -DCMAKE_BUILD_TYPE="Release|RelWithDebugInfo" -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3) + mkdir -p build + pushd build ~/build/BUILD/moose-core-3.1.4/build ~/build/BUILD/moose-core-3.1.4 + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON .. -DBUILD_SHARED_LIBS:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=ON '-DCMAKE_C_FLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' '-DCMAKE_CXX_FLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' '-DCMAKE_EXE_LINKER_FLAGS= -Wl,--build-id' '-DCMAKE_MODULE_LINKER_FLAGS= -Wl,--build-id' -DVERSION_MOOSE=3.1.4 '-DCMAKE_BUILD_TYPE=Release|RelWithDebugInfo' -DCMAKE_INSTALL_DO_STRIP=0 -DPYTHON_EXECUTABLE=/usr/bin/python3 -- The C compiler identification is GNU 10.0.1 -- The CXX compiler identification is GNU 10.0.1 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:11 (cmake_policy): The OLD behavior for policy CMP0050 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success -- Performing Test COMPILER_SUPPORTS_CXX0X -- Performing Test COMPILER_SUPPORTS_CXX0X - Success -- Performing Test COMPILER_WARNS_STRICT_ALIASING -- Performing Test COMPILER_WARNS_STRICT_ALIASING - Success -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN -- Performing Test COMPILER_SUPPORT_UNUSED_BUT_SET_VARIABLE_NO_WARN - Success -- Your compiler supports c++11 features. Enabling it -- Found PkgConfig: /usr/bin/pkg-config (found version "1.6.3") -- Couldn't fetch version from git repo -- MOOSE Version 3.1.4 -- | Writing 3.1.4 to /builddir/build/BUILD/moose-core-3.1.4/python/VERSION -- Operating system: Linux -- Building for Release/No unit tests. -- GSL version : 2.5 -- Found GSL /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so -- HDF5: Using hdf5 compiler wrapper to determine CXX configuration -- Found HDF5: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so (found version "1.10.5") found components: CXX HL -- MOOSE will use following HDF5 /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so -- Using gsl libraries: /usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so -- Shared libs: /usr/lib64/libhdf5_cpp.so;/usr/lib64/libhdf5.so;/usr/lib64/libsz.so;/usr/lib64/libz.so;/usr/lib64/libdl.so;/usr/lib64/libm.so;/usr/lib64/libhdf5_hl_cpp.so;/usr/lib64/libhdf5_hl.so;/usr/lib64/libgsl.so;/usr/lib64/libgslcblas.so -- Found PythonInterp: /usr/bin/python3 (found version "3.8.2") -- Python so extension .so -- DEBUG: Python_ADDITIONAL_VERSIONS 2.6 2.7 -- Found NumPy: version "1.17.4" /usr/lib64/python3.8/site-packages/numpy/core/include -- Python include flags: -I/usr/include/python3.8 -I/usr/include/python3.8 -- Platform: Linux-5.5.0-0.rc5.git0.1.1.riscv64.fc32.riscv64-riscv64-with-glibc2.27 -- binary distribution file /builddir/build/BUILD/moose-core-3.1.4/build/bdist/pymoose-3.1.4.CMAKE.tar.gz ======================================= If cmake did not report any error, run 'make' to build MOOSE ======================================= -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/moose-core-3.1.4/build + /usr/bin/make -O -j4 V=1 VERBOSE=1 VERBOSE=1 /usr/bin/cmake -S/builddir/build/BUILD/moose-core-3.1.4 -B/builddir/build/BUILD/moose-core-3.1.4/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/depend /usr/bin/make -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/depend /usr/bin/make -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/depend /usr/bin/make -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/msg /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/msg /builddir/build/BUILD/moose-core-3.1.4/build/msg/CMakeFiles/msg.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/msg/CMakeFiles/msg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/msg/CMakeFiles/msg.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/msg/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/msg/CMakeFiles/msg.dir/depend.internal". Scanning dependencies of target msg make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f msg/CMakeFiles/msg.dir/build.make msg/CMakeFiles/msg.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/external/muparser /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser/CMakeFiles/muparser.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/external/muparser/CMakeFiles/muparser.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/external/muparser/CMakeFiles/muparser.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/external/muparser/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/external/muparser/CMakeFiles/muparser.dir/depend.internal". Scanning dependencies of target muparser make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f external/muparser/CMakeFiles/muparser.dir/build.make external/muparser/CMakeFiles/muparser.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/intfire /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/intfire /builddir/build/BUILD/moose-core-3.1.4/build/intfire/CMakeFiles/intfire.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/intfire/CMakeFiles/intfire.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/intfire/CMakeFiles/intfire.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/intfire/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/intfire/CMakeFiles/intfire.dir/depend.internal". Scanning dependencies of target intfire make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f intfire/CMakeFiles/intfire.dir/build.make intfire/CMakeFiles/intfire.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/basecode /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/basecode /builddir/build/BUILD/moose-core-3.1.4/build/basecode/CMakeFiles/basecode.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/basecode/CMakeFiles/basecode.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/basecode/CMakeFiles/basecode.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/basecode/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/basecode/CMakeFiles/basecode.dir/depend.internal". Scanning dependencies of target basecode make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f basecode/CMakeFiles/basecode.dir/build.make basecode/CMakeFiles/basecode.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 1%] Building CXX object basecode/CMakeFiles/basecode.dir/consts.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/consts.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/consts.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParser.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -Wno-switch -Wno-unknown-pragmas -o CMakeFiles/muparser.dir/src/muParser.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/external/muparser/src/muParser.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 1%] Building CXX object intfire/CMakeFiles/intfire.dir/AdExIF.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/intfire && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/intfire/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/AdExIF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/AdExIF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 0%] Building CXX object msg/CMakeFiles/msg.dir/Msg.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/msg && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/msg/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/msg.dir/Msg.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/msg/Msg.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 1%] Building CXX object basecode/CMakeFiles/basecode.dir/Element.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/Element.cpp.o -c 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-Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/AdThreshIF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/AdThreshIF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/DataElement.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/DataElement.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/DataElement.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 3%] Building CXX object msg/CMakeFiles/msg.dir/DiagonalMsg.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/msg && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/msg/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/msg.dir/DiagonalMsg.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/msg/DiagonalMsg.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 1%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -Wno-switch -Wno-unknown-pragmas -o CMakeFiles/muparser.dir/src/muParserBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/external/muparser/src/muParserBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 4%] Building CXX object basecode/CMakeFiles/basecode.dir/GlobalDataElement.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o -c 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-Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/ExIF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/ExIF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 5%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -Wno-switch -Wno-unknown-pragmas -o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/external/muparser/src/muParserBytecode.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 6%] Building CXX object basecode/CMakeFiles/basecode.dir/LocalDataElement.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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external/muparser/CMakeFiles/muparser.dir/src/muParserCallback.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -Wno-switch -Wno-unknown-pragmas -o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/external/muparser/src/muParserCallback.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 7%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserDLL.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -Wno-switch -Wno-unknown-pragmas -o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/external/muparser/src/muParserDLL.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 4%] Building CXX object msg/CMakeFiles/msg.dir/OneToAllMsg.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/msg && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/msg/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/msg.dir/OneToAllMsg.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/msg/OneToAllMsg.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 7%] Building CXX object basecode/CMakeFiles/basecode.dir/Eref.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/Eref.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/Eref.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 8%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserError.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall 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-I/builddir/build/BUILD/moose-core-3.1.4/intfire/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/IntFireBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/IntFireBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 9%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserInt.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE 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Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 9%] Building CXX object basecode/CMakeFiles/basecode.dir/Finfo.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable 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-std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/msg.dir/SingleMsg.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/msg/SingleMsg.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 9%] Building CXX object intfire/CMakeFiles/intfire.dir/IzhIF.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/intfire && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/intfire/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/IzhIF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/IzhIF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 11%] Building CXX object basecode/CMakeFiles/basecode.dir/DestFinfo.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/DestFinfo.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/DestFinfo.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 11%] Building CXX object intfire/CMakeFiles/intfire.dir/LIF.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/intfire && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/intfire/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/LIF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/LIF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 10%] Building CXX object external/muparser/CMakeFiles/muparser.dir/src/muParserTest.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../msg -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/./include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -Wno-switch -Wno-unknown-pragmas -o CMakeFiles/muparser.dir/src/muParserTest.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/external/muparser/src/muParserTest.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 12%] Building CXX object intfire/CMakeFiles/intfire.dir/QIF.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/intfire && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/intfire/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/QIF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/QIF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 11%] Building CXX object basecode/CMakeFiles/basecode.dir/Cinfo.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/Cinfo.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/Cinfo.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 12%] Building CXX object intfire/CMakeFiles/intfire.dir/testIntFire.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/intfire && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/intfire/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/intfire.dir/testIntFire.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/intfire/testIntFire.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SrcFinfo.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/SrcFinfo.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/SrcFinfo.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 13%] Linking CXX static library libintfire.a cd /builddir/build/BUILD/moose-core-3.1.4/build/intfire && /usr/bin/cmake -P CMakeFiles/intfire.dir/cmake_clean_target.cmake cd 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-Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/ValueFinfo.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/ValueFinfo.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 13%] Linking CXX static library libmuparser.a cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/cmake -P CMakeFiles/muparser.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/external/muparser && /usr/bin/cmake -E cmake_link_script CMakeFiles/muparser.dir/link.txt --verbose=1 /usr/bin/ar qc libmuparser.a CMakeFiles/muparser.dir/src/muParser.cpp.o CMakeFiles/muparser.dir/src/muParserBase.cpp.o CMakeFiles/muparser.dir/src/muParserBytecode.cpp.o CMakeFiles/muparser.dir/src/muParserCallback.cpp.o CMakeFiles/muparser.dir/src/muParserDLL.cpp.o CMakeFiles/muparser.dir/src/muParserError.cpp.o CMakeFiles/muparser.dir/src/muParserInt.cpp.o CMakeFiles/muparser.dir/src/muParserTest.cpp.o CMakeFiles/muparser.dir/src/muParserTokenReader.cpp.o /usr/bin/ranlib libmuparser.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 14%] Built target muparser make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f shell/CMakeFiles/shell.dir/build.make shell/CMakeFiles/shell.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/shell /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/shell 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Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/shell/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/shell/CMakeFiles/shell.dir/depend.internal". 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-std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/msg.dir/SparseMsg.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/msg/SparseMsg.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 13%] Building CXX object basecode/CMakeFiles/basecode.dir/SharedFinfo.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/SharedFinfo.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/SharedFinfo.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 15%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/FieldElementFinfo.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 15%] Building CXX object basecode/CMakeFiles/basecode.dir/FieldElement.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 16%] Building CXX object basecode/CMakeFiles/basecode.dir/Id.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/Id.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/Id.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 16%] Building CXX object shell/CMakeFiles/shell.dir/ShellCopy.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/shell && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/shell/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/shell/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 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Scanning dependencies of target randnum make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f randnum/CMakeFiles/randnum.dir/build.make randnum/CMakeFiles/randnum.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 17%] Building CXX object basecode/CMakeFiles/basecode.dir/ObjId.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables 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-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/global.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/global.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /builddir/build/BUILD/moose-core-3.1.4/basecode/global.cpp: In function 'bool moose::createParentDirs(const string&)': /builddir/build/BUILD/moose-core-3.1.4/basecode/global.cpp:155:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 155 | system( command.c_str() ); | ~~~~~~^~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 16%] Building CXX object msg/CMakeFiles/msg.dir/testMsg.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/msg && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/msg/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/msg.dir/testMsg.cpp.o -c 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target msg make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 19%] Building CXX object basecode/CMakeFiles/basecode.dir/SetGet.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing 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cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/scheduling /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/scheduling /builddir/build/BUILD/moose-core-3.1.4/build/scheduling/CMakeFiles/scheduling.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/scheduling/CMakeFiles/scheduling.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/scheduling/CMakeFiles/scheduling.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/scheduling/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/scheduling/CMakeFiles/scheduling.dir/depend.internal". Scanning dependencies of target scheduling make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f scheduling/CMakeFiles/scheduling.dir/build.make scheduling/CMakeFiles/scheduling.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 20%] Building CXX object randnum/CMakeFiles/randnum.dir/Exponential.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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-I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/EpFunc.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/EpFunc.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 21%] Building CXX object basecode/CMakeFiles/basecode.dir/HopFunc.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" 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basecode/CMakeFiles/basecode.dir/SparseMatrix.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/basecode/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/SparseMatrix.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/SparseMatrix.cpp make[2]: Leaving directory 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/basecode.dir/doubleEq.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/doubleEq.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 20%] Building CXX object randnum/CMakeFiles/randnum.dir/ExponentialRng.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security 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24%] Building CXX object randnum/CMakeFiles/randnum.dir/GammaRng.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/randnum.dir/GammaRng.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/randnum/GammaRng.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 24%] Building CXX object randnum/CMakeFiles/randnum.dir/Normal.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable 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-I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/scheduling/../msg -I/builddir/build/BUILD/moose-core-3.1.4/scheduling/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/scheduling.dir/Clock.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/scheduling/Clock.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 24%] Building CXX object scheduling/CMakeFiles/scheduling.dir/testScheduling.cpp.o cd 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make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 25%] Linking CXX static library libscheduling.a cd /builddir/build/BUILD/moose-core-3.1.4/build/scheduling && /usr/bin/cmake -P CMakeFiles/scheduling.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/scheduling && /usr/bin/cmake -E cmake_link_script CMakeFiles/scheduling.dir/link.txt --verbose=1 /usr/bin/ar qc libscheduling.a CMakeFiles/scheduling.dir/Clock.cpp.o CMakeFiles/scheduling.dir/testScheduling.cpp.o /usr/bin/ranlib libscheduling.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 25%] Built target scheduling make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 24%] Building CXX object randnum/CMakeFiles/randnum.dir/NormalRng.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/randnum.dir/NormalRng.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/randnum/NormalRng.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 26%] Building CXX object randnum/CMakeFiles/randnum.dir/Poisson.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/randnum.dir/PoissonRng.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/randnum/PoissonRng.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 27%] Linking CXX static library libbasecode.a cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/cmake -P CMakeFiles/basecode.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/basecode && /usr/bin/cmake -E cmake_link_script CMakeFiles/basecode.dir/link.txt --verbose=1 /usr/bin/ar qc libbasecode.a CMakeFiles/basecode.dir/consts.cpp.o CMakeFiles/basecode.dir/Element.cpp.o CMakeFiles/basecode.dir/DataElement.cpp.o CMakeFiles/basecode.dir/GlobalDataElement.cpp.o CMakeFiles/basecode.dir/LocalDataElement.cpp.o CMakeFiles/basecode.dir/Eref.cpp.o CMakeFiles/basecode.dir/Finfo.cpp.o CMakeFiles/basecode.dir/DestFinfo.cpp.o CMakeFiles/basecode.dir/Cinfo.cpp.o CMakeFiles/basecode.dir/SrcFinfo.cpp.o CMakeFiles/basecode.dir/ValueFinfo.cpp.o CMakeFiles/basecode.dir/SharedFinfo.cpp.o CMakeFiles/basecode.dir/FieldElementFinfo.cpp.o CMakeFiles/basecode.dir/FieldElement.cpp.o CMakeFiles/basecode.dir/Id.cpp.o CMakeFiles/basecode.dir/ObjId.cpp.o CMakeFiles/basecode.dir/global.cpp.o CMakeFiles/basecode.dir/SetGet.cpp.o CMakeFiles/basecode.dir/OpFuncBase.cpp.o CMakeFiles/basecode.dir/EpFunc.cpp.o CMakeFiles/basecode.dir/HopFunc.cpp.o CMakeFiles/basecode.dir/SparseMatrix.cpp.o CMakeFiles/basecode.dir/doubleEq.cpp.o CMakeFiles/basecode.dir/testAsync.cpp.o /usr/bin/ranlib libbasecode.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 28%] Built target basecode make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/Probability.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG 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-grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/shell.dir/Neutral.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/shell/Neutral.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 27%] Building CXX object shell/CMakeFiles/shell.dir/Wildcard.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/shell && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/shell/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/shell/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/shell.dir/Wildcard.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/shell/Wildcard.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 28%] Building CXX object randnum/CMakeFiles/randnum.dir/Uniform.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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included from /usr/include/sys/time.h:21, from /builddir/build/BUILD/moose-core-3.1.4/randnum/mt19937ar.cpp:49: /usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /usr/bin/make -f biophysics/CMakeFiles/biophysics.dir/build.make biophysics/CMakeFiles/biophysics.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/biophysics /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/biophysics /builddir/build/BUILD/moose-core-3.1.4/build/biophysics/CMakeFiles/biophysics.dir/DependInfo.cmake --color= Dependee 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Scanning dependencies of target moose_builtins make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f builtins/CMakeFiles/moose_builtins.dir/build.make builtins/CMakeFiles/moose_builtins.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 29%] Building CXX object randnum/CMakeFiles/randnum.dir/UniformRng.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/randnum && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/randnum/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 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-fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Group.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Group.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 29%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Arith.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Arith.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Arith.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 28%] Building CXX object shell/CMakeFiles/shell.dir/testShell.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/shell && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/shell/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/shell/../msg -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/shell.dir/testShell.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/shell/testShell.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 32%] Building CXX object biophysics/CMakeFiles/biophysics.dir/RandSpike.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/RandSpike.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/RandSpike.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 32%] Linking CXX static library libshell.a cd /builddir/build/BUILD/moose-core-3.1.4/build/shell && /usr/bin/cmake -P CMakeFiles/shell.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/shell && /usr/bin/cmake -E cmake_link_script CMakeFiles/shell.dir/link.txt --verbose=1 /usr/bin/ar qc libshell.a CMakeFiles/shell.dir/Shell.cpp.o CMakeFiles/shell.dir/ShellCopy.cpp.o CMakeFiles/shell.dir/ShellThreads.cpp.o CMakeFiles/shell.dir/LoadModels.cpp.o CMakeFiles/shell.dir/SaveModels.cpp.o CMakeFiles/shell.dir/Neutral.cpp.o CMakeFiles/shell.dir/Wildcard.cpp.o CMakeFiles/shell.dir/testShell.cpp.o /usr/bin/ranlib libshell.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 32%] Built target shell make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 32%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SpikeGen.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/SpikeGen.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/SpikeGen.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 34%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" 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CMakeFiles/biophysics.dir/CompartmentDataHolder.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/CompartmentDataHolder.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 32%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Mstring.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Mstring.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Mstring.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 34%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Variable.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Variable.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Variable.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f utility/CMakeFiles/utility.dir/build.make utility/CMakeFiles/utility.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 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Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/utility/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/utility/CMakeFiles/utility.dir/depend.internal". Scanning dependencies of target utility make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f utility/CMakeFiles/utility.dir/build.make utility/CMakeFiles/utility.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 34%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CompartmentBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/CompartmentBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/CompartmentBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 35%] Building CXX object utility/CMakeFiles/utility.dir/strutil.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/utility/../msg -I/builddir/build/BUILD/moose-core-3.1.4/utility/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/utility.dir/strutil.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/utility/strutil.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 35%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Compartment.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/Compartment.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/Compartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 35%] Building CXX object utility/CMakeFiles/utility.dir/types.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/utility/../msg -I/builddir/build/BUILD/moose-core-3.1.4/utility/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/utility.dir/types.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/utility/types.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 32%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Func.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Func.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Func.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/mesh /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/mesh /builddir/build/BUILD/moose-core-3.1.4/build/mesh/CMakeFiles/mesh.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/mesh/CMakeFiles/mesh.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/mesh/CMakeFiles/mesh.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/mesh/CMakeFiles/mesh.dir/depend.internal". Scanning dependencies of target mesh make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f mesh/CMakeFiles/mesh.dir/build.make mesh/CMakeFiles/mesh.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 37%] Building CXX object utility/CMakeFiles/utility.dir/setupenv.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/utility/../msg -I/builddir/build/BUILD/moose-core-3.1.4/utility/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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-I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Function.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Function.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 37%] Building CXX object utility/CMakeFiles/utility.dir/numutil.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 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biophysics/CMakeFiles/biophysics.dir/SymCompartment.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/SymCompartment.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/SymCompartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 38%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/InputVariable.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/InputVariable.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/GapJunction.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/GapJunction.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/GapJunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 38%] Building CXX object utility/CMakeFiles/utility.dir/Annotator.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/utility/../msg -I/builddir/build/BUILD/moose-core-3.1.4/utility/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/utility.dir/Vec.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/utility/Vec.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 37%] Building CXX object mesh/CMakeFiles/mesh.dir/ChemCompt.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/ChemCompt.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/ChemCompt.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 39%] Building CXX object utility/CMakeFiles/utility.dir/cnpy.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/utility/../msg -I/builddir/build/BUILD/moose-core-3.1.4/utility/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/utility.dir/cnpy.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/utility/cnpy.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /builddir/build/BUILD/moose-core-3.1.4/utility/cnpy.cpp: In function 'bool cnpy2::is_valid_numpy_file(FILE*)': /builddir/build/BUILD/moose-core-3.1.4/utility/cnpy.cpp:88:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 88 | fread( buffer, sizeof(char), __pre__size__, fp ); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 41%] Linking CXX static library libutility.a cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/cmake -P CMakeFiles/utility.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/utility && /usr/bin/cmake -E cmake_link_script CMakeFiles/utility.dir/link.txt --verbose=1 /usr/bin/ar qc libutility.a CMakeFiles/utility.dir/strutil.cpp.o CMakeFiles/utility.dir/types.cpp.o CMakeFiles/utility.dir/setupenv.cpp.o CMakeFiles/utility.dir/numutil.cpp.o CMakeFiles/utility.dir/Annotator.cpp.o CMakeFiles/utility.dir/Vec.cpp.o CMakeFiles/utility.dir/cnpy.cpp.o /usr/bin/ranlib libutility.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 41%] Built target utility make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 38%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/ChanBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/ChanBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 40%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshCompt.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 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'/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 38%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TableBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/TableBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/TableBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ChanCommon.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/ChanCommon.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/ChanCommon.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 42%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/HHChannel.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/HHChannel.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 41%] Building CXX object mesh/CMakeFiles/mesh.dir/MeshEntry.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/MeshEntry.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/MeshEntry.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 42%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Table.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Table.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Table.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 43%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannelBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/HHChannelBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/HHChannelBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 45%] Building CXX object mesh/CMakeFiles/mesh.dir/CylBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/CylBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/CylBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/mpi /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/mpi /builddir/build/BUILD/moose-core-3.1.4/build/mpi/CMakeFiles/moose_mpi.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/mpi/CMakeFiles/moose_mpi.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/mpi/CMakeFiles/moose_mpi.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/mpi/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/mpi/CMakeFiles/moose_mpi.dir/depend.internal". Scanning dependencies of target moose_mpi make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f mpi/CMakeFiles/moose_mpi.dir/build.make mpi/CMakeFiles/moose_mpi.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 42%] Building CXX object mesh/CMakeFiles/mesh.dir/CubeMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/CubeMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/CubeMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 44%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Interpol.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Interpol.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 43%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHChannel2D.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL 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/builddir/build/BUILD/moose-core-3.1.4/biophysics/HHChannel2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 45%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/PostMaster.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mpi && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mpi/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mpi/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_mpi.dir/PostMaster.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mpi/PostMaster.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 46%] Building CXX object mpi/CMakeFiles/moose_mpi.dir/testMpi.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mpi && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mpi/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mpi/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_mpi.dir/testMpi.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mpi/testMpi.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 46%] Linking CXX static library libmoose_mpi.a cd /builddir/build/BUILD/moose-core-3.1.4/build/mpi && /usr/bin/cmake -P CMakeFiles/moose_mpi.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/mpi && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_mpi.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_mpi.a CMakeFiles/moose_mpi.dir/PostMaster.cpp.o CMakeFiles/moose_mpi.dir/testMpi.cpp.o /usr/bin/ranlib libmoose_mpi.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 46%] Built target moose_mpi make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 45%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/StimulusTable.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 45%] Building CXX object mesh/CMakeFiles/mesh.dir/CylMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/CylMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/CylMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 45%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/HHGate.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/HHGate.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 48%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroNode.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/NeuroNode.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/NeuroNode.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 47%] Building CXX object biophysics/CMakeFiles/biophysics.dir/HHGate2D.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/HHGate2D.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/HHGate2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 47%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/TimeTable.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/TimeTable.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 49%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/StreamerBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 49%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineEntry.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/SpineEntry.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/SpineEntry.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 49%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConcBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/CaConcBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/CaConcBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 50%] Building CXX object biophysics/CMakeFiles/biophysics.dir/CaConc.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/CaConc.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/CaConc.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 51%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MgBlock.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MgBlock.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MgBlock.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 51%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Stats.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Stats.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Stats.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 49%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Streamer.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Streamer.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Streamer.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 51%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Nernst.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/Nernst.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/Nernst.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 48%] Building CXX object mesh/CMakeFiles/mesh.dir/NeuroMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/NeuroMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/NeuroMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 52%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/Interpol2D.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 53%] Building CXX object mesh/CMakeFiles/mesh.dir/SpineMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/SpineMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/SpineMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 53%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadCell.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/ReadCell.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/ReadCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 54%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SwcSegment.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/SwcSegment.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/SwcSegment.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 53%] Building CXX object mesh/CMakeFiles/mesh.dir/PsdMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/PsdMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/PsdMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 55%] Building CXX object mesh/CMakeFiles/mesh.dir/testMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../msg -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/mesh/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/mesh.dir/testMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/mesh/testMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 52%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Neuron.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/Neuron.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/Neuron.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 56%] Linking CXX static library libmesh.a cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/cmake -P CMakeFiles/mesh.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mesh.dir/link.txt --verbose=1 /usr/bin/ar qc libmesh.a CMakeFiles/mesh.dir/ChemCompt.cpp.o CMakeFiles/mesh.dir/MeshCompt.cpp.o CMakeFiles/mesh.dir/MeshEntry.cpp.o CMakeFiles/mesh.dir/CubeMesh.cpp.o CMakeFiles/mesh.dir/CylBase.cpp.o CMakeFiles/mesh.dir/CylMesh.cpp.o CMakeFiles/mesh.dir/NeuroNode.cpp.o CMakeFiles/mesh.dir/NeuroMesh.cpp.o CMakeFiles/mesh.dir/SpineEntry.cpp.o CMakeFiles/mesh.dir/SpineMesh.cpp.o CMakeFiles/mesh.dir/PsdMesh.cpp.o CMakeFiles/mesh.dir/testMesh.cpp.o /usr/bin/ranlib libmesh.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 56%] Built target mesh make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 56%] Building CXX object biophysics/CMakeFiles/biophysics.dir/ReadSwc.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/ReadSwc.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/ReadSwc.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 53%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/HDF5WriterBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /builddir/build/BUILD/moose-core-3.1.4/builtins/HDF5WriterBase.cpp: In function 'hid_t require_group(hid_t, std::string)': /builddir/build/BUILD/moose-core-3.1.4/builtins/HDF5WriterBase.cpp:87:24: warning: 'current' may be used uninitialized in this function [-Wmaybe-uninitialized] 87 | hid_t prev = file, current; | ^~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 56%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/HDF5DataWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 56%] Building CXX object biophysics/CMakeFiles/biophysics.dir/SynChan.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/SynChan.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/SynChan.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 57%] Building CXX object biophysics/CMakeFiles/biophysics.dir/testBiophysics.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/testBiophysics.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/testBiophysics.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 56%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/NSDFWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/signeur /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/signeur /builddir/build/BUILD/moose-core-3.1.4/build/signeur/CMakeFiles/signeur.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/signeur/CMakeFiles/signeur.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/signeur/CMakeFiles/signeur.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/signeur/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/signeur/CMakeFiles/signeur.dir/depend.internal". Scanning dependencies of target signeur make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f signeur/CMakeFiles/signeur.dir/build.make signeur/CMakeFiles/signeur.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 57%] Building CXX object biophysics/CMakeFiles/biophysics.dir/NMDAChan.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/NMDAChan.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/NMDAChan.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 59%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/SpikeStats.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object signeur/CMakeFiles/signeur.dir/Adaptor.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/signeur && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/signeur/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/signeur/../utility -I/builddir/build/BUILD/moose-core-3.1.4/signeur/../kinetics -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/signeur.dir/Adaptor.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/signeur/Adaptor.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object signeur/CMakeFiles/signeur.dir/testSigNeur.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/signeur && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/signeur/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/signeur/../utility -I/builddir/build/BUILD/moose-core-3.1.4/signeur/../kinetics -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/signeur.dir/testSigNeur.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/signeur/testSigNeur.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Linking CXX static library libsigneur.a cd /builddir/build/BUILD/moose-core-3.1.4/build/signeur && /usr/bin/cmake -P CMakeFiles/signeur.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/signeur && /usr/bin/cmake -E cmake_link_script CMakeFiles/signeur.dir/link.txt --verbose=1 /usr/bin/ar qc libsigneur.a CMakeFiles/signeur.dir/Adaptor.cpp.o CMakeFiles/signeur.dir/testSigNeur.cpp.o /usr/bin/ranlib libsigneur.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Built target signeur make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 58%] Building CXX object biophysics/CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/IzhikevichNrn.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Leakage.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/Leakage.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/Leakage.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/ksolve /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/ksolve /builddir/build/BUILD/moose-core-3.1.4/build/ksolve/CMakeFiles/ksolve.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/ksolve/CMakeFiles/ksolve.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/ksolve/CMakeFiles/ksolve.dir/depend.internal". 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Scanning dependencies of target ksolve make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f ksolve/CMakeFiles/ksolve.dir/build.make ksolve/CMakeFiles/ksolve.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testNSDF.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/testNSDF.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object builtins/CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/external/muparser/include -I/builddir/build/BUILD/moose-core-3.1.4/scheduling -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/builtins/testBuiltins.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object ksolve/CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/KinSparseMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/hsolve /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/hsolve /builddir/build/BUILD/moose-core-3.1.4/build/hsolve/CMakeFiles/hsolve.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/hsolve/CMakeFiles/hsolve.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/hsolve/CMakeFiles/hsolve.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/hsolve/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/hsolve/CMakeFiles/hsolve.dir/depend.internal". Scanning dependencies of target hsolve make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f hsolve/CMakeFiles/hsolve.dir/build.make hsolve/CMakeFiles/hsolve.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 61%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePool.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/ZombiePool.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/ZombiePool.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 63%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveStruct.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 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/builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolveStruct.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 62%] Linking CXX static library libmoose_builtins.a cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/cmake -P CMakeFiles/moose_builtins.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/builtins && /usr/bin/cmake -E cmake_link_script CMakeFiles/moose_builtins.dir/link.txt --verbose=1 /usr/bin/ar qc libmoose_builtins.a CMakeFiles/moose_builtins.dir/Arith.cpp.o CMakeFiles/moose_builtins.dir/Group.cpp.o CMakeFiles/moose_builtins.dir/Mstring.cpp.o CMakeFiles/moose_builtins.dir/Func.cpp.o CMakeFiles/moose_builtins.dir/Function.cpp.o CMakeFiles/moose_builtins.dir/Variable.cpp.o CMakeFiles/moose_builtins.dir/InputVariable.cpp.o CMakeFiles/moose_builtins.dir/TableBase.cpp.o CMakeFiles/moose_builtins.dir/Table.cpp.o CMakeFiles/moose_builtins.dir/Interpol.cpp.o CMakeFiles/moose_builtins.dir/StimulusTable.cpp.o CMakeFiles/moose_builtins.dir/TimeTable.cpp.o CMakeFiles/moose_builtins.dir/StreamerBase.cpp.o CMakeFiles/moose_builtins.dir/Streamer.cpp.o CMakeFiles/moose_builtins.dir/Stats.cpp.o CMakeFiles/moose_builtins.dir/Interpol2D.cpp.o CMakeFiles/moose_builtins.dir/HDF5WriterBase.cpp.o CMakeFiles/moose_builtins.dir/NSDFWriter.cpp.o CMakeFiles/moose_builtins.dir/HDF5DataWriter.cpp.o CMakeFiles/moose_builtins.dir/SpikeStats.cpp.o CMakeFiles/moose_builtins.dir/testBuiltins.cpp.o CMakeFiles/moose_builtins.dir/testNSDF.cpp.o /usr/bin/ranlib libmoose_builtins.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 63%] Built target moose_builtins make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 60%] Building CXX object biophysics/CMakeFiles/biophysics.dir/DifShell.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/DifShell.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/DifShell.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 63%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/ZombieBufPool.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 63%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieFunction.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/ZombieFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 63%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HinesMatrix.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/HinesMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 65%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieReac.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/ZombieReac.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/ZombieReac.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 64%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VectorTable.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/VectorTable.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/VectorTable.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 66%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolvePassive.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolvePassive.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 66%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieEnz.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/ZombieEnz.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 66%] Building CXX object hsolve/CMakeFiles/hsolve.dir/RateLookup.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER 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'/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 66%] Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/ZombieMMenz.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 66%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActive.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg 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64%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovRateTable.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/diffusion /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/diffusion /builddir/build/BUILD/moose-core-3.1.4/build/diffusion/CMakeFiles/diffusion.dir/DependInfo.cmake --color= Dependee 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Scanning dependencies of target diffusion make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f diffusion/CMakeFiles/diffusion.dir/build.make diffusion/CMakeFiles/diffusion.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 67%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/VoxelPoolsBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 68%] Building CXX object diffusion/CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/diffusion && /usr/bin/c++ 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directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 68%] Building CXX object ksolve/CMakeFiles/ksolve.dir/VoxelPools.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/VoxelPools.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/VoxelPools.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 66%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovChannel.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovChannel.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 68%] Building CXX object diffusion/CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/diffusion && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../utility -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../ksolve -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/diffusion/DiffPoolVec.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 68%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolveActiveSetup.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 70%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MatrixOps.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MatrixOps.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MatrixOps.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /builddir/build/BUILD/moose-core-3.1.4/biophysics/MatrixOps.cpp: In function 'void matMatAdd(Matrix*, Matrix*, double, double, unsigned int)': /builddir/build/BUILD/moose-core-3.1.4/biophysics/MatrixOps.cpp:128:10: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized] 128 | Matrix *C; | ^ make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 69%] Building CXX object ksolve/CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/GssaVoxelPools.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 71%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveInterface.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolveInterface.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 71%] Building CXX object ksolve/CMakeFiles/ksolve.dir/RateTerm.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/RateTerm.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/RateTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 72%] Building CXX object ksolve/CMakeFiles/ksolve.dir/FuncTerm.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/FuncTerm.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/FuncTerm.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 71%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovSolverBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 71%] Building CXX object diffusion/CMakeFiles/diffusion.dir/Dsolve.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/diffusion && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../utility -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../ksolve -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/diffusion.dir/Dsolve.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/diffusion/Dsolve.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovSolver.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovSolver.cpp: In member function 'Matrix* MarkovSolver::computePadeApproximant(Matrix*, unsigned int)': /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovSolver.cpp:88:10: warning: 'padeCoeffs' may be used uninitialized in this function [-Wmaybe-uninitialized] 88 | double *padeCoeffs; | ^~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 72%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolve.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/HSolve.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolve.cpp /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolve.cpp: In member function 'void HSolve::zombify(Eref) const': /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolve.cpp:218:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 218 | for ( i = compartmentId_.begin(); i != compartmentId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolve.cpp:222:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 222 | temp.clear(); | ^~~~ /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolve.cpp:226:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 226 | for ( i = caConcId_.begin(); i != caConcId_.end(); ++i ) | ^~~ /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolve.cpp:229:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 229 | temp.clear(); | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Building CXX object biophysics/CMakeFiles/biophysics.dir/VClamp.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/VClamp.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/VClamp.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Building CXX object diffusion/CMakeFiles/diffusion.dir/testDiffusion.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/diffusion && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../utility -I/builddir/build/BUILD/moose-core-3.1.4/diffusion/../ksolve -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/diffusion.dir/testDiffusion.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/diffusion/testDiffusion.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Building CXX object hsolve/CMakeFiles/hsolve.dir/HSolveUtils.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/HSolveUtils.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Linking CXX static library libdiffusion.a cd /builddir/build/BUILD/moose-core-3.1.4/build/diffusion && /usr/bin/cmake -P CMakeFiles/diffusion.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/diffusion.dir/link.txt --verbose=1 /usr/bin/ar qc libdiffusion.a CMakeFiles/diffusion.dir/FastMatrixElim.cpp.o CMakeFiles/diffusion.dir/DiffPoolVec.cpp.o CMakeFiles/diffusion.dir/Dsolve.cpp.o CMakeFiles/diffusion.dir/testDiffusion.cpp.o /usr/bin/ranlib libdiffusion.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Built target diffusion make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Building CXX object hsolve/CMakeFiles/hsolve.dir/testHSolve.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/testHSolve.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/testHSolve.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 75%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/ZombieCompartment.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 74%] Building CXX object biophysics/CMakeFiles/biophysics.dir/Spine.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/Spine.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/Spine.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 73%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Stoich.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/Stoich.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/Stoich.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/device /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/device /builddir/build/BUILD/moose-core-3.1.4/build/device/CMakeFiles/device.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/device/CMakeFiles/device.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/device/CMakeFiles/device.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/device/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/device/CMakeFiles/device.dir/depend.internal". Scanning dependencies of target device make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f device/CMakeFiles/device.dir/build.make device/CMakeFiles/device.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 76%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/ZombieCaConc.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 77%] Building CXX object hsolve/CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/hsolve/../external/debug -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/hsolve/ZombieHHChannel.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 77%] Linking CXX static library libhsolve.a cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/cmake -P CMakeFiles/hsolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/hsolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/hsolve.dir/link.txt --verbose=1 /usr/bin/ar qc libhsolve.a CMakeFiles/hsolve.dir/HSolveStruct.cpp.o CMakeFiles/hsolve.dir/HinesMatrix.cpp.o CMakeFiles/hsolve.dir/HSolvePassive.cpp.o CMakeFiles/hsolve.dir/RateLookup.cpp.o CMakeFiles/hsolve.dir/HSolveActive.cpp.o CMakeFiles/hsolve.dir/HSolveActiveSetup.cpp.o CMakeFiles/hsolve.dir/HSolveInterface.cpp.o CMakeFiles/hsolve.dir/HSolve.cpp.o CMakeFiles/hsolve.dir/HSolveUtils.cpp.o CMakeFiles/hsolve.dir/testHSolve.cpp.o CMakeFiles/hsolve.dir/ZombieCompartment.cpp.o CMakeFiles/hsolve.dir/ZombieCaConc.cpp.o CMakeFiles/hsolve.dir/ZombieHHChannel.cpp.o /usr/bin/ranlib libhsolve.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 77%] Built target hsolve make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 76%] Building CXX object biophysics/CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../synapse -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../utility -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/.. -I/builddir/build/BUILD/moose-core-3.1.4/biophysics/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/biophysics/MarkovGslSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 76%] Building CXX object device/CMakeFiles/device.dir/PulseGen.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/device && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/device/../msg -I/builddir/build/BUILD/moose-core-3.1.4/device/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/device.dir/PulseGen.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/device/PulseGen.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 77%] Linking CXX static library libbiophysics.a cd /builddir/build/BUILD/moose-core-3.1.4/build/biophysics && /usr/bin/cmake -P 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CMakeFiles/biophysics.dir/MgBlock.cpp.o CMakeFiles/biophysics.dir/Nernst.cpp.o CMakeFiles/biophysics.dir/Neuron.cpp.o CMakeFiles/biophysics.dir/ReadCell.cpp.o CMakeFiles/biophysics.dir/SwcSegment.cpp.o CMakeFiles/biophysics.dir/ReadSwc.cpp.o CMakeFiles/biophysics.dir/SynChan.cpp.o CMakeFiles/biophysics.dir/NMDAChan.cpp.o CMakeFiles/biophysics.dir/testBiophysics.cpp.o CMakeFiles/biophysics.dir/IzhikevichNrn.cpp.o CMakeFiles/biophysics.dir/DifShell.cpp.o CMakeFiles/biophysics.dir/Leakage.cpp.o CMakeFiles/biophysics.dir/VectorTable.cpp.o CMakeFiles/biophysics.dir/MarkovRateTable.cpp.o CMakeFiles/biophysics.dir/MarkovChannel.cpp.o CMakeFiles/biophysics.dir/MatrixOps.cpp.o CMakeFiles/biophysics.dir/MarkovSolverBase.cpp.o CMakeFiles/biophysics.dir/MarkovSolver.cpp.o CMakeFiles/biophysics.dir/VClamp.cpp.o CMakeFiles/biophysics.dir/Spine.cpp.o CMakeFiles/biophysics.dir/MarkovGslSolver.cpp.o /usr/bin/ranlib libbiophysics.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 78%] Built target biophysics make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 77%] Building CXX object device/CMakeFiles/device.dir/DiffAmp.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/device && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/device/../msg -I/builddir/build/BUILD/moose-core-3.1.4/device/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/device.dir/DiffAmp.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/device/DiffAmp.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 76%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Ksolve.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode 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Building CXX object ksolve/CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 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Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/kinetics/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/kinetics/CMakeFiles/kinetics.dir/depend.internal". Scanning dependencies of target kinetics make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f kinetics/CMakeFiles/kinetics.dir/build.make kinetics/CMakeFiles/kinetics.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 79%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/benchmarks.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/benchmarks && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/benchmarks/../msg -I/builddir/build/BUILD/moose-core-3.1.4/benchmarks/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/benchmarks.dir/benchmarks.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/benchmarks/benchmarks.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 81%] Building CXX object benchmarks/CMakeFiles/benchmarks.dir/kineticMarks.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/benchmarks && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/benchmarks/../msg -I/builddir/build/BUILD/moose-core-3.1.4/benchmarks/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/benchmarks/kineticMarks.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 81%] Linking CXX static library libbenchmarks.a cd /builddir/build/BUILD/moose-core-3.1.4/build/benchmarks && /usr/bin/cmake -P CMakeFiles/benchmarks.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/benchmarks && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmarks.dir/link.txt --verbose=1 /usr/bin/ar qc libbenchmarks.a CMakeFiles/benchmarks.dir/benchmarks.cpp.o CMakeFiles/benchmarks.dir/kineticMarks.cpp.o /usr/bin/ranlib libbenchmarks.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 81%] Built target benchmarks make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 79%] Building CXX object device/CMakeFiles/device.dir/RC.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/device && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/device/../msg -I/builddir/build/BUILD/moose-core-3.1.4/device/../basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/device.dir/RC.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/device/RC.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 82%] Linking CXX static library libdevice.a cd /builddir/build/BUILD/moose-core-3.1.4/build/device && /usr/bin/cmake -P CMakeFiles/device.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/device && /usr/bin/cmake -E cmake_link_script CMakeFiles/device.dir/link.txt --verbose=1 /usr/bin/ar qc libdevice.a CMakeFiles/device.dir/PulseGen.cpp.o CMakeFiles/device.dir/DiffAmp.cpp.o CMakeFiles/device.dir/PIDController.cpp.o CMakeFiles/device.dir/RC.cpp.o /usr/bin/ranlib libdevice.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 82%] Built target device make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 81%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Pool.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/Pool.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/Pool.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 83%] Building CXX object kinetics/CMakeFiles/kinetics.dir/BufPool.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/BufPool.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/BufPool.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/synapse /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/synapse /builddir/build/BUILD/moose-core-3.1.4/build/synapse/CMakeFiles/synapse.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/synapse/CMakeFiles/synapse.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/synapse/CMakeFiles/synapse.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/synapse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/synapse/CMakeFiles/synapse.dir/depend.internal". Scanning dependencies of target synapse make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f synapse/CMakeFiles/synapse.dir/build.make synapse/CMakeFiles/synapse.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 80%] Building CXX object kinetics/CMakeFiles/kinetics.dir/PoolBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/PoolBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/PoolBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 78%] Building CXX object ksolve/CMakeFiles/ksolve.dir/Gsolve.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/Gsolve.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/Gsolve.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 84%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Reac.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/Reac.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/Reac.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 84%] Building CXX object synapse/CMakeFiles/synapse.dir/RollingMatrix.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/RollingMatrix.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/RollingMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 83%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReacBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/ReacBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/ReacBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 84%] Building CXX object synapse/CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/GraupnerBrunel2012CaPlasticitySynHandler.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 85%] Building CXX object kinetics/CMakeFiles/kinetics.dir/EnzBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/EnzBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/EnzBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 84%] Building CXX object ksolve/CMakeFiles/ksolve.dir/testKsolve.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/testKsolve.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/testKsolve.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 86%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynHandler.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/STDPSynHandler.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 86%] Building CXX object kinetics/CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/CplxEnzBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 86%] Building CXX object synapse/CMakeFiles/synapse.dir/STDPSynapse.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/STDPSynapse.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/STDPSynapse.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 88%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Enz.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/Enz.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/Enz.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 88%] Building CXX object kinetics/CMakeFiles/kinetics.dir/MMenz.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/MMenz.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/MMenz.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 88%] Building CXX object kinetics/CMakeFiles/kinetics.dir/Species.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/Species.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/Species.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 89%] Building CXX object synapse/CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/SimpleSynHandler.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 87%] Building CXX object synapse/CMakeFiles/synapse.dir/SeqSynHandler.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/SeqSynHandler.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 90%] Building CXX object synapse/CMakeFiles/synapse.dir/SynHandlerBase.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/SynHandlerBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 87%] Building CXX object ksolve/CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../builtins -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../utility -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/.. -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../mesh -I/builddir/build/BUILD/moose-core-3.1.4/ksolve/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/ksolve/SteadyStateGsl.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 91%] Building CXX object synapse/CMakeFiles/synapse.dir/Synapse.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/Synapse.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/Synapse.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 91%] Building CXX object synapse/CMakeFiles/synapse.dir/testSynapse.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../utility -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../kinetics -I/builddir/build/BUILD/moose-core-3.1.4/synapse/../external/muparser/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/synapse.dir/testSynapse.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/synapse/testSynapse.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 91%] Linking CXX static library libsynapse.a cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/cmake -P CMakeFiles/synapse.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/synapse && /usr/bin/cmake -E cmake_link_script CMakeFiles/synapse.dir/link.txt --verbose=1 /usr/bin/ar qc libsynapse.a CMakeFiles/synapse.dir/GraupnerBrunel2012CaPlasticitySynHandler.cpp.o CMakeFiles/synapse.dir/RollingMatrix.cpp.o CMakeFiles/synapse.dir/STDPSynHandler.cpp.o CMakeFiles/synapse.dir/STDPSynapse.cpp.o CMakeFiles/synapse.dir/SeqSynHandler.cpp.o CMakeFiles/synapse.dir/SimpleSynHandler.cpp.o CMakeFiles/synapse.dir/SynHandlerBase.cpp.o CMakeFiles/synapse.dir/Synapse.cpp.o CMakeFiles/synapse.dir/testSynapse.cpp.o /usr/bin/ranlib libsynapse.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 91%] Built target synapse make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 91%] Linking CXX static library libksolve.a cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/cmake -P CMakeFiles/ksolve.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/ksolve && /usr/bin/cmake -E cmake_link_script CMakeFiles/ksolve.dir/link.txt --verbose=1 /usr/bin/ar qc libksolve.a CMakeFiles/ksolve.dir/KinSparseMatrix.cpp.o CMakeFiles/ksolve.dir/ZombiePool.cpp.o CMakeFiles/ksolve.dir/ZombieFunction.cpp.o CMakeFiles/ksolve.dir/ZombieBufPool.cpp.o CMakeFiles/ksolve.dir/ZombieReac.cpp.o CMakeFiles/ksolve.dir/ZombieEnz.cpp.o CMakeFiles/ksolve.dir/ZombieMMenz.cpp.o CMakeFiles/ksolve.dir/VoxelPoolsBase.cpp.o CMakeFiles/ksolve.dir/VoxelPools.cpp.o CMakeFiles/ksolve.dir/GssaVoxelPools.cpp.o CMakeFiles/ksolve.dir/RateTerm.cpp.o CMakeFiles/ksolve.dir/FuncTerm.cpp.o CMakeFiles/ksolve.dir/Stoich.cpp.o CMakeFiles/ksolve.dir/Ksolve.cpp.o CMakeFiles/ksolve.dir/Gsolve.cpp.o CMakeFiles/ksolve.dir/ZombiePoolInterface.cpp.o CMakeFiles/ksolve.dir/testKsolve.cpp.o CMakeFiles/ksolve.dir/SteadyStateGsl.cpp.o /usr/bin/ranlib libksolve.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 92%] Built target ksolve make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/lookupVolumeFromMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadCspace.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/ReadCspace.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/ReadCspace.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 90%] Building CXX object kinetics/CMakeFiles/kinetics.dir/ReadKkit.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/ReadKkit.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/ReadKkit.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 92%] Building CXX object kinetics/CMakeFiles/kinetics.dir/testKinetics.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/testKinetics.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/testKinetics.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 91%] Building CXX object kinetics/CMakeFiles/kinetics.dir/WriteKkit.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../msg -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/kinetics/../utility -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/kinetics.dir/WriteKkit.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/kinetics/WriteKkit.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /builddir/build/BUILD/moose-core-3.1.4/kinetics/WriteKkit.cpp: In function 'void writePlot(std::ofstream&, Id, std::string, std::string, double, double)': /builddir/build/BUILD/moose-core-3.1.4/kinetics/WriteKkit.cpp:281:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 281 | if ( pos == string::npos ) | ^~ /builddir/build/BUILD/moose-core-3.1.4/kinetics/WriteKkit.cpp:283:3: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 283 | if ( pos == string::npos ) | ^~ make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 93%] Linking CXX static library libkinetics.a cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/cmake -P CMakeFiles/kinetics.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/moose-core-3.1.4/build/kinetics && /usr/bin/cmake -E cmake_link_script CMakeFiles/kinetics.dir/link.txt --verbose=1 /usr/bin/ar qc libkinetics.a CMakeFiles/kinetics.dir/PoolBase.cpp.o CMakeFiles/kinetics.dir/Pool.cpp.o CMakeFiles/kinetics.dir/BufPool.cpp.o CMakeFiles/kinetics.dir/ReacBase.cpp.o CMakeFiles/kinetics.dir/Reac.cpp.o CMakeFiles/kinetics.dir/EnzBase.cpp.o CMakeFiles/kinetics.dir/CplxEnzBase.cpp.o CMakeFiles/kinetics.dir/Enz.cpp.o CMakeFiles/kinetics.dir/MMenz.cpp.o CMakeFiles/kinetics.dir/Species.cpp.o CMakeFiles/kinetics.dir/ReadKkit.cpp.o CMakeFiles/kinetics.dir/WriteKkit.cpp.o CMakeFiles/kinetics.dir/ReadCspace.cpp.o CMakeFiles/kinetics.dir/lookupVolumeFromMesh.cpp.o CMakeFiles/kinetics.dir/testKinetics.cpp.o /usr/bin/ranlib libkinetics.a make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 93%] Built target kinetics make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/depend /usr/bin/make -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/libmoose.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/libmoose.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/libmoose.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/libmoose.dir/depend.internal". Scanning dependencies of target libmoose make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/libmoose.dir/build.make CMakeFiles/libmoose.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/pymoose /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/pymoose /builddir/build/BUILD/moose-core-3.1.4/build/pymoose/CMakeFiles/_moose.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/pymoose/CMakeFiles/_moose.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/pymoose/CMakeFiles/_moose.dir/depend.internal". 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Scanning dependencies of target _moose make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f pymoose/CMakeFiles/_moose.dir/build.make pymoose/CMakeFiles/_moose.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 94%] Building CXX object CMakeFiles/libmoose.dir/basecode/main.cpp.o /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_LIB -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -Dlibmoose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/libmoose.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/main.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Linking CXX shared library libmoose.so /usr/bin/cmake -E cmake_link_script CMakeFiles/libmoose.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -shared -Wl,-soname,libmoose.so -o libmoose.so CMakeFiles/libmoose.dir/basecode/main.cpp.o -L/builddir/build/BUILD/moose-core-3.1.4/build -Wl,--whole-archive external/muparser/libmuparser.a builtins/libmoose_builtins.a msg/libmsg.a benchmarks/libbenchmarks.a shell/libshell.a randnum/librandnum.a scheduling/libscheduling.a mpi/libmoose_mpi.a biophysics/libbiophysics.a utility/libutility.a kinetics/libkinetics.a synapse/libsynapse.a intfire/libintfire.a hsolve/libhsolve.a mesh/libmesh.a signeur/libsigneur.a diffusion/libdiffusion.a ksolve/libksolve.a device/libdevice.a basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/ld: builtins/libmoose_builtins.a(testNSDF.cpp.o): in function `testCreateStringDataset()': /builddir/build/BUILD/moose-core-3.1.4/builtins/testNSDF.cpp:76: warning: the use of `tmpnam' is dangerous, better use `mkstemp' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Built target libmoose make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/pymooseinit.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/pymooseinit.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/pymooseinit.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/moose.bin.dir/DependInfo.cmake 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Scanning dependencies of target moose.bin make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/moose.bin.dir/build.make CMakeFiles/moose.bin.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 94%] Building CXX object pymoose/CMakeFiles/_moose.dir/moosemodule.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/moosemodule.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/moosemodule.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Building CXX object CMakeFiles/moose.bin.dir/basecode/main.cpp.o /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -o CMakeFiles/moose.bin.dir/basecode/main.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/basecode/main.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 96%] Linking CXX executable moose.bin /usr/bin/cmake -E cmake_link_script CMakeFiles/moose.bin.dir/link.txt --verbose=1 /usr/bin/c++ -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wl,--build-id -rdynamic CMakeFiles/moose.bin.dir/basecode/main.cpp.o -o moose.bin -L/builddir/build/BUILD/moose-core-3.1.4/build -lmoose -ldl make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 96%] Built target moose.bin make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/mfield.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/mfield.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/mfield.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/vec.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/vec.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/vec.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 97%] Building CXX object pymoose/CMakeFiles/_moose.dir/test_moosemodule.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/test_moosemodule.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/test_moosemodule.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 97%] Building CXX object pymoose/CMakeFiles/_moose.dir/PyRun.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/PyRun.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/PyRun.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 95%] Building CXX object pymoose/CMakeFiles/_moose.dir/melement.cpp.o cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/c++ -DENABLE_CPP11 -DMOOSE_VERSION=\"3.1.4\" -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DPYMOOSE -DQUIET_MODE -DUSE_GENESIS_PARSER -DUSE_GSL -DUSE_HDF5 -DUSE_NUMPY -D_moose_EXPORTS -I/builddir/build/BUILD/moose-core-3.1.4 -I/builddir/build/BUILD/moose-core-3.1.4/msg -I/builddir/build/BUILD/moose-core-3.1.4/basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../basecode -I/builddir/build/BUILD/moose-core-3.1.4/pymoose/../msg -I/usr/lib64/python3.8/site-packages/numpy/core/include -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -fPIC -Wall -Wno-unused-variable -Wno-unused-function -fPIC -Wno-strict-aliasing -Wno-unused-but-set-variable -UDO_UNIT_TESTS -O3 -I/usr/include/python3.8 -I/usr/include/python3.8 -o CMakeFiles/_moose.dir/melement.cpp.o -c /builddir/build/BUILD/moose-core-3.1.4/pymoose/melement.cpp make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 98%] Linking CXX shared module ../../python/moose/_moose.so cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/cmake -E cmake_link_script CMakeFiles/_moose.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -DNDEBUG -Wl,--build-id -shared -o ../../python/moose/_moose.so CMakeFiles/_moose.dir/moosemodule.cpp.o CMakeFiles/_moose.dir/vec.cpp.o CMakeFiles/_moose.dir/mfield.cpp.o CMakeFiles/_moose.dir/pymooseinit.cpp.o CMakeFiles/_moose.dir/melement.cpp.o CMakeFiles/_moose.dir/test_moosemodule.cpp.o CMakeFiles/_moose.dir/PyRun.cpp.o -L/builddir/build/BUILD/moose-core-3.1.4/build -Wl,--whole-archive ../external/muparser/libmuparser.a ../builtins/libmoose_builtins.a ../msg/libmsg.a ../benchmarks/libbenchmarks.a ../shell/libshell.a ../randnum/librandnum.a ../scheduling/libscheduling.a ../mpi/libmoose_mpi.a ../biophysics/libbiophysics.a ../utility/libutility.a ../kinetics/libkinetics.a ../synapse/libsynapse.a ../intfire/libintfire.a ../hsolve/libhsolve.a ../mesh/libmesh.a ../signeur/libsigneur.a ../diffusion/libdiffusion.a ../ksolve/libksolve.a ../device/libdevice.a ../basecode/libbasecode.a -Wl,--no-whole-archive -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm -lhdf5_hl_cpp -lhdf5_hl -lgsl -lgslcblas cd /builddir/build/BUILD/moose-core-3.1.4/build/pymoose && /usr/bin/cmake -E cmake_echo_color --cyan "MOOSE python extention is successfully built. Now " " Run 'sudo make install' to install it. " " " "NOTE: Run 'pip uninstall moose' to uninstall moose." MOOSE python extention is successfully built. Now Run 'sudo make install' to install it. NOTE: Run 'pip uninstall moose' to uninstall moose. make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/ld: ../builtins/libmoose_builtins.a(testNSDF.cpp.o): in function `testCreateStringDataset()': /builddir/build/BUILD/moose-core-3.1.4/builtins/testNSDF.cpp:76: warning: the use of `tmpnam' is dangerous, better use `mkstemp' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 98%] Built target _moose make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/copy_pymoose.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/copy_pymoose.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/copy_pymoose.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/copy_pymoose.dir/depend.internal". Scanning dependencies of target copy_pymoose make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/copy_pymoose.dir/build.make CMakeFiles/copy_pymoose.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 99%] Copying required python files from /builddir/build/BUILD/moose-core-3.1.4/python to to build directory /usr/bin/cmake -E copy_directory /builddir/build/BUILD/moose-core-3.1.4/python /builddir/build/BUILD/moose-core-3.1.4/build/python make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [ 99%] Built target copy_pymoose make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/depend make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' cd /builddir/build/BUILD/moose-core-3.1.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4 /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/bdist.dir/DependInfo.cmake --color= Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/bdist.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/bdist.dir/depend.internal". Dependee "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles/bdist.dir/depend.internal". Scanning dependencies of target bdist make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/make -f CMakeFiles/bdist.dir/build.make CMakeFiles/bdist.dir/build make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [100%] bdist is saved to /builddir/build/BUILD/moose-core-3.1.4/build/bdist cd /builddir/build/BUILD/moose-core-3.1.4/build/python && /usr/bin/python3 setup.cmake.py bdist_dumb -p CMAKE -d /builddir/build/BUILD/moose-core-3.1.4/build/bdist Got 3.1.4 from VERSION file [INFO] Suffix is so running bdist_dumb running build running build_py creating build creating build/lib creating build/lib/rdesigneur copying rdesigneur/rdesigneurProtos.py -> build/lib/rdesigneur copying rdesigneur/rdesigneur.py -> build/lib/rdesigneur copying rdesigneur/rmoogli.py -> build/lib/rdesigneur copying rdesigneur/__init__.py -> build/lib/rdesigneur creating build/lib/moose copying moose/moose_constants.py -> build/lib/moose copying moose/print_utils.py -> build/lib/moose copying moose/recording.py -> build/lib/moose copying moose/graph_utils.py -> build/lib/moose copying moose/moose_config.py -> build/lib/moose copying moose/moose.py -> build/lib/moose copying moose/methods_utils.py -> build/lib/moose copying moose/optimizer_interface.py -> build/lib/moose copying moose/moose_test.py -> build/lib/moose copying moose/constants.py -> build/lib/moose copying moose/hdfutil.py -> build/lib/moose copying moose/utils.py -> build/lib/moose copying moose/graphutil.py -> build/lib/moose copying moose/__init__.py -> build/lib/moose copying moose/alternate.py -> build/lib/moose copying moose/merge.py -> build/lib/moose copying moose/plot_utils.py -> build/lib/moose creating build/lib/moose/SBML copying moose/SBML/validation.py -> build/lib/moose/SBML copying moose/SBML/writeSBML.py -> build/lib/moose/SBML copying moose/SBML/readSBML.py -> build/lib/moose/SBML copying moose/SBML/__init__.py -> build/lib/moose/SBML creating build/lib/moose/genesis copying moose/genesis/__init__.py -> build/lib/moose/genesis copying moose/genesis/writeKkit.py -> build/lib/moose/genesis creating build/lib/moose/neuroml copying moose/neuroml/MorphML.py -> build/lib/moose/neuroml copying moose/neuroml/ChannelML.py -> build/lib/moose/neuroml copying moose/neuroml/NetworkML.py -> build/lib/moose/neuroml copying moose/neuroml/utils.py -> build/lib/moose/neuroml copying moose/neuroml/__init__.py -> build/lib/moose/neuroml copying moose/neuroml/NeuroML.py -> build/lib/moose/neuroml creating build/lib/moose/neuroml2 copying moose/neuroml2/hhfit.py -> build/lib/moose/neuroml2 copying moose/neuroml2/test_hhfit.py -> build/lib/moose/neuroml2 copying moose/neuroml2/test_converter.py -> build/lib/moose/neuroml2 copying moose/neuroml2/test_reader.py -> build/lib/moose/neuroml2 copying moose/neuroml2/converter.py -> build/lib/moose/neuroml2 copying moose/neuroml2/reader.py -> build/lib/moose/neuroml2 copying moose/neuroml2/units.py -> build/lib/moose/neuroml2 copying moose/neuroml2/__init__.py -> build/lib/moose/neuroml2 copying moose/neuroml2/generated_neuroml.py -> build/lib/moose/neuroml2 copying moose/neuroml2/generated_neuromlsub.py -> build/lib/moose/neuroml2 creating build/lib/moose/chemUtil copying moose/chemUtil/chemConnectUtil.py -> build/lib/moose/chemUtil copying moose/chemUtil/graphUtils.py -> build/lib/moose/chemUtil copying moose/chemUtil/__init__.py -> build/lib/moose/chemUtil copying moose/chemUtil/add_Delete_ChemicalSolver.py -> build/lib/moose/chemUtil copying moose/_moose.so -> build/lib/moose installing to build/bdist.linux-riscv64/dumb running install running install_lib creating build/bdist.linux-riscv64 creating build/bdist.linux-riscv64/dumb creating build/bdist.linux-riscv64/dumb/usr creating build/bdist.linux-riscv64/dumb/usr/lib creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8 creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/chemConnectUtil.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/graphUtils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/add_Delete_ChemicalSolver.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil copying build/lib/moose/moose_constants.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/print_utils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/recording.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/graph_utils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/moose_config.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/moose.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/methods_utils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/optimizer_interface.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/moose_test.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/constants.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/hdfutil.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/utils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/graphutil.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/MorphML.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/ChannelML.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/NetworkML.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/utils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/NeuroML.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml copying build/lib/moose/_moose.so -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/validation.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/writeSBML.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/readSBML.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML copying build/lib/moose/alternate.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/hhfit.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/test_hhfit.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/test_converter.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/test_reader.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/converter.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/reader.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/units.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/generated_neuroml.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/generated_neuromlsub.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/merge.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose copying build/lib/moose/plot_utils.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/genesis copying build/lib/moose/genesis/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/genesis copying build/lib/moose/genesis/writeKkit.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/genesis creating build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/rdesigneurProtos.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/rdesigneur.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/rmoogli.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/__init__.py -> build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil/chemConnectUtil.py to chemConnectUtil.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil/graphUtils.py to graphUtils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil/__init__.py to __init__.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/chemUtil/add_Delete_ChemicalSolver.py to add_Delete_ChemicalSolver.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/moose_constants.py to moose_constants.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/print_utils.py to print_utils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/recording.py to recording.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/graph_utils.py to graph_utils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/moose_config.py to moose_config.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/moose.py to moose.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/methods_utils.py to methods_utils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/optimizer_interface.py to optimizer_interface.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/moose_test.py to moose_test.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/constants.py to constants.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/hdfutil.py to hdfutil.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/utils.py to utils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/graphutil.py to graphutil.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/__init__.py to __init__.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml/MorphML.py to MorphML.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml/ChannelML.py to ChannelML.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml/NetworkML.py to NetworkML.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml/utils.py to utils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml/__init__.py to __init__.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml/NeuroML.py to NeuroML.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML/validation.py to validation.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML/writeSBML.py to writeSBML.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML/readSBML.py to readSBML.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/SBML/__init__.py to __init__.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/alternate.py to alternate.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/hhfit.py to hhfit.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/test_hhfit.py to test_hhfit.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/test_converter.py to test_converter.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/test_reader.py to test_reader.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/converter.py to converter.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/reader.py to reader.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/units.py to units.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/__init__.py to __init__.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/generated_neuroml.py to generated_neuroml.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/neuroml2/generated_neuromlsub.py to generated_neuromlsub.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/merge.py to merge.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/plot_utils.py to plot_utils.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/genesis/__init__.py to __init__.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/moose/genesis/writeKkit.py to writeKkit.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur/rdesigneurProtos.py to rdesigneurProtos.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur/rdesigneur.py to rdesigneur.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur/rmoogli.py to rmoogli.cpython-38.pyc byte-compiling build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/rdesigneur/__init__.py to __init__.cpython-38.pyc running install_egg_info Writing build/bdist.linux-riscv64/dumb/usr/lib/python3.8/site-packages/pymoose-3.1.4-py3.8.egg-info creating /builddir/build/BUILD/moose-core-3.1.4/build/bdist Creating tar archive removing 'build/bdist.linux-riscv64/dumb' (and everything under it) make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/lib/python3.8/site-packages/moose/utils.py:100: SyntaxWarning: "is" with a literal. Did you mean "=="? make[2]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' Unarchiving bdist file /builddir/build/BUILD/moose-core-3.1.4/build/bdist/pymoose-3.1.4.CMAKE.tar.gz to /builddir/build/BUILD/moose-core-3.1.4/build/pymoose_bdist_install /usr/bin/cmake -E chdir /builddir/build/BUILD/moose-core-3.1.4/build/pymoose_bdist_install tar xvf /builddir/build/BUILD/moose-core-3.1.4/build/bdist/pymoose-3.1.4.CMAKE.tar.gz ./ ./usr/ ./usr/lib/ ./usr/lib/python3.8/ ./usr/lib/python3.8/site-packages/ ./usr/lib/python3.8/site-packages/moose/ ./usr/lib/python3.8/site-packages/moose/SBML/ ./usr/lib/python3.8/site-packages/moose/SBML/__init__.py ./usr/lib/python3.8/site-packages/moose/SBML/__pycache__/ ./usr/lib/python3.8/site-packages/moose/SBML/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/SBML/__pycache__/readSBML.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/SBML/__pycache__/validation.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/SBML/__pycache__/writeSBML.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/SBML/readSBML.py ./usr/lib/python3.8/site-packages/moose/SBML/validation.py ./usr/lib/python3.8/site-packages/moose/SBML/writeSBML.py ./usr/lib/python3.8/site-packages/moose/__init__.py ./usr/lib/python3.8/site-packages/moose/__pycache__/ ./usr/lib/python3.8/site-packages/moose/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/alternate.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/constants.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/graph_utils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/graphutil.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/hdfutil.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/merge.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/methods_utils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/moose.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/moose_config.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/moose_constants.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/moose_test.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/optimizer_interface.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/plot_utils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/print_utils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/recording.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/__pycache__/utils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/_moose.so ./usr/lib/python3.8/site-packages/moose/alternate.py ./usr/lib/python3.8/site-packages/moose/chemUtil/ ./usr/lib/python3.8/site-packages/moose/chemUtil/__init__.py ./usr/lib/python3.8/site-packages/moose/chemUtil/__pycache__/ ./usr/lib/python3.8/site-packages/moose/chemUtil/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/chemUtil/__pycache__/add_Delete_ChemicalSolver.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/chemUtil/__pycache__/chemConnectUtil.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/chemUtil/__pycache__/graphUtils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/chemUtil/add_Delete_ChemicalSolver.py ./usr/lib/python3.8/site-packages/moose/chemUtil/chemConnectUtil.py ./usr/lib/python3.8/site-packages/moose/chemUtil/graphUtils.py ./usr/lib/python3.8/site-packages/moose/constants.py ./usr/lib/python3.8/site-packages/moose/genesis/ ./usr/lib/python3.8/site-packages/moose/genesis/__init__.py ./usr/lib/python3.8/site-packages/moose/genesis/__pycache__/ ./usr/lib/python3.8/site-packages/moose/genesis/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/genesis/__pycache__/writeKkit.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/genesis/writeKkit.py ./usr/lib/python3.8/site-packages/moose/graph_utils.py ./usr/lib/python3.8/site-packages/moose/graphutil.py ./usr/lib/python3.8/site-packages/moose/hdfutil.py ./usr/lib/python3.8/site-packages/moose/merge.py ./usr/lib/python3.8/site-packages/moose/methods_utils.py ./usr/lib/python3.8/site-packages/moose/moose.py ./usr/lib/python3.8/site-packages/moose/moose_config.py ./usr/lib/python3.8/site-packages/moose/moose_constants.py ./usr/lib/python3.8/site-packages/moose/moose_test.py ./usr/lib/python3.8/site-packages/moose/neuroml/ ./usr/lib/python3.8/site-packages/moose/neuroml/ChannelML.py ./usr/lib/python3.8/site-packages/moose/neuroml/MorphML.py ./usr/lib/python3.8/site-packages/moose/neuroml/NetworkML.py ./usr/lib/python3.8/site-packages/moose/neuroml/NeuroML.py ./usr/lib/python3.8/site-packages/moose/neuroml/__init__.py ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/ ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/ChannelML.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/MorphML.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/NetworkML.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/NeuroML.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml/__pycache__/utils.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml/utils.py ./usr/lib/python3.8/site-packages/moose/neuroml2/ ./usr/lib/python3.8/site-packages/moose/neuroml2/__init__.py ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/ ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/converter.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/generated_neuroml.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/generated_neuromlsub.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/hhfit.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/reader.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/test_converter.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/test_hhfit.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/test_reader.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/__pycache__/units.cpython-38.pyc ./usr/lib/python3.8/site-packages/moose/neuroml2/converter.py ./usr/lib/python3.8/site-packages/moose/neuroml2/generated_neuroml.py ./usr/lib/python3.8/site-packages/moose/neuroml2/generated_neuromlsub.py ./usr/lib/python3.8/site-packages/moose/neuroml2/hhfit.py ./usr/lib/python3.8/site-packages/moose/neuroml2/reader.py ./usr/lib/python3.8/site-packages/moose/neuroml2/test_converter.py ./usr/lib/python3.8/site-packages/moose/neuroml2/test_hhfit.py ./usr/lib/python3.8/site-packages/moose/neuroml2/test_reader.py ./usr/lib/python3.8/site-packages/moose/neuroml2/units.py ./usr/lib/python3.8/site-packages/moose/optimizer_interface.py ./usr/lib/python3.8/site-packages/moose/plot_utils.py ./usr/lib/python3.8/site-packages/moose/print_utils.py ./usr/lib/python3.8/site-packages/moose/recording.py ./usr/lib/python3.8/site-packages/moose/utils.py ./usr/lib/python3.8/site-packages/pymoose-3.1.4-py3.8.egg-info ./usr/lib/python3.8/site-packages/rdesigneur/ ./usr/lib/python3.8/site-packages/rdesigneur/__init__.py ./usr/lib/python3.8/site-packages/rdesigneur/__pycache__/ ./usr/lib/python3.8/site-packages/rdesigneur/__pycache__/__init__.cpython-38.pyc ./usr/lib/python3.8/site-packages/rdesigneur/__pycache__/rdesigneur.cpython-38.pyc ./usr/lib/python3.8/site-packages/rdesigneur/__pycache__/rdesigneurProtos.cpython-38.pyc ./usr/lib/python3.8/site-packages/rdesigneur/__pycache__/rmoogli.cpython-38.pyc ./usr/lib/python3.8/site-packages/rdesigneur/rdesigneur.py ./usr/lib/python3.8/site-packages/rdesigneur/rdesigneurProtos.py ./usr/lib/python3.8/site-packages/rdesigneur/rmoogli.py make[2]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' make[1]: Entering directory '/builddir/build/BUILD/moose-core-3.1.4/build' [100%] Built target bdist make[1]: Leaving directory '/builddir/build/BUILD/moose-core-3.1.4/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/moose-core-3.1.4/build/CMakeFiles 0 + cd python + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.cmake.py build '--executable=/usr/bin/python3 -s' Got 3.1.4 from VERSION file [INFO] Suffix is so running build running build_py + popd ~/build/BUILD/moose-core-3.1.4 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.txnOcE + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 ++ dirname /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 + cd moose-core-3.1.4 + install -vD build/moose.bin /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/moose install: creating directory '/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr' install: creating directory '/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin' 'build/moose.bin' -> '/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/moose' + install -vDt /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/ build/libmoose.so install: creating directory '/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64' 'build/libmoose.so' -> '/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/libmoose.so' + pushd build/python ~/build/BUILD/moose-core-3.1.4/build/python ~/build/BUILD/moose-core-3.1.4 + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + /usr/bin/python3 setup.cmake.py install -O1 --skip-build --root /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 --install-lib=/usr/lib64/python3.8/site-packages Got 3.1.4 from VERSION file [INFO] Suffix is so running install running install_lib creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8 creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/chemConnectUtil.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/graphUtils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil copying build/lib/moose/chemUtil/add_Delete_ChemicalSolver.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil copying build/lib/moose/moose_constants.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/print_utils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/recording.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/graph_utils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/moose_config.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/moose.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/methods_utils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/optimizer_interface.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/moose_test.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/constants.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/hdfutil.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/utils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/graphutil.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/MorphML.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/ChannelML.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/NetworkML.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/utils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/neuroml/NeuroML.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml copying build/lib/moose/_moose.so -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/validation.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/writeSBML.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/readSBML.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML copying build/lib/moose/SBML/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML copying build/lib/moose/alternate.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/hhfit.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/test_hhfit.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/test_converter.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/test_reader.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/converter.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/reader.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/units.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/generated_neuroml.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/neuroml2/generated_neuromlsub.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2 copying build/lib/moose/merge.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose copying build/lib/moose/plot_utils.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/genesis copying build/lib/moose/genesis/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/genesis copying build/lib/moose/genesis/writeKkit.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/genesis creating /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/rdesigneurProtos.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/rdesigneur.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/rmoogli.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur copying build/lib/rdesigneur/__init__.py -> /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil/chemConnectUtil.py to chemConnectUtil.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil/graphUtils.py to graphUtils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/chemUtil/add_Delete_ChemicalSolver.py to add_Delete_ChemicalSolver.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/moose_constants.py to moose_constants.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/print_utils.py to print_utils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/recording.py to recording.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/graph_utils.py to graph_utils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/moose_config.py to moose_config.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/moose.py to moose.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/methods_utils.py to methods_utils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/optimizer_interface.py to optimizer_interface.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/moose_test.py to moose_test.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/constants.py to constants.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/hdfutil.py to hdfutil.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/utils.py to utils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/graphutil.py to graphutil.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml/MorphML.py to MorphML.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml/ChannelML.py to ChannelML.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml/NetworkML.py to NetworkML.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml/utils.py to utils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml/NeuroML.py to NeuroML.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML/validation.py to validation.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML/writeSBML.py to writeSBML.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML/readSBML.py to readSBML.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/SBML/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/alternate.py to alternate.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/hhfit.py to hhfit.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/test_hhfit.py to test_hhfit.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/test_converter.py to test_converter.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/test_reader.py to test_reader.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/converter.py to converter.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/reader.py to reader.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/units.py to units.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/generated_neuroml.py to generated_neuroml.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/neuroml2/generated_neuromlsub.py to generated_neuromlsub.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/merge.py to merge.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/plot_utils.py to plot_utils.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/genesis/__init__.py to __init__.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/genesis/writeKkit.py to writeKkit.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur/rdesigneurProtos.py to rdesigneurProtos.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur/rdesigneur.py to rdesigneur.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur/rmoogli.py to rmoogli.cpython-38.pyc byte-compiling /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/rdesigneur/__init__.py to __init__.cpython-38.pyc writing byte-compilation script '/tmp/tmptwddmfpt.py' /usr/bin/python3 /tmp/tmptwddmfpt.py /usr/lib64/python3.8/site-packages/moose/utils.py:100: SyntaxWarning: "is" with a literal. Did you mean "=="? removing /tmp/tmptwddmfpt.py running install_egg_info Writing /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/pymoose-3.1.4-py3.8.egg-info /usr/lib64/python3.8/site-packages/moose/utils.py:100: SyntaxWarning: "is" with a literal. Did you mean "=="? + rm -rfv /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/__pycache__ + chmod +x /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/_moose.so + popd ~/build/BUILD/moose-core-3.1.4 + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 3.1.4-10.fc33 --unique-debug-suffix -3.1.4-10.fc33.riscv64 --unique-debug-src-base moose-3.1.4-10.fc33.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/moose-core-3.1.4 explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/moose explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/libmoose.so explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/_moose.so extracting debug info from /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/moose extracting debug info from /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/libmoose.so extracting debug info from /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages/moose/_moose.so original debug info size: 335816kB, size after compression: 255776kB /usr/lib/rpm/sepdebugcrcfix: Updated 3 CRC32s, 0 CRC32s did match. 7742 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib/debug/usr/lib64/python3.8 using /usr/bin/python3.8 Bytecompiling .py files below /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8 using /usr/bin/python3.8 /usr/lib64/python3.8/site-packages/moose/utils.py:100: SyntaxWarning: "is" with a literal. Did you mean "=="? /usr/lib64/python3.8/site-packages/moose/utils.py:100: SyntaxWarning: "is" with a literal. Did you mean "=="? + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.6SEfsE + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + checksec --file=/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/moose RELRO STACK CANARY NX PIE RPATH RUNPATH Symbols FORTIFY Fortified Fortifiable FILE Partial RELRO Canary found NX enabled No PIE No RPATH No RUNPATH No Symbols Yes 0 1 /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/bin/moose + pushd build + ctest --output-on-failure -V -E test_streamer ~/build/BUILD/moose-core-3.1.4/build ~/build/BUILD/moose-core-3.1.4 UpdateCTestConfiguration from :/builddir/build/BUILD/moose-core-3.1.4/build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-core-3.1.4/build/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/moose-core-3.1.4/build/DartConfiguration.tcl Parse Config file:/builddir/build/BUILD/moose-core-3.1.4/build/DartConfiguration.tcl Test project /builddir/build/BUILD/moose-core-3.1.4/build Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test_function 1: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_function.py" 1: Environment variables: 1: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 1: Test timeout computed to be: 1500 1: 0 0.0 1: 1 1.1 1: 2 2.211 1: 3 3.322 1: 4 4.433 1: 5 5.5440000000000005 1/13 Test #1: test_function .................... Passed 12.16 sec test 2 Start 2: test_kkit 2: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_kkit.py" 2: Environment variables: 2: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 2: Test timeout computed to be: 1500 2: Script dir /builddir/build/BUILD/moose-core-3.1.4/tests/python 2/13 Test #2: test_kkit ........................ Passed 10.41 sec test 3 Start 3: test_ksolve 3: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_ksolve.py" 3: Environment variables: 3: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 3: Test timeout computed to be: 1500 3: Using moose from /builddir/build/BUILD/moose-core-3.1.4/build/python/moose/__init__.py 3: [INFO] Using method = rk5 3: [INFO] Time taken 0.10224604606628418 3: Test passed 3/13 Test #3: test_ksolve ...................... Passed 10.96 sec test 4 Start 4: test_moose_paths 4: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_moose_paths.py" 4: Environment variables: 4: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 4: Test timeout computed to be: 1500 4/13 Test #4: test_moose_paths ................. Passed 9.89 sec test 5 Start 5: test_neuroml 5: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_neuroml.py" 5: Environment variables: 5: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 5: Test timeout computed to be: 1500 5: /builddir/build/BUILD/moose-core-3.1.4/build/python/moose/utils.py:100: SyntaxWarning: "is" with a literal. Did you mean "=="? 5: if len(token) is 0: 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-core-3.1.4/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-core-3.1.4/tests/python/neuroml/cells_channels/CA1soma.morph.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-core-3.1.4/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Loading neuroml file /builddir/build/BUILD/moose-core-3.1.4/tests/python/neuroml/CA1soma.net.xml 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.neuroml: INFO Using default temperature of 32.0 degree Celsius 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating population CA1group of cell type CA1soma 5: moose.nml.networkml: INFO Creating input under /elec 5: moose.nml.networkml: INFO Creating input under /elec 5: For injected current 4e-13, no of spikes in 1.0 second: 10 5: For injected current 8e-13, no of spikes in 1.0 second: 20 5: For injected current 1.4e-12, no of spikes in 1.0 second: 29 5: For injected current 1.8e-12, no of spikes in 1.0 second: 34 5/13 Test #5: test_neuroml ..................... Passed 101.02 sec test 6 Start 6: test_nsdf 6: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_nsdf.py" 6: Environment variables: 6: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 6: Test timeout computed to be: 1500 6: using moose from: /builddir/build/BUILD/moose-core-3.1.4/build/python/moose/__init__.py 6: event input /model[0]/writer[0].eventInput 0 6: 6: /model[0]/writer[0]/eventInput[0] 6: 2020-03-28T21:35:55.040096 6: 2020-03-28T21:36:01.614105 6/13 Test #6: test_nsdf ........................ Passed 34.76 sec test 7 Start 7: test_pymoose 7: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_pymoose.py" 7: Environment variables: 7: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 7: Test timeout computed to be: 1500 7: ..............................0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: 0: Error: SetGet::strGet: Field Vm not found on Element z 7: .. 7: ---------------------------------------------------------------------- 7: Ran 32 tests in 0.445s 7: 7: OK 7: PyMOOSE Regression Tests: 7: Testing connect ... OK 7: Testing delete ... neutral235957925107550778781189035385385889524 neutral235957925107550778781189035385385889524/b 7: /neutral235957925107550778781189035385385889524[0] /neutral235957925107550778781189035385385889524[0]/b[0] 7: 3 3 7: neutral327897817637693530434248138151555577100 neutral327897817637693530434248138151555577100/b 7: /neutral327897817637693530434248138151555577100[0] /neutral327897817637693530434248138151555577100[0]/b[0] 7: 3 3 7: neutral25709738838330105623561881600046968366 neutral25709738838330105623561881600046968366/b 7: /neutral25709738838330105623561881600046968366[0] /neutral25709738838330105623561881600046968366[0]/b[0] 7: 3 3 7: neutral14384090546598135142586603258445420155 neutral14384090546598135142586603258445420155/b 7: /neutral14384090546598135142586603258445420155[0] /neutral14384090546598135142586603258445420155[0]/b[0] 7: 3 3 7: neutral301780932750985565636982773403082114400 neutral301780932750985565636982773403082114400/b 7: /neutral301780932750985565636982773403082114400[0] /neutral301780932750985565636982773403082114400[0]/b[0] 7: 3 3 7: neutral299128937160943425318018855054172320962 neutral299128937160943425318018855054172320962/b 7: /neutral299128937160943425318018855054172320962[0] /neutral299128937160943425318018855054172320962[0]/b[0] 7: 3 3 7: neutral188447808862562437781560565806001147739 neutral188447808862562437781560565806001147739/b 7: /neutral188447808862562437781560565806001147739[0] /neutral188447808862562437781560565806001147739[0]/b[0] 7: 3 3 7: neutral12440734109406587242377830695991116410 neutral12440734109406587242377830695991116410/b 7: /neutral12440734109406587242377830695991116410[0] /neutral12440734109406587242377830695991116410[0]/b[0] 7: 3 3 7: neutral198943071884609449109616600271890920422 neutral198943071884609449109616600271890920422/b 7: /neutral198943071884609449109616600271890920422[0] /neutral198943071884609449109616600271890920422[0]/b[0] 7: 3 3 7: neutral27016006753481187165090859171508906259 neutral27016006753481187165090859171508906259/b 7: /neutral27016006753481187165090859171508906259[0] /neutral27016006753481187165090859171508906259[0]/b[0] 7: 3 3 7: neutral163432702314065460657837018153280513339 neutral163432702314065460657837018153280513339/b 7: /neutral163432702314065460657837018153280513339[0] /neutral163432702314065460657837018153280513339[0]/b[0] 7: 3 3 7: neutral114475651586381845635986284634954530755 neutral114475651586381845635986284634954530755/b 7: /neutral114475651586381845635986284634954530755[0] /neutral114475651586381845635986284634954530755[0]/b[0] 7: 3 3 7: neutral35575470663137411428040488754346653160 neutral35575470663137411428040488754346653160/b 7: /neutral35575470663137411428040488754346653160[0] /neutral35575470663137411428040488754346653160[0]/b[0] 7: 3 3 7: neutral219789833303147342186649959598977707832 neutral219789833303147342186649959598977707832/b 7: /neutral219789833303147342186649959598977707832[0] /neutral219789833303147342186649959598977707832[0]/b[0] 7: 3 3 7: neutral170655991919647157636611109262238627420 neutral170655991919647157636611109262238627420/b 7: /neutral170655991919647157636611109262238627420[0] /neutral170655991919647157636611109262238627420[0]/b[0] 7: 3 3 7/13 Test #7: test_pymoose ..................... Passed 10.91 sec test 8 Start 8: test_pyrun 8: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_pyrun.py" 8: Environment variables: 8: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 8: Test timeout computed to be: 1500 8/13 Test #8: test_pyrun ....................... Passed 10.88 sec test 9 Start 9: test_sbml 9: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_sbml.py" 9: Environment variables: 9: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 9: Test timeout computed to be: 1500 9: line 3: (99507 [Warning]) In situations where a mathematical expression refers to extent, the units of extent should be consistent with the global extent units of the model. In models where the 'extentUnits' attribute has not been declared, libSBML does not yet have the functionality to verify accurately the consistency of the units in such expressions. 9: 9: line 29: (99508 [Warning]) In situations where a mathematical expression refers to a compartment, species or parameter, it is necessary to know the units of the object to establish unit consistency. In models where the units of an object have not been declared, libSBML does not yet have the functionality to accurately verify the consistency of the units in mathematical expressions referring to that object. 9: The units of the 'k1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (20702 [Warning]) If the attribute 'units' on a given Parameter object has not been set, then the unit of measurement associated with that parameter's value is undefined. 9: Reference: L3V1 Section 4.7.3 9: The with id 'k1' does not have a 'units' attribute. 9: 9: line 39: (99505 [Warning]) In situations where a mathematical expression contains literal numbers or parameters whose units have not been declared, it is not possible to verify accurately the consistency of the units in the expression. 9: The units of the expression 'compartment * k1 * S1' cannot be fully checked. Unit consistency reported as either no errors or further unit errors related to this object may not be accurate. 9: 9: line 29: (80701 [Warning]) As a principle of best modeling practice, the units of a should be declared rather than be left undefined. Doing so improves the ability of software to check the consistency of units and helps make it easier to detect potential errors in models. 9: The with the id 'k1' does not have a 'units' attribute. 9: 9: 9: File: /builddir/build/BUILD/moose-core-3.1.4/tests/python/./chem_models/00001-sbml-l3v1.xml (Level 3, version 1) 9: model: > 9: functionDefinitions: 0 9: unitDefinitions: 3 9: compartmentTypes: 0 9: specieTypes: 0 9: compartments: 1 9: species: 2 9: parameters: 1 9: initialAssignments: 0 9: rules: 0 9: constraints: 0 9: reactions: 1 9: events: 0 9: 9: 9: Compartment size is 1 9: 9: 9: 9: 9: 9: 9: 9/13 Test #9: test_sbml ........................ Passed 10.71 sec test 10 Start 10: test_snippets 10: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_snippets.py" 10: Environment variables: 10: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 10: Test timeout computed to be: 1500 10: Testing snippets in /builddir/build/BUILD/moose-core-3.1.4/tests/python/../../Demos/snippets 10: [INFO] Disabling all pylab/matplotlib show() functions 10/13 Test #10: test_snippets .................... Passed 1.51 sec test 11 Start 11: test_synchan 11: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_synchan.py" 11: Environment variables: 11: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 11: Test timeout computed to be: 1500 11: Using moose from /builddir/build/BUILD/moose-core-3.1.4/build/python/moose/__init__.py 11: ('Synapses:', 1, 'w=', 1.0) 11/13 Test #11: test_synchan ..................... Passed 9.77 sec test 12 Start 12: test_table_streaming_support 12: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_table_streaming_support.py" 12: Environment variables: 12: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 12: Test timeout computed to be: 1500 12: @ Sat Mar 28 21:37:14 2020: 10% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:14 2020: 20% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:14 2020: 30% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:14 2020: 40% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:14 2020: 50% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:14 2020: 60% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:14 2020: 70% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:15 2020: 80% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:15 2020: 90% of total 1000 seconds is over. 12: @ Sat Mar 28 21:37:15 2020: 100% of total 1000 seconds is over. 12: [INFO] Using moose form /builddir/build/BUILD/moose-core-3.1.4/build/python/moose/__init__.py 12: outfile : _tables/compt/a/tabA.npy useStreamer: True Path: /compt[0]/a[0]/tabA[0] 12: outfile : table2.npy useStreamer: True Path: /compt[0]/b[0]/tabB[0] 12: outfile : tablec.csv useStreamer: True Path: /compt[0]/c[0]/tabC[0] 12: Starting moose for 1000 12: MOOSE is done 12: [(3.27854e-318, 1. ) (1.00000e+000, 0.92331735) 12: (2.00000e+000, 0.84777147) ... (9.98000e+002, 0.31806056) 12: (9.99000e+002, 0.31806056) (1.00000e+003, 0.31806056)] 12: [(3.27854e-318, 2. ) (1.00000e+000, 2.07704612) 12: (2.00000e+000, 2.15294716) ... (9.98000e+002, 2.68506706) 12: (9.99000e+002, 2.68506706) (1.00000e+003, 2.68506706)] 12: [[0.00000000e+00 5.00000000e-01] 12: [1.00000000e+00 5.76988371e-01] 12: [2.00000000e+00 6.52832515e-01] 12: ... 12: [9.98000000e+02 1.18455350e+00] 12: [9.99000000e+02 1.18455350e+00] 12: [1.00000000e+03 1.18455350e+00]] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [3.27854e-318 1.00000e+000 2.00000e+000 ... 9.98000e+002 9.99000e+002 12: 1.00000e+003] 12: [INFO] All tests passed 12/13 Test #12: test_table_streaming_support ..... Passed 11.86 sec test 13 Start 13: test_vec 13: Test command: /usr/bin/python3 "/builddir/build/BUILD/moose-core-3.1.4/tests/python/test_vec.py" 13: Environment variables: 13: PYTHONPATH=/builddir/build/BUILD/moose-core-3.1.4/build/python 13: Test timeout computed to be: 1500 13/13 Test #13: test_vec ......................... Passed 9.53 sec The following tests passed: test_function test_kkit test_ksolve test_moose_paths test_neuroml test_nsdf test_pymoose test_pyrun test_sbml test_snippets test_synchan test_table_streaming_support test_vec 100% tests passed, 0 tests failed out of 13 Total Test time (real) = 245.01 sec + popd ~/build/BUILD/moose-core-3.1.4 + PYTHONPATH=/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/lib64/python3.8/site-packages + /usr/bin/python3 -c 'import moose; element = moose.Neutral("/yyy"); print(element.path)' /yyy[0] + RPM_EC=0 ++ jobs -p + exit 0 Processing files: moose-3.1.4-10.fc33.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.VNa0qC + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + DOCDIR=/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/doc/moose + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/doc/moose + cp -pr README.md /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.SDQdYB + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + LICENSEDIR=/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/licenses/moose + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/licenses/moose + cp -pr LICENSE /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: libmoose.so()(64bit) moose = 3.1.4-10.fc33 moose(riscv-64) = 3.1.4-10.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgsl.so.23()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.103()(64bit) libhdf5_hl.so.100()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libmoose.so()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: python3-moose-3.1.4-10.fc33.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.pgsAYC + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + DOCDIR=/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/doc/moose + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/doc/moose + cp -pr README.md /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/doc/moose + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.0X1F0D + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + LICENSEDIR=/builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/licenses/moose + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/licenses/moose + cp -pr LICENSE /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64/usr/share/licenses/moose + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-moose = 3.1.4-10.fc33 python3-moose = 3.1.4-10.fc33 python3-moose(riscv-64) = 3.1.4-10.fc33 python3.8dist(pymoose) = 3.1.4 python38-moose = 3.1.4-10.fc33 python3dist(pymoose) = 3.1.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libdl.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgsl.so.23()(64bit) libgslcblas.so.0()(64bit) libhdf5.so.103()(64bit) libhdf5_cpp.so.103()(64bit) libhdf5_hl.so.100()(64bit) libhdf5_hl_cpp.so.100()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsz.so.2()(64bit) libz.so.1()(64bit) python(abi) = 3.8 rtld(GNU_HASH) Obsoletes: python-moose < 3.1.4-10.fc33 Processing files: moose-debugsource-3.1.4-10.fc33.riscv64 Provides: moose-debugsource = 3.1.4-10.fc33 moose-debugsource(riscv-64) = 3.1.4-10.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: moose-debuginfo-3.1.4-10.fc33.riscv64 Provides: debuginfo(build-id) = ab2d042bee1c814d08b5c4de816c196c1f7df166 debuginfo(build-id) = ceefd19c9e703fdac15685533436f6a0855f8512 moose-debuginfo = 3.1.4-10.fc33 moose-debuginfo(riscv-64) = 3.1.4-10.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(riscv-64) = 3.1.4-10.fc33 Processing files: python3-moose-debuginfo-3.1.4-10.fc33.riscv64 Provides: debuginfo(build-id) = 661cd2af98816627ddd6311951e0558be6c771c4 python3-moose-debuginfo = 3.1.4-10.fc33 python3-moose-debuginfo(riscv-64) = 3.1.4-10.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: moose-debugsource(riscv-64) = 3.1.4-10.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 Wrote: /builddir/build/RPMS/moose-debugsource-3.1.4-10.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/moose-3.1.4-10.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/python3-moose-3.1.4-10.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/moose-debuginfo-3.1.4-10.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/python3-moose-debuginfo-3.1.4-10.fc33.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.Jz1YfF + umask 022 + cd /builddir/build/BUILD + cd moose-core-3.1.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/moose-3.1.4-10.fc33.riscv64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0